MD14G1015500.v1.1

BAHD acyltransferase At5g47980-like

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
Physical Location & Seq
Forward (+)
1392321 .. 1392720
400 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1015500.v1.1.491

Sequence Viewer

Length: 342 bp
ATGAGGAAAAGCGTCGAGGAATTTAAGGTAAAATATGCCAATGAAATTAGAGGGGAGGAAGTAGTTCAATTCCTGAAGGAGTATAGTGAGCTCCTTCAAAAGGATGATATGGACAACTATATTTGCACCAGTTTGTGCAGGTTTCCCTTCGGCTCGGCCAATTTTGGATGGGGAAAGGCATCATGCATACGCATCCCTTGGAATGAAGATTTCAAAAACAAAATGTTATTGTTGGATGCAAGTGATGGTATTGGCATCGATGCATGCATAACACTGAAAAAAGAAGATATGGTCATGATTGAAACCAACCAGGACCTGCTTGCATATGCTTCTCTGCAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

114

Amino Acids

13.02

Weight (kDa)

4.74

Isoelectric Point (pI)

42.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 12 - 106 6.5e-13 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000200)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G24420 AT1G24420
fragaria_vesca FvH4_3g15900 FvH4_3g15901 FvH4_3g15902 FvH4_3g15903 FvH4_3g15910 FvH4_3g16350 FvH4_3g16950 FvH4_3g17000 FvH4_3g17010 FvH4_3g35170 FvH4_4g17550
malus_domestica MD02G1273000.v1.1 MD03G1110800.v1.1 MD05G1218500.v1.1 MD05G1218600.v1.1 MD05G1218800.v1.1 MD05G1218900.v1.1 MD05G1219000.v1.1 MD09G1267700.v1.1 MD10G1199600.v1.1 MD10G1199700.v1.1 MD10G1200000.v1.1 MD10G1200100.v1.1 MD10G1200300.v1.1 MD10G1201000.v1.1 MD11G1116900.v1.1 MD11G1117000.v1.1 MD11G1275900.v1.1 MD13G1109500.v1.1 MD14G1011700.v1.1 MD14G1015400.v1.1 MD14G1015500.v1.1
prunus_persica Prupe.4G140700_v2.0.a1 Prupe.4G140800_v2.0.a1 Prupe.4G141500_v2.0.a1
pyrus_communis pycom02g23390 pycom05g19930 pycom05g19940 pycom05g19970 pycom05g19980 pycom05g19990 pycom05g20000 pycom05g20020 pycom10g17190 pycom10g17200 pycom10g17210 pycom10g17220 pycom10g24650 pycom11g24430 pycom14g01050 pycom14g01330 pycom16g06450
rosa_chinensis RchiOBHm_Chr4g0391831 RchiOBHm_Chr4g0391841 RchiOBHm_Chr4g0407921 RchiOBHm_Chr4g0408021 RchiOBHm_Chr4g0412981 RchiOBHm_Chr4g0415601 RchiOBHm_Chr4g0415621 RchiOBHm_Chr4g0421461 RchiOBHm_Chr4g0431781 RchiOBHm_Chr5g0026651 RchiOBHm_Chr5g0026721 RchiOBHm_Chr5g0026731 RchiOBHm_Chr5g0026741 RchiOBHm_Chr5g0026751 RchiOBHm_Chr5g0026821 RchiOBHm_Chr5g0028341
rosa_laevigata RLG00000006890 RLG00000007680 RLG00000007682 RLG00000008056 RLG00000008057 RLG00000008058 RLG00000008060 RLG00000008681 RLG00000032943 RLG00000032951 RLG00000032955 RLG00000032956 RLG00000032957 RLG00000032958 RLG00000032961 RLG00000033083 RLG00000033084
rosa_multiflora Rmu_co7991326.1_g000001 Rmu_co8439139.1_g000001 Rmu_co8448401.1_g000001 Rmu_sc0001194.1_g000015 Rmu_sc0001962.1_g000015 Rmu_sc0002073.1_g000012 Rmu_sc0004490.1_g000006 Rmu_sc0004599.1_g000009 Rmu_sc0004805.1_g000044 Rmu_sc0008526.1_g000001 Rmu_ssc0000172.1_g000021 Rmu_ssc0000172.1_g000031 Rmu_ssc0000172.1_g000032
