Kinase interacting
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G22790 AT3G22790 AT3G22790 AT4G14760 AT4G14760 AT4G14760 AT4G14760 |
| fragaria_vesca | FvH4_4g00822 FvH4_4g00822 |
| malus_domestica | MD13G1197900.v1.1 MD16G1197900.v1.1 |
| prunus_persica | Prupe.1G019400_v2.0.a1 |
| pyrus_communis | pycom13g17150 pycom13g17160 pycom16g16670 pycom16g16680 |
| rosa_chinensis | RchiOBHm_Chr4g0387381 |
| rosa_laevigata | RLG00000010125 |
| rosa_multiflora | Rmu_sc0011657.1_g000001 Rmu_sc0011657.1_g000002 |
| rosa_roxburghii | Rroxscaffold_5G00334110 |
| rosa_rugosa | Rorug03G0309200 |
| rosa_samantha | Rh4AG015900 Rh4BG010700 Rh4CG016800 Rh4DG011900 |
| rosa_wichuraiana | Rw4G000980 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2165 |
| AarI | CACCTGC | 1 cut(s) | 4393 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 4009 |
| Acc36I | ACCTGC | 2 cut(s) | 1703, 4393 |
| Acc65I | GGTACC | 1 cut(s) | 1050 |
| AccB1I | GGYRCC | 1 cut(s) | 1050 |
| AccI | GTMKAC | 2 cut(s) | 3175, 4108 |
| AccII | CGCG | 1 cut(s) | 284 |
| AciI | CCGC | 6 cut(s) | 31, 1432, 3019, 3628, 4318, 5154 |
| AclWI | GGATC | 7 cut(s) | 1260, 1633, 1715, 1728, 1935, 4016, 4050 |
| AcvI | CACGTG | 1 cut(s) | 2756 |
| AfaI | GTAC | 6 cut(s) | 373, 461, 1052, 1180, 2931, 4183 |
| AfeI | AGCGCT | 2 cut(s) | 705, 2800 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 48, 2272, 4357 |
| AflII | CTTAAG | 4 cut(s) | 1346, 1454, 1501, 3527 |
| AflIII | ACRYGT | 2 cut(s) | 2755, 3228 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 4453 |
| AhlI | ACTAGT | 2 cut(s) | 428, 4478 |
| AjnI | CCWGG | 6 cut(s) | 26, 41, 391, 1533, 3507, 4792 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 488, 520, 2039, 2071, 3686, 3718 |
| AleI | CACNNNNGTG | 1 cut(s) | 1797 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 2219, 2251, 2267, 2299 |
| Alw21I | GWGCWC | 5 cut(s) | 1196, 1317, 2595, 2844, 3507 |
| AlwI | GGATC | 7 cut(s) | 1260, 1633, 1715, 1728, 1935, 4016, 4050 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 4256 |
| Ama87I | CYCGRG | 3 cut(s) | 2963, 3179, 4357 |
| Aor51HI | AGCGCT | 2 cut(s) | 705, 2800 |
| AoxI | GGCC | 3 cut(s) | 531, 3264, 3322 |
| AseI | ATTAAT | 3 cut(s) | 2772, 3315, 4415 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 1263, 1290, 2234, 4297 |
| Asp718I | GGTACC | 1 cut(s) | 1050 |
| AspLEI | GCGC | 4 cut(s) | 286, 706, 841, 2801 |
| AspS9I | GGNCC | 2 cut(s) | 1171, 4348 |
| AsuHPI | GGTGA | 6 cut(s) | 781, 1478, 2777, 3176, 4373, 4374 |
| AsuII | TTCGAA | 1 cut(s) | 4892 |
| AsuNHI | GCTAGC | 1 cut(s) | 632 |
| AvaI | CYCGRG | 3 cut(s) | 2963, 3179, 4357 |
| AvaII | GGWCC | 2 cut(s) | 1171, 4348 |
| BamHI | GGATCC | 1 cut(s) | 1720 |
| BanI | GGYRCC | 1 cut(s) | 1050 |
| BanII | GRGCYC | 4 cut(s) | 789, 1196, 2595, 3507 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 5152, 5184 |
| BbrPI | CACGTG | 1 cut(s) | 2756 |
| BbsI | GAAGAC | 7 cut(s) | 1037, 1166, 1925, 2511, 4007, 4294, 4586 |
| Bbv12I | GWGCWC | 5 cut(s) | 1196, 1317, 2595, 2844, 3507 |
| BbvCI | CCTCAGC | 4 cut(s) | 300, 936, 2556, 4257 |
| BccI | CCATC | 5 cut(s) | 1217, 1898, 2614, 2867, 4865 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 128, 162, 611, 645 |
| BciT130I | CCWGG | 6 cut(s) | 28, 43, 393, 1535, 3509, 4794 |
| BclI | TGATCA | 3 cut(s) | 256, 4435, 4554 |
| BcuI | ACTAGT | 2 cut(s) | 428, 4478 |
| BfmI | CTRYAG | 8 cut(s) | 223, 1164, 1754, 2267, 3779, 3842, 4167, 4930 |
| BfoI | RGCGCY | 2 cut(s) | 707, 2802 |
| BfrI | CTTAAG | 4 cut(s) | 1346, 1454, 1501, 3527 |
| BfuAI | ACCTGC | 2 cut(s) | 1703, 4393 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 3272 |
| BglII | AGATCT | 6 cut(s) | 2380, 2478, 2914, 3846, 4759, 5165 |
| BlpI | GCTNAGC | 5 cut(s) | 554, 874, 1980, 2157, 2589 |
| BmcAI | AGTACT | 1 cut(s) | 461 |
| Bme1390I | CCNGG | 6 cut(s) | 28, 43, 393, 1535, 3509, 4794 |
| Bme18I | GGWCC | 2 cut(s) | 1171, 4348 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 4453 |
| BmeT110I | CYCGRG | 3 cut(s) | 2963, 3179, 4357 |
| BmgT120I | GGNCC | 2 cut(s) | 1171, 4348 |
| BmiI | GGNNCC | 2 cut(s) | 1052, 1722 |
| BmrFI | CCNGG | 6 cut(s) | 28, 43, 393, 1535, 3509, 4794 |
| BmrI | ACTGGG | 1 cut(s) | 2185 |
| BmtI | GCTAGC | 1 cut(s) | 636 |
| BmuI | ACTGGG | 1 cut(s) | 2185 |
| BoxI | GACNNNNGTC | 1 cut(s) | 4714 |
| BpiI | GAAGAC | 7 cut(s) | 1037, 1166, 1925, 2511, 4007, 4294, 4586 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2405, 2437 |
| BpmI | CTGGAG | 9 cut(s) | 767, 1164, 1556, 2407, 2939, 3368, 3918, 4724, 4796 |
| Bpu10I | CCTNAGC | 7 cut(s) | 300, 936, 1248, 2556, 3578, 3683, 4257 |
| Bpu1102I | GCTNAGC | 5 cut(s) | 554, 874, 1980, 2157, 2589 |
| Bpu14I | TTCGAA | 1 cut(s) | 4892 |
| Bsa29I | ATCGAT | 1 cut(s) | 889 |
