Rorug05G0095300

BAHD acyltransferase At5g47980-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
8477791 .. 8483496
5706 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0095300.1

Sequence Viewer

Length: 1965 bp
ATGCAGAGAGCTTCCATTCTCTGTTGTTCAAATCCACTCCTTCCCATCCCCACTTTCCCACCCACCACTCATAAACTCGCTGCCGCTTCCCTTCAAACTCGGCACACTCGTCTTGACTCAGTTTCCTCACCTCTCCGACTTCCCCTGAATCGTCTGCACAATTACCGCCTTGCCCTCCCTCCCCTACACAGCACTGAGATTGTTGAGACTGCTGAGGTGGAGTCAGGATTTGTTAGTGTTGGTTACGTTGCCAATGTCCATGGGCTTCAAGGAGAAATTCGTGTGAAGCCTAGCACTGACTTTCCTGAATTGCGATTTGCTGAGCCTGGAAGAAGATGGTTGCGACAACAAATATCAGGCCAAGAAAGAGTTGAAGAAGTTGAGCTGGTGGAGGGAAGAGGACACCCTGGCCAGAAGAGTTGGATACTTAGATTGAGAGGAATTGACAATGTGGACCAGGCTAGGCAGCTTATTGGTTCAACGTTACTTGTGAGGGAAGAAGATAGGCCACAGTTGGAAGAAGGTGAAATCTATACTCGTGATCTAGTCGGAATGAGAGTTATTCTCAAGGAAACAGGTAAACCTGTGGGAAATGTTGTTAATGTTTTCAACAGCGGAGCGAGCGATCTTCTACAGGTCATGCTTGATTCATCGCTTGATATTCTTGACTCAACTGGCAAGCCAAAGCCAGCAGGAACAACATTATCTGGTCACCTTGTGTTGATACCGTTTGTTGAAGAAATTGTTCCAGATGTTGATATAAAGAAAAAAGAAATGCAGATTACACCTCCAAAGGGACTCCTTGAACTAAATTTACGCTTTGATGAGAGATCGAAGAAAGAAAGGCGCCAGATTGAATGGAAAGAGAGAAAAAAGTCCCAGAAGCGCCTCATAGCAGCAAAAAAGAAGCTGTGTGAAATGGATCAAAAACATGTGTTTGATGGGTTAAGATTTGGAGAGAAAGCACAACGGAGCTTACTTGCTAATCAGATTGTTGGTGTTAATTCACTGTTACTTCAACAAGCTCTAGAAAATGTTGAGATACATTCTAAAAGATTGAATGTGACTGAGATGGTCAGTGCGCTTAAAGCAGAAGAAACAAGTAATACTCTGGAAATATCAGAGAAATGTCTCATTTCCTCTGCAAGCGAAGATAAGCTGAGTGCACATTTCCATCTTCAAGAGAAGGGAGCAGATCTTTTATCTAAAGGCAAAGTTGCCATTGCTTTAGTCGTAAACAATTCCTACGACACAGAGAACTCTATGTCTTCCTTTGTTCAGACATTACATCGTGACAATCAGAGACTTTTAAAGATGGAAGACCGTGCCTGGGTTCCTTTGATTTTGGTTTGCTCAGCTCAGAAAATTGAATCTTTAAAGATGCATTTCTCAGAAAATGATTACTTCGGCTTTGACTCCGAAAAGGTCCACTTCTTTGAGGAAGAGAAACTTCCAGTTGTCAGCAATTCAATGGAAGAAGAGAAGAAGCATAAGATTTTGATGAAATCACCTTGGGAAATTCTTCAATCACCAGTTGGATCAGGAGGAGTTTTCAGCTTGCTTTCGTCACACAATATTCCGGAGAATCTAAGTGAGATGGGTGTCGAGTATATTGAGATATGCAGCACCAATCCAAGAAATGTAGGTGCAAACTCACTACTTCTCGGGTTTGTTAATAAGAACAAAGCTGATGTTGGGATCCAAATCTTCAAAGATACAAATGATTTTGAAGAGAGTTTCGACGTGATATTCTCAACAGACCATATGAAGAAGTTGACAAAGCAGCTCAATAGACTCCAGATCAATGCAACTGTAAAGCAAAATGCGTATGTTGAGAGGGTGGACAAGGAGTGGGTTGATGTTAACCCCAGTTCTCCCAACTCATATGAGTTTGATTGCACGATTTACAGCTCTTTAAAGGCCTGTTCTTTCGATAAGCTTTGTATAATGGAGGTTACAGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

