FvH4_4g00822

KIP1-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0006118
Physical Location & Seq
Forward (+)
733785 .. 742008
8224 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g00822.t1

Sequence Viewer

Length: 5940 bp
ATGGCAACCCTGTTACAATCCGAGTCCAGACGCTTGTATTCTTGGTGGTGGGATAGTCACATTAGCCCAAAGAACTCAAAATGGCTTCAGGAAAATCTTACAGATATGGATGCTAAAGTCAAAGCAATGATAAAGCTCATTGAAGAAGATGCAGACTCTTTTGCAAGGAGAGCAGAAATGTACTACAAGAAACGCCCCGAGCTCATGAAACTGGTTGAGGAGTTCTATAGAGCTTATCGTGCATTGGCTGAGAGGTATGATCATGCTACTGGGGAGCTGCGCCAGGCTCATCGAACCATGGCAGAAGCATTTCCCAACCAAGTACCTTATGAACTGGCCGATGAATCATCCTCCTGCTCTTATGGCCCAGAGGCTGGACCTCATACACCAGAAATGCTGCATCCAGTTCGTGCCTTATTCGACTCAGATGACTTGCATAAGGATGCATTGGGACTCTCTTCAACTGATTTACATGCTTTGAAAAGGAATGGAGGCTCCGACTCTGGAATAAGCAAAAGAGGTCTGAAGCAGCTCAAGGAAATGTTCGATCCAGGAGAAGAATTTATTCCACCGAAGGTTGCGGAGGGAAGATTTACAGGAGGCTTGAGTTTTCATGAAGCAGATGAGAGCAAACCAAAGTTACAGAACGGGTATTCTCAATTAACAAGTGAGAACCAGAGTCTAAAGAACCAGCTCCTCTCTCAATCTGAGCGTGCTGCAAAAGCTGAAACTGAAATTCAAATCTTACACAAAACTCTATCTGAGATACAAGTTGAAAAGGACACAGTCCATCTTCAGTACCAGCAGAGTTTGGAGAAGTTATCTGAGCTGGGTAAAGAACTGAACAGTGCTCAAGAGGCTGCTGGAGGGCTCAATGAACGAGCCAGCAAAGCTGATATTGAAATTACAATACTGAAGGAAGCCCTTGGGGAATTAGAAGCTGAGAGAGATGCCGGTCTTCATCAGTACAATCGGTGCTTGGAAAGGATATCTAGCATGGAGACCATGTTATCTTTTTCCCGGGAGGATGCAAAAGGGCTTAATGAGCGAGCTGTTAAAGCAGAAACTGAAGCTCAAAATCTCAAGCAAGAACTTTTCAAATTAGAGGCAGAAAAGGATGCCTGTTTTCTCAAGTACAAGCAATGTCTTGAGAAGATATCTGCTTTGGAGGCTACAATCTCACTTGATGAAGAAAATGCCAGAATCCTTAATGACCAAATTGAAAGAGCTGAAAATGAAGTTAGATCACTAAAGGAATTGGTTGCTGTACTGAAGGAAGAGAAAGAGTCTGCAGCTCTACAATTCAAGCACTACATGGATACAATAGCTGAGATGGAAAGAAAACTTTCACAAGCTCAAGAGGATGCGGAAAGATTGAACAGTGTAATTTTGACAGGGGCAGCAAAGTTAAAGGGTGCCGAAGAACAATGTGTTCTCTTGGAGAGATCAAATCAGTCCCTGCGGTTAGAGGCAGATGGTTTGGTGAAGAAGATTGCAACTAAAGATGAAGAACTTTCAGACAAAAATGATGAGATGGAGAAACTTCAGAATCTAATGCAAGAGGAGCACTTGCGGTTTGTGCAAGCTGAAGCCACTCTCCAATTTCTGCAGAAGTTGCACTCTCAATCCCAAGAAGAGCAGAAAGCTTTAGCTTTGGAGTTCAAAAATGGGCTTCAGATGTTGAAGGACTTGGAGATGAGCAAACATGGTGTGGAGGATGATATGCAAAGGGTTAAGGAAGAAAATAAGAGCTTGAATGAACTGAACTTCTCTTGCACTATCTCCATTAGGAACCTGCAAGATGAAATATTTAGCATGAAGGAGATGAAAGAGAAACTTGAAGAGGAGGTTAAGCTTAAAACAGACCAAAGCAATGCTCTCCAGAGTCAAATTTCCCATTTGGAGGATGAAATTAAGGGGTTGAGTGGAAGATATCAGGCTATAGTGGAGCAAGTGGAATCAGTAGGTTTAACTTCTGAACGCCTTGGATCGTCGGTGAAAGACTTGCAAAATGAAAAGTCAAGGCTAGAGGATATCTGCACAAGGGATAGAGAGGACAGAGAACATCTTTATGAGAAGTTGAAGGATATGGGCAAACTTTCAAAGGAGAATGCTGTTCTGGAGGGTTCACTTGCAGGTTTGAATGGGGAGTTGGAGGGTTTGAGAGGGAAGGTCAAGGAATTGCAGGAGTCTTGCCTCTTCCTCCAAGGAGAAAAAGCCACTCTTGTTGCTGAGAAATTCGCCCTGCTTTCCCAGTTGCAAATTATCACTCAGAATATGCACAAGCTTTTCGAGAAGAACTCCTTGCTGGAAAGTTCCCTCTCTGGAGCAAACATTGAGCTTGAAAGGTTGAGGGCAAGAGCAAAGAGCTTAGAGGAGCTGTGCCAGGTACTTAATAATGAGAAGTCCAATCTTCTTAATGAGAGAGGCACCTTGGTGTTTCGGTTAAATGATGTTGAGGAGAGACTGAGAGGCCTGGAGAAGAGGTTTAAAAAATTAGAGAAGAAGTATTCTAAAATGGAGAAGGAGAAAGAGTCCACCCTTGATGCAGTAGAAGAATTACGGGATTCCTTGCATGCAGAAAAACGAGAGCGTGCTAGTTATATTCGGTCAAGTGAATCGCGAATGGCAGGTTTGGAAAGCAATGTCCATCTCCTGCAGGAGGAGAGAAGGTTGGGAAAGAAAGAATTTGAAAAAGAACTAGATAAAGCTGTGAATGCCCAGATTGAGATCTTTATCCTTCAGAAGTTTATTCAAGATCTGGAAGAGAAGAATTCGACAATATACATTGAATGTCAGAGACATATTGAGGCCTCCAAGTTTTCTGATAAGCTGATCAAAGAGTTGGAGAGTGAAAATCTTGAGCTACAGGTGGAAGAAGAATTCTTAGTAGAAGAAATTGAAAAGTTGAGGCTGGGAATTTATCAAGTGTTCAGGGCTCTGCAGATTGAAACAGGTTCACATGAAGATAAGGTTGAGAGAGAAAAAGTACTTGTACTGCACATTTTGAATGCTATCAAGGACTTGAAAAGTTCTCTGGTGTGGAGCAAAGATGAGGAGCAGCAGTTGCTGGTTGAGAATTCAGTGCTCCTAACTTTACTTGGGGAGCTAAGCTCAGAAGGTGCAGAGATAGAGTCGGCAAAACAAACTTTGGGGCAGGAGTATGAGGTAATGGCAGACCGTTGTGCTATGCTACAAAATAACAAGCATGAGCTTCTAGAGATGCAAAGGCAGTTGAGGTTGGAAGTGACTGAGAAAGAGCAAAAGGAGGAAACATTAGAGGCTGAATTGAAAAGTCTTCAAGGTAAGCTGAAGAGTCTGCAAGATGCATACCAAATTTTGCAGGAAGAACAGTCCAAGGTGCTTGAAGAGAGGAGATCCTTGCTTGAGAAGCTTTTGGACCTGAAAAAGAAAAATAAAATCCTTGAAGAGGATAATGATGTTAATTTTCATGAAGCACTAGCTTTCAGCAACCTCTCTATGGTTTTAGAGAGCTTCACAATTGAGAAAGTTGTGAAACTAAAAGCACTTGCTGACGATCTTGATGATCTTGCTGCTACTAACAATGACCTCAAAGATGCAGTTGGAACGTTGGGGGAGAAGTTAGTGGTGAAAGAAGTAGAGAATCAACATCTGAATGAGATGGTTCAATTTTTGGACAAGGAACTTTATGAAGCCAATGACTTAAATGGTATATTAAGCCATCAAATTTCAAGTGTAAAGGATTCTCTCAAACAGAAAACCATGAAGCTCTCAGAGGTAGAAGAGAAGCTTCAAAAGACAGAGAGCTTGAATGTGGAATTATGCAGAACTGTTGAGGAGCTGAAGATGGAATATGAAGAGTCCAAAATAATGAGTCATAATTGTGAGAAGCAGATTCTCCAACTATCTGAAGTCTGCAGAAATCAGAAGAAGGAAATGAATAGCCTTTGCGAAGCAAATGAAATTCTGGAGGATGAAATCTTATGTAAAGCTATTGAAAAAGAAATAGAAACTCTGCACCTGAATGAGACAGTCCATTTGTTGGACAGAGAATTGTGTGAAGCGAAGCACTCGAATGAACAACTGAGCAATCAAGTTTTAGTTGGAAAAGATTGTCTGAAACAGAAAACTACGGAGCTTTCAGAAGCAGAAGAGAAGCTTAGACAGATAGAAGACTTGAATGTTGACCTATGCAGAAATGTTCAGGAACTGAAGGTGCAACAACAAGAATCAACATTCACAAGAGAAACTTACGAGAAAGAGATTGTGGAACTTCTTAAAGATAACACAGATCAGAAAATGGAAATTGAGATCCTTCATGAAGCAAACGGAACTCTAGAGAGTGAAGTGGGTGTCTTATGTGAAGCAATTGAAGAATACAAAATTCGAGAAGACTTTATGAGTTCAGAGCTGCAAGAAAGAAGCAATGAGTTTGAACTCTGGGAGGCTGAGGCTACTACTTTCTACTTCGATCTTCATAATTCTGCTGTCCGTGAAGTTTTTCTTGAAGATAAGGTTCATGAGCTTACAGAAGTTTGTGAGAGAATTAAAGATGAAGATGCTGCAAAATCTGTGGGGATCGAACAGATGAAAGAAAGAGTTGGCATCTTGGAAAGTGAAGTTGGAGGTTTGACGTCTCAGTTGTCTGCATATGCTCCTGCTATAGCCTCTTTGAGAGAGAATGTAATTTCTCTTCAGCATAATGCCCTTCTTAGAAACAAGCTCTTTGTGGAAGACAACCAGCAACACAAGGATGATGACCTGCCAAAGAATCTATATCAGAGGAGCTCTCAAGGTTACAAAGAAGACCAAAGCACTTTGTTGCCACATGGAATTTCTGAATTGGAAGAAATGCAGACTATGATCAAAGAAGTCGAAAAGGCAGTTATTGAAGAAACAAAAAGGCTTTCAATTGAATTAATTGAAAAGGAAATGGTGGAAGAAATTGAAAGGCTTACAACAAAGGAAAGGGCAGAGGCTTTGGTGCAGACTGAAGAAGTAAAATCAAAAGGTAACTTGCATCAAGAAAATGGTAGTAAAGGAGAAGAGGCGGAACATGTGATTGAGTACACTGATGATACTCTGAAGAGGAGTAAACCTGAAAAAAGGCTTTTGACGAAAGACATTCCGCTTGATCATGTTTCAAATTCTTCATTCTATGGAAGAAGCAGAAGAAAGAGTGGCAGGGCTGATGATCAGATGCTCGAGTTATGGGAAGCAGCTGAGCAGCATTGCGTCCAGGATCCAGGGGCCAATATCTGGAAAAACCAGGCATCTCCACCAACTGAAGATGTTACTCCCTACCCTCGGTTGGCAAACTCAAGGAGGACAAGTCGAAAGTCTTCTTCCGAAGTTCAGGTTGAGAAGGACTTGGGCATTGACAAGCTGGAAGTGTCCTACAATATTCGACAACCAAGTCGCGATGGCAAGAAGGAAAAGATCTTGGAGAGGCTTGCTTCTGATGATCAGAAACTGATGAGTCTACAAACGTCTGTGCAAGACTTGCATAAGAAGGTGGAGACCAACAAGAAGGGTAAGAAGATCAACAGCTCTGAATATGAGACAGTGAAAAGACAGTTGCACGAAGTTGAGGACGCAGTTGTGCAGCTGGTGGATGTTAATGATCAGTTGAAAAAGGATGTTGAAGAGTTTCCATCTTTGGACGAGCAGACATCCATAGAGTTGGAGGAGGCAGGAAATGTACGCAGAGAGAAAGTAACCGAACAAGCATGGAAAGGATCTGAGAAGATTGGAAGGCTGCAGTTTGAGCTGCAGAACATCCAATATGTTTTGGTGAAATGGGAGGGTGAAAAGAAACGGAAAGGGAGGCATGGATTTTATGTGAGTAGAACAGGTCTTCTCCTGAGGGATTTTATTTACAGTGGCAGAAGTAGTAGTGAAAGGCGCAAGAAAGGTTGTTTATGTGGTTGCATGAGACCATCAGCAAATGTTGAATAA

Protein Analysis

1980

Amino Acids

227.49

Weight (kDa)

5.06

Isoelectric Point (pI)

54.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
KIP1 PF07765 14 - 87 2.3e-38 KIP1-like protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 5397
AatII GACGTC 1 cut(s) 4619
Acc36I ACCTGC 4 cut(s) 1803, 2126, 2621, 4752
AccB1I GGYRCC 2 cut(s) 1415, 2429
AccB7I CCANNNNNTGG 3 cut(s) 374, 4024, 5241
AccI GTMKAC 1 cut(s) 5464
AccII CGCG 2 cut(s) 2623, 5403
AciI CCGC 6 cut(s) 581, 1367, 1462, 1573, 5033, 5111
AclI AACGTT 1 cut(s) 3590
AclWI GGATC 8 cut(s) 542, 1996, 3372, 4288, 4568, 5219, 5232, 5728
AcoI YGGCCR 1 cut(s) 336
AcyI GRCGYC 1 cut(s) 4616
AfiI CCNNNNNNNGG 9 cut(s) 374, 1903, 2662, 3430, 3481, 4024, 5241, 5289, 5293
AflIII ACRYGT 1 cut(s) 5038
AjnI CCWGG 7 cut(s) 282, 550, 2385, 2475, 5220, 5227, 5250
AjuI GAANNNNNNNTTGG 4 cut(s) 2135, 2167, 4587, 4619
AleI CACNNNNGTG 1 cut(s) 2435
Alw21I GWGCWC 5 cut(s) 204, 853, 1569, 3090, 4772
Alw26I GTCTC 8 cut(s) 995, 2458, 2794, 4004, 4623, 5495, 5537, 5911
AlwI GGATC 8 cut(s) 542, 1996, 3372, 4288, 4568, 5219, 5232, 5728
AlwNI CAGNNNCTG 6 cut(s) 374, 1067, 1459, 3070, 4192, 5455
