Rorug05G0095400

BAHD acyltransferase At5g47980-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
8486564 .. 8492335
5772 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0095400.1

Sequence Viewer

Length: 2508 bp
ATGAGTCAGCCTTGGAACTTTTCATCTTCTGGTTCTACTAAAACTCAGATGGTCGGTAGAGGAGCATGGGGGATTTTATCTGGATCTGATGCCCATCATACCTCAAGTGATGCTACCCTTTTCTCAAGCTCATTACCCGTACTTCCTCATCCAAAGTTGAACTTGAATGATGTGGAAAATGGCCGCCAATCTATTGATGATCTCTCGTCTGGCTTAAAGAAACTCCATCAAAATTTGGAGGGTAATGATCCAATTGATGATATTGAAACTCATGCAATTGGTAGCTTGCTTCCTGGGGACGAGGAGGAGCTTTTAGCTGGCATAGCGGATGATCTTGACCTCAGTGGGTTGCCTGGGTCCCTGGAAGACTTGGAGGAGTATGATCTCTTTGGTAGTGGAGGTGGCATGGAATTGGAAAGTGATCCACAGGATAGTCTGAGAATTGGCATTTCAAAAGTAAATTTATCTGATGGTTCTATGGGGAATGGGATGCTTAATTCTGCCCTTTCAAACGGTGTGGGAACTGTTGCCGGAGAACATCCATATGGCGAGCATCCCTCCAGAACACTATTTGTGCGAAATATCAACAGTAATGTTGAGGATTCAGAACTAAGAGCACTTTTTGAGCAATATGGCGATATTAGAACACTGTACACTGCATGTAAACATAGGGGCTTTGTGATGATATCTTATTATGATATTCGTGCTGCTCGAACTGCTATGCGTTTGTTACAAAACAAGCCACTGCGACGGAGGAAACTTGATATTCATTTTTCAATACCGAAGGATAACCCATCAGAGAAGGACGTTAATCAAGGGACCTTGGTAGTTTTTAATTTGGATCCATCAGTTTCAAATGAAGACCTCCTTCAAATATTTGGGGCCTATGGTGAGGTCAAAGAGATAAGGGAAACGCCGCATAAGAGACACCATAAATTTATTGAGTACTATGATGTCAGAGCTGCAGAAGCAGCACTTAAGTCATTAAATAGGAGTGACATAGCTGGTAAACGCATAAAGTTGGAACCCAGTCGCCCTGGAGGAGCTCGTCGAAACTTGATGTTGCAACTGAATCAAGACCCTGAACAAGATGAATCTCGGAATTATCTACATCCAGTGGGTTCACCCGTAACCAACTCTCCACCAGGTAGCTGGGTGCAGTTCAACAGCCCCACTGAACATAGTCCTATGTACAGTATTAGTAAATCTCCTGGTTTCAGGACCACGAGTCCGACAAACAGCAACTATTTGCCTGGACTAGCGTCAATTCTGCATCCCCAAGTATCAAACACTCTGAAAGTGGCACCTATTGGTAGCCCAGGAAGGGGGGGTATTTCAAATCAGATCTTTACAAATACAAACTCAGCACATGGATCTGCATTTCAACAATCACATTCAGTTCCAGAGCCACAGTTAAGCCATTTCCATGGCGCATTGCACTCCTCTGGACCTTCAACTTCAAGTGGATCATCAGCTGTGGAAACATTATCAGGTCCACAATTTCTTTGGGGAAGTCCAACTGTTGAAAAAACCAATTCTTCTGTTTGGCCTCAGAAAGCAGTGGGACATCAACTTGCATCGAATGGGAAGGGGCATACCCATCCATTCTCAGGTCCTCATAGCTCTTTCCTCAGCTCTTCCCCTCACCATCATCATGTTGGATCTGCTCCATCTGGCATTCCATTTGACAGGCACTTTAGTTATGTCCCAGAGTCGGCGGAAACTTCATATTTGAGTCCTGTTGCCTATGGAGGCATGGGATTAGGCCCCAGTGGTGGAAATTTTAGGATTAATAGGGGCGCTCATACCGCTACAAATGTTGGCTTTTCCATACCAGGAAGTGTGCCTGAAAGTAGTTCCTCCAGTTTTAAAATGATGTCCTCACCGAAGCTTAGCCCCGTGTTTTTAGGTAATGGGCCATACATGGGACTGCCTCCTACAAGCATTGATGGTTTGACTGAGCGTGGGAGGAGCAGACGAGTTGAGAATAATGGGAACCAGATTGATAGCAAGAAACAGTTTCAACTTGATTTGGATAAGATTGTCAGCGGGGAAGATACCCGAACAACATTAATGATCAAAAATATCCCAAATAAGTACACCTCAAAAATGCTACTTGCTGCAATAGATGAAAATCACAAGGGTACTTATGATTTTCTCTATCTTCCAATTGATTTTAAGAATAAGTGCAACGTGGGCTATGCATTTATCAATATGCTGTCTCCTTCACACATCATCCCATTTTATGAGGCATTCAATGGAAAGAAATGGGAGAAGTTTAATAGTGAGAAAGTTGCTTCTTTGGCTTATGGGCGAATCCAGGGGAAGGCAGCTCTTGTGACCCATTTTCAAAATTCAAGCCTAATGAATGAAGACAAACGCTGTCGCCCGATTCTCTTTATCTCAGAGAGTTCAGAGGCTGGTGATCAGGTTTCTCAGCCAAAGGAGTCGGACATTGGTGCATCAGGAAGCCCGGAGTCTGGCGGGTTTGATGAGAACAAAAGTTGA

Protein Analysis

835

Amino Acids

90.65

Weight (kDa)

6.27

Isoelectric Point (pI)

49.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 190 - 254 2e-09 RNA recognition motif
RRM_5 PF13893 271 - 347 9.7e-07 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
RRM_1 PF00076 275 - 340 2.8e-11 RNA recognition motif
RRM_2 PF04059 688 - 784 3.3e-54 RNA recognition motif 2
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000200)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G24420 AT1G24420
fragaria_vesca FvH4_3g15900 FvH4_3g15901 FvH4_3g15902 FvH4_3g15903 FvH4_3g15910 FvH4_3g16350 FvH4_3g16950 FvH4_3g17000 FvH4_3g17010 FvH4_3g35170 FvH4_4g17550
malus_domestica MD02G1273000.v1.1 MD03G1110800.v1.1 MD05G1218500.v1.1 MD05G1218600.v1.1 MD05G1218800.v1.1 MD05G1218900.v1.1 MD05G1219000.v1.1 MD09G1267700.v1.1 MD10G1199600.v1.1 MD10G1199700.v1.1 MD10G1200000.v1.1 MD10G1200100.v1.1 MD10G1200300.v1.1 MD10G1201000.v1.1 MD11G1116900.v1.1 MD11G1117000.v1.1 MD11G1275900.v1.1 MD13G1109500.v1.1 MD14G1011700.v1.1 MD14G1015400.v1.1 MD14G1015500.v1.1
prunus_persica Prupe.4G140700_v2.0.a1 Prupe.4G140800_v2.0.a1 Prupe.4G141500_v2.0.a1
pyrus_communis pycom02g23390 pycom05g19930 pycom05g19940 pycom05g19970 pycom05g19980 pycom05g19990 pycom05g20000 pycom05g20020 pycom10g17190 pycom10g17200 pycom10g17210 pycom10g17220 pycom10g24650 pycom11g24430 pycom14g01050 pycom14g01330 pycom16g06450
rosa_chinensis RchiOBHm_Chr4g0391831 RchiOBHm_Chr4g0391841 RchiOBHm_Chr4g0407921 RchiOBHm_Chr4g0408021 RchiOBHm_Chr4g0412981 RchiOBHm_Chr4g0415601 RchiOBHm_Chr4g0415621 RchiOBHm_Chr4g0421461 RchiOBHm_Chr4g0431781 RchiOBHm_Chr5g0026651 RchiOBHm_Chr5g0026721 RchiOBHm_Chr5g0026731 RchiOBHm_Chr5g0026741 RchiOBHm_Chr5g0026751 RchiOBHm_Chr5g0026821 RchiOBHm_Chr5g0028341