654

Amino Acids

73.82

Weight (kDa)

6.16

Isoelectric Point (pI)

48.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RimM PF01782 80 - 167 1.5e-19 RimM N-terminal domain
PRC PF05239 174 - 268 1.2e-08 PRC-barrel domain
PRC_RimM PF24986 181 - 267 1.4e-12 RimM PRC barrel domain
UDPGP PF01704 442 - 575 8.8e-06 UTP--glucose-1-phosphate uridylyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000200)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G24420 AT1G24420
fragaria_vesca FvH4_3g15900 FvH4_3g15901 FvH4_3g15902 FvH4_3g15903 FvH4_3g15910 FvH4_3g16350 FvH4_3g16950 FvH4_3g17000 FvH4_3g17010 FvH4_3g35170 FvH4_4g17550
malus_domestica MD02G1273000.v1.1 MD03G1110800.v1.1 MD05G1218500.v1.1 MD05G1218600.v1.1 MD05G1218800.v1.1 MD05G1218900.v1.1 MD05G1219000.v1.1 MD09G1267700.v1.1 MD10G1199600.v1.1 MD10G1199700.v1.1 MD10G1200000.v1.1 MD10G1200100.v1.1 MD10G1200300.v1.1 MD10G1201000.v1.1 MD11G1116900.v1.1 MD11G1117000.v1.1 MD11G1275900.v1.1 MD13G1109500.v1.1 MD14G1011700.v1.1 MD14G1015400.v1.1 MD14G1015500.v1.1
prunus_persica Prupe.4G140700_v2.0.a1 Prupe.4G140800_v2.0.a1 Prupe.4G141500_v2.0.a1
pyrus_communis pycom02g23390 pycom05g19930 pycom05g19940 pycom05g19970 pycom05g19980 pycom05g19990 pycom05g20000 pycom05g20020 pycom10g17190 pycom10g17200 pycom10g17210 pycom10g17220 pycom10g24650 pycom11g24430 pycom14g01050 pycom14g01330 pycom16g06450
rosa_chinensis RchiOBHm_Chr4g0391831 RchiOBHm_Chr4g0391841 RchiOBHm_Chr4g0407921 RchiOBHm_Chr4g0408021 RchiOBHm_Chr4g0412981 RchiOBHm_Chr4g0415601 RchiOBHm_Chr4g0415621 RchiOBHm_Chr4g0421461 RchiOBHm_Chr4g0431781 RchiOBHm_Chr5g0026651 RchiOBHm_Chr5g0026721 RchiOBHm_Chr5g0026731 RchiOBHm_Chr5g0026741 RchiOBHm_Chr5g0026751 RchiOBHm_Chr5g0026821 RchiOBHm_Chr5g0028341
rosa_laevigata RLG00000006890 RLG00000007680 RLG00000007682 RLG00000008056 RLG00000008057 RLG00000008058 RLG00000008060 RLG00000008681 RLG00000032943 RLG00000032951 RLG00000032955 RLG00000032956 RLG00000032957 RLG00000032958 RLG00000032961 RLG00000033083 RLG00000033084