Ama87I CYCGRG 3 cut(s) 197, 1020, 5186
AoxI GGCC 5 cut(s) 336, 364, 2473, 2811, 5232
ArsI GACNNNNNNTTYG 2 cut(s) 4003, 4035
AseI ATTAAT 1 cut(s) 4901
Asp700I GAANNNNTTC 6 cut(s) 309, 564, 1345, 4482, 5323, 5631
AspLEI GCGC 2 cut(s) 282, 5889
AspS9I GGNCC 4 cut(s) 365, 377, 3400, 5232
AsuC2I CCSGG 2 cut(s) 1021, 1022
AsuHPI GGTGA 5 cut(s) 1495, 2008, 3622, 5788, 5801
AvaI CYCGRG 3 cut(s) 197, 1020, 5186
AvaII GGWCC 2 cut(s) 377, 3400
AxyI CCTNAGG 1 cut(s) 5846
BamHI GGATCC 1 cut(s) 5224
BanI GGYRCC 2 cut(s) 1415, 2429
BanII GRGCYC 4 cut(s) 204, 873, 2941, 4772
BarI GAAGNNNNNNTAC 2 cut(s) 4659, 4691
BbsI GAAGAC 8 cut(s) 950, 3290, 4161, 4380, 4722, 4794, 5316, 5831
Bbv12I GWGCWC 5 cut(s) 204, 853, 1569, 3090, 4772
BbvCI CCTCAGC 1 cut(s) 4431
BcgI CGANNNNNNTGC 2 cut(s) 389, 423
BciT130I CCWGG 7 cut(s) 284, 552, 2387, 2477, 5222, 5229, 5252
BciVI GTATCC 1 cut(s) 1312
BclI TGATCA 7 cut(s) 259, 2835, 4845, 5116, 5176, 5446, 5605
BcnI CCSGG 2 cut(s) 1021, 1022
BcoDI GTCTC 8 cut(s) 995, 2458, 2794, 4004, 4623, 5495, 5537, 5911
BfaI CTAG 7 cut(s) 993, 2027, 2598, 2702, 3218, 3461, 4319
BfuAI ACCTGC 4 cut(s) 1803, 2126, 2621, 4752
BfuI GTATCC 1 cut(s) 1312
BglII AGATCT 3 cut(s) 2730, 2758, 5421
BlpI GCTNAGC 2 cut(s) 3110, 5205
BmcAI AGTACT 1 cut(s) 2991
Bme1390I CCNGG 9 cut(s) 284, 552, 1021, 1022, 2387, 2477, 5222, 5229, 5252
Bme18I GGWCC 2 cut(s) 377, 3400
BmeT110I CYCGRG 3 cut(s) 197, 1020, 5186
BmgT120I GGNCC 4 cut(s) 365, 377, 3400, 5232
BmiI GGNNCC 6 cut(s) 496, 1417, 1793, 2431, 5226, 5233
BmrFI CCNGG 9 cut(s) 284, 552, 1021, 1022, 2387, 2477, 5222, 5229, 5252
BmrI ACTGGG 2 cut(s) 279, 2248
BmuI ACTGGG 2 cut(s) 279, 2248
BpiI GAAGAC 8 cut(s) 950, 3290, 4161, 4380, 4722, 4794, 5316, 5831
BplI GAGNNNNNCTC 6 cut(s) 2285, 2317, 3098, 3130, 4756, 4788
BpmI CTGGAG 6 cut(s) 885, 1865, 2141, 2346, 2498, 3971
Bpu10I CCTNAGC 1 cut(s) 4431
Bpu1102I GCTNAGC 2 cut(s) 3110, 5205
BpuMI CCSGG 2 cut(s) 1021, 1022
BsaBI GATNNNNATC 2 cut(s) 2729, 2735
BsaHI GRCGYC 1 cut(s) 4616
BsaI GGTCTC 3 cut(s) 995, 5495, 5911
BsaJI CCNNGG 9 cut(s) 297, 925, 1020, 1984, 2206, 2433, 3357, 5228, 5288
Bsc4I CCNNNNNNNGG 9 cut(s) 374, 1903, 2662, 3430, 3481, 4024, 5241, 5289, 5293
Bse118I RCCGGY 1 cut(s) 953
Bse1I ACTGG 5 cut(s) 216, 274, 339, 404, 2254
Bse21I CCTNAGG 1 cut(s) 5846
Bse3DI GCAATG 6 cut(s) 132, 1148, 1879, 2650, 4414, 5212
Bse8I GATNNNNATC 2 cut(s) 2729, 2735
BseBI CCWGG 7 cut(s) 284, 552, 2387, 2477, 5222, 5229, 5252