rosa_laevigata RLG00000006890 RLG00000007680 RLG00000007682 RLG00000008056 RLG00000008057 RLG00000008058 RLG00000008060 RLG00000008681 RLG00000032943 RLG00000032951 RLG00000032955 RLG00000032956 RLG00000032957 RLG00000032958 RLG00000032961 RLG00000033083 RLG00000033084
rosa_multiflora Rmu_co7991326.1_g000001 Rmu_co8439139.1_g000001 Rmu_co8448401.1_g000001 Rmu_sc0001194.1_g000015 Rmu_sc0001962.1_g000015 Rmu_sc0002073.1_g000012 Rmu_sc0004490.1_g000006 Rmu_sc0004599.1_g000009 Rmu_sc0004805.1_g000044 Rmu_sc0008526.1_g000001 Rmu_ssc0000172.1_g000021 Rmu_ssc0000172.1_g000031 Rmu_ssc0000172.1_g000032
rosa_roxburghii Rroxscaffold_1G00051360 Rroxscaffold_1G00051390 Rroxscaffold_1G00052710 Rroxscaffold_1G00052750 Rroxscaffold_1G00052810 Rroxscaffold_1G00052820 Rroxscaffold_4G00321060 Rroxscaffold_4G00321070 Rroxscaffold_5G00352550 Rroxscaffold_5G00359410
rosa_rugosa Rorug01G0079700 Rorug01G0080700 Rorug04G0083200 Rorug04G0083400 Rorug04G0135400 Rorug04G0135500.1 Rorug04G0135900 Rorug04G0171400 Rorug04G0252300 Rorug05G0095200 Rorug05G0095300 Rorug05G0095400 Rorug05G0402400
rosa_samantha Rh1DG103500 Rh4AG176900 Rh4AG196400 Rh4AG232100 Rh4AG308800 Rh4DG141600 Rh4DG194000 Rh4DG194100 Rh4DG194300 Rh4DG230600 Rh5AG177800 Rh5AG188100 Rh5AG188800 Rh5AG188900 Rh5AG199400 Rh5DG187300 Rh5DG187400 Rh5DG188000 Rh5DG199900
rosa_wichuraiana Rw0G018630 Rw1G007730 Rw4G012100 Rw4G016700 Rw4G020190 Rw5G016100 Rw5G017090 Rw5G017100 Rw5G017110 Rw5G018170 Rw5G018180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1303
AciI CCGC 7 cut(s) 184, 326, 917, 1718, 1809, 2049, 2484
AclWI GGATC 8 cut(s) 91, 242, 416, 836, 849, 1381, 1474, 1669
AcoI YGGCCR 1 cut(s) 181
AcsI RAATTY 5 cut(s) 232, 460, 935, 1780, 2353
AfaI GTAC 6 cut(s) 141, 653, 947, 1193, 2099, 2146
AfiI CCNNNNNNNGG 8 cut(s) 1324, 1325, 1610, 1714, 1775, 1925, 2326, 2480
AflII CTTAAG 1 cut(s) 977
AhdI GACNNNNNGTC 1 cut(s) 1227
Alw21I GWGCWC 2 cut(s) 619, 1048
Alw26I GTCTC 2 cut(s) 919, 2226
AlwI GGATC 8 cut(s) 91, 242, 416, 836, 849, 1381, 1474, 1669
AlwNI CAGNNNCTG 1 cut(s) 2420
AoxI GGCC 5 cut(s) 181, 882, 1547, 1765, 1916
ApeKI GCWGC 5 cut(s) 707, 962, 971, 2120, 2330
ApoI RAATTY 5 cut(s) 232, 460, 935, 1780, 2353