| BsaAI | YACGTR | 2 cut(s) | 371, 2756 |
| BsaBI | GATNNNNATC | 3 cut(s) | 2483, 3677, 4137 |
| BsaI | GGTCTC | 2 cut(s) | 623, 4901 |
| BsaJI | CCNNGG | 1 cut(s) | 294 |
| BsaWI | WCCGGW | 2 cut(s) | 4910, 5171 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 2219, 2249, 4465, 4495 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 48, 2272, 4357 |
| Bse118I | RCCGGY | 2 cut(s) | 869, 2982 |
| Bse1I | ACTGG | 7 cut(s) | 582, 1174, 2134, 2191, 3244, 3351, 3901 |
| Bse3DI | GCAATG | 4 cut(s) | 129, 2583, 3799, 4174 |
| Bse8I | GATNNNNATC | 3 cut(s) | 2483, 3677, 4137 |
| BseBI | CCWGG | 6 cut(s) | 28, 43, 393, 1535, 3509, 4794 |
| BseCI | ATCGAT | 1 cut(s) | 889 |
| BseDI | CCNNGG | 1 cut(s) | 294 |
| BseGI | GGATG | 6 cut(s) | 613, 703, 1660, 2063, 3670, 3817 |
| BseJI | GATNNNNATC | 3 cut(s) | 2483, 3677, 4137 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 48, 2272, 4357 |
| BseMI | GCAATG | 4 cut(s) | 129, 2583, 3799, 4174 |
| BseNI | ACTGG | 7 cut(s) | 582, 1174, 2134, 2191, 3244, 3351, 3901 |
| BseRI | GAGGAG | 4 cut(s) | 1971, 3365, 3773, 4919 |
| BseYI | CCCAGC | 1 cut(s) | 3653 |
| Bsh1236I | CGCG | 1 cut(s) | 284 |
| BshFI | GGCC | 3 cut(s) | 533, 3266, 3324 |
| BshNI | GGYRCC | 1 cut(s) | 1050 |
| BshVI | ATCGAT | 1 cut(s) | 889 |
| BsiHKAI | GWGCWC | 5 cut(s) | 1196, 1317, 2595, 2844, 3507 |
| BsiHKCI | CYCGRG | 3 cut(s) | 2963, 3179, 4357 |
| BsiSI | CCGG | 5 cut(s) | 870, 2983, 4471, 4911, 5172 |
| BsiWI | CGTACG | 1 cut(s) | 371 |
| BslFI | GGGAC | 2 cut(s) | 1360, 1448 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 48, 2272, 4357 |
| BsmBI | CGTCTC | 3 cut(s) | 924, 2804, 2915 |
| BsmFI | GGGAC | 2 cut(s) | 1360, 1448 |
| BsmI | GAATGC | 2 cut(s) | 853, 2949 |
| BsnI | GGCC | 3 cut(s) | 533, 3266, 3324 |
| Bso31I | GGTCTC | 2 cut(s) | 623, 4901 |
| BsoBI | CYCGRG | 3 cut(s) | 2963, 3179, 4357 |
| Bsp119I | TTCGAA | 1 cut(s) | 4892 |
| Bsp1286I | GDGCHC | 6 cut(s) | 789, 1196, 1317, 2595, 2844, 3507 |
| Bsp1720I | GCTNAGC | 5 cut(s) | 554, 874, 1980, 2157, 2589 |
| Bsp19I | CCATGG | 1 cut(s) | 294 |
| BspACI | CCGC | 6 cut(s) | 31, 1432, 3019, 3628, 4318, 5154 |
| BspANI | GGCC | 3 cut(s) | 533, 3266, 3324 |
| BspDI | ATCGAT | 1 cut(s) | 889 |
| BspFNI | CGCG | 1 cut(s) | 284 |
| BspHI | TCATGA | 1 cut(s) | 2013 |
| BspLI | GGNNCC | 2 cut(s) | 1052, 1722 |
| BspMAI | CTGCAG | 1 cut(s) | 3783 |
| BspMI | ACCTGC | 2 cut(s) | 1703, 4393 |
