Component of the post-replicative DNA mismatch repair system (MMR)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G18524 |
| fragaria_vesca | FvH4_5g12700 FvH4_5g12700 FvH4_5g12700 FvH4_5g12700 FvH4_5g12700 FvH4_5g12700 |
| malus_domestica | MD06G1211200.v1.1 MD14G1221900.v1.1 |
| prunus_persica | Prupe.5G217300_v2.0.a1 Prupe.5G217300_v2.0.a1 |
| pyrus_communis | pycom06g18850 pycom14g18350 |
| rosa_chinensis | RchiOBHm_Chr7g0184631 |
| rosa_laevigata | RLG00000004964 |
| rosa_multiflora | Rmu_co8151106.1_g000001 Rmu_co8372741.1_g000001 Rmu_sc0009731.1_g000001 Rmu_sc0030268.1_g000001 Rmu_ssc0000289.1_g000029 |
| rosa_roxburghii | Rroxscaffold_3G00269470 |
| rosa_samantha | Rh7AG078900 Rh7BG068400 Rh7CG069200 Rh7DG068500 |
| rosa_wichuraiana | Rw7G005640 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 1154 |
| AccI | GTMKAC | 1 cut(s) | 1506 |
| AccIII | TCCGGA | 1 cut(s) | 34 |
| AciI | CCGC | 9 cut(s) | 330, 538, 856, 873, 984, 2029, 2187, 2443, 2510 |
| AclWI | GGATC | 5 cut(s) | 288, 340, 1113, 1565, 2636 |
| AcsI | RAATTY | 5 cut(s) | 157, 946, 1259, 1936, 2513 |
| AcuI | CTGAAG | 4 cut(s) | 1040, 1142, 1484, 1537 |
| AfaI | GTAC | 4 cut(s) | 982, 1250, 1679, 1890 |
| AfeI | AGCGCT | 1 cut(s) | 2422 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 648, 791, 2006 |
| AflII | CTTAAG | 1 cut(s) | 716 |
| AflIII | ACRYGT | 2 cut(s) | 258, 977 |
| AjnI | CCWGG | 5 cut(s) | 288, 364, 642, 2031, 2473 |
| Alw21I | GWGCWC | 4 cut(s) | 1355, 1722, 2320, 2677 |
| AlwI | GGATC | 5 cut(s) | 288, 340, 1113, 1565, 2636 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1120, 2809 |
| Ama87I | CYCGRG | 2 cut(s) | 212, 1160 |
| Aor13HI | TCCGGA | 1 cut(s) | 34 |
| Aor51HI | AGCGCT | 1 cut(s) | 2422 |
| AoxI | GGCC | 5 cut(s) | 480, 1853, 1997, 2478, 2541 |
| ApeKI | GCWGC | 7 cut(s) | 896, 1453, 1532, 1826, 2561, 2699, 2780 |
| ApoI | RAATTY | 5 cut(s) | 157, 946, 1259, 1936, 2513 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 2099, 2131, 2477, 2509 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 260 |
| AspLEI | GCGC | 5 cut(s) | 578, 1155, 1537, 2207, 2423 |
| AspS9I | GGNCC | 4 cut(s) | 1672, 1997, 2478, 2542 |
| AsuC2I | CCSGG | 1 cut(s) | 766 |
| AsuHPI | GGTGA | 7 cut(s) | 164, 535, 739, 1313, 1855, 1945, 2443 |
| AsuII | TTCGAA | 1 cut(s) | 264 |
| AvaI | CYCGRG | 2 cut(s) | 212, 1160 |
| AvaII | GGWCC | 1 cut(s) | 1672 |
| BanII | GRGCYC | 2 cut(s) | 1722, 2677 |
| BauI | CACGAG | 2 cut(s) | 683, 1031 |