rosa_roxburghii Rroxscaffold_1G00051360 Rroxscaffold_1G00051390 Rroxscaffold_1G00052710 Rroxscaffold_1G00052750 Rroxscaffold_1G00052810 Rroxscaffold_1G00052820 Rroxscaffold_4G00321060 Rroxscaffold_4G00321070 Rroxscaffold_5G00352550 Rroxscaffold_5G00359410
rosa_rugosa Rorug01G0079700 Rorug01G0080700 Rorug04G0083200 Rorug04G0083400 Rorug04G0135400 Rorug04G0135500.1 Rorug04G0135900 Rorug04G0171400 Rorug04G0252300 Rorug05G0095200 Rorug05G0095300 Rorug05G0095400 Rorug05G0402400
rosa_samantha Rh1DG103500 Rh4AG176900 Rh4AG196400 Rh4AG232100 Rh4AG308800 Rh4DG141600 Rh4DG194000 Rh4DG194100 Rh4DG194300 Rh4DG230600 Rh5AG177800 Rh5AG188100 Rh5AG188800 Rh5AG188900 Rh5AG199400 Rh5DG187300 Rh5DG187400 Rh5DG188000 Rh5DG199900
rosa_wichuraiana Rw0G018630 Rw1G007730 Rw4G012100 Rw4G016700 Rw4G020190 Rw5G016100 Rw5G017090 Rw5G017100 Rw5G017110 Rw5G018170 Rw5G018180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 129, 324
AcoI YGGCCR 1 cut(s) 156
AcsI RAATTY 1 cut(s) 20
AcuI CTGAAG 1 cut(s) 95
AfiI CCNNNNNNNGG 1 cut(s) 100
AgsI TTSAA 4 cut(s) 68, 98, 214, 302
AjnI CCWGG 1 cut(s) 309
AluBI AGCT 1 cut(s) 91
AluI AGCT 1 cut(s) 91
Alw21I GWGCWC 1 cut(s) 93
AlwNI CAGNNNCTG 1 cut(s) 316
AoxI GGCC 1 cut(s) 156
ApoI RAATTY 1 cut(s) 20
Asp700I GAANNNNTTC 1 cut(s) 63
AspS9I GGNCC 1 cut(s) 313
AvaII GGWCC 1 cut(s) 313
BanII GRGCYC 1 cut(s) 93
Bbv12I GWGCWC 1 cut(s) 93
BccI CCATC 2 cut(s) 162, 239
BciT130I CCWGG 1 cut(s) 311
BfuAI ACCTGC 2 cut(s) 129, 324
Bme1390I CCNGG 1 cut(s) 311
Bme18I GGWCC 1 cut(s) 313
BmgT120I GGNCC 1 cut(s) 313
BmrFI CCNGG 1 cut(s) 311
BmsI GCATC 5 cut(s) 188, 201, 226, 250, 264
Bsa29I ATCGAT 1 cut(s) 258
BsaJI CCNNGG 1 cut(s) 197
Bsc4I CCNNNNNNNGG 1 cut(s) 100
Bse1I ACTGG 1 cut(s) 129
BseBI CCWGG 1 cut(s) 311
BseCI ATCGAT 1 cut(s) 258
BseDI CCNNGG 1 cut(s) 197
BseGI GGATG 4 cut(s) 109, 173, 192, 241
BseLI CCNNNNNNNGG 1 cut(s) 100
BseNI ACTGG 1 cut(s) 129
BsgI GTGCAG 1 cut(s) 157
BshFI GGCC 1 cut(s) 158
BshVI ATCGAT 1 cut(s) 258
BsiHKAI GWGCWC 1 cut(s) 93
BslI CCNNNNNNNGG 1 cut(s) 100
BsnI GGCC 1 cut(s) 158
Bsp1286I GDGCHC 1 cut(s) 93
BspANI GGCC 1 cut(s) 158
BspDI ATCGAT 1 cut(s) 258
BspHI TCATGA 1 cut(s) 294
BspMI ACCTGC 2 cut(s) 129, 324
BsrI ACTGG 1 cut(s) 129
BssECI CCNNGG 1 cut(s) 197
BssT1I CCWWGG 1 cut(s) 197
Bst2UI CCWGG 1 cut(s) 311
BstC8I GCNNGC 2 cut(s) 265, 321
BstENI CCTNNNNNAGG 1 cut(s) 98
BstF5I GGATG 4 cut(s) 109, 173, 192, 241
BstNI CCWGG 1 cut(s) 311
BstNSI RCATGY 1 cut(s) 267
BstSCI CCNGG 1 cut(s) 309
Bsu15I ATCGAT 1 cut(s) 258
BsuRI GGCC 1 cut(s) 158
BsuTUI ATCGAT 1 cut(s) 258
BtsCI GGATG 4 cut(s) 109, 173, 192, 241
BtsIMutI CAGTG 1 cut(s) 272
