MD11G1116900.v1.1

BAHD acyltransferase At5g47980-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0000200
Physical Location & Seq
Forward (+)
10589322 .. 10590734
1413 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1116900.v1.1.491

Sequence Viewer

Length: 1413 bp
ATGGTAACCGTGCCTACTTATATGGACCAACTTTTTATGAAAATCACAACTTGTGTGGAGCAAAAGATGGCTTCAGAGATCAAGGTTGAAGTGATCCACAAGGAAACAATTAAACCATTCTATCCAACTCCTGACCACCTAAGAAGCTTGAGCCTCTCTGTTTTTGATCAGTATCAACCTGAAGTTTATATCCCACTACTTATCTTCTATCCCAACAACAATAACAGCGACAACAGCCAGGTCAAAAACAGTGATCATCGTTCATTGTTTGCCGAAAGGTCCATCCTTCTAAAGAAATCACTGTCTGAAGCCCTCACTCGATTCTACCCCTTCGCCGGAGAATTCAAATACAATGTTTCAATCAATTGCAATGACCATGGGGCTGCATTTCTTGAAGCCCAAGTCAACTGTCCTGTATCGAAGATTTTGAAAAACCCCGATTTTGAGATCCTAAAACAGTTGCTTCCAACTGATTGTATGTCCACGCAAGCTGAGACAGGATATCTTGTGCTAGTCCAGGCCAACTTATTTGAATGTGGAGGATTGGCAATCGGGATCAGCATTTACCATAAAGCCGCCGATGCTTTTACAACCACCACATTCATCAAATGTTGGGCTGCACTTGCTTTTGGCTCGGCCAGTAGTACTACTGATCACCACGTATTGCTTCCCGAGGAATTCGGTGTTGCAGCTTCTCTTGCACCATCCCATGATTCCTTCGACTCACCAGGAGCTCCTGTGACATTTTCTACGGAGAAACTCACAACGAGGAGGTTTGTGTTTGATGCTTCGAAAATTTCTGCTCTCAAGTTTAAGGCTGCTAGCGCCACGGTGCCAAACCCAACGCGTGTTGAAGTAGTATCGGCAGTCATTTGGAAAAGCCTAATACAAGCATCAAGATCGAAGTTTGGTTTTATGAAGCCATCCACATGGTGTGCAATGTTGAACTTGCGCAAACGATCGGGGCAGGCCGTGACAGAAAACATACAGGGGAATTTCGTGTGGTTCGCTGCAGCATTGACGACGGAAGAGCAGAGCGAAGTAGAGCTCGAGAGCTTAGTTGGTAAACTCAGGAAAGGGATTGCGGAATATAAGGAAAAGCATCCAAATGGAGTCAGTGGTGAGGAAGTATTTCAAACCATCAAAGCGTTTGTGAGCCTTTTCTTGAGAGGAGACTTAGAAATCTATACTTGCAGCAGCTGGTGCAGGTTTCCGTTGTATGAAACCAATTTCGGATGGGGAAAGCCGACATGGGTGACTTCTCAACCATTCAATGATTTATTTTTTTTGACTGATACGAGAGATGGTGATGGCATAGAATTGTCCTTGTCACTGAAAGAAGACGTCATGACCATATTCGAAAGCAGCGAGGACCTGCTCACGTATGCTTCTCTGAATCCGACTGTCATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00940 ko00941 ko00945 ko01100 ko01110 map00940 map00941 map00945 map01100 map01110
Pfam Domains
Protein Families
Transferase

Protein Analysis

471

Amino Acids

52.49

Weight (kDa)

5.6

Isoelectric Point (pI)

42.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 28 - 457 4.3e-76 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000200)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G24420 AT1G24420
fragaria_vesca FvH4_3g15900 FvH4_3g15901 FvH4_3g15902 FvH4_3g15903 FvH4_3g15910 FvH4_3g16350 FvH4_3g16950 FvH4_3g17000 FvH4_3g17010 FvH4_3g35170 FvH4_4g17550