BseDI CCNNGG 9 cut(s) 297, 925, 1020, 1984, 2206, 2433, 3357, 5228, 5288
BseJI GATNNNNATC 2 cut(s) 2729, 2735
BseLI CCNNNNNNNGG 9 cut(s) 374, 1903, 2662, 3430, 3481, 4024, 5241, 5289, 5293
BseMI GCAATG 6 cut(s) 132, 1148, 1879, 2650, 4414, 5212
BseNI ACTGG 5 cut(s) 216, 274, 339, 404, 2254
BseYI CCCAGC 2 cut(s) 829, 2914
BsgI GTGCAG 6 cut(s) 2023, 2984, 3144, 3983, 4988, 5606
Bsh1236I CGCG 2 cut(s) 2623, 5403
BshFI GGCC 5 cut(s) 338, 366, 2475, 2813, 5234
BshNI GGYRCC 2 cut(s) 1415, 2429
BsiHKAI GWGCWC 5 cut(s) 204, 853, 1569, 3090, 4772
BsiHKCI CYCGRG 3 cut(s) 197, 1020, 5186
BsiSI CCGG 2 cut(s) 954, 1021
BslFI GGGAC 2 cut(s) 465, 1441
BslI CCNNNNNNNGG 9 cut(s) 374, 1903, 2662, 3430, 3481, 4024, 5241, 5289, 5293
BsmAI GTCTC 8 cut(s) 995, 2458, 2794, 4004, 4623, 5495, 5537, 5911
BsmBI CGTCTC 1 cut(s) 4623
BsmFI GGGAC 2 cut(s) 465, 1441
BsmI GAATGC 3 cut(s) 2116, 2722, 3016
BsnI GGCC 5 cut(s) 338, 366, 2475, 2813, 5234
Bso31I GGTCTC 3 cut(s) 995, 5495, 5911
BsoBI CYCGRG 3 cut(s) 197, 1020, 5186
Bsp1286I GDGCHC 7 cut(s) 204, 853, 873, 1569, 2941, 3090, 4772
Bsp1720I GCTNAGC 2 cut(s) 3110, 5205
Bsp19I CCATGG 1 cut(s) 297
Bsp68I TCGCGA 2 cut(s) 2623, 5403
BspACI CCGC 6 cut(s) 581, 1367, 1462, 1573, 5033, 5111
BspANI GGCC 5 cut(s) 338, 366, 2475, 2813, 5234
BspFNI CGCG 2 cut(s) 2623, 5403
BspHI TCATGA 5 cut(s) 204, 613, 3451, 4300, 4501
BspLI GGNNCC 6 cut(s) 496, 1417, 1793, 2431, 5226, 5233
BspMAI CTGCAG 7 cut(s) 1294, 1611, 2661, 2946, 3902, 5745, 5757
BspMI ACCTGC 4 cut(s) 1803, 2126, 2621, 4752
BspPI GGATC 8 cut(s) 542, 1996, 3372, 4288, 4568, 5219, 5232, 5728
BspQI GCTCTTC 1 cut(s) 1629
BspT107I GGYRCC 2 cut(s) 1415, 2429
BspTNI GGTCTC 3 cut(s) 995, 5495, 5911
BsrDI GCAATG 6 cut(s) 132, 1148, 1879, 2650, 4414, 5212
BsrFI RCCGGY 1 cut(s) 953
BsrI ACTGG 5 cut(s) 216, 274, 339, 404, 2254
BssAI RCCGGY 1 cut(s) 953
BssECI CCNNGG 9 cut(s) 297, 925, 1020, 1984, 2206, 2433, 3357, 5228, 5288
BssNI GRCGYC 1 cut(s) 4616
BssT1I CCWWGG 6 cut(s) 297, 925, 1984, 2206, 2433, 3357
Bst2UI CCWGG 7 cut(s) 284, 552, 2387, 2477, 5222, 5229, 5252
BstACI GRCGYC 1 cut(s) 4616
BstAPI GCANNNNNTGC 3 cut(s) 1615, 3067, 5485
BstC8I GCNNGC 7 cut(s) 714, 886, 1050, 1584, 2577, 2595, 5436
BstDSI CCRYGG 1 cut(s) 297
BstENI CCTNNNNNAGG 2 cut(s) 2660, 3428
BstFNI CGCG 2 cut(s) 2623, 5403
BstHHI GCGC 2 cut(s) 282, 5889
BstMAI GTCTC 8 cut(s) 995, 2458, 2794, 4004, 4623, 5495, 5537, 5911
