Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0042727.1

Orthogroup ID

OG0009432

Physical Location & Seq

Genomic Coordinates Reverse (-)

709 .. 6492

Gene Structure 5784 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0042727.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2326 bp

cccgaacgcgaggccgtcgccgcacaagtccaagccctcgtcgtcctcctccaccgcgccgtggctgaataagtggccgtctcgcggtgctccctcggagttgccccgccataaggtcaacgatagagtcaaggagtccaagggcggtggagagaagccgagtaatggcgctaggtacgtggacaaggacaaaggccagagcgcgatagagaggatcgtgttccggttgcggaacctggggttaggcgacgaagacgaggaggaggagagcggtgatggtgttgaattggacggtccggattcaatgccggcggcgagcggagaggagaagctcggcgatttgctgcagcgggagtgggtccggccggactatatattggtggaggagaagggcgacgatgacgtggcgctgccgtgggagaaggaggaggaggaggaggaattgagtgaggatgaggaggtgaaggggctgaggagagctcggaggtcgaaggcgccgagcttggctgagctgacgattgaggatgaggagctgaggcgattgaggaggttgggaatgttcctgagggagaggatcagtgtgccgaaagccgggattacgcaggctgtgctggagaagattcatgataagtggaggaaggaggagctggtgaggctcaagtttcatgaggttttggctcatgatatgaagactgctcatgagattgttgagcgtcgaacaggaggtttagttttatggagatcagggagtgtcatggttgtgtaccgtgggattaactacaaaggcccttctaaatccgaacccgttggtagggaaggaaatgctcttttcatcccagatgtttcatcagctgaaactccggtaacaagaagtggcaatgatgtgacttcaactccagataagactgagcaagctgtgaaaattccagcacctcttccgaagatgacagaggaagaagctgaattcaacagcttattggatgaattaggtcctcgttttgttgagtattggggtacaggaatacttcctgttgacgctgatttacttcctaaaacaatcccgggttacaaaacacctttcaggcttcttcctaccgggatgcgatcacggctgactaatgcagagatgactaatttgcggaaacttgctaaatcaattccatgtcattttgcccttgggagaaatagaaatcatcaagggttagcatctgcaatacttaaagtttgggagaaaagttctgtggcgaagattgcagtcaaacgaggtatccagaatacaaacaacaaaataatggctgaggagctgaaggcattaacaggtggtgttttactactcagaaacaaatattacattgtcatttaccgtggaaaggactttatcccaacaagtgtagctgctgctctggctgaaagacaggaactaacgaaacaggttcaagatgtggaagagatagtgcgtgtcaaaccaatagatgcagcttcttcaggtacagaggaaggacaggcacttgcaggaactttggcagagttctacgaggcccaagcccgatggggaagagaaatatctgctgaagaacgtgaaaagatgattgaagaagattcaaaagctaagattgccaggcgtgcaaaacgaattgaacataagctaggcgttgcccaagctaaaaagcttagagcagagagactcctatccaagatagaatcagcaatgcttcctgcaggtcctgattatgatcaggaaaccatcactgatgaggagcgggttatgtttcgcagggttggcttaagaatgaaagcatacttgcctctcggcatacgtggtgtctttgatggtgtcatcgaaaacatgcatttgcattggaagcacagagagctagtgaaattaatatccaaacagaagacccttgcttttgttgaagattcagcccggttgttggaatatgagagcggtggcatactggtggctatagaaagagttcccaaaggatatgctcttatatactatcgtggaaagaattataggcgtcccattaccttgaggccaaggaaccttttaactaaggcgaaggcattgaaacgttcggtggccatgcaacgccatgaggctctcagtcagcacatcggggaattggagaggaccatagagcaaatgagatctgaaattggtatttctgaagatgtagaaaatgagagcacttggacctcaagaaatccccatcagagtggtcatgactcggaatttaaccaaagtgaggatgaagcttctgacatggaatcagatggtagtgacgatgatgaaggctcagattgggaagatgaagattaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000373 GO:0000375 GO:0000377 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016070 GO:0034641 GO:0043170 GO:0044237 GO:0044238 GO:0046483 GO:0071704 GO:0090304 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CRS1_YhbY