| BspOI | GCTAGC | 1 cut(s) | 636 |
| BspPI | GGATC | 7 cut(s) | 1260, 1633, 1715, 1728, 1935, 4016, 4050 |
| BspQI | GCTCTTC | 3 cut(s) | 2439, 3567, 4303 |
| BspT104I | TTCGAA | 1 cut(s) | 4892 |
| BspT107I | GGYRCC | 1 cut(s) | 1050 |
| BspTI | CTTAAG | 4 cut(s) | 1346, 1454, 1501, 3527 |
| BspTNI | GGTCTC | 2 cut(s) | 623, 4901 |
| BsrDI | GCAATG | 4 cut(s) | 129, 2583, 3799, 4174 |
| BsrFI | RCCGGY | 2 cut(s) | 869, 2982 |
| BsrI | ACTGG | 7 cut(s) | 582, 1174, 2134, 2191, 3244, 3351, 3901 |
| BssAI | RCCGGY | 2 cut(s) | 869, 2982 |
| BssECI | CCNNGG | 1 cut(s) | 294 |
| BssNAI | GTATAC | 1 cut(s) | 3176 |
| BssT1I | CCWWGG | 1 cut(s) | 294 |
| Bst1107I | GTATAC | 1 cut(s) | 3176 |
| Bst2UI | CCWGG | 6 cut(s) | 28, 43, 393, 1535, 3509, 4794 |
| BstAFI | CTTAAG | 4 cut(s) | 1346, 1454, 1501, 3527 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 4996 |
| BstBAI | YACGTR | 2 cut(s) | 371, 2756 |
| BstBI | TTCGAA | 1 cut(s) | 4892 |
| BstDSI | CCRYGG | 1 cut(s) | 294 |
| BstF5I | GGATG | 6 cut(s) | 613, 703, 1660, 2063, 3670, 3817 |
| BstFNI | CGCG | 1 cut(s) | 284 |
| BstH2I | RGCGCY | 2 cut(s) | 707, 2802 |
| BstHHI | GCGC | 4 cut(s) | 286, 706, 841, 2801 |
| BstNI | CCWGG | 6 cut(s) | 28, 43, 393, 1535, 3509, 4794 |
| BstNSI | RCATGY | 1 cut(s) | 1429 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 4714 |
| BstSCI | CCNGG | 6 cut(s) | 26, 41, 391, 1533, 3507, 4792 |
| BstSFI | CTRYAG | 8 cut(s) | 223, 1164, 1754, 2267, 3779, 3842, 4167, 4930 |
| BstUI | CGCG | 1 cut(s) | 284 |
| BstV2I | GAAGAC | 7 cut(s) | 1037, 1166, 1925, 2511, 4007, 4294, 4586 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 2873, 3251, 5114 |
| BstZ17I | GTATAC | 1 cut(s) | 3176 |
| Bsu15I | ATCGAT | 1 cut(s) | 889 |
| BsuRI | GGCC | 3 cut(s) | 533, 3266, 3324 |
| BsuTUI | ATCGAT | 1 cut(s) | 889 |
| BtgI | CCRYGG | 1 cut(s) | 294 |
| BtgZI | GCGATG | 2 cut(s) | 4403, 4583 |
| BtsCI | GGATG | 6 cut(s) | 613, 703, 1660, 2063, 3670, 3817 |
| BtsI | GCAGTG | 2 cut(s) | 1064, 1627 |
| BveI | ACCTGC | 2 cut(s) | 1703, 4393 |
| CaiI | CAGNNNCTG | 1 cut(s) | 4256 |
| CciI | TCATGA | 1 cut(s) | 2013 |
| CfoI | GCGC | 4 cut(s) | 286, 706, 841, 2801 |
| Cfr10I | RCCGGY | 2 cut(s) | 869, 2982 |
| Cfr13I | GGNCC | 2 cut(s) | 1171, 4348 |
| ClaI | ATCGAT | 1 cut(s) | 889 |
| CseI | GACGC | 4 cut(s) | 941, 1031, 2821, 4119 |