BveI ACCTGC 2 cut(s) 129, 324
Cac8I GCNNGC 2 cut(s) 265, 321
CaiI CAGNNNCTG 1 cut(s) 316
CciI TCATGA 1 cut(s) 294
Cfr13I GGNCC 1 cut(s) 313
ClaI ATCGAT 1 cut(s) 258
CviAII CATG 3 cut(s) 183, 264, 295
CviJI RGCY 3 cut(s) 91, 153, 158
CviKI_1 RGCY 3 cut(s) 91, 153, 158
EaeI YGGCCR 1 cut(s) 156
Ecl136II GAGCTC 1 cut(s) 91
Eco130I CCWWGG 1 cut(s) 197
Eco24I GRGCYC 1 cut(s) 93
Eco47I GGWCC 1 cut(s) 313
Eco53kI GAGCTC 1 cut(s) 91
Eco57I CTGAAG 1 cut(s) 95
EcoICRI GAGCTC 1 cut(s) 91
EcoNI CCTNNNNNAGG 1 cut(s) 98
EcoO109I RGGNCCY 1 cut(s) 313
EcoRII CCWGG 1 cut(s) 309
EcoT14I CCWWGG 1 cut(s) 197
EcoT22I ATGCAT 3 cut(s) 188, 265, 269
EcoT38I GRGCYC 1 cut(s) 93
ErhI CCWWGG 1 cut(s) 197
FaeI CATG 3 cut(s) 186, 267, 298
FatI CATG 3 cut(s) 182, 263, 294
FauNDI CATATG 1 cut(s) 325
FokI GGATG 4 cut(s) 116, 179, 180, 248
FriOI GRGCYC 1 cut(s) 93
HaeIII GGCC 1 cut(s) 158
Hin1II CATG 3 cut(s) 186, 267, 298
Hpy188III TCNNGA 2 cut(s) 73, 295
Hpy99I CGWCG 1 cut(s) 17
HpyAV CCTTC 3 cut(s) 70, 104, 157
HpyCH4V TGCA 8 cut(s) 126, 138, 186, 239, 263, 267, 323, 337
Hsp92II CATG 3 cut(s) 186, 267, 298
LmnI GCTCC 1 cut(s) 96
LpnPI CCDG 6 cut(s) 86, 124, 142, 296, 323, 329
LweI GCATC 5 cut(s) 188, 201, 226, 250, 264
MboII GAAGA 2 cut(s) 218, 296
MhlI GDGCHC 1 cut(s) 93
MluCI AATT 4 cut(s) 20, 45, 68, 160
MmeI TCCRAC 1 cut(s) 213
MnlI CCTC 3 cut(s) 10, 44, 49
Mph1103I ATGCAT 3 cut(s) 188, 265, 269
MroXI GAANNNNTTC 1 cut(s) 63
MseI TTAA 1 cut(s) 24
MspR9I CCNGG 1 cut(s) 311
MvaI CCWGG 1 cut(s) 311
NdeI CATATG 1 cut(s) 325
NlaIII CATG 3 cut(s) 186, 267, 298
NmeAIII GCCGAG 1 cut(s) 134
NsiI ATGCAT 3 cut(s) 188, 265, 269
NspI RCATGY 1 cut(s) 267
PaeI GCATGC 1 cut(s) 267
PagI TCATGA 1 cut(s) 294
PdmI GAANNNNTTC 1 cut(s) 63
PpuMI RGGWCCY 1 cut(s) 313
Psp124BI GAGCTC 1 cut(s) 93
Psp5II RGGWCCY 1 cut(s) 313
Psp6I CCWGG 1 cut(s) 309
PspGI CCWGG 1 cut(s) 309
PspPI GGNCC 1 cut(s) 313
PspPPI RGGWCCY 1 cut(s) 313
PstNI CAGNNNCTG 1 cut(s) 316
SacI GAGCTC 1 cut(s) 93
SaqAI TTAA 1 cut(s) 24
Sau96I GGNCC 1 cut(s) 313
ScrFI CCNGG 1 cut(s) 311
SduI GDGCHC 1 cut(s) 93
SetI ASST 4 cut(s) 30, 93, 143, 318
SfaNI GCATC 5 cut(s) 188, 201, 226, 250, 264
SinI GGWCC 1 cut(s) 313
SphI GCATGC 1 cut(s) 267
Sse9I AATT 4 cut(s) 20, 45, 68, 160
SstI GAGCTC 1 cut(s) 93
StyD4I CCNGG 1 cut(s) 309
StyI CCWWGG 1 cut(s) 197
TaqI TCGA 2 cut(s) 15, 258
TasI AATT 4 cut(s) 20, 45, 68, 160
Tru1I TTAA 1 cut(s) 24
Tru9I TTAA 1 cut(s) 24
TscAI CASTG 1 cut(s) 279
TspDTI ATGAA 2 cut(s) 57, 219
TspRI CASTG 1 cut(s) 279
VpaK11BI GGWCC 1 cut(s) 313
XagI CCTNNNNNAGG 1 cut(s) 98
XapI RAATTY 1 cut(s) 20
XceI RCATGY 1 cut(s) 267
XmnI GAANNNNTTC 1 cut(s) 63
Zsp2I ATGCAT 3 cut(s) 188, 265, 269
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.