| BbsI | GAAGAC | 2 cut(s) | 549, 1543 |
| Bbv12I | GWGCWC | 4 cut(s) | 1355, 1722, 2320, 2677 |
| BbvI | GCAGC | 7 cut(s) | 908, 1465, 1544, 1813, 2548, 2711, 2767 |
| BccI | CCATC | 6 cut(s) | 452, 472, 913, 985, 2047, 2258 |
| BceAI | ACGGC | 1 cut(s) | 641 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 254, 288, 786, 820 |
| BciT130I | CCWGG | 5 cut(s) | 290, 366, 644, 2033, 2475 |
| BciVI | GTATCC | 1 cut(s) | 772 |
| BclI | TGATCA | 1 cut(s) | 301 |
| BcnI | CCSGG | 1 cut(s) | 766 |
| BfaI | CTAG | 9 cut(s) | 276, 498, 515, 572, 791, 1373, 1892, 2208, 2768 |
| BfmI | CTRYAG | 6 cut(s) | 309, 894, 1356, 1849, 2562, 2781 |
| BfoI | RGCGCY | 2 cut(s) | 2208, 2424 |
| BfrI | CTTAAG | 1 cut(s) | 716 |
| BfuI | GTATCC | 1 cut(s) | 772 |
| BglII | AGATCT | 2 cut(s) | 712, 1360 |
| BisI | GCNGC | 9 cut(s) | 538, 897, 1454, 1533, 1827, 2443, 2562, 2700, 2781 |
| BlsI | GCNGC | 9 cut(s) | 539, 898, 1455, 1534, 1828, 2444, 2563, 2701, 2782 |
| Bme1390I | CCNGG | 6 cut(s) | 290, 366, 644, 766, 2033, 2475 |
| Bme18I | GGWCC | 1 cut(s) | 1672 |
| BmeT110I | CYCGRG | 2 cut(s) | 212, 1160 |
| BmgT120I | GGNCC | 4 cut(s) | 1672, 1997, 2478, 2542 |
| BmiI | GGNNCC | 3 cut(s) | 1673, 2068, 2479 |
| BmrFI | CCNGG | 6 cut(s) | 290, 366, 644, 766, 2033, 2475 |
| BmrI | ACTGGG | 1 cut(s) | 1676 |
| BmuI | ACTGGG | 1 cut(s) | 1676 |
| BpiI | GAAGAC | 2 cut(s) | 549, 1543 |
| BpmI | CTGGAG | 6 cut(s) | 311, 572, 665, 1469, 1637, 1899 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2798 |
| Bpu14I | TTCGAA | 1 cut(s) | 264 |
| BpuEI | CTTGAG | 5 cut(s) | 48, 1319, 1908, 2043, 2349 |
| BpuMI | CCSGG | 1 cut(s) | 766 |
| Bsa29I | ATCGAT | 3 cut(s) | 1338, 2192, 2232 |
| BsaBI | GATNNNNATC | 3 cut(s) | 711, 1317, 2228 |
| BsaI | GGTCTC | 2 cut(s) | 968, 2386 |
| BsaJI | CCNNGG | 4 cut(s) | 642, 1324, 2358, 2474 |
| BsaWI | WCCGGW | 2 cut(s) | 34, 1253 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 346, 376, 545, 575, 1872, 1902 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 648, 791, 2006 |
| Bse1I | ACTGG | 5 cut(s) | 425, 1671, 1675, 1830, 2798 |
| Bse3DI | GCAATG | 1 cut(s) | 168 |
| Bse8I | GATNNNNATC | 3 cut(s) | 711, 1317, 2228 |
| BseAI | TCCGGA | 1 cut(s) | 34 |
| BseBI | CCWGG | 5 cut(s) | 290, 366, 644, 2033, 2475 |
| BseCI | ATCGAT | 3 cut(s) | 1338, 2192, 2232 |
| BseDI | CCNNGG | 4 cut(s) | 642, 1324, 2358, 2474 |
| BseGI | GGATG | 8 cut(s) | 55, 483, 996, 1699, 1804, 1879, 1906, 2025 |