| Csp6I | GTAC | 6 cut(s) | 372, 460, 1051, 1179, 2930, 4182 |
| CviQI | GTAC | 6 cut(s) | 372, 460, 1051, 1179, 2930, 4182 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 4009 |
| DriI | GACNNNNNGTC | 1 cut(s) | 4453 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 4009 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 4453 |
| Ecl136II | GAGCTC | 3 cut(s) | 1194, 2593, 3505 |
| Eco130I | CCWWGG | 1 cut(s) | 294 |
| Eco147I | AGGCCT | 1 cut(s) | 533 |
| Eco24I | GRGCYC | 4 cut(s) | 789, 1196, 2595, 3507 |
| Eco31I | GGTCTC | 2 cut(s) | 623, 4901 |
| Eco32I | GATATC | 2 cut(s) | 906, 4927 |
| Eco47I | GGWCC | 2 cut(s) | 1171, 4348 |
| Eco47III | AGCGCT | 2 cut(s) | 705, 2800 |
| Eco53kI | GAGCTC | 3 cut(s) | 1194, 2593, 3505 |
| Eco72I | CACGTG | 1 cut(s) | 2756 |
| Eco88I | CYCGRG | 3 cut(s) | 2963, 3179, 4357 |
| EcoICRI | GAGCTC | 3 cut(s) | 1194, 2593, 3505 |
| EcoRI | GAATTC | 4 cut(s) | 218, 2126, 2742, 3631 |
| EcoRII | CCWGG | 6 cut(s) | 26, 41, 391, 1533, 3507, 4792 |
| EcoRV | GATATC | 2 cut(s) | 906, 4927 |
| EcoT14I | CCWWGG | 1 cut(s) | 294 |
| EcoT38I | GRGCYC | 4 cut(s) | 789, 1196, 2595, 3507 |
| ErhI | CCWWGG | 1 cut(s) | 294 |
| Esp3I | CGTCTC | 3 cut(s) | 924, 2804, 2915 |
| FaqI | GGGAC | 2 cut(s) | 1360, 1448 |
| FauI | CCCGC | 2 cut(s) | 1425, 3012 |
| FbaI | TGATCA | 3 cut(s) | 256, 4435, 4554 |
| FblI | GTMKAC | 2 cut(s) | 3175, 4108 |
| FokI | GGATG | 6 cut(s) | 620, 710, 1667, 2050, 3677, 3824 |
| FriOI | GRGCYC | 4 cut(s) | 789, 1196, 2595, 3507 |
| GlaI | GCGC | 4 cut(s) | 285, 705, 840, 2800 |
| GsaI | CCCAGC | 1 cut(s) | 3657 |
| GsuI | CTGGAG | 9 cut(s) | 767, 1164, 1556, 2407, 2939, 3368, 3918, 4724, 4796 |
| HaeII | RGCGCY | 2 cut(s) | 707, 2802 |
| HaeIII | GGCC | 3 cut(s) | 533, 3266, 3324 |
| HapII | CCGG | 5 cut(s) | 870, 2983, 4471, 4911, 5172 |
| HgaI | GACGC | 4 cut(s) | 941, 1031, 2821, 4119 |
| HhaI | GCGC | 4 cut(s) | 286, 706, 841, 2801 |
| Hin6I | GCGC | 4 cut(s) | 284, 704, 839, 2799 |
| HinP1I | GCGC | 4 cut(s) | 284, 704, 839, 2799 |
| HincII | GTYRAC | 1 cut(s) | 4657 |
| HindII | GTYRAC | 1 cut(s) | 4657 |
| HindIII | AAGCTT | 5 cut(s) | 490, 556, 680, 3279, 5024 |
| HpaII | CCGG | 5 cut(s) | 870, 2983, 4471, 4911, 5172 |
| HphI | GGTGA | 6 cut(s) | 781, 1478, 2777, 3176, 4373, 4374 |
| Hpy99I | CGWCG | 1 cut(s) | 1647 |
| HpyCH4IV | ACGT | 8 cut(s) | 190, 370, 628, 2394, 2755, 2899, 3228, 4454 |
