Rw4G000980

KIP1-like protein

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
Physical Location & Seq
Forward (+)
1913609 .. 1922205
8597 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G000980.1

Sequence Viewer

Length: 5934 bp
ATGGCAACCCTGTTACAGTCTGAGTCCAGACGCTTGTATTCTTGGTGGTGGGACAGTCACATTAGCCCAAAGAACTCAAAATGGCTTCAGGAAAATCTTACAGATATGGATGCTAAAGTCAAAGCAATGATCAAGCTCATTGAAGAAGATGCAGACTCTTTTGCAAGGAGAGCAGAAATGTACTACAAGAAACGCCCCGAGCTCATGAAACTGGTTGAGGAGTTCTATAGAGCGTATCGTGCATTGGCTGAGAGGTATGATCATGCAACTGTGGAGCTGCGCCAGGCTCATCGAACCATGGCAGAAGCATTTCCCAACCAAGTACCTTTTGAACTCGCCGATGAATCATCCTCAGGCTCTTATGGCCCAGAGGCTGGACCTCATACACCAGAAATGCTGCATCCAGTTCGTGCCTTATTTGACTCAGATGACTTGCATAAGGATGCACTGGGACTCTCTTCAACTGATTTACATGATTTGAAAAGGAATGGAGGCTCCGACTCTGGAATAAGCAAAAGAGGTCTGAAGCAGCTTAAGGAAATGTTCAATCCAGGAGAAGAGTTTAATCCAAAGGTTGCGGGGGGAAGGTTTACCGAATGCTTAAGTTTTCATGAAGCAGATGAAAGCAAACCAAAGTTACAGAATGGGTACTCTCAGTTAACTAGTGAGAACCAGAGTCTCAAGAACCAGGTCCTCTCTCAATCTGAGCGTGCTGTAAAAGCTGAAACTGAAATCCAAATCCTACAGAAAACTTTATCTGAGATACAAGCTGAAAAAGATACAGTCCATCATCAGTACCAGCAGAGTTTGGAGAAGTTATCTAAGCTGGGGAAAGAACTGAATAATGCTCAAGAGGCTGCTGGAGGGCTCAATGAACGAGCCAGTAAAGCTGATATTGAAATTACAATACTGAAGGAAGCCCTTGGGGAATTAGAAGCTGAGAGAGATGCTGGTCTTCATCAGTACAATCGGTGTCTGGAAAGGATATCTAGCCTGGAGACCATGTTATCTTTTTCCCGGGAGGATGCAAAAGGACTTAATGAGCGAGCTGTTAAAGCAGAAACTGAAGCTCAAAATCTGAAGCAAGAACTTTCTAAATTAGAGGCAGAAAAGGAAGCCTGTTTTCTCAAGTACAAGCAATGTCTTGAGAAGATATCTGCTCTGGAGGCTACGATCTCAGCTGATGAAGAAAATGCCAGAATCCTTAATGAACAAATTGAAAGAGCTGAAAGTGAAGTTAAATCACTGAAGGAAGTTGTTGCTGTACTGAAGGAAGAGAAAGAATCTGCAGCTCTACAATTCAAGCAGTACATGGATACAATAGCTAAGATGGAAAGAGAACTTTCTCAAGCTCAAGCGGATGCCGAAAGACTGAATAGTGAAATTTTGACAGGGGCAGCGAAATTAAAAGGTGCTGAAGAACAATGTGTTCTCTTGGAGAGATCAAATCAGTCTCTGCGGTTAGAGGCGGATGGTCTGGTGAAGAGGATTGCAACAAAAGATGAAGAACTTTCAGACAAGAATGATGAGATGGAGAAACTTCAGAATCTGATGCAAGAGGAGCACTTGCGGTTTGTGCAAGCTGAAGCCACTCTCCAATTTCTGCAGAAGTTGCATTCTCAATCCCAAGAAGAGCAGAAAGCTTTAGCCCTGGAGTTCAAAAACGGGCTTCAGATGTTGAAGGACTTGGAGATGAGCAAACATGGTGTGGAGGATGATATGCAACGGGTTAAGGGAGAAAATAAGAGCTTGAATGAACTGAACTTCTCTTGTACTATCTCCATTAAGAACCTGCAAGATGAAATCTTTAGCATGAAGGAGATGAAAGAGAAACTTGAAGAGGAGGTTAAGCTTAAAACAGACCAGAGCAATGCTCTCCAGAGGCAAATTTCCCATTTGGAGGATGAAATTAAGGGGTTGAATGGAAGATATCAGGCTATTGTGGAGCAAGTGGAGTCAGTAGGTTTAACTCCTGAATGCTTTGGATCATCTGTGAAAGACTTGCAAAATGAGAAGTCAAGGCTAGAAGATATATGCACAAGGGATAGAGAAGACAGAGAACATCTTTACGAGAAGTTGAAGGATATGGGTAAACTTTCAAAGGAGAATGCTGTTCTGGAGAGTTCACTTTTGGGTTTGAATGGGGAGTTAGAGGGTTTGAGAGGGAAGGTCAAGGAATTGCAGGAGTCTTGCCACTTCCTCCAGGGAGAAAAAGCCACTCTTGTTGCTGAGAAATTTGCCCTGCTTTCCCAGTTGCAAATTATCACTCAGAACATGCACAAGCTTTTCGAGAAGAACTCATTGCTGGAAAGTTCCCTCTCCGGAGCAAACATTGAGCTCGAAAAGTTGAGGGCAAGAGCAAAGAGCTTAGAAGAGCTGTGCCAGTTACTCAGTAACGAGAAGTCCAATCTTCTTAATGAGAGAGGCACGCTGGTGTTTCAGTTAAATGATGTTGAGGAGAGACTGCGAAGCCTGGAAAAGAGGTTTAAAAAATTAGAGAAGAAGTACTCTAAAATGGAGAAGGAGAAAGAGTCCACACTTGATGCAGTAGAAGAATTACGGGGTTCCTTGCATGCAGAAAAACGAGAGCGTGCTAGTTATATTCGGTCAAGTGAATCCCGATTGGCAGGTTTGGAAAGCAACGTCCATCTCCTGCAGGAAGAAAGAAGGTTGGGAAAGAAAGAATTTGAAGCAGAGCTTGACAAAGCTGTGAATGCTCAGATTGAGATCTTTATCCTTCAGAAGTTTATACAAGATCTGGAAGAGAAGAATTTGACAATATACATTGAATGTCAGAGACATGTTGAGGCTTCCAAGTTTTCTGATAAGCTGATCAAAGAGTTGGAGAGTGAAAATCTTGAGCTACAGGTGGAAGAAGAATTCTTAGTAGAAGAAATCGAAAAGTTGAGGCTGGGAATTTATCAAGTGTTCAGGTCTCTGCAAATCGAAACAGGTACACATGAAGATAAGATTGAGCGAGAAAAAGTACTTGTGCTGCACATTTTGAATGCTATCAAGGACTTGAAAAGTTCTCTGGTTCAGAGCAAGGATGAGGAGCAGCAGTTGCTGGTTGAGAATTCAGTGCTCTTTACTTTACTTCAGGAGCTGAGATCCGAAGGTGCAGAGATAGAGTCGGCAAAACAAACTTTGGAGCAGGAGTATGAGGTAATGGCAGACCATTGTGCTATGCTACAAAATGACAAGCATGAGCTTCTAGAGACGCAAAGGCAGTTGAGGTTGGAAGTGACTGAGAAAGAGCAAAAGGAGGAAATATTAGAGGCTGATTTGGAAAGTCTTCAAGGTAAGCTGGTGAGTCTGCAAGACGCATACCTGATTTTGCAGGAAGAACAATCCAAGGTGCTTGACGAGAGGAGATCCTTGCTTAAGAAGCTTTTGGACCTGAAAGAGGAAAAGCAAGTCCTTGAAGAGGATAATAATGTTAATTTTCATGAAGCACTGGCTTTCAGCAACCTCTCTATGGTTTTAGAGAGCTTCACAATTGAGAAAGTTGTGGAACTAAAAGCACTTGCTGATGATCTTGATGGTCTTTGTGCTACTAACAATGACCTTAAAGATGCTGTTAGAACATTGGGTGAGAAGTTAGTGATGAAAGAAGTAGAGAATCTACATCTGAATGATATGGTTCAATTGTTGGACAAGGAACTGTGTGAAGCCAGTGACTTGAATGGTTTACTAAGCCATCAAATTTCAATTGGAAAGGATTCTCTCAAACAGAAAAACCTGAAGCTCTCAGAGGTAGAAGAGAAGCTTCAAAAGACAGAGGACTTGAATGTGGAATTATGCAGAACTGTTGAGGAGCTGAAGATGGAATATGAAGAGTCAAAAATAATGGGTCAAAATTATGAGAAGCAGATTCTCCAACTATCTGAAGTCTGCACTATTCAGAAAAAGGAAATGAATAGCCTGAGTGAAGCAAATGAAACTCTGGAGGATGAAATCTTATGTAAAGCGATTGAAAAAGAAATAGAAACTCTGCACCTGAGTGAGACAGCCCAATTGTTGGACATGGAATTGTGTGAAGCCAAGGACTCAAATGATCAACTGAGCCATAGAATCTTAGTTGGAGAAGGTTGTCTGAAACAGAAAACTACGGAGCTTTCAGAAGCAGAAGAGAAGCTTAGACAGACAGAAGACTTGAATGTTGAACTATGCAGAAATGTTGAGGAACTGAAGGTGCAACATGAAGAATCAAAACTCAAAAGAGAAAATTGTGAGAAGGAGATTGTGGAGCTATCCAAAGATAACACAAATCAGAAAATGGAAATTGAGAGCCTTCGTGAAGCAAATGGAACTCTAGAGATTGAAGTGGGTGTCTTGTGTGAAGCAATTGAAGAATACAAAATTAGAGAAGACTATATGAGTTCAGAGCTGCAAGAAAGAAGCAATGAGTTTGAACTCTGGGAGGCTGAGGCTACAACATTCTACTTTGATCTTCACAATTCTGCTGTCCGTGAAGTTTTTCTTGAAGATAAGGTTCATGAGCTTACAGAAGTCTGTGAGAGAATTAAGGATGAAGATGCTGCAAAATTTGTGGAGATTGAACAAATGAAAGAAAGAGTTAGCATCTTGGAAAGTGAAGTTGGAGGTCTGACGGCCCAGTTGTCTGCATATGCTCCTGCCATAGCCTCTTTGAGAGAGAATGTAATTTCTCTTCAGCAAAATGCCCATCTTAGGAAGAAGCTTTTTGTGGAAAACAACCAGCAACACAAGGAGGGCAAACTGCCAAATAATCTATATCAGAGGAGCTCTCAAGATTACAAAGAAGACCAAAGCACTTTGATATCAAGTGGAATTTCCGAATTGGAAGAAATGCAGACTATGATCAAAGAAGTTGAAAAGGCAGTTATTGAAGAAACGGAAAGGCTTTCAATTGAATTAGTTGAAAAGGAAATGGTGGAAGAAATTGAAAGGCTTACAACAAAGGAAAGGGCAGAGGCCTTGGTACAGACTGAAGTAAAATCAACAGGTAACTCAAATCAAGAAAATGGTAGCAAAGGAGAAGAGGTGGAACCTGTGAATGAGTACTCGGATGATAATCTGAAGTTGAGTAAACCTGAAATAAGGCTTTTGACGAAAGACATTCTGCTTGATCATGTTTCAGATTCTTCATTCTATGGAAGAAGCAGGAGAAAGAATGGTAGGGCTGATGATCAGATGCTGGAGTTGTGGGAAGCAGCCGAGCAGCATTGCCTCCAGGATCCAGCAGCCAATATCAGGCAAGACCAGGCATCCCCACCAACTGAAGATGTTACCCCCTACCCTCGGTTTGCAAACTCACGGAGGACGACTCGAAAGTCTCCTTCAGAAGTTCAGGTTGAGAAGGAGTTGGGCATTGACAAGCTGGAGGTGTCCTACAGTATTCGACAACCAAGTCATGATGGCAAGAAGGAAAAGATCTTGGAGAGGCTTGCTTCTGATGCTCAGAAACTGATGTGTCTACAAACGTCTGTGCAAGACTTGCATAAGAAGGTGGAGACTAACAAGAAGGGTAAGAAGATCAACAGCTCTGAATACGAAACGGTGAAAAGACAGTTGCACGAAGTTGAGGATGCGGTTGTGCAGCTGGTGGATATTAATGATCAGTTGAAAAAGAATGTTGAAGAGTTTCCATCTTTGGATGAGCAGACTTCCATAGAGTTGGAGGAGGCTGGAAATGTCAGCAGAGAGGGAGTAACCGAACAAGCATGGAAAGGATCTGAGAAGATTGGAAGGTTGCAGTTTGAGTTGCAGAACATCCAATATGTTTTGGTGAAATGGGAGGGTGAAAAGAAAAGGAAAGGGAGGCATGGATTTTATGTGAGTAGAACAGGTCTTCTCCTGAGGGATTTTATTTACAGTGGCAGAAGTAGTAGTGAAAGGCGCAAGAAGGGTTGTTTGTGTGGTTGTATGAGACCATCAACGAGAGGAGAATAA

Protein Analysis

1977

Amino Acids

226.93

Weight (kDa)

4.98

Isoelectric Point (pI)

55.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
KIP1 PF07765 14 - 87 2.3e-38 KIP1-like protein
CCDC39 PF24161 212 - 456 1.7e-06 Coiled-coil domain-containing protein 39
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 5314, 5391
Acc36I ACCTGC 2 cut(s) 1800, 2618
AccB7I CCANNNNNTGG 2 cut(s) 374, 4021
AccI GTMKAC 1 cut(s) 5458
AccIII TCCGGA 1 cut(s) 2321
AciI CCGC 6 cut(s) 578, 1358, 1459, 1469, 1570, 5573
AclWI GGATC 6 cut(s) 1993, 3105, 3369, 5213, 5226, 5722
AfiI CCNNNNNNNGG 9 cut(s) 374, 1900, 3406, 3427, 3478, 4021, 4692, 5235, 5283
AflII CTTAAG 3 cut(s) 533, 601, 3383
AflIII ACRYGT 1 cut(s) 2800
AhlI ACTAGT 1 cut(s) 662
AjnI CCWGG 9 cut(s) 282, 550, 687, 993, 1650, 2202, 2472, 5214, 5244