| BseJI | GATNNNNATC | 3 cut(s) | 711, 1317, 2228 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 648, 791, 2006 |
| BseMI | GCAATG | 1 cut(s) | 168 |
| BseMII | CTCAG | 5 cut(s) | 510, 1146, 1749, 2367, 2812 |
| BseNI | ACTGG | 5 cut(s) | 425, 1671, 1675, 1830, 2798 |
| BseRI | GAGGAG | 2 cut(s) | 2578, 2624 |
| BseXI | GCAGC | 7 cut(s) | 908, 1465, 1544, 1813, 2548, 2711, 2767 |
| BseYI | CCCAGC | 2 cut(s) | 1091, 1778 |
| BshFI | GGCC | 5 cut(s) | 482, 1855, 1999, 2480, 2543 |
| BshVI | ATCGAT | 3 cut(s) | 1338, 2192, 2232 |
| BsiHKAI | GWGCWC | 4 cut(s) | 1355, 1722, 2320, 2677 |
| BsiHKCI | CYCGRG | 2 cut(s) | 212, 1160 |
| BsiSI | CCGG | 4 cut(s) | 35, 606, 765, 1254 |
| BslFI | GGGAC | 1 cut(s) | 1685 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 648, 791, 2006 |
| BsmFI | GGGAC | 1 cut(s) | 1685 |
| BsmI | GAATGC | 2 cut(s) | 590, 626 |
| BsnI | GGCC | 5 cut(s) | 482, 1855, 1999, 2480, 2543 |
| Bso31I | GGTCTC | 2 cut(s) | 968, 2386 |
| BsoBI | CYCGRG | 2 cut(s) | 212, 1160 |
| Bsp119I | TTCGAA | 1 cut(s) | 264 |
| Bsp1286I | GDGCHC | 4 cut(s) | 1355, 1722, 2320, 2677 |
| Bsp13I | TCCGGA | 1 cut(s) | 34 |
| BspACI | CCGC | 9 cut(s) | 330, 538, 856, 873, 984, 2029, 2187, 2443, 2510 |
| BspANI | GGCC | 5 cut(s) | 482, 1855, 1999, 2480, 2543 |
| BspCNI | CTCAG | 5 cut(s) | 511, 1145, 1750, 2368, 2811 |
| BspDI | ATCGAT | 3 cut(s) | 1338, 2192, 2232 |
| BspEI | TCCGGA | 1 cut(s) | 34 |
| BspHI | TCATGA | 3 cut(s) | 879, 966, 1962 |
| BspLI | GGNNCC | 3 cut(s) | 1673, 2068, 2479 |
| BspMAI | CTGCAG | 3 cut(s) | 898, 2566, 2785 |
| BspPI | GGATC | 5 cut(s) | 288, 340, 1113, 1565, 2636 |
| BspQI | GCTCTTC | 1 cut(s) | 1566 |
| BspT104I | TTCGAA | 1 cut(s) | 264 |
| BspTI | CTTAAG | 1 cut(s) | 716 |
| BspTNI | GGTCTC | 2 cut(s) | 968, 2386 |
| BsrDI | GCAATG | 1 cut(s) | 168 |
| BsrI | ACTGG | 5 cut(s) | 425, 1671, 1675, 1830, 2798 |
| BssECI | CCNNGG | 4 cut(s) | 642, 1324, 2358, 2474 |
| BssSI | CACGAG | 2 cut(s) | 683, 1031 |
| BssT1I | CCWWGG | 2 cut(s) | 1324, 2358 |
| Bst2BI | CACGAG | 2 cut(s) | 683, 1031 |
| Bst2UI | CCWGG | 5 cut(s) | 290, 366, 644, 2033, 2475 |
| Bst4CI | ACNGT | 6 cut(s) | 310, 1248, 1605, 1744, 1850, 2395 |
| Bst6I | CTCTTC | 6 cut(s) | 691, 1165, 1566, 1873, 1967, 2615 |
| BstAFI | CTTAAG | 1 cut(s) | 716 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2176 |
| BstBI | TTCGAA | 1 cut(s) | 264 |
| BstC8I | GCNNGC | 3 cut(s) | 60, 2134, 2673 |
| BstDEI | CTNAG | 7 cut(s) | 519, 1109, 1132, 1758, 1774, 2376, 2798 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 789 |