malus_domestica MD02G1273000.v1.1 MD03G1110800.v1.1 MD05G1218500.v1.1 MD05G1218600.v1.1 MD05G1218800.v1.1 MD05G1218900.v1.1 MD05G1219000.v1.1 MD09G1267700.v1.1 MD10G1199600.v1.1 MD10G1199700.v1.1 MD10G1200000.v1.1 MD10G1200100.v1.1 MD10G1200300.v1.1 MD10G1201000.v1.1 MD11G1116900.v1.1 MD11G1117000.v1.1 MD11G1275900.v1.1 MD13G1109500.v1.1 MD14G1011700.v1.1 MD14G1015400.v1.1 MD14G1015500.v1.1
prunus_persica Prupe.4G140700_v2.0.a1 Prupe.4G140800_v2.0.a1 Prupe.4G141500_v2.0.a1
pyrus_communis pycom02g23390 pycom05g19930 pycom05g19940 pycom05g19970 pycom05g19980 pycom05g19990 pycom05g20000 pycom05g20020 pycom10g17190 pycom10g17200 pycom10g17210 pycom10g17220 pycom10g24650 pycom11g24430 pycom14g01050 pycom14g01330 pycom16g06450
rosa_chinensis RchiOBHm_Chr4g0391831 RchiOBHm_Chr4g0391841 RchiOBHm_Chr4g0407921 RchiOBHm_Chr4g0408021 RchiOBHm_Chr4g0412981 RchiOBHm_Chr4g0415601 RchiOBHm_Chr4g0415621 RchiOBHm_Chr4g0421461 RchiOBHm_Chr4g0431781 RchiOBHm_Chr5g0026651 RchiOBHm_Chr5g0026721 RchiOBHm_Chr5g0026731 RchiOBHm_Chr5g0026741 RchiOBHm_Chr5g0026751 RchiOBHm_Chr5g0026821 RchiOBHm_Chr5g0028341
rosa_laevigata RLG00000006890 RLG00000007680 RLG00000007682 RLG00000008056 RLG00000008057 RLG00000008058 RLG00000008060 RLG00000008681 RLG00000032943 RLG00000032951 RLG00000032955 RLG00000032956 RLG00000032957 RLG00000032958 RLG00000032961 RLG00000033083 RLG00000033084
rosa_multiflora Rmu_co7991326.1_g000001 Rmu_co8439139.1_g000001 Rmu_co8448401.1_g000001 Rmu_sc0001194.1_g000015 Rmu_sc0001962.1_g000015 Rmu_sc0002073.1_g000012 Rmu_sc0004490.1_g000006 Rmu_sc0004599.1_g000009 Rmu_sc0004805.1_g000044 Rmu_sc0008526.1_g000001 Rmu_ssc0000172.1_g000021 Rmu_ssc0000172.1_g000031 Rmu_ssc0000172.1_g000032
rosa_roxburghii Rroxscaffold_1G00051360 Rroxscaffold_1G00051390 Rroxscaffold_1G00052710 Rroxscaffold_1G00052750 Rroxscaffold_1G00052810 Rroxscaffold_1G00052820 Rroxscaffold_4G00321060 Rroxscaffold_4G00321070 Rroxscaffold_5G00352550 Rroxscaffold_5G00359410
rosa_rugosa Rorug01G0079700 Rorug01G0080700 Rorug04G0083200 Rorug04G0083400 Rorug04G0135400 Rorug04G0135500.1 Rorug04G0135900 Rorug04G0171400 Rorug04G0252300 Rorug05G0095200 Rorug05G0095300 Rorug05G0095400 Rorug05G0402400
rosa_samantha Rh1DG103500 Rh4AG176900 Rh4AG196400 Rh4AG232100 Rh4AG308800 Rh4DG141600 Rh4DG194000 Rh4DG194100 Rh4DG194300 Rh4DG230600 Rh5AG177800 Rh5AG188100 Rh5AG188800 Rh5AG188900 Rh5AG199400 Rh5DG187300 Rh5DG187400 Rh5DG188000 Rh5DG199900
