Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0017041

Physical Location & Seq

Genomic Coordinates Forward (+)

9519741 .. 9521094

Gene Structure 1354 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G26040.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1329 bp

ATGAGAGTTGATGTTGTCTCCAGAGATATCATCAAACCATCATCTCCAACTCCAAACCACTTAAAGAAGTTTAAACTCTCTCTTTTAGAACAGCTCGGTCCAACGATCTTTGGTCCTATGGTTTTCTTCTATTCAGCTAACAACAGCATCAAACCAACTGAGCAATTGCAGATGCTGAAGAAGTCGTTATCCGAAACTTTAACTCATTTCTACCCTCTCGCTGGACGGCTCAAAGGCAACATAAGTATCGATTGTAATGACTCAGGCGCTGATTTCCTCGAAGCACGAGTCAATTCACCGCTTTCGAATCTCCTACTAGAGCCTTCTTCTGACAGCTTGCAACAACTGATTCCTACATCTGTTGATTCCATAGAGACACGAACCAGACTGCTTCTTGCTCAAGCGAGTTTCTTTGAATGTGGAAGCATGTCTATAGGAGTTTGTATCTCTCATAAACTCGCTGACGCAACTTCTATCGGTTTATTCATGAAGAGCTGGGCTGCAATCTCGTCCCGAGGGTCGATCAAAACCATTGGAGCTCCGGTTTTCGACACGGTTAAGATCTTCCCACCTGGAAACTTCTCTGAGACTTCCCCTGCACCAGTGGTTGAGCCAGAGATCATGATGAATCAGACTCTTTCGAAGAGATTCATATTCGATTCTTCGAGTATTCAAGCTCTGCAAGCGAAAGCTTCAAGCTTTGAAGTGAATCAACCAACAAGAGTCGAAGCTGTTTCAGCTCTTATATGGAAATCTGCAATGAAAGCTACAAGAACAGTTTCAGGAACATCGAAACCGTCAATTCTGGCAAACTCCGTGAGTCTACGCTCACGAGTCTCTCCACCATTTACAAAGAACTCAATAGGGAATCTAGTGAGCTACTTTGCAGCAAAAGCAGAGGAAGGAATAAACCAAACAAAGCTTCAAACTTTGGTTTCGAAAATACGAAAAGCGAAACAGAGGTTTCGAGATATCCATATACCAAAGCTTGTAGGAAACCCAAATGCCACAGAGATCATTTGTAGCTACCAGAAAGAAGCAGGAGATATGATTGCAAGTGGAGATTTCGATTTCTACATATTCTCAAGTGCTTGTCGATTCGGTTTATACGAAACCGATTTCGGTTGGGGAAAACCGGTTTGGGTCGGGTTTCCTTCGGTTAGACAGAAGAACATCGTGACGCTTCTCGACACGAAAGAAGCTGGTGGAATTGAAGCTTGGGTGAATCTGAATGAACAAGAGATGAATCTTTTTGAACAAGATAGAGAATTGCTCCAATTCGCTTCTCTGAATCCTAGTGTGATCCAACCTTTTCTTCATGTTCTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006629 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008202 GO:0009314 GO:0009416 GO:0009628 GO:0009642 GO:0009646 GO:0009719 GO:0009725 GO:0009741 GO:0009742 GO:0009755 GO:0009889 GO:0009962 GO:0009987 GO:0010033 GO:0010268 GO:0010422 GO:0010817 GO:0014070 GO:0016128 GO:0016131 GO:0019216 GO:0019218 GO:0019222 GO:0023052 GO:0031323 GO:0031326 GO:0032350 GO:0032870 GO:0033993 GO:0042221 GO:0042445 GO:0042592 GO:0043401 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046885 GO:0046890 GO:0048545 GO:0048878 GO:0050789 GO:0050794 GO:0050810 GO:0050896 GO:0051716 GO:0055088 GO:0065007 GO:0065008 GO:0070887 GO:0071310 GO:0071367 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071704 GO:0080090 GO:0090030 GO:1901360 GO:1901615 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko00940 ko00941 ko00945 ko01100 ko01110 map00940 map00941 map00945 map01100 map01110

Pfam Domains

Protein Families

Transferase

Protein Analysis

442

Amino Acids

48.7

Weight (kDa)

8.93

Isoelectric Point (pI)