| BstF5I | GGATG | 8 cut(s) | 55, 483, 996, 1699, 1804, 1879, 1906, 2025 |
| BstH2I | RGCGCY | 2 cut(s) | 2208, 2424 |
| BstHHI | GCGC | 5 cut(s) | 578, 1155, 1537, 2207, 2423 |
| BstNI | CCWGG | 5 cut(s) | 290, 366, 644, 2033, 2475 |
| BstNSI | RCATGY | 3 cut(s) | 262, 981, 1550 |
| BstSCI | CCNGG | 6 cut(s) | 288, 364, 642, 764, 2031, 2473 |
| BstSFI | CTRYAG | 6 cut(s) | 309, 894, 1356, 1849, 2562, 2781 |
| BstV1I | GCAGC | 7 cut(s) | 908, 1465, 1544, 1813, 2548, 2711, 2767 |
| BstV2I | GAAGAC | 2 cut(s) | 549, 1543 |
| BstX2I | RGATCY | 4 cut(s) | 280, 712, 1105, 1360 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 2150, 2495 |
| BstYI | RGATCY | 4 cut(s) | 280, 712, 1105, 1360 |
| Bsu15I | ATCGAT | 3 cut(s) | 1338, 2192, 2232 |
| BsuI | GTATCC | 1 cut(s) | 772 |
| BsuRI | GGCC | 5 cut(s) | 482, 1855, 1999, 2480, 2543 |
| BsuTUI | ATCGAT | 3 cut(s) | 1338, 2192, 2232 |
| BtsCI | GGATG | 8 cut(s) | 55, 483, 996, 1699, 1804, 1879, 1906, 2025 |
| BtsI | GCAGTG | 1 cut(s) | 195 |
| BtsIMutI | CAGTG | 6 cut(s) | 195, 1079, 2219, 2391, 2433, 2791 |
| Cac8I | GCNNGC | 3 cut(s) | 60, 2134, 2673 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1120, 2809 |
| CciI | TCATGA | 3 cut(s) | 879, 966, 1962 |
| CfoI | GCGC | 5 cut(s) | 578, 1155, 1537, 2207, 2423 |
| Cfr13I | GGNCC | 4 cut(s) | 1672, 1997, 2478, 2542 |
| ClaI | ATCGAT | 3 cut(s) | 1338, 2192, 2232 |
| CseI | GACGC | 1 cut(s) | 2524 |
| Csp6I | GTAC | 4 cut(s) | 981, 1249, 1678, 1889 |
| CviQI | GTAC | 4 cut(s) | 981, 1249, 1678, 1889 |
| DdeI | CTNAG | 7 cut(s) | 519, 1109, 1132, 1758, 1774, 2376, 2798 |
| Eam1104I | CTCTTC | 6 cut(s) | 691, 1165, 1566, 1873, 1967, 2615 |
| EarI | CTCTTC | 6 cut(s) | 691, 1165, 1566, 1873, 1967, 2615 |
| EciI | GGCGGA | 3 cut(s) | 888, 2018, 2525 |
| Ecl136II | GAGCTC | 2 cut(s) | 1720, 2675 |
| Eco130I | CCWWGG | 2 cut(s) | 1324, 2358 |
| Eco24I | GRGCYC | 2 cut(s) | 1722, 2677 |
| Eco31I | GGTCTC | 2 cut(s) | 968, 2386 |
| Eco32I | GATATC | 1 cut(s) | 1395 |
| Eco47I | GGWCC | 1 cut(s) | 1672 |
| Eco47III | AGCGCT | 1 cut(s) | 2422 |
| Eco53kI | GAGCTC | 2 cut(s) | 1720, 2675 |
| Eco57I | CTGAAG | 4 cut(s) | 1040, 1142, 1484, 1537 |
| Eco88I | CYCGRG | 2 cut(s) | 212, 1160 |
| EcoICRI | GAGCTC | 2 cut(s) | 1720, 2675 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 789 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1997, 2478 |
| EcoRI | GAATTC | 1 cut(s) | 1259 |
| EcoRII | CCWGG | 5 cut(s) | 288, 364, 642, 2031, 2473 |