Protein Analysis

774

Amino Acids

87.29

Weight (kDa)

5.99

Isoelectric Point (pI)

57.69

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009432)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G18390
fragaria_vesca	FvH4_5g12070 FvH4_5g12070 FvH4_5g12070 FvH4_5g12070
malus_domestica	MD06G1216600.v1.1 MD14G1227100.v1.1
prunus_persica	Prupe.5G221800_v2.0.a1
pyrus_communis	pycom06g19300 pycom14g18850
rosa_chinensis	RchiOBHm_Chr7g0185501
rosa_laevigata	RLG00000004907
rosa_multiflora	Rmu_sc0008223.1_g000008 Rmu_sc0010190.1_g000020 Rmu_sc0042727.1_g000001
rosa_roxburghii	Rroxscaffold_3G00268880
rosa_rugosa	Rorug06G0469800
rosa_samantha	Rh7AG072900 Rh7BG074700 Rh7CG074800 Rh7DG074700
rosa_wichuraiana	Rw7G006220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1710
AccB1I	GGYRCC	1 cut(s)	494
AccBSI	CCGCTC	4 cut(s)	271, 319, 1760, 1948
AccII	CGCG	4 cut(s)	9, 57, 85, 204
AccIII	TCCGGA	1 cut(s)	296
AclI	AACGTT	1 cut(s)	2078
AclWI	GGATC	2 cut(s)	222, 582
AcoI	YGGCCR	3 cut(s)	75, 363, 2086
AcsI	RAATTY	3 cut(s)	922, 963, 2238
AcuI	CTGAAG	4 cut(s)	1326, 1468, 1591, 2194
AcyI	GRCGYC	2 cut(s)	495, 2024
AfaI	GTAC	4 cut(s)	177, 765, 1016, 1490
AfiI	CCNNNNNNNGG	9 cut(s)	61, 84, 113, 165, 591, 811, 1370, 1934, 2252
AflII	CTTAAG	1 cut(s)	1784
AjiI	CACGTC	1 cut(s)	404
AjnI	CCWGG	2 cut(s)	235, 1617
Alw21I	GWGCWC	3 cut(s)	92, 482, 2196
Alw26I	GTCTC	2 cut(s)	85, 1676
AlwI	GGATC	2 cut(s)	222, 582
AlwNI	CAGNNNCTG	1 cut(s)	1725
Ama87I	CYCGRG	1 cut(s)	1061
Aor13HI	TCCGGA	1 cut(s)	296
AoxI	GGCC	8 cut(s)	12, 75, 194, 363, 785, 1537, 2040, 2086
ApeKI	GCWGC	6 cut(s)	344, 347, 410, 1395, 1398, 1476
ApoI	RAATTY	3 cut(s)	922, 963, 2238
AseI	ATTAAT	1 cut(s)	1884
Asp700I	GAANNNNTTC	1 cut(s)	1975
AspLEI	GCGC	5 cut(s)	59, 171, 204, 410, 497
AspS9I	GGNCC	8 cut(s)	294, 359, 786, 990, 1538, 1722, 2137, 2200
AsuC2I	CCSGG	5 cut(s)	593, 1062, 1063, 1097, 1928
AsuHPI	GGTGA	3 cut(s)	285, 473, 662
AvaI	CYCGRG	1 cut(s)	1061
AvaII	GGWCC	6 cut(s)	294, 359, 990, 1722, 2137, 2200
AxyI	CCTNAGG	1 cut(s)	564
BalI	TGGCCA	1 cut(s)	2088
BanI	GGYRCC	1 cut(s)	494