AseI ATTAAT 2 cut(s) 1791, 2072
AspLEI GCGC 2 cut(s) 1433, 1802
AspS9I GGNCC 9 cut(s) 357, 819, 882, 1221, 1448, 1493, 1613, 1766, 1916
AsuC2I CCSGG 1 cut(s) 2474
AsuHPI GGTGA 5 cut(s) 902, 1116, 1637, 1875, 2435
AvaII GGWCC 6 cut(s) 357, 819, 1221, 1448, 1493, 1613
BamHI GGATCC 1 cut(s) 841
BanI GGYRCC 1 cut(s) 1303
BanII GRGCYC 1 cut(s) 1048
BauI CACGAG 1 cut(s) 1225
BbsI GAAGAC 3 cut(s) 372, 867, 2379
Bbv12I GWGCWC 2 cut(s) 619, 1048
BbvCI CCTCAGC 1 cut(s) 1631
BbvI GCAGC 5 cut(s) 694, 949, 983, 2107, 2342
BclI TGATCA 2 cut(s) 2076, 2425
BcnI CCSGG 1 cut(s) 2474
BcoDI GTCTC 2 cut(s) 919, 2226
BfaI CTAG 1 cut(s) 1259
BfmI CTRYAG 1 cut(s) 963
BfoI RGCGCY 1 cut(s) 1803
BfrI CTTAAG 1 cut(s) 977
BglII AGATCT 1 cut(s) 1344
BisI GCNGC 7 cut(s) 184, 708, 917, 963, 972, 2121, 2331
BlpI GCTNAGC 1 cut(s) 1892
BlsI GCNGC 7 cut(s) 185, 709, 918, 964, 973, 2122, 2332
BmcAI AGTACT 1 cut(s) 947
Bme18I GGWCC 6 cut(s) 357, 819, 1221, 1448, 1493, 1613
BmeRI GACNNNNNGTC 1 cut(s) 1227
BmgT120I GGNCC 9 cut(s) 357, 819, 882, 1221, 1448, 1493, 1613, 1766, 1916
BmiI GGNNCC 9 cut(s) 358, 359, 820, 843, 883, 1026, 1305, 1768, 1997
BmrI ACTGGG 2 cut(s) 1023, 1764
BmsI GCATC 7 cut(s) 79, 100, 480, 562, 1282, 1586, 2471
BmuI ACTGGG 2 cut(s) 1023, 1764
BoxI GACNNNNGTC 1 cut(s) 1261
BpiI GAAGAC 3 cut(s) 372, 867, 2379
BplI GAGNNNNNCTC 2 cut(s) 542, 574
BpmI CTGGAG 3 cut(s) 544, 1059, 1846
Bpu10I CCTNAGC 1 cut(s) 1631
Bpu1102I GCTNAGC 1 cut(s) 1892
BpuEI CTTGAG 2 cut(s) 88, 109
BpuMI CCSGG 1 cut(s) 2474
BsaBI GATNNNNATC 2 cut(s) 93, 2133
BsaJI CCNNGG 9 cut(s) 11, 293, 353, 360, 822, 1036, 1318, 1426, 2320
BsaXI ACNNNNNCTCC 2 cut(s) 1123, 1153
Bsc4I CCNNNNNNNGG 8 cut(s) 1324, 1325, 1610, 1714, 1775, 1925, 2326, 2480
Bse1I ACTGG 4 cut(s) 1029, 1115, 1770, 1863
Bse3DI GCAATG 1 cut(s) 1433
Bse8I GATNNNNATC 2 cut(s) 93, 2133
BseDI CCNNGG 9 cut(s) 11, 293, 353, 360, 822, 1036, 1318, 1426, 2320
BseGI GGATG 9 cut(s) 148, 334, 495, 538, 553, 1111, 1273, 1600, 2235
BseJI GATNNNNATC 2 cut(s) 93, 2133
BseLI CCNNNNNNNGG 8 cut(s) 1324, 1325, 1610, 1714, 1775, 1925, 2326, 2480
BseMI GCAATG 1 cut(s) 1433
BseNI ACTGG 4 cut(s) 1029, 1115, 1770, 1863
BseRI GAGGAG 7 cut(s) 75, 317, 320, 389, 1056, 1432, 1984