| EcoRV | GATATC | 1 cut(s) | 1395 |
| EcoT14I | CCWWGG | 2 cut(s) | 1324, 2358 |
| EcoT22I | ATGCAT | 1 cut(s) | 590 |
| EcoT38I | GRGCYC | 2 cut(s) | 1722, 2677 |
| ErhI | CCWWGG | 2 cut(s) | 1324, 2358 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 1308, 1340, 2163, 2195, 2721, 2753 |
| FaqI | GGGAC | 1 cut(s) | 1685 |
| FauNDI | CATATG | 1 cut(s) | 1011 |
| FbaI | TGATCA | 1 cut(s) | 301 |
| FblI | GTMKAC | 1 cut(s) | 1506 |
| Fnu4HI | GCNGC | 9 cut(s) | 538, 897, 1454, 1533, 1827, 2443, 2562, 2700, 2781 |
| FokI | GGATG | 8 cut(s) | 62, 490, 1003, 1706, 1811, 1886, 1893, 2012 |
| FriOI | GRGCYC | 2 cut(s) | 1722, 2677 |
| Fsp4HI | GCNGC | 9 cut(s) | 538, 897, 1454, 1533, 1827, 2443, 2562, 2700, 2781 |
| FspBI | CTAG | 9 cut(s) | 276, 498, 515, 572, 791, 1373, 1892, 2208, 2768 |
| FspI | TGCGCA | 1 cut(s) | 1154 |
| GlaI | GCGC | 5 cut(s) | 577, 1154, 1536, 2206, 2422 |
| GluI | GCNGC | 9 cut(s) | 538, 897, 1454, 1533, 1827, 2443, 2562, 2700, 2781 |
| GsaI | CCCAGC | 2 cut(s) | 1095, 1782 |
| GsuI | CTGGAG | 6 cut(s) | 311, 572, 665, 1469, 1637, 1899 |
| HaeII | RGCGCY | 2 cut(s) | 2208, 2424 |
| HaeIII | GGCC | 5 cut(s) | 482, 1855, 1999, 2480, 2543 |
| HapII | CCGG | 4 cut(s) | 35, 606, 765, 1254 |
| HgaI | GACGC | 1 cut(s) | 2524 |
| HhaI | GCGC | 5 cut(s) | 578, 1155, 1537, 2207, 2423 |
| Hin6I | GCGC | 5 cut(s) | 576, 1153, 1535, 2205, 2421 |
| HinP1I | GCGC | 5 cut(s) | 576, 1153, 1535, 2205, 2421 |
| HincII | GTYRAC | 3 cut(s) | 1209, 1507, 2160 |
| HindII | GTYRAC | 3 cut(s) | 1209, 1507, 2160 |
| HindIII | AAGCTT | 4 cut(s) | 29, 379, 1295, 1810 |
| HpaII | CCGG | 4 cut(s) | 35, 606, 765, 1254 |
| HphI | GGTGA | 7 cut(s) | 164, 535, 739, 1313, 1855, 1945, 2443 |
| Hpy166II | GTNNAC | 6 cut(s) | 1209, 1251, 1507, 1644, 2019, 2160 |
| Hpy8I | GTNNAC | 6 cut(s) | 1209, 1251, 1507, 1644, 2019, 2160 |
| Hpy99I | CGWCG | 1 cut(s) | 2540 |
| HpyAV | CCTTC | 4 cut(s) | 724, 1234, 1561, 1889 |
| HpyCH4III | ACNGT | 6 cut(s) | 310, 1248, 1605, 1744, 1850, 2395 |
| HpyCH4IV | ACGT | 1 cut(s) | 205 |
| HpyF3I | CTNAG | 7 cut(s) | 519, 1109, 1132, 1758, 1774, 2376, 2798 |
| HpySE526I | ACGT | 1 cut(s) | 205 |
| HspAI | GCGC | 5 cut(s) | 576, 1153, 1535, 2205, 2421 |
| Kpn2I | TCCGGA | 1 cut(s) | 34 |
| Ksp22I | TGATCA | 1 cut(s) | 301 |
| LguI | GCTCTTC | 1 cut(s) | 1566 |
| LmnI | GCTCC | 7 cut(s) | 37, 292, 1450, 1704, 1717, 2129, 2722 |
| Lsp1109I | GCAGC | 7 cut(s) | 908, 1465, 1544, 1813, 2548, 2711, 2767 |