AjuI GAANNNNNNNTTGG 2 cut(s) 4584, 4616
AleI CACNNNNGTG 2 cut(s) 2432, 4002
Alw21I GWGCWC 5 cut(s) 204, 1566, 2340, 3087, 4769
AlwI GGATC 6 cut(s) 1993, 3105, 3369, 5213, 5226, 5722
AlwNI CAGNNNCTG 8 cut(s) 374, 1064, 1456, 1549, 3067, 3106, 5179, 5449
Ama87I CYCGRG 2 cut(s) 197, 1017
Aor13HI TCCGGA 1 cut(s) 2321
AoxI GGCC 3 cut(s) 364, 4614, 4956
AseI ATTAAT 1 cut(s) 5595
Asp700I GAANNNNTTC 5 cut(s) 309, 3294, 3721, 4479, 5625
AspLEI GCGC 2 cut(s) 282, 5883
AspS9I GGNCC 5 cut(s) 365, 377, 691, 3397, 4615
AsuC2I CCSGG 2 cut(s) 1018, 1019
AsuHPI GGTGA 6 cut(s) 1492, 3322, 3605, 5554, 5782, 5795
AvaI CYCGRG 2 cut(s) 197, 1017
AvaII GGWCC 3 cut(s) 377, 691, 3397
AxyI CCTNAGG 2 cut(s) 352, 5840
BamHI GGATCC 1 cut(s) 5218
BanII GRGCYC 4 cut(s) 204, 870, 2340, 4769
BarI GAAGNNNNNNTAC 2 cut(s) 4656, 4688
BbsI GAAGAC 7 cut(s) 947, 2058, 3287, 4158, 4377, 4791, 5825
Bbv12I GWGCWC 5 cut(s) 204, 1566, 2340, 3087, 4769
BbvCI CCTCAGC 1 cut(s) 4428
BceAI ACGGC 1 cut(s) 4629
BcgI CGANNNNNNTGC 2 cut(s) 389, 423
BciT130I CCWGG 9 cut(s) 284, 552, 689, 995, 1652, 2204, 2474, 5216, 5246
BciVI GTATCC 1 cut(s) 1309
BclI TGATCA 8 cut(s) 129, 259, 2832, 4057, 4842, 5110, 5170, 5599
BcnI CCSGG 2 cut(s) 1018, 1019
BcuI ACTAGT 1 cut(s) 662
BfaI CTAG 6 cut(s) 663, 990, 2024, 2595, 3215, 4316
BfmI CTRYAG 7 cut(s) 226, 743, 1287, 1604, 2654, 2864, 5374
BfrI CTTAAG 3 cut(s) 533, 601, 3383
BfuAI ACCTGC 2 cut(s) 1800, 2618
BfuI GTATCC 1 cut(s) 1309
BglII AGATCT 3 cut(s) 2727, 2755, 5415
BmcAI AGTACT 3 cut(s) 2507, 2988, 5045
Bme18I GGWCC 3 cut(s) 377, 691, 3397
BmeT110I CYCGRG 2 cut(s) 197, 1017
BmgT120I GGNCC 5 cut(s) 365, 377, 691, 3397, 4615
BmiI GGNNCC 4 cut(s) 496, 2566, 5031, 5220
BmrI ACTGGG 3 cut(s) 458, 2245, 4612
BmuI ACTGGG 3 cut(s) 458, 2245, 4612
BpiI GAAGAC 7 cut(s) 947, 2058, 3287, 4158, 4377, 4791, 5825
BplI GAGNNNNNCTC 8 cut(s) 1858, 1890, 2282, 2314, 4753, 4785, 5293, 5325
Bpu10I CCTNAGC 1 cut(s) 4428
BpuEI CTTGAG 8 cut(s) 665, 834, 1112, 1166, 1332, 1338, 2879, 4755
BpuMI CCSGG 2 cut(s) 1018, 1019
BsaBI GATNNNNATC 3 cut(s) 2726, 2732, 5055
BsaI GGTCTC 3 cut(s) 992, 2940, 5905
BsaJI CCNNGG 9 cut(s) 297, 922, 1017, 1650, 2203, 3354, 4044, 4959, 5282
BsaWI WCCGGW 1 cut(s) 2321
Bsc4I CCNNNNNNNGG 9 cut(s) 374, 1900, 3406, 3427, 3478, 4021, 4692, 5235, 5283