BseXI GCAGC 5 cut(s) 694, 949, 983, 2107, 2342
BseYI CCCAGC 1 cut(s) 1152
BsgI GTGCAG 1 cut(s) 1178
BshFI GGCC 5 cut(s) 183, 884, 1549, 1767, 1918
BshNI GGYRCC 1 cut(s) 1303
BsiHKAI GWGCWC 2 cut(s) 619, 1048
BsiSI CCGG 2 cut(s) 531, 2474
BslFI GGGAC 6 cut(s) 311, 343, 832, 1578, 1691, 1941
BslI CCNNNNNNNGG 8 cut(s) 1324, 1325, 1610, 1714, 1775, 1925, 2326, 2480
BsmAI GTCTC 2 cut(s) 919, 2226
BsmFI GGGAC 6 cut(s) 311, 343, 832, 1578, 1691, 1941
BsmI GAATGC 2 cut(s) 1677, 2252
BsnI GGCC 5 cut(s) 183, 884, 1549, 1767, 1918
Bsp1286I GDGCHC 2 cut(s) 619, 1048
Bsp1407I TGTACA 2 cut(s) 651, 1191
Bsp1720I GCTNAGC 1 cut(s) 1892
Bsp19I CCATGG 1 cut(s) 1426
BspACI CCGC 7 cut(s) 184, 326, 917, 1718, 1809, 2049, 2484
BspANI GGCC 5 cut(s) 183, 884, 1549, 1767, 1918
BspLI GGNNCC 9 cut(s) 358, 359, 820, 843, 883, 1026, 1305, 1768, 1997
BspMAI CTGCAG 1 cut(s) 967
BspPI GGATC 8 cut(s) 91, 242, 416, 836, 849, 1381, 1474, 1669
BspQI GCTCTTC 1 cut(s) 1642
BspT107I GGYRCC 1 cut(s) 1303
BspTI CTTAAG 1 cut(s) 977
BsrDI GCAATG 1 cut(s) 1433
BsrGI TGTACA 2 cut(s) 651, 1191
BsrI ACTGG 4 cut(s) 1029, 1115, 1770, 1863
BssECI CCNNGG 9 cut(s) 11, 293, 353, 360, 822, 1036, 1318, 1426, 2320
BssSI CACGAG 1 cut(s) 1225
BssT1I CCWWGG 3 cut(s) 11, 822, 1426
Bst2BI CACGAG 1 cut(s) 1225
Bst4CI ACNGT 8 cut(s) 515, 526, 590, 651, 1196, 1413, 1522, 2019
Bst6I CTCTTC 1 cut(s) 1642
BstAFI CTTAAG 1 cut(s) 977
BstAUI TGTACA 2 cut(s) 651, 1191
BstC8I GCNNGC 3 cut(s) 287, 319, 551
BstDSI CCRYGG 1 cut(s) 1426
BstF5I GGATG 9 cut(s) 148, 334, 495, 538, 553, 1111, 1273, 1600, 2235
BstH2I RGCGCY 1 cut(s) 1803
BstHHI GCGC 2 cut(s) 1433, 1802
BstMAI GTCTC 2 cut(s) 919, 2226
BstMWI GCNNNNNNNGC 7 cut(s) 323, 716, 968, 971, 1808, 2196, 2303
BstNSI RCATGY 1 cut(s) 663
BstPAI GACNNNNGTC 1 cut(s) 1261
BstSFI CTRYAG 1 cut(s) 963
BstV1I GCAGC 5 cut(s) 694, 949, 983, 2107, 2342
BstV2I GAAGAC 3 cut(s) 372, 867, 2379
BstX2I RGATCY 5 cut(s) 83, 841, 1344, 1373, 1661
BstXI CCANNNNNNTGG 2 cut(s) 1152, 1427
BstYI RGATCY 5 cut(s) 83, 841, 1344, 1373, 1661
BsuRI GGCC 5 cut(s) 183, 884, 1549, 1767, 1918
BtgI CCRYGG 1 cut(s) 1426
BtsCI GGATG 9 cut(s) 148, 334, 495, 538, 553, 1111, 1273, 1600, 2235
BtsI GCAGTG 3 cut(s) 654, 743, 1566