43.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Transferase	PF02458	1 - 424	4.1e-98	Transferase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0017041)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G26040
fragaria_vesca	FvH4_3g15920
malus_domestica	MD05G1218200.v1.1 MD16G1109400.v1.1
rosa_chinensis	RchiOBHm_Chr5g0026761
rosa_laevigata	RLG00000032959
rosa_multiflora	Rmu_sc0001493.1_g000016 Rmu_ssc0000172.1_g000028 Rmu_ssc0000172.1_g000030
rosa_roxburghii	Rroxscaffold_1G00052730
rosa_rugosa	Rorug05G0095400
rosa_samantha	Rh5DG187500
rosa_wichuraiana	Rw5G017120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	823
AciI	CCGC	1 cut(s)	299
AclWI	GGATC	1 cut(s)	1297
AcuI	CTGAAG	1 cut(s)	197
AfiI	CCNNNNNNNGG	1 cut(s)	221
AgeI	ACCGGT	1 cut(s)	1135
AgsI	TTSAA	7 cut(s)	416, 674, 696, 704, 926, 1214, 1256
AjnI	CCWGG	1 cut(s)	571
AjuI	GAANNNNNNNTTGG	7 cut(s)	906, 938, 1123, 1155, 1201, 1233, 1299
Alw21I	GWGCWC	1 cut(s)	541
Alw26I	GTCTC	4 cut(s)	22, 368, 581, 841
AlwI	GGATC	1 cut(s)	1297
AlwNI	CAGNNNCTG	2 cut(s)	175, 269
Ama87I	CYCGRG	1 cut(s)	513
ApeKI	GCWGC	2 cut(s)	500, 887
ArsI	GACNNNNNNTTYG	2 cut(s)	273, 305
AsiGI	ACCGGT	1 cut(s)	1135
Asp700I	GAANNNNTTC	2 cut(s)	647, 778
AspLEI	GCGC	1 cut(s)	269
AspS9I	GGNCC	2 cut(s)	98, 113
AsuHPI	GGTGA	2 cut(s)	288, 1234
AsuII	TTCGAA	3 cut(s)	305, 641, 938
AvaI	CYCGRG	1 cut(s)	513
AvaII	GGWCC	2 cut(s)	98, 113
BaeI	ACNNNNGTAYC	2 cut(s)	229, 262
BanII	GRGCYC	1 cut(s)	541
BauI	CACGAG	2 cut(s)	285, 831
Bbv12I	GWGCWC	1 cut(s)	541
BbvI	GCAGC	2 cut(s)	487, 899
BccI	CCATC	1 cut(s)	46
BceAI	ACGGC	1 cut(s)	242
BciT130I	CCWGG	1 cut(s)	573
BcoDI	GTCTC	4 cut(s)	22, 368, 581, 841
BfaI	CTAG	3 cut(s)	317, 872, 1296
BfmI	CTRYAG	1 cut(s)	432
BfoI	RGCGCY	1 cut(s)	270
BglII	AGATCT	1 cut(s)	561
BisI	GCNGC	2 cut(s)	501, 888
BlsI	GCNGC	2 cut(s)	502, 889
Bme1390I	CCNGG	1 cut(s)	573
Bme18I	GGWCC	2 cut(s)	98, 113
BmeT110I	CYCGRG	1 cut(s)	513
BmgT120I	GGNCC	2 cut(s)	98, 113
BmrFI	CCNGG	1 cut(s)	573
BmsI	GCATC	2 cut(s)	156, 162
BplI	GAGNNNNNCTC	2 cut(s)	1257, 1289
BpmI	CTGGAG	1 cut(s)	4
Bpu14I	TTCGAA	3 cut(s)	305, 641, 938
BpuEI	CTTGAG	2 cut(s)	384, 1069
Bsa29I	ATCGAT	1 cut(s)	249
BsaJI	CCNNGG	1 cut(s)	514
BsaWI	WCCGGW	2 cut(s)	541, 1135
BsaXI	ACNNNNNCTCC	2 cut(s)	528, 558