Bse1I ACTGG 9 cut(s) 216, 404, 453, 882, 2251, 2383, 3462, 3675, 4618
Bse21I CCTNAGG 2 cut(s) 352, 5840
Bse3DI GCAATG 6 cut(s) 132, 1145, 1876, 2300, 4411, 5206
Bse8I GATNNNNATC 3 cut(s) 2726, 2732, 5055
BseAI TCCGGA 1 cut(s) 2321
BseBI CCWGG 9 cut(s) 284, 552, 689, 995, 1652, 2204, 2474, 5216, 5246
BseDI CCNNGG 9 cut(s) 297, 922, 1017, 1650, 2203, 3354, 4044, 4959, 5282
BseJI GATNNNNATC 3 cut(s) 2726, 2732, 5055
BseLI CCNNNNNNNGG 9 cut(s) 374, 1900, 3406, 3427, 3478, 4021, 4692, 5235, 5283
BseMI GCAATG 6 cut(s) 132, 1145, 1876, 2300, 4411, 5206
BseNI ACTGG 9 cut(s) 216, 404, 453, 882, 2251, 2383, 3462, 3675, 4618
BseRI GAGGAG 9 cut(s) 233, 1574, 1856, 2471, 3068, 3385, 3830, 4777, 5678
BseYI CCCAGC 2 cut(s) 826, 2911
BsgI GTGCAG 5 cut(s) 2981, 3141, 3880, 3980, 5600
BshFI GGCC 3 cut(s) 366, 4616, 4958
BsiHKAI GWGCWC 5 cut(s) 204, 1566, 2340, 3087, 4769
BsiHKCI CYCGRG 2 cut(s) 197, 1017
BsiSI CCGG 2 cut(s) 1018, 2322
BslFI GGGAC 2 cut(s) 65, 465
BslI CCNNNNNNNGG 9 cut(s) 374, 1900, 3406, 3427, 3478, 4021, 4692, 5235, 5283
BsmBI CGTCTC 1 cut(s) 3212
BsmFI GGGAC 2 cut(s) 65, 465
BsmI GAATGC 6 cut(s) 602, 1615, 1982, 2113, 2719, 3013
BsnI GGCC 3 cut(s) 366, 4616, 4958
Bso31I GGTCTC 3 cut(s) 992, 2940, 5905
BsoBI CYCGRG 2 cut(s) 197, 1017
Bsp1286I GDGCHC 6 cut(s) 204, 870, 1566, 2340, 3087, 4769
Bsp13I TCCGGA 1 cut(s) 2321
Bsp19I CCATGG 1 cut(s) 297
BspACI CCGC 6 cut(s) 578, 1358, 1459, 1469, 1570, 5573
BspANI GGCC 3 cut(s) 366, 4616, 4958
BspEI TCCGGA 1 cut(s) 2321
BspHI TCATGA 5 cut(s) 204, 610, 3448, 4498, 5395
BspLI GGNNCC 4 cut(s) 496, 2566, 5031, 5220
BspMAI CTGCAG 3 cut(s) 1291, 1608, 2658
BspMI ACCTGC 2 cut(s) 1800, 2618
BspPI GGATC 6 cut(s) 1993, 3105, 3369, 5213, 5226, 5722
BspQI GCTCTTC 2 cut(s) 1626, 2367
BspTI CTTAAG 3 cut(s) 533, 601, 3383
BspTNI GGTCTC 3 cut(s) 992, 2940, 5905
BsrDI GCAATG 6 cut(s) 132, 1145, 1876, 2300, 4411, 5206
BsrI ACTGG 9 cut(s) 216, 404, 453, 882, 2251, 2383, 3462, 3675, 4618
BssECI CCNNGG 9 cut(s) 297, 922, 1017, 1650, 2203, 3354, 4044, 4959, 5282
BssT1I CCWWGG 5 cut(s) 297, 922, 3354, 4044, 4959
Bst2UI CCWGG 9 cut(s) 284, 552, 689, 995, 1652, 2204, 2474, 5216, 5246
BstAFI CTTAAG 3 cut(s) 533, 601, 3383
BstAPI GCANNNNNTGC 3 cut(s) 1612, 3064, 5479
BstC8I GCNNGC 7 cut(s) 711, 1047, 1581, 2429, 2574, 2592, 5430
BstDSI CCRYGG 1 cut(s) 297
BstENI CCTNNNNNAGG 2 cut(s) 3404, 3425