BstNI CCWGG 7 cut(s) 284, 552, 2387, 2477, 5222, 5229, 5252
BstNSI RCATGY 3 cut(s) 476, 2579, 5042
BstSCI CCNGG 9 cut(s) 282, 550, 1019, 1020, 2385, 2475, 5220, 5227, 5250
BstUI CGCG 2 cut(s) 2623, 5403
BstV2I GAAGAC 8 cut(s) 950, 3290, 4161, 4380, 4722, 4794, 5316, 5831
BstX2I RGATCY 7 cut(s) 2730, 2758, 3377, 4293, 5224, 5421, 5720
BstXI CCANNNNNNTGG 1 cut(s) 5665
BstYI RGATCY 7 cut(s) 2730, 2758, 3377, 4293, 5224, 5421, 5720
Bsu36I CCTNAGG 1 cut(s) 5846
BsuI GTATCC 1 cut(s) 1312
BsuRI GGCC 5 cut(s) 338, 366, 2475, 2813, 5234
BtgI CCRYGG 1 cut(s) 297
BtgZI GCGATG 1 cut(s) 5418
BtsIMutI CAGTG 6 cut(s) 853, 1387, 3090, 5052, 5553, 5869
BtuMI TCGCGA 2 cut(s) 2623, 5403
BveI ACCTGC 4 cut(s) 1803, 2126, 2621, 4752
Cac8I GCNNGC 7 cut(s) 714, 886, 1050, 1584, 2577, 2595, 5436
CaiI CAGNNNCTG 6 cut(s) 374, 1067, 1459, 3070, 4192, 5455
CciI TCATGA 5 cut(s) 204, 613, 3451, 4300, 4501
CfoI GCGC 2 cut(s) 282, 5889
Cfr10I RCCGGY 1 cut(s) 953
Cfr13I GGNCC 4 cut(s) 365, 377, 3400, 5232
Cfr9I CCCGGG 1 cut(s) 1020
CseI GACGC 3 cut(s) 39, 5206, 5585
CspCI CAANNNNNGTGG 4 cut(s) 2209, 2244, 4536, 4571
DraI TTTAAA 1 cut(s) 2491
DrdI GACNNNNNNGTC 1 cut(s) 5397
DseDI GACNNNNNNGTC 1 cut(s) 5397
EaeI YGGCCR 1 cut(s) 336
EciI GGCGGA 1 cut(s) 5048
Ecl136II GAGCTC 2 cut(s) 202, 4770
Eco130I CCWWGG 6 cut(s) 297, 925, 1984, 2206, 2433, 3357
Eco147I AGGCCT 2 cut(s) 2475, 2813
Eco24I GRGCYC 4 cut(s) 204, 873, 2941, 4772
Eco31I GGTCTC 3 cut(s) 995, 5495, 5911
Eco32I GATATC 4 cut(s) 990, 1158, 1934, 2035
Eco47I GGWCC 2 cut(s) 377, 3400
Eco53kI GAGCTC 2 cut(s) 202, 4770
Eco81I CCTNAGG 1 cut(s) 5846
Eco88I CYCGRG 3 cut(s) 197, 1020, 5186
EcoICRI GAGCTC 2 cut(s) 202, 4770
EcoNI CCTNNNNNAGG 2 cut(s) 2660, 3428
EcoRI GAATTC 3 cut(s) 2773, 2882, 3079
EcoRII CCWGG 7 cut(s) 282, 550, 2385, 2475, 5220, 5227, 5250
EcoRV GATATC 4 cut(s) 990, 1158, 1934, 2035
EcoT14I CCWWGG 6 cut(s) 297, 925, 1984, 2206, 2433, 3357
EcoT22I ATGCAT 2 cut(s) 448, 3331
EcoT38I GRGCYC 4 cut(s) 204, 873, 2941, 4772
ErhI CCWWGG 6 cut(s) 297, 925, 1984, 2206, 2433, 3357
Esp3I CGTCTC 1 cut(s) 4623
FaqI GGGAC 2 cut(s) 465, 1441
FauNDI CATATG 1 cut(s) 4633
FbaI TGATCA 7 cut(s) 259, 2835, 4845, 5116, 5176, 5446, 5605
FblI GTMKAC 1 cut(s) 5464
FriOI GRGCYC 4 cut(s) 204, 873, 2941, 4772
FspBI CTAG 7 cut(s) 993, 2027, 2598, 2702, 3218, 3461, 4319
GlaI GCGC 2 cut(s) 281, 5888
GsaI CCCAGC 2 cut(s) 833, 2918
GsuI CTGGAG 6 cut(s) 885, 1865, 2141, 2346, 2498, 3971
HaeIII GGCC 5 cut(s) 338, 366, 2475, 2813, 5234