| HpySE526I | ACGT | 8 cut(s) | 190, 370, 628, 2394, 2755, 2899, 3228, 4454 |
| HspAI | GCGC | 4 cut(s) | 284, 704, 839, 2799 |
| KpnI | GGTACC | 1 cut(s) | 1054 |
| KroI | GCCGGC | 1 cut(s) | 869 |
| KroNI | GCCGGC | 1 cut(s) | 871 |
| Ksp22I | TGATCA | 3 cut(s) | 256, 4435, 4554 |
| LguI | GCTCTTC | 3 cut(s) | 2439, 3567, 4303 |
| MaeII | ACGT | 8 cut(s) | 190, 370, 628, 2394, 2755, 2899, 3228, 4454 |
| MaeIII | GTNAC | 9 cut(s) | 56, 278, 1466, 2348, 3408, 3644, 3723, 3928, 4493 |
| MfeI | CAATTG | 1 cut(s) | 2003 |
| MhlI | GDGCHC | 6 cut(s) | 789, 1196, 1317, 2595, 2844, 3507 |
| MmeI | TCCRAC | 5 cut(s) | 1440, 2226, 2865, 3949, 4627 |
| MroNI | GCCGGC | 1 cut(s) | 869 |
| MroXI | GAANNNNTTC | 4 cut(s) | 1263, 1290, 2234, 4297 |
| MslI | CAYNNNNRTG | 4 cut(s) | 355, 1797, 2937, 5112 |
| MspA1I | CMGCKG | 5 cut(s) | 451, 2717, 3019, 3854, 4103 |
| MspCI | CTTAAG | 4 cut(s) | 1346, 1454, 1501, 3527 |
| MspI | CCGG | 5 cut(s) | 870, 2983, 4471, 4911, 5172 |
| MspR9I | CCNGG | 6 cut(s) | 28, 43, 393, 1535, 3509, 4794 |
| MunI | CAATTG | 1 cut(s) | 2003 |
| Mva1269I | GAATGC | 2 cut(s) | 853, 2949 |
| MvaI | CCWGG | 6 cut(s) | 28, 43, 393, 1535, 3509, 4794 |
| MvnI | CGCG | 1 cut(s) | 284 |
| NaeI | GCCGGC | 1 cut(s) | 871 |
| NcoI | CCATGG | 1 cut(s) | 294 |
| NgoMIV | GCCGGC | 1 cut(s) | 869 |
| NheI | GCTAGC | 1 cut(s) | 632 |
| NlaIV | GGNNCC | 2 cut(s) | 1052, 1722 |
| NmeAIII | GCCGAG | 1 cut(s) | 3292 |
| NmuCI | GTSAC | 5 cut(s) | 56, 278, 1466, 3644, 4493 |
| NspI | RCATGY | 1 cut(s) | 1429 |
| NspV | TTCGAA | 1 cut(s) | 4892 |
| OliI | CACNNNNGTG | 1 cut(s) | 1797 |
| PaeR7I | CTCGAG | 2 cut(s) | 2963, 3179 |
| PagI | TCATGA | 1 cut(s) | 2013 |
| PaqCI | CACCTGC | 1 cut(s) | 4393 |
| PceI | AGGCCT | 1 cut(s) | 533 |
| PciSI | GCTCTTC | 3 cut(s) | 2439, 3567, 4303 |
| PctI | GAATGC | 2 cut(s) | 853, 2949 |
| PdiI | GCCGGC | 1 cut(s) | 871 |
| PdmI | GAANNNNTTC | 4 cut(s) | 1263, 1290, 2234, 4297 |
| Pfl23II | CGTACG | 1 cut(s) | 371 |
| PflFI | GACNNNGTC | 1 cut(s) | 4396 |
| PfoI | TCCNGGA | 2 cut(s) | 1533, 3507 |
| PmaCI | CACGTG | 1 cut(s) | 2756 |
| PmlI | CACGTG | 1 cut(s) | 2756 |
| Ppu21I | YACGTR | 2 cut(s) | 371, 2756 |
| PshAI | GACNNNNGTC | 1 cut(s) | 4714 |
| PshBI | ATTAAT | 3 cut(s) | 2772, 3315, 4415 |
| PsiI | TTATAA | 1 cut(s) | 2165 |
| Psp124BI | GAGCTC | 3 cut(s) | 1196, 2595, 3507 |
| Psp6I | CCWGG | 6 cut(s) | 26, 41, 391, 1533, 3507, 4792 |