BanII	GRGCYC	1 cut(s)	482
BbsI	GAAGAC	3 cut(s)	259, 696, 1905
Bbv12I	GWGCWC	3 cut(s)	92, 482, 2196
BbvCI	CCTCAGC	3 cut(s)	471, 534, 1297
BbvI	GCAGC	6 cut(s)	331, 359, 397, 1382, 1385, 1488
BccI	CCATC	6 cut(s)	270, 1543, 1752, 1824, 2224, 2274
BceAI	ACGGC	4 cut(s)	44, 62, 398, 1125
BciT130I	CCWGG	2 cut(s)	237, 1619
BciVI	GTATCC	1 cut(s)	1278
BclI	TGATCA	1 cut(s)	1733
BcnI	CCSGG	5 cut(s)	593, 1062, 1063, 1097, 1928
BcoDI	GTCTC	2 cut(s)	85, 1676
BfaI	CTAG	3 cut(s)	172, 1647, 1875
BfmI	CTRYAG	3 cut(s)	345, 1717, 1966
BfoI	RGCGCY	3 cut(s)	172, 411, 498
BfrI	CTTAAG	1 cut(s)	1784
BfuAI	ACCTGC	1 cut(s)	1710
BfuI	GTATCC	1 cut(s)	1278
BglII	AGATCT	1 cut(s)	2154
BisI	GCNGC	8 cut(s)	21, 313, 345, 348, 411, 1396, 1399, 1477
BlpI	GCTNAGC	1 cut(s)	508
BlsI	GCNGC	8 cut(s)	22, 314, 346, 349, 412, 1397, 1400, 1478
Bme1390I	CCNGG	7 cut(s)	237, 593, 1062, 1063, 1097, 1619, 1928
Bme18I	GGWCC	6 cut(s)	294, 359, 990, 1722, 2137, 2200
BmeT110I	CYCGRG	1 cut(s)	1061
BmgBI	CACGTC	1 cut(s)	404
BmgT120I	GGNCC	8 cut(s)	294, 359, 786, 990, 1538, 1722, 2137, 2200
BmiI	GGNNCC	4 cut(s)	234, 360, 496, 2049
BmrFI	CCNGG	7 cut(s)	237, 593, 1062, 1063, 1097, 1619, 1928
BmsI	GCATC	3 cut(s)	1090, 1215, 1463
BpiI	GAAGAC	3 cut(s)	259, 696, 1905
BplI	GAGNNNNNCTC	2 cut(s)	464, 496
BpmI	CTGGAG	2 cut(s)	633, 880
Bpu10I	CCTNAGC	3 cut(s)	471, 534, 1297
Bpu1102I	GCTNAGC	1 cut(s)	508
BpuEI	CTTGAG	3 cut(s)	642, 2057, 2189
BpuMI	CCSGG	5 cut(s)	593, 1062, 1063, 1097, 1928
BsaAI	YACGTR	2 cut(s)	179, 1818
BsaBI	GATNNNNATC	1 cut(s)	1732
BsaHI	GRCGYC	2 cut(s)	495, 2024
BsaWI	WCCGGW	3 cut(s)	223, 296, 860
BsaXI	ACNNNNNCTCC	4 cut(s)	715, 745, 878, 908
Bsc4I	CCNNNNNNNGG	9 cut(s)	61, 84, 113, 165, 591, 811, 1370, 1934, 2252
Bse118I	RCCGGY	1 cut(s)	308
Bse1I	ACTGG	1 cut(s)	1963
Bse21I	CCTNAGG	1 cut(s)	564
Bse3DI	GCAATG	2 cut(s)	884, 1714
Bse8I	GATNNNNATC	1 cut(s)	1732
BseAI	TCCGGA	1 cut(s)	296
BseBI	CCWGG	2 cut(s)	237, 1619
BseGI	GGATG	6 cut(s)	458, 530, 832, 986, 1105, 2261
BseJI	GATNNNNATC	1 cut(s)	1732
BseLI	CCNNNNNNNGG	9 cut(s)	61, 84, 113, 165, 591, 811, 1370, 1934, 2252