rosa_multiflora Rmu_co7991326.1_g000001 Rmu_co8439139.1_g000001 Rmu_co8448401.1_g000001 Rmu_sc0001194.1_g000015 Rmu_sc0001962.1_g000015 Rmu_sc0002073.1_g000012 Rmu_sc0004490.1_g000006 Rmu_sc0004599.1_g000009 Rmu_sc0004805.1_g000044 Rmu_sc0008526.1_g000001 Rmu_ssc0000172.1_g000021 Rmu_ssc0000172.1_g000031 Rmu_ssc0000172.1_g000032
rosa_roxburghii Rroxscaffold_1G00051360 Rroxscaffold_1G00051390 Rroxscaffold_1G00052710 Rroxscaffold_1G00052750 Rroxscaffold_1G00052810 Rroxscaffold_1G00052820 Rroxscaffold_4G00321060 Rroxscaffold_4G00321070 Rroxscaffold_5G00352550 Rroxscaffold_5G00359410
rosa_rugosa Rorug01G0079700 Rorug01G0080700 Rorug04G0083200 Rorug04G0083400 Rorug04G0135400 Rorug04G0135500.1 Rorug04G0135900 Rorug04G0171400 Rorug04G0252300 Rorug05G0095200 Rorug05G0095300 Rorug05G0095400 Rorug05G0402400
rosa_samantha Rh1DG103500 Rh4AG176900 Rh4AG196400 Rh4AG232100 Rh4AG308800 Rh4DG141600 Rh4DG194000 Rh4DG194100 Rh4DG194300 Rh4DG230600 Rh5AG177800 Rh5AG188100 Rh5AG188800 Rh5AG188900 Rh5AG199400 Rh5DG187300 Rh5DG187400 Rh5DG188000 Rh5DG199900
rosa_wichuraiana Rw0G018630 Rw1G007730 Rw4G012100 Rw4G016700 Rw4G020190 Rw5G016100 Rw5G017090 Rw5G017100 Rw5G017110 Rw5G018170 Rw5G018180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 846
AccIII TCCGGA 1 cut(s) 1579
AciI CCGC 3 cut(s) 84, 166, 615
AclI AACGTT 1 cut(s) 482
AclWI GGATC 4 cut(s) 930, 1546, 1693, 1706
AcoI YGGCCR 1 cut(s) 409
AcsI RAATTY 3 cut(s) 276, 811, 1518
AcyI GRCGYC 1 cut(s) 847
AdeI CACNNNGTG 1 cut(s) 718
AfiI CCNNNNNNNGG 2 cut(s) 794, 1330
AflIII ACRYGT 1 cut(s) 931
AjiI CACGTC 1 cut(s) 1744
AjnI CCWGG 4 cut(s) 325, 406, 456, 1328
Alw21I GWGCWC 1 cut(s) 1168
Alw26I GTCTC 3 cut(s) 200, 1136, 1297
Alw44I GTGCAC 1 cut(s) 1164
AlwI GGATC 4 cut(s) 930, 1546, 1693, 1706
Ama87I CYCGRG 1 cut(s) 1664
Aor13HI TCCGGA 1 cut(s) 1579
AoxI GGCC 4 cut(s) 358, 409, 506, 1920
ApaLI GTGCAC 1 cut(s) 1164
ApeKI GCWGC 5 cut(s) 80, 466, 896, 1623, 1783
ApoI RAATTY 3 cut(s) 276, 811, 1518
Asp700I GAANNNNTTC 2 cut(s) 744, 1521