rosa_wichuraiana Rw0G018630 Rw1G007730 Rw4G012100 Rw4G016700 Rw4G020190 Rw5G016100 Rw5G017090 Rw5G017100 Rw5G017110 Rw5G018170 Rw5G018180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1347
Acc16I TGCGCA 1 cut(s) 953
Acc36I ACCTGC 2 cut(s) 1197, 1383
AccB1I GGYRCC 1 cut(s) 832
AccII CGCG 1 cut(s) 847
AciI CCGC 2 cut(s) 576, 1085
AclWI GGATC 3 cut(s) 88, 442, 563
AcoI YGGCCR 1 cut(s) 636
AcsI RAATTY 4 cut(s) 341, 677, 795, 994
AcuI CTGAAG 3 cut(s) 57, 201, 327
AcyI GRCGYC 1 cut(s) 1344
AdeI CACNNNGTG 1 cut(s) 933
AfaI GTAC 1 cut(s) 646
AfiI CCNNNNNNNGG 1 cut(s) 335
AflIII ACRYGT 1 cut(s) 845
AjnI CCWGG 3 cut(s) 237, 516, 727
AluBI AGCT 7 cut(s) 147, 491, 692, 734, 1048, 1056, 1200
AluI AGCT 7 cut(s) 147, 491, 692, 734, 1048, 1056, 1200
Alw21I GWGCWC 2 cut(s) 736, 1050
Alw26I GTCTC 2 cut(s) 488, 1167
AlwI GGATC 3 cut(s) 88, 442, 563
AlwNI CAGNNNCTG 1 cut(s) 1200
Ama87I CYCGRG 2 cut(s) 671, 1049
AoxI GGCC 3 cut(s) 519, 636, 969
ApeKI GCWGC 9 cut(s) 383, 617, 689, 818, 1010, 1013, 1194, 1197, 1365
ApoI RAATTY 4 cut(s) 341, 677, 795, 994
Asp700I GAANNNNTTC 1 cut(s) 1131
AspLEI GCGC 2 cut(s) 827, 954
AspS9I GGNCC 3 cut(s) 25, 279, 1372
AsuHPI GGTGA 5 cut(s) 647, 717, 1133, 1267, 1319
AsuII TTCGAA 2 cut(s) 791, 1359
AsuNHI GCTAGC 1 cut(s) 821
AvaI CYCGRG 2 cut(s) 671, 1049
AvaII GGWCC 3 cut(s) 25, 279, 1372
BanI GGYRCC 1 cut(s) 832
BanII GRGCYC 2 cut(s) 736, 1050
BbsI GAAGAC 1 cut(s) 1347
Bbv12I GWGCWC 2 cut(s) 736, 1050
BbvI GCAGC 9 cut(s) 370, 604, 701, 805, 997, 1025, 1206, 1209, 1377
BccI CCATC 8 cut(s) 61, 290, 712, 931, 1148, 1230, 1298, 1304
BceAI ACGGC 1 cut(s) 956
BcgI CGANNNNNNTGC 2 cut(s) 882, 916
BciT130I CCWGG 3 cut(s) 239, 518, 729
BclI TGATCA 3 cut(s) 166, 253, 652
BcoDI GTCTC 2 cut(s) 488, 1167
BfaI CTAG 2 cut(s) 512, 822
BfmI CTRYAG 1 cut(s) 1011
BfoI RGCGCY 1 cut(s) 828
BfuAI ACCTGC 2 cut(s) 1197, 1383
BmcAI AGTACT 1 cut(s) 646
Bme1390I CCNGG 3 cut(s) 239, 518, 729
Bme18I GGWCC 3 cut(s) 25, 279, 1372
BmeT110I CYCGRG 2 cut(s) 671, 1049
BmgT120I GGNCC 3 cut(s) 25, 279, 1372
BmiI GGNNCC 1 cut(s) 834
BmrFI CCNGG 3 cut(s) 239, 518, 729
BmsI GCATC 4 cut(s) 571, 775, 902, 1111
BmtI GCTAGC 1 cut(s) 825
BpiI GAAGAC 1 cut(s) 1347
Bpu14I TTCGAA 2 cut(s) 791, 1359
BpuEI CTTGAG 3 cut(s) 169, 791, 1186
BsaAI YACGTR 2 cut(s) 661, 1383
BsaBI GATNNNNATC 1 cut(s) 171
BsaHI GRCGYC 1 cut(s) 1344
BsaJI CCNNGG 3 cut(s) 376, 672, 828
BsaXI ACNNNNNCTCC 2 cut(s) 723, 753