HapII CCGG 2 cut(s) 954, 1021
HgaI GACGC 3 cut(s) 39, 5206, 5585
HhaI GCGC 2 cut(s) 282, 5889
Hin1I GRCGYC 1 cut(s) 4616
Hin6I GCGC 2 cut(s) 280, 5887
HinP1I GCGC 2 cut(s) 280, 5887
HincII GTYRAC 1 cut(s) 4168
HindII GTYRAC 1 cut(s) 4168
HindIII AAGCTT 6 cut(s) 1644, 1853, 2285, 3392, 3770, 4139
HpaII CCGG 2 cut(s) 954, 1021
HphI GGTGA 5 cut(s) 1495, 2008, 3622, 5788, 5801
Hpy166II GTNNAC 7 cut(s) 2129, 2538, 2960, 4168, 5052, 5078, 5465
Hpy8I GTNNAC 7 cut(s) 2129, 2538, 2960, 4168, 5052, 5078, 5465
Hpy99I CGWCG 1 cut(s) 1996
HpyCH4IV ACGT 3 cut(s) 3590, 4616, 5471
HpySE526I ACGT 3 cut(s) 3590, 4616, 5471
Hsp92I GRCGYC 1 cut(s) 4616
HspAI GCGC 2 cut(s) 280, 5887
Ksp22I TGATCA 7 cut(s) 259, 2835, 4845, 5116, 5176, 5446, 5605
LguI GCTCTTC 1 cut(s) 1629
MaeI CTAG 7 cut(s) 993, 2027, 2598, 2702, 3218, 3461, 4319
MaeII ACGT 3 cut(s) 3590, 4616, 5471
MaeIII GTNAC 8 cut(s) 12, 56, 639, 3247, 4778, 4994, 5275, 5698
MfeI CAATTG 3 cut(s) 3501, 4350, 4893
MflI RGATCY 7 cut(s) 2730, 2758, 3377, 4293, 5224, 5421, 5720
MhlI GDGCHC 7 cut(s) 204, 853, 873, 1569, 2941, 3090, 4772
Mph1103I ATGCAT 2 cut(s) 448, 3331
MroXI GAANNNNTTC 6 cut(s) 309, 564, 1345, 4482, 5323, 5631
MslI CAYNNNNRTG 8 cut(s) 441, 2070, 2435, 3636, 3864, 4005, 4056, 4734
MspA1I CMGCKG 2 cut(s) 5204, 5590
MspI CCGG 2 cut(s) 954, 1021
MspR9I CCNGG 9 cut(s) 284, 552, 1021, 1022, 2387, 2477, 5222, 5229, 5252
MunI CAATTG 3 cut(s) 3501, 4350, 4893
Mva1269I GAATGC 3 cut(s) 2116, 2722, 3016
MvaI CCWGG 7 cut(s) 284, 552, 2387, 2477, 5222, 5229, 5252
MvnI CGCG 2 cut(s) 2623, 5403
NciI CCSGG 2 cut(s) 1021, 1022
NcoI CCATGG 1 cut(s) 297
NdeI CATATG 1 cut(s) 4633
NlaIV GGNNCC 6 cut(s) 496, 1417, 1793, 2431, 5226, 5233
NmuCI GTSAC 2 cut(s) 56, 3247
NruI TCGCGA 2 cut(s) 2623, 5403
NsiI ATGCAT 2 cut(s) 448, 3331
NspI RCATGY 3 cut(s) 476, 2579, 5042
OliI CACNNNNGTG 1 cut(s) 2435
PaeI GCATGC 1 cut(s) 2579
PaeR7I CTCGAG 1 cut(s) 5186
PagI TCATGA 5 cut(s) 204, 613, 3451, 4300, 4501
PceI AGGCCT 2 cut(s) 2475, 2813
PciI ACATGT 1 cut(s) 5038
PciSI GCTCTTC 1 cut(s) 1629
PctI GAATGC 3 cut(s) 2116, 2722, 3016
PdmI GAANNNNTTC 6 cut(s) 309, 564, 1345, 4482, 5323, 5631
PflFI GACNNNGTC 1 cut(s) 785
PflMI CCANNNNNTGG 3 cut(s) 374, 4024, 5241
PfoI TCCNGGA 2 cut(s) 550, 5220
PscI ACATGT 1 cut(s) 5038
PshBI ATTAAT 1 cut(s) 4901
Psp124BI GAGCTC 2 cut(s) 204, 4772
Psp1406I AACGTT 1 cut(s) 3590
Psp6I CCWGG 7 cut(s) 282, 550, 2385, 2475, 5220, 5227, 5250