BseMI	GCAATG	2 cut(s)	884, 1714
BseMII	CTCAG	9 cut(s)	462, 499, 525, 555, 898, 1288, 1349, 2123, 2317
BseNI	ACTGG	1 cut(s)	1963
BseX3I	CGGCCG	1 cut(s)	363
BseXI	GCAGC	6 cut(s)	331, 359, 397, 1382, 1385, 1488
Bsh1236I	CGCG	4 cut(s)	9, 57, 85, 204
Bsh1285I	CGRYCG	1 cut(s)	366
BshFI	GGCC	8 cut(s)	14, 77, 196, 365, 787, 1539, 2042, 2088
BshNI	GGYRCC	1 cut(s)	494
BsiEI	CGRYCG	1 cut(s)	366
BsiHKAI	GWGCWC	3 cut(s)	92, 482, 2196
BsiHKCI	CYCGRG	1 cut(s)	1061
BslFI	GGGAC	1 cut(s)	2011
BslI	CCNNNNNNNGG	9 cut(s)	61, 84, 113, 165, 591, 811, 1370, 1934, 2252
BsmAI	GTCTC	2 cut(s)	85, 1676
BsmBI	CGTCTC	1 cut(s)	85
BsmFI	GGGAC	1 cut(s)	2011
BsnI	GGCC	8 cut(s)	14, 77, 196, 365, 787, 1539, 2042, 2088
BsoBI	CYCGRG	1 cut(s)	1061
Bsp1286I	GDGCHC	3 cut(s)	92, 482, 2196
Bsp13I	TCCGGA	1 cut(s)	296
Bsp143I	GATC	6 cut(s)	214, 574, 741, 1104, 1733, 2154
Bsp1720I	GCTNAGC	1 cut(s)	508
BspANI	GGCC	8 cut(s)	14, 77, 196, 365, 787, 1539, 2042, 2088
BspCNI	CTCAG	9 cut(s)	463, 500, 526, 556, 899, 1289, 1348, 2122, 2316
BspEI	TCCGGA	1 cut(s)	296
BspFNI	CGCG	4 cut(s)	9, 57, 85, 204
BspHI	TCATGA	5 cut(s)	623, 665, 680, 698, 2228
BspLI	GGNNCC	4 cut(s)	234, 360, 496, 2049
BspMAI	CTGCAG	2 cut(s)	349, 1721
BspMI	ACCTGC	1 cut(s)	1710
BspPI	GGATC	2 cut(s)	222, 582
BspT107I	GGYRCC	1 cut(s)	494
BspTI	CTTAAG	1 cut(s)	1784
BsrBI	CCGCTC	4 cut(s)	271, 319, 1760, 1948
BsrDI	GCAATG	2 cut(s)	884, 1714
BsrFI	RCCGGY	1 cut(s)	308
BsrI	ACTGG	1 cut(s)	1963
BssAI	RCCGGY	1 cut(s)	308
BssMI	GATC	6 cut(s)	214, 574, 741, 1104, 1733, 2154
BssNI	GRCGYC	2 cut(s)	495, 2024
BssT1I	CCWWGG	3 cut(s)	139, 1175, 2043
Bst2UI	CCWGG	2 cut(s)	237, 1619
Bst4CI	ACNGT	3 cut(s)	294, 768, 1365
Bst6I	CTCTTC	3 cut(s)	940, 1441, 1550
BstACI	GRCGYC	2 cut(s)	495, 2024
BstAFI	CTTAAG	1 cut(s)	1784
BstAPI	GCANNNNNTGC	1 cut(s)	608
BstBAI	YACGTR	2 cut(s)	179, 1818
BstC8I	GCNNGC	5 cut(s)	310, 317, 604, 913, 1624
BstDSI	CCRYGG	4 cut(s)	60, 414, 767, 1364
BstF5I	GGATG	6 cut(s)	458, 530, 832, 986, 1105, 2261
BstFNI	CGCG	4 cut(s)	9, 57, 85, 204
BstH2I	RGCGCY	3 cut(s)	172, 411, 498