AspLEI GCGC 3 cut(s) 849, 888, 1084
AspS9I GGNCC 2 cut(s) 454, 1426
AsuHPI GGTGA 5 cut(s) 120, 536, 704, 1500, 1521
AvaI CYCGRG 1 cut(s) 1664
AvaII GGWCC 2 cut(s) 454, 1426
BaeGI GKGCMC 1 cut(s) 1168
BalI TGGCCA 1 cut(s) 411
BamHI GGATCC 1 cut(s) 1698
BanI GGYRCC 1 cut(s) 846
BauI CACGAG 1 cut(s) 537
BbsI GAAGAC 2 cut(s) 1260, 1326
Bbv12I GWGCWC 1 cut(s) 1168
BbvCI CCTCAGC 1 cut(s) 213
BbvI GCAGC 5 cut(s) 67, 478, 908, 1635, 1795
BccI CCATC 7 cut(s) 53, 330, 935, 1066, 1182, 1309, 1591
BciT130I CCWGG 4 cut(s) 327, 408, 458, 1330
BciVI GTATCC 1 cut(s) 417
BcoDI GTCTC 3 cut(s) 200, 1136, 1297
BfaI CTAG 4 cut(s) 291, 462, 545, 1028
BfmI CTRYAG 1 cut(s) 632
BfoI RGCGCY 2 cut(s) 850, 889
BfuI GTATCC 1 cut(s) 417
BglII AGATCT 1 cut(s) 1195
BisI GCNGC 6 cut(s) 81, 84, 467, 897, 1624, 1784
BlpI GCTNAGC 2 cut(s) 321, 1354
BlsI GCNGC 6 cut(s) 82, 85, 468, 898, 1625, 1785
Bme1390I CCNGG 4 cut(s) 327, 408, 458, 1330
Bme18I GGWCC 2 cut(s) 454, 1426
BmeT110I CYCGRG 1 cut(s) 1664
BmgBI CACGTC 1 cut(s) 1744
BmgT120I GGNCC 2 cut(s) 454, 1426
BmiI GGNNCC 3 cut(s) 848, 1335, 1700
BmrFI CCNGG 4 cut(s) 327, 408, 458, 1330
BmrI ACTGGG 1 cut(s) 1863
BmsI GCATC 1 cut(s) 1371
BmuI ACTGGG 1 cut(s) 1863
BpiI GAAGAC 2 cut(s) 1260, 1326
BplI GAGNNNNNCTC 2 cut(s) 549, 581
BpmI CTGGAG 1 cut(s) 1781
Bpu10I CCTNAGC 1 cut(s) 213
Bpu1102I GCTNAGC 2 cut(s) 321, 1354
BpuEI CTTGAG 1 cut(s) 551
BsaBI GATNNNNATC 1 cut(s) 1703
BsaHI GRCGYC 1 cut(s) 847
BsaJI CCNNGG 4 cut(s) 259, 406, 1329, 1511
BsaWI WCCGGW 1 cut(s) 1579
Bsc4I CCNNNNNNNGG 2 cut(s) 794, 1330
Bse1I ACTGG 4 cut(s) 679, 1454, 1532, 1869
Bse3DI GCAATG 1 cut(s) 1221
Bse8I GATNNNNATC 1 cut(s) 1703
BseAI TCCGGA 1 cut(s) 1579
BseBI CCWGG 4 cut(s) 327, 408, 458, 1330
BseDI CCNNGG 4 cut(s) 259, 406, 1329, 1511
BseGI GGATG 1 cut(s) 45
BseJI GATNNNNATC 1 cut(s) 1703
BseLI CCNNNNNNNGG 2 cut(s) 794, 1330
BseMI GCAATG 1 cut(s) 1221
BseMII CTCAG 9 cut(s) 132, 186, 204, 312, 1059, 1151, 1368, 1373, 1404
BseNI ACTGG 4 cut(s) 679, 1454, 1532, 1869
BseRI GAGGAG 1 cut(s) 1560
BseSI GKGCMC 1 cut(s) 1168
BseXI GCAGC 5 cut(s) 67, 478, 908, 1635, 1795