BtsIMutI CAGTG 8 cut(s) 349, 647, 654, 743, 1122, 1173, 1566, 1777
Cac8I GCNNGC 3 cut(s) 287, 319, 551
CaiI CAGNNNCTG 1 cut(s) 2420
CfoI GCGC 2 cut(s) 1433, 1802
Cfr13I GGNCC 9 cut(s) 357, 819, 882, 1221, 1448, 1493, 1613, 1766, 1916
CseI GACGC 1 cut(s) 1251
CsiI ACCWGGT 1 cut(s) 1144
Csp6I GTAC 6 cut(s) 140, 652, 946, 1192, 2098, 2145
CspCI CAANNNNNGTGG 2 cut(s) 498, 533
CviAII CATG 9 cut(s) 66, 272, 406, 660, 1370, 1427, 1655, 1756, 1924
CviQI GTAC 6 cut(s) 140, 652, 946, 1192, 2098, 2145
DraI TTTAAA 1 cut(s) 1870
DriI GACNNNNNGTC 1 cut(s) 1227
EaeI YGGCCR 1 cut(s) 181
Eam1104I CTCTTC 1 cut(s) 1642
Eam1105I GACNNNNNGTC 1 cut(s) 1227
EarI CTCTTC 1 cut(s) 1642
EciI GGCGGA 1 cut(s) 1733
Ecl136II GAGCTC 1 cut(s) 1046
Eco130I CCWWGG 3 cut(s) 11, 822, 1426
Eco24I GRGCYC 1 cut(s) 1048
Eco32I GATATC 1 cut(s) 687
Eco47I GGWCC 6 cut(s) 357, 819, 1221, 1448, 1493, 1613
Eco53kI GAGCTC 1 cut(s) 1046
EcoICRI GAGCTC 1 cut(s) 1046
EcoO109I RGGNCCY 5 cut(s) 357, 819, 882, 1613, 1766
EcoRV GATATC 1 cut(s) 687
EcoT14I CCWWGG 3 cut(s) 11, 822, 1426
EcoT22I ATGCAT 1 cut(s) 2206
EcoT38I GRGCYC 1 cut(s) 1048
ErhI CCWWGG 3 cut(s) 11, 822, 1426
FaeI CATG 9 cut(s) 69, 275, 409, 663, 1373, 1430, 1658, 1759, 1927
FalI AAGNNNNNCTT 6 cut(s) 146, 178, 852, 884, 960, 992
FaqI GGGAC 6 cut(s) 311, 343, 832, 1578, 1691, 1941
FatI CATG 9 cut(s) 65, 271, 405, 659, 1369, 1426, 1654, 1755, 1923
FauI CCCGC 2 cut(s) 2042, 2477
FauNDI CATATG 1 cut(s) 544
FbaI TGATCA 2 cut(s) 2076, 2425
Fnu4HI GCNGC 7 cut(s) 184, 708, 917, 963, 972, 2121, 2331
FokI GGATG 9 cut(s) 135, 341, 502, 525, 540, 1098, 1260, 1587, 2222
FriOI GRGCYC 1 cut(s) 1048
Fsp4HI GCNGC 7 cut(s) 184, 708, 917, 963, 972, 2121, 2331
FspBI CTAG 1 cut(s) 1259
GlaI GCGC 2 cut(s) 1432, 1801
GluI GCNGC 7 cut(s) 184, 708, 917, 963, 972, 2121, 2331
GsaI CCCAGC 1 cut(s) 1156
GsuI CTGGAG 3 cut(s) 544, 1059, 1846
HaeII RGCGCY 1 cut(s) 1803
HaeIII GGCC 5 cut(s) 183, 884, 1549, 1767, 1918
HapII CCGG 2 cut(s) 531, 2474
HgaI GACGC 1 cut(s) 1251
HhaI GCGC 2 cut(s) 1433, 1802
Hin1II CATG 9 cut(s) 69, 275, 409, 663, 1373, 1430, 1658, 1759, 1927
Hin6I GCGC 2 cut(s) 1431, 1800
HinP1I GCGC 2 cut(s) 1431, 1800
HindIII AAGCTT 1 cut(s) 1889
HpaII CCGG 2 cut(s) 531, 2474
HphI GGTGA 5 cut(s) 902, 1116, 1637, 1875, 2435