BstHHI	GCGC	5 cut(s)	59, 171, 204, 410, 497
BstKTI	GATC	6 cut(s)	217, 577, 744, 1107, 1736, 2157
BstMAI	GTCTC	2 cut(s)	85, 1676
BstMBI	GATC	6 cut(s)	214, 574, 741, 1104, 1733, 2154
BstMCI	CGRYCG	1 cut(s)	366
BstNI	CCWGG	2 cut(s)	237, 1619
BstNSI	RCATGY	1 cut(s)	1850
BstSCI	CCNGG	7 cut(s)	235, 591, 1060, 1061, 1095, 1617, 1926
BstSFI	CTRYAG	3 cut(s)	345, 1717, 1966
BstUI	CGCG	4 cut(s)	9, 57, 85, 204
BstV1I	GCAGC	6 cut(s)	331, 359, 397, 1382, 1385, 1488
BstV2I	GAAGAC	3 cut(s)	259, 696, 1905
BstX2I	RGATCY	1 cut(s)	2154
BstXI	CCANNNNNNTGG	1 cut(s)	2223
BstYI	RGATCY	1 cut(s)	2154
BstZI	CGGCCG	1 cut(s)	363
Bsu36I	CCTNAGG	1 cut(s)	564
BsuI	GTATCC	1 cut(s)	1278
BsuRI	GGCC	8 cut(s)	14, 77, 196, 365, 787, 1539, 2042, 2088
BtgI	CCRYGG	4 cut(s)	60, 414, 767, 1364
BtrI	CACGTC	1 cut(s)	404
BtsCI	GGATG	6 cut(s)	458, 530, 832, 986, 1105, 2261
BtsIMutI	CAGTG	2 cut(s)	584, 1747
BveI	ACCTGC	1 cut(s)	1710
Cac8I	GCNNGC	5 cut(s)	310, 317, 604, 913, 1624
CaiI	CAGNNNCTG	1 cut(s)	1725
CciI	TCATGA	5 cut(s)	623, 665, 680, 698, 2228
CfoI	GCGC	5 cut(s)	59, 171, 204, 410, 497
Cfr10I	RCCGGY	1 cut(s)	308
Cfr13I	GGNCC	8 cut(s)	294, 359, 786, 990, 1538, 1722, 2137, 2200
Cfr9I	CCCGGG	1 cut(s)	1061
CpoI	CGGWCCG	1 cut(s)	294
CseI	GACGC	3 cut(s)	702, 1044, 2013
Csp6I	GTAC	4 cut(s)	176, 764, 1015, 1489
CspCI	CAANNNNNGTGG	2 cut(s)	128, 163
CspI	CGGWCCG	1 cut(s)	294
CviQI	GTAC	4 cut(s)	176, 764, 1015, 1489
DinI	GGCGCC	1 cut(s)	496
DpnI	GATC	6 cut(s)	216, 576, 743, 1106, 1735, 2156
DpnII	GATC	6 cut(s)	214, 574, 741, 1104, 1733, 2154
EaeI	YGGCCR	3 cut(s)	75, 363, 2086
EagI	CGGCCG	1 cut(s)	363
Eam1104I	CTCTTC	3 cut(s)	940, 1441, 1550
EarI	CTCTTC	3 cut(s)	940, 1441, 1550
Ecl136II	GAGCTC	1 cut(s)	480
EclXI	CGGCCG	1 cut(s)	363
Eco130I	CCWWGG	3 cut(s)	139, 1175, 2043
Eco24I	GRGCYC	1 cut(s)	482
Eco47I	GGWCC	6 cut(s)	294, 359, 990, 1722, 2137, 2200
Eco52I	CGGCCG	1 cut(s)	363
Eco53kI	GAGCTC	1 cut(s)	480
Eco57I	CTGAAG	4 cut(s)	1326, 1468, 1591, 2194
Eco81I	CCTNAGG	1 cut(s)	564
Eco88I	CYCGRG	1 cut(s)	1061
EcoICRI	GAGCTC	1 cut(s)	480
EcoO109I	RGGNCCY	3 cut(s)	786, 990, 1722