Bsc4I CCNNNNNNNGG 1 cut(s) 335
Bse1I ACTGG 1 cut(s) 639
Bse3DI GCAATG 2 cut(s) 376, 945
Bse8I GATNNNNATC 1 cut(s) 171
BseBI CCWGG 3 cut(s) 239, 518, 729
BseDI CCNNGG 3 cut(s) 376, 672, 828
BseGI GGATG 5 cut(s) 282, 704, 923, 1102, 1241
BseJI GATNNNNATC 1 cut(s) 171
BseLI CCNNNNNNNGG 1 cut(s) 335
BseMI GCAATG 2 cut(s) 376, 945
BseMII CTCAG 2 cut(s) 483, 1084
BseNI ACTGG 1 cut(s) 639
BseRI GAGGAG 2 cut(s) 784, 1185
BseXI GCAGC 9 cut(s) 370, 604, 701, 805, 997, 1025, 1206, 1209, 1377
BsgI GTGCAG 2 cut(s) 603, 1225
Bsh1236I CGCG 1 cut(s) 847
Bsh1285I CGRYCG 1 cut(s) 962
BshFI GGCC 3 cut(s) 521, 638, 971
BshNI GGYRCC 1 cut(s) 832
BsiEI CGRYCG 1 cut(s) 962
BsiHKAI GWGCWC 2 cut(s) 736, 1050
BsiHKCI CYCGRG 2 cut(s) 671, 1049
BsiSI CCGG 1 cut(s) 336
BslI CCNNNNNNNGG 1 cut(s) 335
BsmAI GTCTC 2 cut(s) 488, 1167
BsnI GGCC 3 cut(s) 521, 638, 971
BsoBI CYCGRG 2 cut(s) 671, 1049
Bsp119I TTCGAA 2 cut(s) 791, 1359
Bsp1286I GDGCHC 2 cut(s) 736, 1050
Bsp143I GATC 9 cut(s) 78, 93, 166, 253, 447, 555, 652, 899, 959
Bsp19I CCATGG 1 cut(s) 376
BspACI CCGC 2 cut(s) 576, 1085
BspANI GGCC 3 cut(s) 521, 638, 971
BspCNI CTCAG 2 cut(s) 484, 1083
BspFNI CGCG 1 cut(s) 847
BspHI TCATGA 1 cut(s) 1347
BspLI GGNNCC 1 cut(s) 834
BspMAI CTGCAG 1 cut(s) 1015
BspMI ACCTGC 2 cut(s) 1197, 1383
BspOI GCTAGC 1 cut(s) 825
BspPI GGATC 3 cut(s) 88, 442, 563
BspQI GCTCTTC 1 cut(s) 1023
BspT104I TTCGAA 2 cut(s) 791, 1359
BspT107I GGYRCC 1 cut(s) 832
BsrDI GCAATG 2 cut(s) 376, 945
BsrI ACTGG 1 cut(s) 639
BssECI CCNNGG 3 cut(s) 376, 672, 828
BssMI GATC 9 cut(s) 78, 93, 166, 253, 447, 555, 652, 899, 959
BssNI GRCGYC 1 cut(s) 1344
BssT1I CCWWGG 1 cut(s) 376
Bst2UI CCWGG 3 cut(s) 239, 518, 729
Bst4CI ACNGT 7 cut(s) 10, 251, 303, 410, 459, 832, 1405
Bst6I CTCTTC 1 cut(s) 1023
BstACI GRCGYC 1 cut(s) 1344
BstAPI GCANNNNNTGC 1 cut(s) 1203
BstBAI YACGTR 2 cut(s) 661, 1383
BstBI TTCGAA 2 cut(s) 791, 1359
BstC8I GCNNGC 3 cut(s) 489, 823, 969
BstDEI CTNAG 5 cut(s) 140, 492, 1057, 1070, 1177
BstDSI CCRYGG 2 cut(s) 376, 828
BstEII GGTNACC 1 cut(s) 4
BstF5I GGATG 5 cut(s) 282, 704, 923, 1102, 1241
BstFNI CGCG 1 cut(s) 847
BstH2I RGCGCY 1 cut(s) 828
BstHHI GCGC 2 cut(s) 827, 954
BstKTI GATC 9 cut(s) 81, 96, 169, 256, 450, 558, 655, 902, 962
BstMAI GTCTC 2 cut(s) 488, 1167
BstMBI GATC 9 cut(s) 78, 93, 166, 253, 447, 555, 652, 899, 959
BstMCI CGRYCG 1 cut(s) 962