Hpy166II GTNNAC 6 cut(s) 654, 665, 1010, 1124, 1496, 2100
Hpy188III TCNNGA 8 cut(s) 81, 335, 561, 1076, 1219, 1403, 1446, 2466
Hpy8I GTNNAC 6 cut(s) 654, 665, 1010, 1124, 1496, 2100
Hpy99I CGWCG 2 cut(s) 753, 1053
HpyAV CCTTC 8 cut(s) 778, 796, 878, 1317, 1461, 1582, 2235, 2320
HpyCH4III ACNGT 8 cut(s) 515, 526, 590, 651, 1196, 1413, 1522, 2019
HpyCH4IV ACGT 2 cut(s) 807, 2193
HpyF10VI GCNNNNNNNGC 7 cut(s) 323, 716, 968, 971, 1808, 2196, 2303
HpySE526I ACGT 2 cut(s) 807, 2193
Hsp92II CATG 9 cut(s) 69, 275, 409, 663, 1373, 1430, 1658, 1759, 1927
HspAI GCGC 2 cut(s) 1431, 1800
KflI GGGWCCC 1 cut(s) 357
Ksp22I TGATCA 2 cut(s) 2076, 2425
LguI GCTCTTC 1 cut(s) 1642
LmnI GCTCC 5 cut(s) 62, 307, 1043, 1672, 1971
Lsp1109I GCAGC 5 cut(s) 694, 949, 983, 2107, 2342
LweI GCATC 7 cut(s) 79, 100, 480, 562, 1282, 1586, 2471
MabI ACCWGGT 1 cut(s) 1144
MaeI CTAG 1 cut(s) 1259
MaeII ACGT 2 cut(s) 807, 2193
MaeIII GTNAC 4 cut(s) 729, 995, 1129, 2338
MboII GAAGA 8 cut(s) 18, 377, 872, 1530, 1629, 2066, 2156, 2384
MfeI CAATTG 3 cut(s) 252, 276, 2169
MflI RGATCY 5 cut(s) 83, 841, 1344, 1373, 1661
MhlI GDGCHC 2 cut(s) 619, 1048
MlyI GAGTC 6 cut(s) 13, 1237, 1721, 1744, 2456, 2486
MmeI TCCRAC 5 cut(s) 1002, 1256, 1541, 1639, 2430
Mph1103I ATGCAT 1 cut(s) 2206
MslI CAYNNNNRTG 3 cut(s) 543, 1425, 1653
MspA1I CMGCKG 2 cut(s) 1475, 2049
MspCI CTTAAG 1 cut(s) 977
MspI CCGG 2 cut(s) 531, 2474
MunI CAATTG 3 cut(s) 252, 276, 2169
Mva1269I GAATGC 2 cut(s) 1677, 2252
MwoI GCNNNNNNNGC 7 cut(s) 323, 716, 968, 971, 1808, 2196, 2303
NciI CCSGG 1 cut(s) 2474
NcoI CCATGG 1 cut(s) 1426
NdeI CATATG 1 cut(s) 544
NlaIII CATG 9 cut(s) 69, 275, 409, 663, 1373, 1430, 1658, 1759, 1927
NlaIV GGNNCC 9 cut(s) 358, 359, 820, 843, 883, 1026, 1305, 1768, 1997
NmuCI GTSAC 2 cut(s) 995, 2338
NsiI ATGCAT 1 cut(s) 2206
NspI RCATGY 1 cut(s) 663
PciSI GCTCTTC 1 cut(s) 1642
PcsI WCGNNNNNNNCGW 1 cut(s) 709
PctI GAATGC 2 cut(s) 1677, 2252
PfeI GAWTC 5 cut(s) 602, 1072, 1094, 2316, 2392
PkrI GCNGC 7 cut(s) 185, 709, 918, 964, 973, 2122, 2332
PleI GAGTC 6 cut(s) 12, 1236, 1720, 1743, 2455, 2485
PpsI GAGTC 6 cut(s) 12, 1236, 1720, 1743, 2455, 2485
PpuMI RGGWCCY 3 cut(s) 357, 819, 1613
PshAI GACNNNNGTC 1 cut(s) 1261
PshBI ATTAAT 2 cut(s) 1791, 2072