EcoRI	GAATTC	1 cut(s)	963
EcoRII	CCWGG	2 cut(s)	235, 1617
EcoT14I	CCWWGG	3 cut(s)	139, 1175, 2043
EcoT22I	ATGCAT	1 cut(s)	1852
EcoT38I	GRGCYC	1 cut(s)	482
EgeI	GGCGCC	1 cut(s)	496
EheI	GGCGCC	1 cut(s)	496
ErhI	CCWWGG	3 cut(s)	139, 1175, 2043
Esp3I	CGTCTC	1 cut(s)	85
FaqI	GGGAC	1 cut(s)	2011
FauI	CCCGC	3 cut(s)	114, 343, 1753
FbaI	TGATCA	1 cut(s)	1733
Fnu4HI	GCNGC	8 cut(s)	21, 313, 345, 348, 411, 1396, 1399, 1477
FokI	GGATG	6 cut(s)	465, 537, 819, 993, 1112, 2268
FriOI	GRGCYC	1 cut(s)	482
Fsp4HI	GCNGC	8 cut(s)	21, 313, 345, 348, 411, 1396, 1399, 1477
FspBI	CTAG	3 cut(s)	172, 1647, 1875
GlaI	GCGC	5 cut(s)	58, 170, 203, 409, 496
GluI	GCNGC	8 cut(s)	21, 313, 345, 348, 411, 1396, 1399, 1477
GsuI	CTGGAG	2 cut(s)	633, 880
HaeII	RGCGCY	3 cut(s)	172, 411, 498
HaeIII	GGCC	8 cut(s)	14, 77, 196, 365, 787, 1539, 2042, 2088
HgaI	GACGC	3 cut(s)	702, 1044, 2013
HhaI	GCGC	5 cut(s)	59, 171, 204, 410, 497
Hin1I	GRCGYC	2 cut(s)	495, 2024
Hin6I	GCGC	5 cut(s)	57, 169, 202, 408, 495
HinP1I	GCGC	5 cut(s)	57, 169, 202, 408, 495
HincII	GTYRAC	2 cut(s)	119, 1034
HindII	GTYRAC	2 cut(s)	119, 1034
HindIII	AAGCTT	2 cut(s)	1668, 2260
HphI	GGTGA	3 cut(s)	285, 473, 662
Hpy166II	GTNNAC	4 cut(s)	119, 182, 764, 1034
Hpy8I	GTNNAC	4 cut(s)	119, 182, 764, 1034
Hpy99I	CGWCG	5 cut(s)	20, 44, 252, 399, 718
HpyCH4III	ACNGT	3 cut(s)	294, 768, 1365
HpyCH4IV	ACGT	5 cut(s)	178, 403, 1577, 1817, 2078
HpySE526I	ACGT	5 cut(s)	178, 403, 1577, 1817, 2078
Hsp92I	GRCGYC	2 cut(s)	495, 2024
HspAI	GCGC	5 cut(s)	57, 169, 202, 408, 495
KasI	GGCGCC	1 cut(s)	494
Kpn2I	TCCGGA	1 cut(s)	296
KroI	GCCGGC	1 cut(s)	308
KroNI	GCCGGC	1 cut(s)	310
Ksp22I	TGATCA	1 cut(s)	1733
Kzo9I	GATC	6 cut(s)	214, 574, 741, 1104, 1733, 2154
LmnI	GCTCC	5 cut(s)	95, 530, 644, 1301, 1757
Lsp1109I	GCAGC	6 cut(s)	331, 359, 397, 1382, 1385, 1488
LweI	GCATC	3 cut(s)	1090, 1215, 1463
MaeI	CTAG	3 cut(s)	172, 1647, 1875
MaeII	ACGT	5 cut(s)	178, 403, 1577, 1817, 2078
MaeIII	GTNAC	4 cut(s)	863, 884, 1065, 2286
MalI	GATC	6 cut(s)	216, 576, 743, 1106, 1735, 2156
MbiI	CCGCTC	4 cut(s)	271, 319, 1760, 1948