BsgI GTGCAG 1 cut(s) 140
BshFI GGCC 4 cut(s) 360, 411, 508, 1922
BshNI GGYRCC 1 cut(s) 846
BsiHKAI GWGCWC 1 cut(s) 1168
BsiHKCI CYCGRG 1 cut(s) 1664
BsiSI CCGG 1 cut(s) 1580
BslFI GGGAC 2 cut(s) 810, 862
BslI CCNNNNNNNGG 2 cut(s) 794, 1330
BsmAI GTCTC 3 cut(s) 200, 1136, 1297
BsmFI GGGAC 2 cut(s) 810, 862
BsnI GGCC 4 cut(s) 360, 411, 508, 1922
BsoBI CYCGRG 1 cut(s) 1664
Bsp1286I GDGCHC 1 cut(s) 1168
Bsp13I TCCGGA 1 cut(s) 1579
Bsp143I GATC 8 cut(s) 541, 625, 830, 922, 1195, 1538, 1698, 1800
Bsp1720I GCTNAGC 2 cut(s) 321, 1354
Bsp19I CCATGG 1 cut(s) 259
BspACI CCGC 3 cut(s) 84, 166, 615
BspANI GGCC 4 cut(s) 360, 411, 508, 1922
BspCNI CTCAG 9 cut(s) 131, 187, 205, 313, 1060, 1152, 1367, 1372, 1403
BspEI TCCGGA 1 cut(s) 1579
BspLI GGNNCC 3 cut(s) 848, 1335, 1700
BspPI GGATC 4 cut(s) 930, 1546, 1693, 1706
BspT107I GGYRCC 1 cut(s) 846
BsrDI GCAATG 1 cut(s) 1221
BsrI ACTGG 4 cut(s) 679, 1454, 1532, 1869
BssECI CCNNGG 4 cut(s) 259, 406, 1329, 1511
BssMI GATC 8 cut(s) 541, 625, 830, 922, 1195, 1538, 1698, 1800
BssNI GRCGYC 1 cut(s) 847
BssSI CACGAG 1 cut(s) 537
BssT1I CCWWGG 2 cut(s) 259, 1511
Bst2BI CACGAG 1 cut(s) 537
Bst2UI CCWGG 4 cut(s) 327, 408, 458, 1330
Bst4CI ACNGT 5 cut(s) 513, 729, 1011, 1325, 1813
Bst6I CTCTTC 5 cut(s) 391, 410, 1437, 1473, 1725
BstACI GRCGYC 1 cut(s) 847
BstC8I GCNNGC 5 cut(s) 622, 680, 690, 1147, 1559
BstDSI CCRYGG 1 cut(s) 259
BstEII GGTNACC 1 cut(s) 710
BstF5I GGATG 1 cut(s) 45
BstH2I RGCGCY 2 cut(s) 850, 889
BstHHI GCGC 3 cut(s) 849, 888, 1084
BstKTI GATC 8 cut(s) 544, 628, 833, 925, 1198, 1541, 1701, 1803
BstMAI GTCTC 3 cut(s) 200, 1136, 1297
BstMBI GATC 8 cut(s) 541, 625, 830, 922, 1195, 1538, 1698, 1800
BstMWI GCNNNNNNNGC 2 cut(s) 621, 1088
BstNI CCWGG 4 cut(s) 327, 408, 458, 1330
BstNSI RCATGY 1 cut(s) 935
BstPI GGTNACC 1 cut(s) 710
BstSCI CCNGG 4 cut(s) 325, 406, 456, 1328
BstSFI CTRYAG 1 cut(s) 632
BstSLI GKGCMC 1 cut(s) 1168
BstV1I GCAGC 5 cut(s) 67, 478, 908, 1635, 1795
BstV2I GAAGAC 2 cut(s) 1260, 1326
BstX2I RGATCY 2 cut(s) 1195, 1698
BstYI RGATCY 2 cut(s) 1195, 1698
BsuI GTATCC 1 cut(s) 417
BsuRI GGCC 4 cut(s) 360, 411, 508, 1922