Bsc4I	CCNNNNNNNGG	1 cut(s)	221
Bse118I	RCCGGY	1 cut(s)	1135
Bse1I	ACTGG	1 cut(s)	602
Bse3DI	GCAATG	1 cut(s)	765
BseBI	CCWGG	1 cut(s)	573
BseCI	ATCGAT	1 cut(s)	249
BseDI	CCNNGG	1 cut(s)	514
BseLI	CCNNNNNNNGG	1 cut(s)	221
BseMI	GCAATG	1 cut(s)	765
BseMII	CTCAG	3 cut(s)	150, 276, 576
BseNI	ACTGG	1 cut(s)	602
BseXI	GCAGC	2 cut(s)	487, 899
BseYI	CCCAGC	1 cut(s)	495
BsgI	GTGCAG	1 cut(s)	582
BshTI	ACCGGT	1 cut(s)	1135
BshVI	ATCGAT	1 cut(s)	249
BsiHKAI	GWGCWC	1 cut(s)	541
BsiHKCI	CYCGRG	1 cut(s)	513
BsiSI	CCGG	2 cut(s)	542, 1136
BslFI	GGGAC	1 cut(s)	496
BslI	CCNNNNNNNGG	1 cut(s)	221
BsmAI	GTCTC	4 cut(s)	22, 368, 581, 841
BsmFI	GGGAC	1 cut(s)	496
BsoBI	CYCGRG	1 cut(s)	513
Bsp119I	TTCGAA	3 cut(s)	305, 641, 938
Bsp1286I	GDGCHC	1 cut(s)	541
Bsp143I	GATC	6 cut(s)	105, 522, 561, 618, 1014, 1302
BspACI	CCGC	1 cut(s)	299
BspCNI	CTCAG	3 cut(s)	151, 275, 577
BspDI	ATCGAT	1 cut(s)	249
BspHI	TCATGA	2 cut(s)	486, 621
BspPI	GGATC	1 cut(s)	1297
BspQI	GCTCTTC	1 cut(s)	485
BspT104I	TTCGAA	3 cut(s)	305, 641, 938
BsrDI	GCAATG	1 cut(s)	765
BsrFI	RCCGGY	1 cut(s)	1135
BsrI	ACTGG	1 cut(s)	602
BssAI	RCCGGY	1 cut(s)	1135
BssECI	CCNNGG	1 cut(s)	514
BssMI	GATC	6 cut(s)	105, 522, 561, 618, 1014, 1302
BssSI	CACGAG	2 cut(s)	285, 831
Bst2BI	CACGAG	2 cut(s)	285, 831
Bst2UI	CCWGG	1 cut(s)	573
Bst4CI	ACNGT	3 cut(s)	556, 778, 798
Bst6I	CTCTTC	2 cut(s)	485, 638
BstBI	TTCGAA	3 cut(s)	305, 641, 938
BstC8I	GCNNGC	2 cut(s)	338, 684
BstDEI	CTNAG	3 cut(s)	159, 262, 585
BstH2I	RGCGCY	1 cut(s)	270
BstHHI	GCGC	1 cut(s)	269
BstKTI	GATC	6 cut(s)	108, 525, 564, 621, 1017, 1305
BstMAI	GTCTC	4 cut(s)	22, 368, 581, 841
BstMBI	GATC	6 cut(s)	105, 522, 561, 618, 1014, 1302
BstMWI	GCNNNNNNNGC	4 cut(s)	683, 737, 764, 893
BstNI	CCWGG	1 cut(s)	573
BstNSI	RCATGY	1 cut(s)	430
BstSCI	CCNGG	1 cut(s)	571
BstSFI	CTRYAG	1 cut(s)	432
BstV1I	GCAGC	2 cut(s)	487, 899
BstX2I	RGATCY	1 cut(s)	561
BstYI	RGATCY	1 cut(s)	561
Bsu15I	ATCGAT	1 cut(s)	249
BsuTUI	ATCGAT	1 cut(s)	249
BtsIMutI	CAGTG	1 cut(s)	609
Cac8I	GCNNGC	2 cut(s)	338, 684
CaiI	CAGNNNCTG	2 cut(s)	175, 269
CciI	TCATGA	2 cut(s)	486, 621
CfoI	GCGC	1 cut(s)	269
Cfr10I	RCCGGY	1 cut(s)	1135
Cfr13I	GGNCC	2 cut(s)	98, 113
ClaI	ATCGAT	1 cut(s)	249
CseI	GACGC	2 cut(s)	473, 1189
CspAI	ACCGGT	1 cut(s)	1135
CviAII	CATG	4 cut(s)	427, 487, 622, 1319