| PspCI | CACGTG | 1 cut(s) | 2756 |
| PspFI | CCCAGC | 1 cut(s) | 3653 |
| PspGI | CCWGG | 6 cut(s) | 26, 41, 391, 1533, 3507, 4792 |
| PspLI | CGTACG | 1 cut(s) | 371 |
| PspN4I | GGNNCC | 2 cut(s) | 1052, 1722 |
| PspPI | GGNCC | 2 cut(s) | 1171, 4348 |
| PspXI | VCTCGAGB | 2 cut(s) | 2963, 3179 |
| PstI | CTGCAG | 1 cut(s) | 3783 |
| PstNI | CAGNNNCTG | 1 cut(s) | 4256 |
| PsyI | GACNNNGTC | 1 cut(s) | 4396 |
| PvuII | CAGCTG | 4 cut(s) | 451, 2717, 3854, 4103 |
| RsaI | GTAC | 6 cut(s) | 373, 461, 1052, 1180, 2931, 4183 |
| RsaNI | GTAC | 6 cut(s) | 372, 460, 1051, 1179, 2930, 4182 |
| RseI | CAYNNNNRTG | 4 cut(s) | 355, 1797, 2937, 5112 |
| SacI | GAGCTC | 3 cut(s) | 1196, 2595, 3507 |
| SapI | GCTCTTC | 3 cut(s) | 2439, 3567, 4303 |
| Sau96I | GGNCC | 2 cut(s) | 1171, 4348 |
| ScaI | AGTACT | 1 cut(s) | 461 |
| ScrFI | CCNGG | 6 cut(s) | 28, 43, 393, 1535, 3509, 4794 |
| SduI | GDGCHC | 6 cut(s) | 789, 1196, 1317, 2595, 2844, 3507 |
| SfcI | CTRYAG | 8 cut(s) | 223, 1164, 1754, 2267, 3779, 3842, 4167, 4930 |
| Sfr274I | CTCGAG | 2 cut(s) | 2963, 3179 |
| SfuI | TTCGAA | 1 cut(s) | 4892 |
| SinI | GGWCC | 2 cut(s) | 1171, 4348 |
| SlaI | CTCGAG | 2 cut(s) | 2963, 3179 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 355, 1797, 2937, 5112 |
| SpeI | ACTAGT | 2 cut(s) | 428, 4478 |
| SseBI | AGGCCT | 1 cut(s) | 533 |
| SsiI | CCGC | 6 cut(s) | 31, 1432, 3019, 3628, 4318, 5154 |
| SstI | GAGCTC | 3 cut(s) | 1196, 2595, 3507 |
| StuI | AGGCCT | 1 cut(s) | 533 |
| StyD4I | CCNGG | 6 cut(s) | 26, 41, 391, 1533, 3507, 4792 |
| StyI | CCWWGG | 1 cut(s) | 294 |
| TaiI | ACGT | 8 cut(s) | 193, 373, 631, 2397, 2758, 2902, 3231, 4457 |
| TatI | WGTACW | 3 cut(s) | 459, 1178, 2929 |
| TauI | GCSGC | 1 cut(s) | 5157 |
| TseFI | GTSAC | 5 cut(s) | 56, 278, 1466, 3644, 4493 |
| Tsp45I | GTSAC | 5 cut(s) | 56, 278, 1466, 3644, 4493 |
| TspGWI | ACGGA | 3 cut(s) | 755, 1631, 3848 |
| Tth111I | GACNNNGTC | 1 cut(s) | 4396 |
| Vha464I | CTTAAG | 4 cut(s) | 1346, 1454, 1501, 3527 |
| VpaK11BI | GGWCC | 2 cut(s) | 1171, 4348 |
| VspI | ATTAAT | 3 cut(s) | 2772, 3315, 4415 |
| XbaI | TCTAGA | 4 cut(s) | 572, 913, 1867, 4673 |
| XceI | RCATGY | 1 cut(s) | 1429 |
| XhoI | CTCGAG | 2 cut(s) | 2963, 3179 |
| XmiI | GTMKAC | 2 cut(s) | 3175, 4108 |
| XmnI | GAANNNNTTC | 4 cut(s) | 1263, 1290, 2234, 4297 |
| ZrmI | AGTACT | 1 cut(s) | 461 |