BtgI CCRYGG 1 cut(s) 259
BtgZI GCGATG 1 cut(s) 636
BtrI CACGTC 1 cut(s) 1744
BtsCI GGATG 1 cut(s) 45
BtsIMutI CAGTG 4 cut(s) 192, 294, 1007, 1084
Cac8I GCNNGC 5 cut(s) 622, 680, 690, 1147, 1559
CfoI GCGC 3 cut(s) 849, 888, 1084
Cfr13I GGNCC 2 cut(s) 454, 1426
CviAII CATG 3 cut(s) 260, 640, 932
DinI GGCGCC 1 cut(s) 848
DpnI GATC 8 cut(s) 543, 627, 832, 924, 1197, 1540, 1700, 1802
DpnII GATC 8 cut(s) 541, 625, 830, 922, 1195, 1538, 1698, 1800
DraI TTTAAA 3 cut(s) 1311, 1377, 1917
DraIII CACNNNGTG 1 cut(s) 718
EaeI YGGCCR 1 cut(s) 409
Eam1104I CTCTTC 5 cut(s) 391, 410, 1437, 1473, 1725
EarI CTCTTC 5 cut(s) 391, 410, 1437, 1473, 1725
Eco130I CCWWGG 2 cut(s) 259, 1511
Eco147I AGGCCT 1 cut(s) 1922
Eco47I GGWCC 2 cut(s) 454, 1426
Eco88I CYCGRG 1 cut(s) 1664
Eco91I GGTNACC 1 cut(s) 710
EcoO65I GGTNACC 1 cut(s) 710
EcoRII CCWGG 4 cut(s) 325, 406, 456, 1328
EcoT14I CCWWGG 2 cut(s) 259, 1511
EcoT22I ATGCAT 1 cut(s) 1386
EgeI GGCGCC 1 cut(s) 848
EheI GGCGCC 1 cut(s) 848
ErhI CCWWGG 2 cut(s) 259, 1511
FaeI CATG 3 cut(s) 263, 643, 935
FalI AAGNNNNNCTT 4 cut(s) 1415, 1447, 1434, 1466
FaqI GGGAC 2 cut(s) 810, 862
FatI CATG 3 cut(s) 259, 639, 931
FauNDI CATATG 2 cut(s) 1764, 1885
Fnu4HI GCNGC 6 cut(s) 81, 84, 467, 897, 1624, 1784
FokI GGATG 1 cut(s) 32
Fsp4HI GCNGC 6 cut(s) 81, 84, 467, 897, 1624, 1784
FspBI CTAG 4 cut(s) 291, 462, 545, 1028
GlaI GCGC 3 cut(s) 848, 887, 1083
GluI GCNGC 6 cut(s) 81, 84, 467, 897, 1624, 1784
GsuI CTGGAG 1 cut(s) 1781
HaeII RGCGCY 2 cut(s) 850, 889
HaeIII GGCC 4 cut(s) 360, 411, 508, 1922
HapII CCGG 1 cut(s) 1580
HhaI GCGC 3 cut(s) 849, 888, 1084
Hin1I GRCGYC 1 cut(s) 847
Hin1II CATG 3 cut(s) 263, 643, 935
Hin6I GCGC 3 cut(s) 847, 886, 1082
HinP1I GCGC 3 cut(s) 847, 886, 1082
HincII GTYRAC 2 cut(s) 1776, 1864
HindII GTYRAC 2 cut(s) 1776, 1864
HindIII AAGCTT 1 cut(s) 1937
HpaI GTTAAC 1 cut(s) 1864
HpaII CCGG 1 cut(s) 1580
HphI GGTGA 5 cut(s) 120, 536, 704, 1500, 1521
Hpy166II GTNNAC 8 cut(s) 454, 581, 1166, 1237, 1429, 1776, 1843, 1864
Hpy188I TCNGA 9 cut(s) 137, 551, 990, 1123, 1281, 1302, 1362, 1393, 1420