PspFI CCCAGC 2 cut(s) 829, 2914
PspGI CCWGG 7 cut(s) 282, 550, 2385, 2475, 5220, 5227, 5250
PspN4I GGNNCC 6 cut(s) 496, 1417, 1793, 2431, 5226, 5233
PspPI GGNCC 4 cut(s) 365, 377, 3400, 5232
PspXI VCTCGAGB 1 cut(s) 5186
PstI CTGCAG 7 cut(s) 1294, 1611, 2661, 2946, 3902, 5745, 5757
PstNI CAGNNNCTG 6 cut(s) 374, 1067, 1459, 3070, 4192, 5455
PsuI RGATCY 7 cut(s) 2730, 2758, 3377, 4293, 5224, 5421, 5720
PsyI GACNNNGTC 1 cut(s) 785
PvuII CAGCTG 2 cut(s) 5204, 5590
RruI TCGCGA 2 cut(s) 2623, 5403
RseI CAYNNNNRTG 8 cut(s) 441, 2070, 2435, 3636, 3864, 4005, 4056, 4734
SacI GAGCTC 2 cut(s) 204, 4772
SapI GCTCTTC 1 cut(s) 1629
Sau96I GGNCC 4 cut(s) 365, 377, 3400, 5232
SbfI CCTGCAGG 1 cut(s) 2661
ScaI AGTACT 1 cut(s) 2991
ScrFI CCNGG 9 cut(s) 284, 552, 1021, 1022, 2387, 2477, 5222, 5229, 5252
SdaI CCTGCAGG 1 cut(s) 2661
SduI GDGCHC 7 cut(s) 204, 853, 873, 1569, 2941, 3090, 4772
Sfr274I CTCGAG 1 cut(s) 5186
SinI GGWCC 2 cut(s) 377, 3400
SlaI CTCGAG 1 cut(s) 5186
SmaI CCCGGG 1 cut(s) 1022
SmiMI CAYNNNNRTG 8 cut(s) 441, 2070, 2435, 3636, 3864, 4005, 4056, 4734
SphI GCATGC 1 cut(s) 2579
Sse8387I CCTGCAGG 1 cut(s) 2661
SseBI AGGCCT 2 cut(s) 2475, 2813
SsiI CCGC 6 cut(s) 581, 1367, 1462, 1573, 5033, 5111
SspI AATATT 2 cut(s) 1809, 5386
SspMI CTAG 7 cut(s) 993, 2027, 2598, 2702, 3218, 3461, 4319
SstI GAGCTC 2 cut(s) 204, 4772
StuI AGGCCT 2 cut(s) 2475, 2813
StyD4I CCNGG 9 cut(s) 282, 550, 1019, 1020, 2385, 2475, 5220, 5227, 5250
StyI CCWWGG 6 cut(s) 297, 925, 1984, 2206, 2433, 3357
TaiI ACGT 3 cut(s) 3593, 4619, 5474
TaqII GACCGA 1 cut(s) 2598
TatI WGTACW 7 cut(s) 180, 966, 1134, 1267, 2989, 2995, 5049
TscAI CASTG 6 cut(s) 853, 1387, 3090, 5059, 5553, 5869
TseFI GTSAC 2 cut(s) 56, 3247
Tsp45I GTSAC 2 cut(s) 56, 3247
TspGWI ACGGA 4 cut(s) 4130, 4326, 4463, 5815
TspMI CCCGGG 1 cut(s) 1020
TspRI CASTG 6 cut(s) 853, 1387, 3090, 5059, 5553, 5869
Tth111I GACNNNGTC 1 cut(s) 785
Van91I CCANNNNNTGG 3 cut(s) 374, 4024, 5241
VpaK11BI GGWCC 2 cut(s) 377, 3400
VspI ATTAAT 1 cut(s) 4901
XagI CCTNNNNNAGG 2 cut(s) 2660, 3428
XbaI TCTAGA 2 cut(s) 3217, 4318
XceI RCATGY 3 cut(s) 476, 2579, 5042
XhoI CTCGAG 1 cut(s) 5186
XmaI CCCGGG 1 cut(s) 1020
XmiI GTMKAC 1 cut(s) 5464
XmnI GAANNNNTTC 6 cut(s) 309, 564, 1345, 4482, 5323, 5631
XspI CTAG 7 cut(s) 993, 2027, 2598, 2702, 3218, 3461, 4319
ZraI GACGTC 1 cut(s) 4617
ZrmI AGTACT 1 cut(s) 2991
Zsp2I ATGCAT 2 cut(s) 448, 3331
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.