MboI	GATC	6 cut(s)	214, 574, 741, 1104, 1733, 2154
MflI	RGATCY	1 cut(s)	2154
MhlI	GDGCHC	3 cut(s)	92, 482, 2196
MlsI	TGGCCA	1 cut(s)	2088
MluNI	TGGCCA	1 cut(s)	2088
Mly113I	GGCGCC	1 cut(s)	495
MlyI	GAGTC	4 cut(s)	136, 144, 1678, 2226
MmeI	TCCRAC	1 cut(s)	1915
Mox20I	TGGCCA	1 cut(s)	2088
Mph1103I	ATGCAT	1 cut(s)	1852
MroI	TCCGGA	1 cut(s)	296
MroNI	GCCGGC	1 cut(s)	308
MroXI	GAANNNNTTC	1 cut(s)	1975
MscI	TGGCCA	1 cut(s)	2088
MseI	TTAA	8 cut(s)	775, 1219, 1314, 1785, 1884, 2055, 2242, 2324
MslI	CAYNNNNRTG	3 cut(s)	759, 1959, 2221
Msp20I	TGGCCA	1 cut(s)	2088
MspA1I	CMGCKG	2 cut(s)	350, 852
MspCI	CTTAAG	1 cut(s)	1784
MspR9I	CCNGG	7 cut(s)	237, 593, 1062, 1063, 1097, 1619, 1928
MvaI	CCWGG	2 cut(s)	237, 1619
MvnI	CGCG	4 cut(s)	9, 57, 85, 204
NaeI	GCCGGC	1 cut(s)	310
NarI	GGCGCC	1 cut(s)	495
NciI	CCSGG	5 cut(s)	593, 1062, 1063, 1097, 1928
NdeII	GATC	6 cut(s)	214, 574, 741, 1104, 1733, 2154
NgoMIV	GCCGGC	1 cut(s)	308
NlaIV	GGNNCC	4 cut(s)	234, 360, 496, 2049
NmeAIII	GCCGAG	4 cut(s)	184, 313, 523, 1789
NmuCI	GTSAC	2 cut(s)	884, 2286
NsiI	ATGCAT	1 cut(s)	1852
NspI	RCATGY	1 cut(s)	1850
PagI	TCATGA	5 cut(s)	623, 665, 680, 698, 2228
PcsI	WCGNNNNNNNCGW	1 cut(s)	495
PdiI	GCCGGC	1 cut(s)	310
PdmI	GAANNNNTTC	1 cut(s)	1975
PfeI	GAWTC	6 cut(s)	300, 620, 1599, 1701, 1920, 2274
PkrI	GCNGC	8 cut(s)	22, 314, 346, 349, 412, 1397, 1400, 1478
PleI	GAGTC	4 cut(s)	135, 143, 1678, 2226
PluTI	GGCGCC	1 cut(s)	498
PpsI	GAGTC	4 cut(s)	135, 143, 1678, 2226
Ppu21I	YACGTR	2 cut(s)	179, 1818
PpuMI	RGGWCCY	2 cut(s)	990, 1722
PshBI	ATTAAT	1 cut(s)	1884
Psp124BI	GAGCTC	1 cut(s)	482
Psp1406I	AACGTT	1 cut(s)	2078
Psp5II	RGGWCCY	2 cut(s)	990, 1722
Psp6I	CCWGG	2 cut(s)	235, 1617
PspGI	CCWGG	2 cut(s)	235, 1617
PspN4I	GGNNCC	4 cut(s)	234, 360, 496, 2049
PspPI	GGNCC	8 cut(s)	294, 359, 786, 990, 1538, 1722, 2137, 2200
PspPPI	RGGWCCY	2 cut(s)	990, 1722
PstI	CTGCAG	2 cut(s)	349, 1721
PstNI	CAGNNNCTG	1 cut(s)	1725
PsuI	RGATCY	1 cut(s)	2154
PvuII	CAGCTG	1 cut(s)	852
RsaI	GTAC	4 cut(s)	177, 765, 1016, 1490
RsaNI	GTAC	4 cut(s)	176, 764, 1015, 1489