DdeI	CTNAG	3 cut(s)	159, 262, 585
DpnI	GATC	6 cut(s)	107, 524, 563, 620, 1016, 1304
DpnII	GATC	6 cut(s)	105, 522, 561, 618, 1014, 1302
DraI	TTTAAA	1 cut(s)	73
Eam1104I	CTCTTC	2 cut(s)	485, 638
EarI	CTCTTC	2 cut(s)	485, 638
Ecl136II	GAGCTC	1 cut(s)	539
Eco24I	GRGCYC	1 cut(s)	541
Eco32I	GATATC	2 cut(s)	28, 973
Eco47I	GGWCC	2 cut(s)	98, 113
Eco53kI	GAGCTC	1 cut(s)	539
Eco57I	CTGAAG	1 cut(s)	197
Eco88I	CYCGRG	1 cut(s)	513
EcoICRI	GAGCTC	1 cut(s)	539
EcoRII	CCWGG	1 cut(s)	571
EcoRV	GATATC	2 cut(s)	28, 973
EcoT38I	GRGCYC	1 cut(s)	541
FaeI	CATG	4 cut(s)	430, 490, 625, 1322
FaqI	GGGAC	1 cut(s)	496
FatI	CATG	4 cut(s)	426, 486, 621, 1318
FblI	GTMKAC	1 cut(s)	823
Fnu4HI	GCNGC	2 cut(s)	501, 888
FriOI	GRGCYC	1 cut(s)	541
Fsp4HI	GCNGC	2 cut(s)	501, 888
FspBI	CTAG	3 cut(s)	317, 872, 1296
GlaI	GCGC	1 cut(s)	268
GluI	GCNGC	2 cut(s)	501, 888
GsaI	CCCAGC	1 cut(s)	499
GsuI	CTGGAG	1 cut(s)	4
HaeII	RGCGCY	1 cut(s)	270
HapII	CCGG	2 cut(s)	542, 1136
HgaI	GACGC	2 cut(s)	473, 1189
HhaI	GCGC	1 cut(s)	269
Hin1II	CATG	4 cut(s)	430, 490, 625, 1322
Hin6I	GCGC	1 cut(s)	267
HinP1I	GCGC	1 cut(s)	267
HindIII	AAGCTT	5 cut(s)	690, 697, 920, 986, 1215
HpaII	CCGG	2 cut(s)	542, 1136
HphI	GGTGA	2 cut(s)	288, 1234
Hpy166II	GTNNAC	1 cut(s)	824
Hpy188I	TCNGA	7 cut(s)	193, 331, 586, 633, 1230, 1290, 1328
Hpy188III	TCNNGA	9 cut(s)	21, 487, 513, 622, 783, 831, 968, 1177, 1187
Hpy8I	GTNNAC	1 cut(s)	824
HpyAV	CCTTC	3 cut(s)	333, 896, 1164
HpyCH4III	ACNGT	3 cut(s)	556, 778, 798
HpyCH4V	TGCA	8 cut(s)	169, 340, 503, 599, 682, 758, 887, 1055
HpyF10VI	GCNNNNNNNGC	4 cut(s)	683, 737, 764, 893
HpyF3I	CTNAG	3 cut(s)	159, 262, 585
Hsp92II	CATG	4 cut(s)	430, 490, 625, 1322
HspAI	GCGC	1 cut(s)	267
Kzo9I	GATC	6 cut(s)	105, 522, 561, 618, 1014, 1302
LguI	GCTCTTC	1 cut(s)	485
LmnI	GCTCC	3 cut(s)	536, 544, 1278
Lsp1109I	GCAGC	2 cut(s)	487, 899
LweI	GCATC	2 cut(s)	156, 162
MaeI	CTAG	3 cut(s)	317, 872, 1296
MaeIII	GTNAC	1 cut(s)	1177
MalI	GATC	6 cut(s)	107, 524, 563, 620, 1016, 1304
MboI	GATC	6 cut(s)	105, 522, 561, 618, 1014, 1302
MboII	GAAGA	9 cut(s)	118, 190, 318, 502, 556, 654, 655, 1180, 1307
MfeI	CAATTG	1 cut(s)	164
MflI	RGATCY	1 cut(s)	561
MhlI	GDGCHC	1 cut(s)	541
MluCI	AATT	6 cut(s)	164, 292, 801, 1209, 1268, 1277
MlyI	GAGTC	6 cut(s)	254, 297, 628, 732, 829, 843