BstHHI GCGC 2 cut(s) 282, 5883
BstNI CCWGG 9 cut(s) 284, 552, 689, 995, 1652, 2204, 2474, 5216, 5246
BstNSI RCATGY 3 cut(s) 2278, 2576, 2804
BstSFI CTRYAG 7 cut(s) 226, 743, 1287, 1604, 2654, 2864, 5374
BstV2I GAAGAC 7 cut(s) 947, 2058, 3287, 4158, 4377, 4791, 5825
BstX2I RGATCY 7 cut(s) 2727, 2755, 3110, 3374, 5218, 5415, 5714
BstXI CCANNNNNNTGG 1 cut(s) 5659
BstYI RGATCY 7 cut(s) 2727, 2755, 3110, 3374, 5218, 5415, 5714
Bsu36I CCTNAGG 2 cut(s) 352, 5840
BsuI GTATCC 1 cut(s) 1309
BsuRI GGCC 3 cut(s) 366, 4616, 4958
BtgI CCRYGG 1 cut(s) 297
BtsIMutI CAGTG 6 cut(s) 446, 1244, 3087, 3455, 3682, 5863
BveI ACCTGC 2 cut(s) 1800, 2618
Cac8I GCNNGC 7 cut(s) 711, 1047, 1581, 2429, 2574, 2592, 5430
CaiI CAGNNNCTG 8 cut(s) 374, 1064, 1456, 1549, 3067, 3106, 5179, 5449
CciI TCATGA 5 cut(s) 204, 610, 3448, 4498, 5395
CfoI GCGC 2 cut(s) 282, 5883
Cfr13I GGNCC 5 cut(s) 365, 377, 691, 3397, 4615
Cfr9I CCCGGG 1 cut(s) 1017
CseI GACGC 3 cut(s) 39, 3229, 3332
CsiI ACCWGGT 1 cut(s) 687
CspCI CAANNNNNGTGG 4 cut(s) 2206, 2241, 4533, 4568
DraI TTTAAA 1 cut(s) 2488
DrdI GACNNNNNNGTC 2 cut(s) 5314, 5391
DseDI GACNNNNNNGTC 2 cut(s) 5314, 5391
EciI GGCGGA 1 cut(s) 1484
Ecl136II GAGCTC 3 cut(s) 202, 2338, 4767
Eco130I CCWWGG 5 cut(s) 297, 922, 3354, 4044, 4959
Eco147I AGGCCT 1 cut(s) 4958
Eco24I GRGCYC 4 cut(s) 204, 870, 2340, 4769
Eco31I GGTCTC 3 cut(s) 992, 2940, 5905
Eco32I GATATC 4 cut(s) 987, 1155, 1931, 4803
Eco47I GGWCC 3 cut(s) 377, 691, 3397
Eco53kI GAGCTC 3 cut(s) 202, 2338, 4767
Eco81I CCTNAGG 2 cut(s) 352, 5840
Eco88I CYCGRG 2 cut(s) 197, 1017
EcoICRI GAGCTC 3 cut(s) 202, 2338, 4767
EcoNI CCTNNNNNAGG 2 cut(s) 3404, 3425
EcoO109I RGGNCCY 1 cut(s) 691
EcoRI GAATTC 2 cut(s) 2879, 3076
EcoRII CCWGG 9 cut(s) 282, 550, 687, 993, 1650, 2202, 2472, 5214, 5244
EcoRV GATATC 4 cut(s) 987, 1155, 1931, 4803
EcoT14I CCWWGG 5 cut(s) 297, 922, 3354, 4044, 4959
EcoT38I GRGCYC 4 cut(s) 204, 870, 2340, 4769
ErhI CCWWGG 5 cut(s) 297, 922, 3354, 4044, 4959
Esp3I CGTCTC 1 cut(s) 3212
FaqI GGGAC 2 cut(s) 65, 465
FauI CCCGC 1 cut(s) 571
FauNDI CATATG 1 cut(s) 4630
FbaI TGATCA 8 cut(s) 129, 259, 2832, 4057, 4842, 5110, 5170, 5599
FblI GTMKAC 1 cut(s) 5458
FriOI GRGCYC 4 cut(s) 204, 870, 2340, 4769
FspBI CTAG 6 cut(s) 663, 990, 2024, 2595, 3215, 4316
GlaI GCGC 2 cut(s) 281, 5882
GsaI CCCAGC 2 cut(s) 830, 2915