RseI	CAYNNNNRTG	3 cut(s)	759, 1959, 2221
Rsr2I	CGGWCCG	1 cut(s)	294
RsrII	CGGWCCG	1 cut(s)	294
SacI	GAGCTC	1 cut(s)	482
SaqAI	TTAA	8 cut(s)	775, 1219, 1314, 1785, 1884, 2055, 2242, 2324
SatI	GCNGC	8 cut(s)	21, 313, 345, 348, 411, 1396, 1399, 1477
Sau3AI	GATC	6 cut(s)	214, 574, 741, 1104, 1733, 2154
Sau96I	GGNCC	8 cut(s)	294, 359, 786, 990, 1538, 1722, 2137, 2200
SbfI	CCTGCAGG	1 cut(s)	1721
SchI	GAGTC	4 cut(s)	136, 144, 1678, 2226
ScrFI	CCNGG	7 cut(s)	237, 593, 1062, 1063, 1097, 1619, 1928
SdaI	CCTGCAGG	1 cut(s)	1721
SduI	GDGCHC	3 cut(s)	92, 482, 2196
SfaNI	GCATC	3 cut(s)	1090, 1215, 1463
SfcI	CTRYAG	3 cut(s)	345, 1717, 1966
SfoI	GGCGCC	1 cut(s)	496
SinI	GGWCC	6 cut(s)	294, 359, 990, 1722, 2137, 2200
SmaI	CCCGGG	1 cut(s)	1063
SmiMI	CAYNNNNRTG	3 cut(s)	759, 1959, 2221
SmlI	CTYRAG	4 cut(s)	657, 1784, 2036, 2204
SmoI	CTYRAG	4 cut(s)	657, 1784, 2036, 2204
Sse8387I	CCTGCAGG	1 cut(s)	1721
SspDI	GGCGCC	1 cut(s)	494
SspI	AATATT	1 cut(s)	1347
SspMI	CTAG	3 cut(s)	172, 1647, 1875
SstI	GAGCTC	1 cut(s)	482
StyD4I	CCNGG	7 cut(s)	235, 591, 1060, 1061, 1095, 1617, 1926
StyI	CCWWGG	3 cut(s)	139, 1175, 2043
TaaI	ACNGT	3 cut(s)	294, 768, 1365
TaiI	ACGT	5 cut(s)	181, 406, 1580, 1820, 2081
TaqI	TCGA	3 cut(s)	489, 716, 1840
TauI	GCSGC	2 cut(s)	23, 315
TfiI	GAWTC	6 cut(s)	300, 620, 1599, 1701, 1920, 2274
Tru1I	TTAA	8 cut(s)	775, 1219, 1314, 1785, 1884, 2055, 2242, 2324
Tru9I	TTAA	8 cut(s)	775, 1219, 1314, 1785, 1884, 2055, 2242, 2324
TscAI	CASTG	2 cut(s)	584, 1754
TseFI	GTSAC	2 cut(s)	884, 2286
TseI	GCWGC	6 cut(s)	344, 347, 410, 1395, 1398, 1476
Tsp45I	GTSAC	2 cut(s)	884, 2286
TspDTI	ATGAA	9 cut(s)	612, 654, 702, 821, 835, 997, 1806, 2272, 2311
TspMI	CCCGGG	1 cut(s)	1061
TspRI	CASTG	2 cut(s)	584, 1754
Vha464I	CTTAAG	1 cut(s)	1784
VpaK11BI	GGWCC	6 cut(s)	294, 359, 990, 1722, 2137, 2200
VspI	ATTAAT	1 cut(s)	1884
XapI	RAATTY	3 cut(s)	922, 963, 2238
XceI	RCATGY	1 cut(s)	1850
XmaI	CCCGGG	1 cut(s)	1061
XmnI	GAANNNNTTC	1 cut(s)	1975
XspI	CTAG	3 cut(s)	172, 1647, 1875
Zsp2I	ATGCAT	1 cut(s)	1852

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.