Psp124BI GAGCTC 1 cut(s) 1048
Psp5II RGGWCCY 3 cut(s) 357, 819, 1613
PspFI CCCAGC 1 cut(s) 1152
PspN4I GGNNCC 9 cut(s) 358, 359, 820, 843, 883, 1026, 1305, 1768, 1997
PspPI GGNCC 9 cut(s) 357, 819, 882, 1221, 1448, 1493, 1613, 1766, 1916
PspPPI RGGWCCY 3 cut(s) 357, 819, 1613
PstI CTGCAG 1 cut(s) 967
PstNI CAGNNNCTG 1 cut(s) 2420
PsuI RGATCY 5 cut(s) 83, 841, 1344, 1373, 1661
PvuII CAGCTG 1 cut(s) 1475
RsaI GTAC 6 cut(s) 141, 653, 947, 1193, 2099, 2146
RsaNI GTAC 6 cut(s) 140, 652, 946, 1192, 2098, 2145
RseI CAYNNNNRTG 3 cut(s) 543, 1425, 1653
SacI GAGCTC 1 cut(s) 1048
SapI GCTCTTC 1 cut(s) 1642
SatI GCNGC 7 cut(s) 184, 708, 917, 963, 972, 2121, 2331
Sau96I GGNCC 9 cut(s) 357, 819, 882, 1221, 1448, 1493, 1613, 1766, 1916
ScaI AGTACT 1 cut(s) 947
SchI GAGTC 6 cut(s) 13, 1237, 1721, 1744, 2456, 2486
SduI GDGCHC 2 cut(s) 619, 1048
SexAI ACCWGGT 1 cut(s) 1144
SfaNI GCATC 7 cut(s) 79, 100, 480, 562, 1282, 1586, 2471
SfcI CTRYAG 1 cut(s) 963
SinI GGWCC 6 cut(s) 357, 819, 1221, 1448, 1493, 1613
SmiMI CAYNNNNRTG 3 cut(s) 543, 1425, 1653
SmlI CTYRAG 3 cut(s) 103, 124, 977
SmoI CTYRAG 3 cut(s) 103, 124, 977
SsiI CCGC 7 cut(s) 184, 326, 917, 1718, 1809, 2049, 2484
SspI AATATT 1 cut(s) 876
SspMI CTAG 1 cut(s) 1259
SstI GAGCTC 1 cut(s) 1048
StyI CCWWGG 3 cut(s) 11, 822, 1426
TaaI ACNGT 8 cut(s) 515, 526, 590, 651, 1196, 1413, 1522, 2019
TaiI ACGT 2 cut(s) 810, 2196
TaqI TCGA 3 cut(s) 712, 1051, 1580
TatI WGTACW 4 cut(s) 651, 945, 1191, 2097
TauI GCSGC 2 cut(s) 186, 919
TfiI GAWTC 5 cut(s) 602, 1072, 1094, 2316, 2392
TscAI CASTG 8 cut(s) 349, 654, 661, 750, 1122, 1180, 1566, 1777
TseFI GTSAC 2 cut(s) 995, 2338
TseI GCWGC 5 cut(s) 707, 962, 971, 2120, 2330
Tsp45I GTSAC 2 cut(s) 995, 2338
TspDTI ATGAA 8 cut(s) 12, 758, 873, 1107, 1716, 2145, 2381, 2385
TspGWI ACGGA 1 cut(s) 766
TspRI CASTG 8 cut(s) 349, 654, 661, 750, 1122, 1180, 1566, 1777
Vha464I CTTAAG 1 cut(s) 977
VpaK11BI GGWCC 6 cut(s) 357, 819, 1221, 1448, 1493, 1613
VspI ATTAAT 2 cut(s) 1791, 2072
XapI RAATTY 5 cut(s) 232, 460, 935, 1780, 2353
XceI RCATGY 1 cut(s) 663
XcmI CCANNNNNNNNNTGG 3 cut(s) 1149, 1503, 1655
XspI CTAG 1 cut(s) 1259
ZrmI AGTACT 1 cut(s) 947
Zsp2I ATGCAT 1 cut(s) 2206
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.