HaeIII GGCC 3 cut(s) 366, 4616, 4958
HapII CCGG 2 cut(s) 1018, 2322
HgaI GACGC 3 cut(s) 39, 3229, 3332
HhaI GCGC 2 cut(s) 282, 5883
Hin6I GCGC 2 cut(s) 280, 5881
HinP1I GCGC 2 cut(s) 280, 5881
HincII GTYRAC 1 cut(s) 660
HindII GTYRAC 1 cut(s) 660
HindIII AAGCTT 7 cut(s) 1641, 1850, 2282, 3389, 3767, 4136, 4700
HpaI GTTAAC 1 cut(s) 660
HpaII CCGG 2 cut(s) 1018, 2322
HphI GGTGA 6 cut(s) 1492, 3322, 3605, 5554, 5782, 5795
Hpy166II GTNNAC 9 cut(s) 591, 660, 2093, 2126, 2535, 2957, 3692, 5072, 5459
Hpy8I GTNNAC 9 cut(s) 591, 660, 2093, 2126, 2535, 2957, 3692, 5072, 5459
HpyCH4IV ACGT 2 cut(s) 2643, 5465
HpySE526I ACGT 2 cut(s) 2643, 5465
HspAI GCGC 2 cut(s) 280, 5881
Kpn2I TCCGGA 1 cut(s) 2321
Ksp22I TGATCA 8 cut(s) 129, 259, 2832, 4057, 4842, 5110, 5170, 5599
KspAI GTTAAC 1 cut(s) 660
LguI GCTCTTC 2 cut(s) 1626, 2367
MabI ACCWGGT 1 cut(s) 687
MaeI CTAG 6 cut(s) 663, 990, 2024, 2595, 3215, 4316
MaeII ACGT 2 cut(s) 2643, 5465
MfeI CAATTG 6 cut(s) 3498, 3647, 3711, 4016, 4347, 4890
MflI RGATCY 7 cut(s) 2727, 2755, 3110, 3374, 5218, 5415, 5714
MhlI GDGCHC 6 cut(s) 204, 870, 1566, 2340, 3087, 4769
MmeI TCCRAC 9 cut(s) 522, 2823, 3219, 3633, 3904, 4002, 4063, 4582, 5640
MroI TCCGGA 1 cut(s) 2321
MroXI GAANNNNTTC 5 cut(s) 309, 3294, 3721, 4479, 5625
MslI CAYNNNNRTG 4 cut(s) 441, 2432, 3633, 4002
MspA1I CMGCKG 2 cut(s) 1181, 5584
MspCI CTTAAG 3 cut(s) 533, 601, 3383
MspI CCGG 2 cut(s) 1018, 2322
MunI CAATTG 6 cut(s) 3498, 3647, 3711, 4016, 4347, 4890
Mva1269I GAATGC 6 cut(s) 602, 1615, 1982, 2113, 2719, 3013
MvaI CCWGG 9 cut(s) 284, 552, 689, 995, 1652, 2204, 2474, 5216, 5246
NciI CCSGG 2 cut(s) 1018, 1019
NcoI CCATGG 1 cut(s) 297
NdeI CATATG 1 cut(s) 4630
NlaIV GGNNCC 4 cut(s) 496, 2566, 5031, 5220
NmeAIII GCCGAG 1 cut(s) 5224
NmuCI GTSAC 3 cut(s) 56, 3244, 3677
NspI RCATGY 3 cut(s) 2278, 2576, 2804
OliI CACNNNNGTG 2 cut(s) 2432, 4002
PaeI GCATGC 1 cut(s) 2576
PagI TCATGA 5 cut(s) 204, 610, 3448, 4498, 5395
PceI AGGCCT 1 cut(s) 4958
PciI ACATGT 1 cut(s) 2800
PciSI GCTCTTC 2 cut(s) 1626, 2367
PctI GAATGC 6 cut(s) 602, 1615, 1982, 2113, 2719, 3013
PdmI GAANNNNTTC 5 cut(s) 309, 3294, 3721, 4479, 5625
PflMI CCANNNNNTGG 2 cut(s) 374, 4021
PfoI TCCNGGA 2 cut(s) 550, 5214
PpuMI RGGWCCY 1 cut(s) 691
PscI ACATGT 1 cut(s) 2800
PshBI ATTAAT 1 cut(s) 5595
Psp124BI GAGCTC 3 cut(s) 204, 2340, 4769