Hpy8I GTNNAC 8 cut(s) 454, 581, 1166, 1237, 1429, 1776, 1843, 1864
Hpy99I CGWCG 1 cut(s) 1745
HpyAV CCTTC 4 cut(s) 50, 101, 515, 1180
HpyCH4III ACNGT 5 cut(s) 513, 729, 1011, 1325, 1813
HpyCH4IV ACGT 3 cut(s) 246, 482, 1743
HpyF10VI GCNNNNNNNGC 2 cut(s) 621, 1088
HpySE526I ACGT 3 cut(s) 246, 482, 1743
Hsp92I GRCGYC 1 cut(s) 847
Hsp92II CATG 3 cut(s) 263, 643, 935
HspAI GCGC 3 cut(s) 847, 886, 1082
KasI GGCGCC 1 cut(s) 846
Kpn2I TCCGGA 1 cut(s) 1579
KspAI GTTAAC 1 cut(s) 1864
Kzo9I GATC 8 cut(s) 541, 625, 830, 922, 1195, 1538, 1698, 1800
LmnI GCTCC 3 cut(s) 617, 972, 1190
Lsp1109I GCAGC 5 cut(s) 67, 478, 908, 1635, 1795
LweI GCATC 1 cut(s) 1371
MaeI CTAG 4 cut(s) 291, 462, 545, 1028
MaeII ACGT 3 cut(s) 246, 482, 1743
MaeIII GTNAC 8 cut(s) 242, 483, 710, 1011, 1063, 1292, 1566, 1954
MalI GATC 8 cut(s) 543, 627, 832, 924, 1197, 1540, 1700, 1802
MboI GATC 8 cut(s) 541, 625, 830, 922, 1195, 1538, 1698, 1800
MflI RGATCY 2 cut(s) 1195, 1698
MhlI GDGCHC 1 cut(s) 1168
MlsI TGGCCA 1 cut(s) 411
MluNI TGGCCA 1 cut(s) 411
Mly113I GGCGCC 1 cut(s) 847
MlyI GAGTC 6 cut(s) 110, 230, 662, 792, 1409, 1788
MmeI TCCRAC 5 cut(s) 160, 401, 495, 529, 1516
Mox20I TGGCCA 1 cut(s) 411
Mph1103I ATGCAT 1 cut(s) 1386
MroI TCCGGA 1 cut(s) 1579
MroXI GAANNNNTTC 2 cut(s) 744, 1521
MscI TGGCCA 1 cut(s) 411
MseI TTAA 9 cut(s) 600, 947, 1002, 1086, 1310, 1376, 1674, 1863, 1916
Msp20I TGGCCA 1 cut(s) 411
MspA1I CMGCKG 1 cut(s) 615
MspI CCGG 1 cut(s) 1580
MspR9I CCNGG 4 cut(s) 327, 408, 458, 1330
MvaI CCWGG 4 cut(s) 327, 408, 458, 1330
MwoI GCNNNNNNNGC 2 cut(s) 621, 1088
NarI GGCGCC 1 cut(s) 847
NcoI CCATGG 1 cut(s) 259
NdeI CATATG 2 cut(s) 1764, 1885
NdeII GATC 8 cut(s) 541, 625, 830, 922, 1195, 1538, 1698, 1800
NlaIII CATG 3 cut(s) 263, 643, 935
NlaIV GGNNCC 3 cut(s) 848, 1335, 1700
NmeAIII GCCGAG 1 cut(s) 79
NmuCI GTSAC 4 cut(s) 710, 1063, 1292, 1566
NsiI ATGCAT 1 cut(s) 1386
NspI RCATGY 1 cut(s) 935
PceI AGGCCT 1 cut(s) 1922
PciI ACATGT 1 cut(s) 931
PcsI WCGNNNNNNNCGW 1 cut(s) 106
PdmI GAANNNNTTC 2 cut(s) 744, 1521
PfeI GAWTC 4 cut(s) 148, 647, 1370, 1585
PkrI GCNGC 6 cut(s) 82, 85, 468, 898, 1625, 1785