MmeI	TCCRAC	2 cut(s)	71, 125
MnlI	CCTC	5 cut(s)	225, 287, 509, 892, 954
MroXI	GAANNNNTTC	2 cut(s)	647, 778
MseI	TTAA	4 cut(s)	62, 72, 200, 558
MspI	CCGG	2 cut(s)	542, 1136
MspR9I	CCNGG	1 cut(s)	573
MssI	GTTTAAAC	1 cut(s)	73
MunI	CAATTG	1 cut(s)	164
MvaI	CCWGG	1 cut(s)	573
MwoI	GCNNNNNNNGC	4 cut(s)	683, 737, 764, 893
NdeII	GATC	6 cut(s)	105, 522, 561, 618, 1014, 1302
NlaIII	CATG	4 cut(s)	430, 490, 625, 1322
NmuCI	GTSAC	1 cut(s)	1177
NspI	RCATGY	1 cut(s)	430
NspV	TTCGAA	3 cut(s)	305, 641, 938
PagI	TCATGA	2 cut(s)	486, 621
PciSI	GCTCTTC	1 cut(s)	485
PcsI	WCGNNNNNNNCGW	1 cut(s)	1107
PdmI	GAANNNNTTC	2 cut(s)	647, 778
PinAI	ACCGGT	1 cut(s)	1135
PkrI	GCNGC	2 cut(s)	502, 889
PleI	GAGTC	6 cut(s)	254, 296, 628, 731, 828, 842
PmeI	GTTTAAAC	1 cut(s)	73
PpsI	GAGTC	6 cut(s)	254, 296, 628, 731, 828, 842
Psp124BI	GAGCTC	1 cut(s)	541
Psp6I	CCWGG	1 cut(s)	571
PspFI	CCCAGC	1 cut(s)	495
PspGI	CCWGG	1 cut(s)	571
PspPI	GGNCC	2 cut(s)	98, 113
PstNI	CAGNNNCTG	2 cut(s)	175, 269
PsuI	RGATCY	1 cut(s)	561
SacI	GAGCTC	1 cut(s)	541
SapI	GCTCTTC	1 cut(s)	485
SaqAI	TTAA	4 cut(s)	62, 72, 200, 558
SatI	GCNGC	2 cut(s)	501, 888
Sau3AI	GATC	6 cut(s)	105, 522, 561, 618, 1014, 1302
Sau96I	GGNCC	2 cut(s)	98, 113
SchI	GAGTC	6 cut(s)	254, 297, 628, 732, 829, 843
ScrFI	CCNGG	1 cut(s)	573
SduI	GDGCHC	1 cut(s)	541
SfaNI	GCATC	2 cut(s)	156, 162
SfcI	CTRYAG	1 cut(s)	432
SfuI	TTCGAA	3 cut(s)	305, 641, 938
SinI	GGWCC	2 cut(s)	98, 113
SmlI	CTYRAG	2 cut(s)	399, 1084
SmoI	CTYRAG	2 cut(s)	399, 1084
Sse9I	AATT	6 cut(s)	164, 292, 801, 1209, 1268, 1277
SsiI	CCGC	1 cut(s)	299
SspMI	CTAG	3 cut(s)	317, 872, 1296
SstI	GAGCTC	1 cut(s)	541
StyD4I	CCNGG	1 cut(s)	571
TaaI	ACNGT	3 cut(s)	556, 778, 798
TaqII	GACCGA	1 cut(s)	86
TasI	AATT	6 cut(s)	164, 292, 801, 1209, 1268, 1277
Tru1I	TTAA	4 cut(s)	62, 72, 200, 558
Tru9I	TTAA	4 cut(s)	62, 72, 200, 558
TscAI	CASTG	1 cut(s)	609
TseFI	GTSAC	1 cut(s)	1177
TseI	GCWGC	2 cut(s)	500, 887
Tsp45I	GTSAC	1 cut(s)	1177
TspDTI	ATGAA	8 cut(s)	475, 503, 640, 641, 776, 1248, 1259, 1307
TspGWI	ACGGA	1 cut(s)	805
TspRI	CASTG	1 cut(s)	609
VpaK11BI	GGWCC	2 cut(s)	98, 113
XceI	RCATGY	1 cut(s)	430
XmiI	GTMKAC	1 cut(s)	823
XmnI	GAANNNNTTC	2 cut(s)	647, 778
XspI	CTAG	3 cut(s)	317, 872, 1296

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.