| MaeI | CTAG | 9 cut(s) | 276, 498, 515, 572, 791, 1373, 1892, 2208, 2768 |
| MaeII | ACGT | 1 cut(s) | 205 |
| MaeIII | GTNAC | 7 cut(s) | 1179, 1744, 1782, 1990, 2217, 2387, 2483 |
| MflI | RGATCY | 4 cut(s) | 280, 712, 1105, 1360 |
| MhlI | GDGCHC | 4 cut(s) | 1355, 1722, 2320, 2677 |
| MlyI | GAGTC | 5 cut(s) | 563, 775, 884, 1615, 1953 |
| Mph1103I | ATGCAT | 1 cut(s) | 590 |
| MroI | TCCGGA | 1 cut(s) | 34 |
| MroXI | GAANNNNTTC | 1 cut(s) | 260 |
| MseI | TTAA | 7 cut(s) | 717, 1050, 1097, 1194, 1518, 1808, 2727 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1911, 2343 |
| MspA1I | CMGCKG | 1 cut(s) | 599 |
| MspCI | CTTAAG | 1 cut(s) | 716 |
| MspI | CCGG | 4 cut(s) | 35, 606, 765, 1254 |
| MspR9I | CCNGG | 6 cut(s) | 290, 366, 644, 766, 2033, 2475 |
| Mva1269I | GAATGC | 2 cut(s) | 590, 626 |
| MvaI | CCWGG | 5 cut(s) | 290, 366, 644, 2033, 2475 |
| NciI | CCSGG | 1 cut(s) | 766 |
| NdeI | CATATG | 1 cut(s) | 1011 |
| NlaIV | GGNNCC | 3 cut(s) | 1673, 2068, 2479 |
| NmuCI | GTSAC | 2 cut(s) | 2217, 2483 |
| NsbI | TGCGCA | 1 cut(s) | 1154 |
| NsiI | ATGCAT | 1 cut(s) | 590 |
| NspI | RCATGY | 3 cut(s) | 262, 981, 1550 |
| NspV | TTCGAA | 1 cut(s) | 264 |
| PaeR7I | CTCGAG | 1 cut(s) | 1160 |
| PagI | TCATGA | 3 cut(s) | 879, 966, 1962 |
| PciI | ACATGT | 2 cut(s) | 258, 977 |
| PciSI | GCTCTTC | 1 cut(s) | 1566 |
| PctI | GAATGC | 2 cut(s) | 590, 626 |
| PdmI | GAANNNNTTC | 1 cut(s) | 260 |
| PfeI | GAWTC | 9 cut(s) | 117, 602, 638, 707, 876, 1128, 1459, 2500, 2732 |
| PfoI | TCCNGGA | 2 cut(s) | 288, 364 |
| PkrI | GCNGC | 9 cut(s) | 539, 898, 1455, 1534, 1828, 2444, 2563, 2701, 2782 |
| PleI | GAGTC | 5 cut(s) | 562, 775, 884, 1615, 1953 |
| PpsI | GAGTC | 5 cut(s) | 562, 775, 884, 1615, 1953 |
| PscI | ACATGT | 2 cut(s) | 258, 977 |
| Psp124BI | GAGCTC | 2 cut(s) | 1722, 2677 |
| Psp6I | CCWGG | 5 cut(s) | 288, 364, 642, 2031, 2473 |
| PspFI | CCCAGC | 2 cut(s) | 1091, 1778 |
| PspGI | CCWGG | 5 cut(s) | 288, 364, 642, 2031, 2473 |
| PspN4I | GGNNCC | 3 cut(s) | 1673, 2068, 2479 |
| PspPI | GGNCC | 4 cut(s) | 1672, 1997, 2478, 2542 |
| PstI | CTGCAG | 3 cut(s) | 898, 2566, 2785 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1120, 2809 |
| PsuI | RGATCY | 4 cut(s) | 280, 712, 1105, 1360 |
| PvuII | CAGCTG | 1 cut(s) | 599 |
| RsaI | GTAC | 4 cut(s) | 982, 1250, 1679, 1890 |
| RsaNI | GTAC | 4 cut(s) | 981, 1249, 1678, 1889 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1911, 2343 |
| SacI | GAGCTC | 2 cut(s) | 1722, 2677 |
| SalI | GTCGAC | 1 cut(s) | 1505 |