PleI GAGTC 6 cut(s) 110, 229, 662, 792, 1409, 1788
PluTI GGCGCC 1 cut(s) 850
PpsI GAGTC 6 cut(s) 110, 229, 662, 792, 1409, 1788
PscI ACATGT 1 cut(s) 931
Psp1406I AACGTT 1 cut(s) 482
Psp6I CCWGG 4 cut(s) 325, 406, 456, 1328
PspEI GGTNACC 1 cut(s) 710
PspGI CCWGG 4 cut(s) 325, 406, 456, 1328
PspN4I GGNNCC 3 cut(s) 848, 1335, 1700
PspPI GGNCC 2 cut(s) 454, 1426
PsrI GAACNNNNNNTAC 2 cut(s) 798, 830
PsuI RGATCY 2 cut(s) 1195, 1698
SaqAI TTAA 9 cut(s) 600, 947, 1002, 1086, 1310, 1376, 1674, 1863, 1916
SatI GCNGC 6 cut(s) 81, 84, 467, 897, 1624, 1784
Sau3AI GATC 8 cut(s) 541, 625, 830, 922, 1195, 1538, 1698, 1800
Sau96I GGNCC 2 cut(s) 454, 1426
SchI GAGTC 6 cut(s) 110, 230, 662, 792, 1409, 1788
ScrFI CCNGG 4 cut(s) 327, 408, 458, 1330
SduI GDGCHC 1 cut(s) 1168
SfaNI GCATC 1 cut(s) 1371
SfcI CTRYAG 1 cut(s) 632
SfoI GGCGCC 1 cut(s) 848
SinI GGWCC 2 cut(s) 454, 1426
SmlI CTYRAG 1 cut(s) 566
SmoI CTYRAG 1 cut(s) 566
SseBI AGGCCT 1 cut(s) 1922
SsiI CCGC 3 cut(s) 84, 166, 615
SspDI GGCGCC 1 cut(s) 846
SspI AATATT 1 cut(s) 1576
SspMI CTAG 4 cut(s) 291, 462, 545, 1028
StuI AGGCCT 1 cut(s) 1922
StyD4I CCNGG 4 cut(s) 325, 406, 456, 1328
StyI CCWWGG 2 cut(s) 259, 1511
TaaI ACNGT 5 cut(s) 513, 729, 1011, 1325, 1813
TaiI ACGT 3 cut(s) 249, 485, 1746
TaqI TCGA 4 cut(s) 833, 1605, 1740, 1932
TauI GCSGC 1 cut(s) 86
TfiI GAWTC 4 cut(s) 148, 647, 1370, 1585
Tru1I TTAA 9 cut(s) 600, 947, 1002, 1086, 1310, 1376, 1674, 1863, 1916
Tru9I TTAA 9 cut(s) 600, 947, 1002, 1086, 1310, 1376, 1674, 1863, 1916
TscAI CASTG 4 cut(s) 199, 301, 1014, 1084
TseFI GTSAC 4 cut(s) 710, 1063, 1292, 1566
TseI GCWGC 5 cut(s) 80, 466, 896, 1623, 1783
Tsp45I GTSAC 4 cut(s) 710, 1063, 1292, 1566
TspDTI ATGAA 3 cut(s) 639, 1517, 1781
TspGWI ACGGA 1 cut(s) 985
TspRI CASTG 4 cut(s) 199, 301, 1014, 1084
VneI GTGCAC 1 cut(s) 1164
VpaK11BI GGWCC 2 cut(s) 454, 1426
XapI RAATTY 3 cut(s) 276, 811, 1518
XbaI TCTAGA 1 cut(s) 1027
XceI RCATGY 1 cut(s) 935
XmnI GAANNNNTTC 2 cut(s) 744, 1521
XspI CTAG 4 cut(s) 291, 462, 545, 1028
Zsp2I ATGCAT 1 cut(s) 1386
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.