BstMWI GCNNNNNNNGC 6 cut(s) 234, 581, 623, 698, 824, 1203
BstNI CCWGG 3 cut(s) 239, 518, 729
BstPI GGTNACC 1 cut(s) 4
BstSCI CCNGG 3 cut(s) 237, 516, 727
BstSFI CTRYAG 1 cut(s) 1011
BstUI CGCG 1 cut(s) 847
BstV1I GCAGC 9 cut(s) 370, 604, 701, 805, 997, 1025, 1206, 1209, 1377
BstV2I GAAGAC 1 cut(s) 1347
BstX2I RGATCY 1 cut(s) 447
BstXI CCANNNNNNTGG 1 cut(s) 930
BstYI RGATCY 1 cut(s) 447
BsuRI GGCC 3 cut(s) 521, 638, 971
BtgI CCRYGG 2 cut(s) 376, 828
BtsCI GGATG 5 cut(s) 282, 704, 923, 1102, 1241
BtsIMutI CAGTG 4 cut(s) 256, 299, 1123, 1331
BveI ACCTGC 2 cut(s) 1197, 1383
Cac8I GCNNGC 3 cut(s) 489, 823, 969
CaiI CAGNNNCTG 1 cut(s) 1200
CciI TCATGA 1 cut(s) 1347
CfoI GCGC 2 cut(s) 827, 954
Cfr13I GGNCC 3 cut(s) 25, 279, 1372
Csp6I GTAC 1 cut(s) 645
CspCI CAANNNNNGTGG 2 cut(s) 36, 71
CviAII CATG 5 cut(s) 377, 710, 930, 1251, 1348
CviQI GTAC 1 cut(s) 645
DdeI CTNAG 5 cut(s) 140, 492, 1057, 1070, 1177
DpnI GATC 9 cut(s) 80, 95, 168, 255, 449, 557, 654, 901, 961
DpnII GATC 9 cut(s) 78, 93, 166, 253, 447, 555, 652, 899, 959
DraIII CACNNNGTG 1 cut(s) 933
EaeI YGGCCR 1 cut(s) 636
Eam1104I CTCTTC 1 cut(s) 1023
EarI CTCTTC 1 cut(s) 1023
Ecl136II GAGCTC 2 cut(s) 734, 1048
Eco130I CCWWGG 1 cut(s) 376
Eco24I GRGCYC 2 cut(s) 736, 1050
Eco32I GATATC 1 cut(s) 503
Eco47I GGWCC 3 cut(s) 25, 279, 1372
Eco53kI GAGCTC 2 cut(s) 734, 1048
Eco57I CTGAAG 3 cut(s) 57, 201, 327
Eco88I CYCGRG 2 cut(s) 671, 1049
Eco91I GGTNACC 1 cut(s) 4
EcoICRI GAGCTC 2 cut(s) 734, 1048
EcoO109I RGGNCCY 1 cut(s) 1372
EcoO65I GGTNACC 1 cut(s) 4
EcoRI GAATTC 2 cut(s) 341, 677
EcoRII CCWGG 3 cut(s) 237, 516, 727
EcoRV GATATC 1 cut(s) 503
EcoT14I CCWWGG 1 cut(s) 376
EcoT38I GRGCYC 2 cut(s) 736, 1050
ErhI CCWWGG 1 cut(s) 376
FaeI CATG 5 cut(s) 380, 713, 933, 1254, 1351
FatI CATG 5 cut(s) 376, 709, 929, 1250, 1347
FbaI TGATCA 3 cut(s) 166, 253, 652
FokI GGATG 5 cut(s) 269, 691, 910, 1089, 1248
FriOI GRGCYC 2 cut(s) 736, 1050
FspBI CTAG 2 cut(s) 512, 822
FspI TGCGCA 1 cut(s) 953
GlaI GCGC 2 cut(s) 826, 953
HaeII RGCGCY 1 cut(s) 828
HaeIII GGCC 3 cut(s) 521, 638, 971
HapII CCGG 1 cut(s) 336
HhaI GCGC 2 cut(s) 827, 954
Hin1I GRCGYC 1 cut(s) 1344
Hin1II CATG 5 cut(s) 380, 713, 933, 1254, 1351
Hin6I GCGC 2 cut(s) 825, 952
HinP1I GCGC 2 cut(s) 825, 952
HincII GTYRAC 1 cut(s) 406
HindII GTYRAC 1 cut(s) 406
HindIII AAGCTT 1 cut(s) 145
HinfI GANTC 5 cut(s) 321, 713, 722, 1113, 1396
HpaII CCGG 1 cut(s) 336