| SapI | GCTCTTC | 1 cut(s) | 1566 |
| SaqAI | TTAA | 7 cut(s) | 717, 1050, 1097, 1194, 1518, 1808, 2727 |
| SatI | GCNGC | 9 cut(s) | 538, 897, 1454, 1533, 1827, 2443, 2562, 2700, 2781 |
| Sau96I | GGNCC | 4 cut(s) | 1672, 1997, 2478, 2542 |
| SchI | GAGTC | 5 cut(s) | 563, 775, 884, 1615, 1953 |
| ScrFI | CCNGG | 6 cut(s) | 290, 366, 644, 766, 2033, 2475 |
| SduI | GDGCHC | 4 cut(s) | 1355, 1722, 2320, 2677 |
| SfcI | CTRYAG | 6 cut(s) | 309, 894, 1356, 1849, 2562, 2781 |
| Sfr274I | CTCGAG | 1 cut(s) | 1160 |
| SfuI | TTCGAA | 1 cut(s) | 264 |
| SinI | GGWCC | 1 cut(s) | 1672 |
| SlaI | CTCGAG | 1 cut(s) | 1160 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1911, 2343 |
| SmlI | CTYRAG | 7 cut(s) | 63, 716, 1160, 1298, 1923, 2058, 2364 |
| SmoI | CTYRAG | 7 cut(s) | 63, 716, 1160, 1298, 1923, 2058, 2364 |
| SsiI | CCGC | 9 cut(s) | 330, 538, 856, 873, 984, 2029, 2187, 2443, 2510 |
| SspI | AATATT | 1 cut(s) | 739 |
| SspMI | CTAG | 9 cut(s) | 276, 498, 515, 572, 791, 1373, 1892, 2208, 2768 |
| SstI | GAGCTC | 2 cut(s) | 1722, 2677 |
| StyD4I | CCNGG | 6 cut(s) | 288, 364, 642, 764, 2031, 2473 |
| StyI | CCWWGG | 2 cut(s) | 1324, 2358 |
| TaaI | ACNGT | 6 cut(s) | 310, 1248, 1605, 1744, 1850, 2395 |
| TaiI | ACGT | 1 cut(s) | 208 |
| TaqI | TCGA | 8 cut(s) | 15, 264, 335, 1161, 1338, 1506, 2192, 2232 |
| TatI | WGTACW | 2 cut(s) | 1248, 1888 |
| TauI | GCSGC | 2 cut(s) | 540, 2445 |
| TfiI | GAWTC | 9 cut(s) | 117, 602, 638, 707, 876, 1128, 1459, 2500, 2732 |
| Tru1I | TTAA | 7 cut(s) | 717, 1050, 1097, 1194, 1518, 1808, 2727 |
| Tru9I | TTAA | 7 cut(s) | 717, 1050, 1097, 1194, 1518, 1808, 2727 |
| TscAI | CASTG | 6 cut(s) | 202, 1079, 2226, 2398, 2440, 2798 |
| TseFI | GTSAC | 2 cut(s) | 2217, 2483 |
| TseI | GCWGC | 7 cut(s) | 896, 1453, 1532, 1826, 2561, 2699, 2780 |
| Tsp45I | GTSAC | 2 cut(s) | 2217, 2483 |
| TspGWI | ACGGA | 1 cut(s) | 1647 |
| TspRI | CASTG | 6 cut(s) | 202, 1079, 2226, 2398, 2440, 2798 |
| Vha464I | CTTAAG | 1 cut(s) | 716 |
| VpaK11BI | GGWCC | 1 cut(s) | 1672 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 789 |
| XapI | RAATTY | 5 cut(s) | 157, 946, 1259, 1936, 2513 |
| XceI | RCATGY | 3 cut(s) | 262, 981, 1550 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1376 |
| XhoI | CTCGAG | 1 cut(s) | 1160 |
| XmiI | GTMKAC | 1 cut(s) | 1506 |
| XmnI | GAANNNNTTC | 1 cut(s) | 260 |
| XspI | CTAG | 9 cut(s) | 276, 498, 515, 572, 791, 1373, 1892, 2208, 2768 |
| Zsp2I | ATGCAT | 1 cut(s) | 590 |