Psp5II RGGWCCY 1 cut(s) 691
Psp6I CCWGG 9 cut(s) 282, 550, 687, 993, 1650, 2202, 2472, 5214, 5244
PspFI CCCAGC 2 cut(s) 826, 2911
PspGI CCWGG 9 cut(s) 282, 550, 687, 993, 1650, 2202, 2472, 5214, 5244
PspN4I GGNNCC 4 cut(s) 496, 2566, 5031, 5220
PspPI GGNCC 5 cut(s) 365, 377, 691, 3397, 4615
PspPPI RGGWCCY 1 cut(s) 691
PstI CTGCAG 3 cut(s) 1291, 1608, 2658
PstNI CAGNNNCTG 8 cut(s) 374, 1064, 1456, 1549, 3067, 3106, 5179, 5449
PsuI RGATCY 7 cut(s) 2727, 2755, 3110, 3374, 5218, 5415, 5714
PvuII CAGCTG 2 cut(s) 1181, 5584
RseI CAYNNNNRTG 4 cut(s) 441, 2432, 3633, 4002
SacI GAGCTC 3 cut(s) 204, 2340, 4769
SapI GCTCTTC 2 cut(s) 1626, 2367
Sau96I GGNCC 5 cut(s) 365, 377, 691, 3397, 4615
SbfI CCTGCAGG 1 cut(s) 2658
ScaI AGTACT 3 cut(s) 2507, 2988, 5045
SdaI CCTGCAGG 1 cut(s) 2658
SduI GDGCHC 6 cut(s) 204, 870, 1566, 2340, 3087, 4769
SexAI ACCWGGT 1 cut(s) 687
SfcI CTRYAG 7 cut(s) 226, 743, 1287, 1604, 2654, 2864, 5374
SinI GGWCC 3 cut(s) 377, 691, 3397
SmaI CCCGGG 1 cut(s) 1019
SmiMI CAYNNNNRTG 4 cut(s) 441, 2432, 3633, 4002
SpeI ACTAGT 1 cut(s) 662
SphI GCATGC 1 cut(s) 2576
Sse8387I CCTGCAGG 1 cut(s) 2658
SseBI AGGCCT 1 cut(s) 4958
SsiI CCGC 6 cut(s) 578, 1358, 1459, 1469, 1570, 5573
SspI AATATT 1 cut(s) 3273
SspMI CTAG 6 cut(s) 663, 990, 2024, 2595, 3215, 4316
SstI GAGCTC 3 cut(s) 204, 2340, 4769
StuI AGGCCT 1 cut(s) 4958
StyI CCWWGG 5 cut(s) 297, 922, 3354, 4044, 4959
TaiI ACGT 2 cut(s) 2646, 5468
TaqI TCGA 7 cut(s) 292, 2289, 2340, 2898, 2946, 5311, 5383
TaqII GACCGA 1 cut(s) 2595
TatI WGTACW 9 cut(s) 180, 963, 1131, 1264, 1308, 1772, 2505, 2986, 5043
TscAI CASTG 6 cut(s) 453, 1251, 3087, 3462, 3682, 5863
TseFI GTSAC 3 cut(s) 56, 3244, 3677
Tsp45I GTSAC 3 cut(s) 56, 3244, 3677
TspGWI ACGGA 4 cut(s) 4127, 4460, 4892, 5314
TspMI CCCGGG 1 cut(s) 1017
TspRI CASTG 6 cut(s) 453, 1251, 3087, 3462, 3682, 5863
Van91I CCANNNNNTGG 2 cut(s) 374, 4021
Vha464I CTTAAG 3 cut(s) 533, 601, 3383
VpaK11BI GGWCC 3 cut(s) 377, 691, 3397
VspI ATTAAT 1 cut(s) 5595
XagI CCTNNNNNAGG 2 cut(s) 3404, 3425
XbaI TCTAGA 2 cut(s) 3214, 4315
XceI RCATGY 3 cut(s) 2278, 2576, 2804
XmaI CCCGGG 1 cut(s) 1017
XmiI GTMKAC 1 cut(s) 5458
XmnI GAANNNNTTC 5 cut(s) 309, 3294, 3721, 4479, 5625
XspI CTAG 6 cut(s) 663, 990, 2024, 2595, 3215, 4316
ZrmI AGTACT 3 cut(s) 2507, 2988, 5045
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.