HphI GGTGA 5 cut(s) 647, 717, 1133, 1267, 1319
Hpy166II GTNNAC 3 cut(s) 406, 483, 1067
Hpy188I TCNGA 5 cut(s) 76, 307, 1235, 1395, 1401
Hpy188III TCNNGA 9 cut(s) 131, 392, 553, 671, 897, 1051, 1072, 1165, 1348
Hpy8I GTNNAC 3 cut(s) 406, 483, 1067
Hpy99I CGWCG 1 cut(s) 1027
HpyAV CCTTC 3 cut(s) 296, 340, 727
HpyCH4III ACNGT 7 cut(s) 10, 251, 303, 410, 459, 832, 1405
HpyCH4IV ACGT 3 cut(s) 660, 1344, 1382
HpyCH4V TGCA 9 cut(s) 369, 386, 620, 689, 701, 938, 1013, 1194, 1206
HpyF10VI GCNNNNNNNGC 6 cut(s) 234, 581, 623, 698, 824, 1203
HpyF3I CTNAG 5 cut(s) 140, 492, 1057, 1070, 1177
HpySE526I ACGT 3 cut(s) 660, 1344, 1382
Hsp92I GRCGYC 1 cut(s) 1344
Hsp92II CATG 5 cut(s) 380, 713, 933, 1254, 1351
HspAI GCGC 2 cut(s) 825, 952
Ksp22I TGATCA 3 cut(s) 166, 253, 652
Kzo9I GATC 9 cut(s) 78, 93, 166, 253, 447, 555, 652, 899, 959
LguI GCTCTTC 1 cut(s) 1023
LmnI GCTCC 3 cut(s) 58, 731, 739
Lsp1109I GCAGC 9 cut(s) 370, 604, 701, 805, 997, 1025, 1206, 1209, 1377
LweI GCATC 4 cut(s) 571, 775, 902, 1111
MaeI CTAG 2 cut(s) 512, 822
MaeII ACGT 3 cut(s) 660, 1344, 1382
MaeIII GTNAC 5 cut(s) 4, 739, 973, 1255, 1329
MalI GATC 9 cut(s) 80, 95, 168, 255, 449, 557, 654, 901, 961
MboI GATC 9 cut(s) 78, 93, 166, 253, 447, 555, 652, 899, 959
MboII GAAGA 4 cut(s) 196, 433, 1040, 1352
MfeI CAATTG 1 cut(s) 364
MflI RGATCY 1 cut(s) 447
MhlI GDGCHC 2 cut(s) 736, 1050
MluCI AATT 8 cut(s) 108, 341, 364, 677, 795, 994, 1228, 1319
MluI ACGCGT 1 cut(s) 845
MlyI GAGTC 2 cut(s) 716, 1122
MmeI TCCRAC 2 cut(s) 149, 491
MnlI CCTC 9 cut(s) 164, 323, 533, 667, 762, 765, 1117, 1163, 1363
MroXI GAANNNNTTC 1 cut(s) 1131
MseI TTAA 2 cut(s) 111, 813
MslI CAYNNNNRTG 2 cut(s) 928, 1107
MspA1I CMGCKG 1 cut(s) 1200
MspI CCGG 1 cut(s) 336
MspR9I CCNGG 3 cut(s) 239, 518, 729
MunI CAATTG 1 cut(s) 364
MvaI CCWGG 3 cut(s) 239, 518, 729
MvnI CGCG 1 cut(s) 847
MwoI GCNNNNNNNGC 6 cut(s) 234, 581, 623, 698, 824, 1203
NcoI CCATGG 1 cut(s) 376
NdeII GATC 9 cut(s) 78, 93, 166, 253, 447, 555, 652, 899, 959
NheI GCTAGC 1 cut(s) 821
NlaIII CATG 5 cut(s) 380, 713, 933, 1254, 1351
NlaIV GGNNCC 1 cut(s) 834
NmeAIII GCCGAG 1 cut(s) 614
NmuCI GTSAC 4 cut(s) 739, 973, 1255, 1329
NsbI TGCGCA 1 cut(s) 953
NspV TTCGAA 2 cut(s) 791, 1359
PaeR7I CTCGAG 1 cut(s) 1049
PagI TCATGA 1 cut(s) 1347
PciSI GCTCTTC 1 cut(s) 1023
PcsI WCGNNNNNNNCGW 1 cut(s) 1365
PdmI GAANNNNTTC 1 cut(s) 1131
PfeI GAWTC 3 cut(s) 321, 713, 1396
Ple19I CGATCG 1 cut(s) 962
PleI GAGTC 2 cut(s) 716, 1121
PpsI GAGTC 2 cut(s) 716, 1121
Ppu21I YACGTR 2 cut(s) 661, 1383
PpuMI RGGWCCY 1 cut(s) 1372
Psp124BI GAGCTC 2 cut(s) 736, 1050
Psp5II RGGWCCY 1 cut(s) 1372
Psp6I CCWGG 3 cut(s) 237, 516, 727
PspEI GGTNACC 1 cut(s) 4
PspGI CCWGG 3 cut(s) 237, 516, 727
PspN4I GGNNCC 1 cut(s) 834
PspPI GGNCC 3 cut(s) 25, 279, 1372
PspPPI RGGWCCY 1 cut(s) 1372
PstI CTGCAG 1 cut(s) 1015
PstNI CAGNNNCTG 1 cut(s) 1200
PsuI RGATCY 1 cut(s) 447
PvuI CGATCG 1 cut(s) 962
PvuII CAGCTG 1 cut(s) 1200
RsaI GTAC 1 cut(s) 646
RsaNI GTAC 1 cut(s) 645
RseI CAYNNNNRTG 2 cut(s) 928, 1107
SacI GAGCTC 2 cut(s) 736, 1050
SapI GCTCTTC 1 cut(s) 1023
SaqAI TTAA 2 cut(s) 111, 813
Sau3AI GATC 9 cut(s) 78, 93, 166, 253, 447, 555, 652, 899, 959
Sau96I GGNCC 3 cut(s) 25, 279, 1372
ScaI AGTACT 1 cut(s) 646
SchI GAGTC 2 cut(s) 716, 1122
ScrFI CCNGG 3 cut(s) 239, 518, 729
SduI GDGCHC 2 cut(s) 736, 1050
SfaNI GCATC 4 cut(s) 571, 775, 902, 1111
SfcI CTRYAG 1 cut(s) 1011
Sfr274I CTCGAG 1 cut(s) 1049
SfuI TTCGAA 2 cut(s) 791, 1359
SinI GGWCC 3 cut(s) 25, 279, 1372
SlaI CTCGAG 1 cut(s) 1049
SmiMI CAYNNNNRTG 2 cut(s) 928, 1107
SmlI CTYRAG 4 cut(s) 148, 806, 1049, 1165
SmoI CTYRAG 4 cut(s) 148, 806, 1049, 1165
Sse9I AATT 8 cut(s) 108, 341, 364, 677, 795, 994, 1228, 1319
SsiI CCGC 2 cut(s) 576, 1085
SspMI CTAG 2 cut(s) 512, 822
SstI GAGCTC 2 cut(s) 736, 1050
StyD4I CCNGG 3 cut(s) 237, 516, 727
StyI CCWWGG 1 cut(s) 376
TaaI ACNGT 7 cut(s) 10, 251, 303, 410, 459, 832, 1405
TaiI ACGT 3 cut(s) 663, 1347, 1385
TaqI TCGA 7 cut(s) 319, 419, 720, 791, 902, 1050, 1359
TasI AATT 8 cut(s) 108, 341, 364, 677, 795, 994, 1228, 1319
TatI WGTACW 1 cut(s) 644
TauI GCSGC 1 cut(s) 578
TfiI GAWTC 3 cut(s) 321, 713, 1396
Tru1I TTAA 2 cut(s) 111, 813
Tru9I TTAA 2 cut(s) 111, 813
TscAI CASTG 4 cut(s) 256, 306, 1123, 1338
TseFI GTSAC 4 cut(s) 739, 973, 1255, 1329
TseI GCWGC 9 cut(s) 383, 617, 689, 818, 1010, 1013, 1194, 1197, 1365
Tsp45I GTSAC 4 cut(s) 739, 973, 1255, 1329
TspDTI ATGAA 5 cut(s) 53, 252, 592, 932, 1236
TspGWI ACGGA 3 cut(s) 767, 1040, 1203
TspRI CASTG 4 cut(s) 256, 306, 1123, 1338
VpaK11BI GGWCC 3 cut(s) 25, 279, 1372
XapI RAATTY 4 cut(s) 341, 677, 795, 994
XhoI CTCGAG 1 cut(s) 1049
XmnI GAANNNNTTC 1 cut(s) 1131
XspI CTAG 2 cut(s) 512, 822
ZraI GACGTC 1 cut(s) 1345
ZrmI AGTACT 1 cut(s) 646
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.