RLG00000033084

BAHD acyltransferase At5g47980-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Reverse (-)
23098312 .. 23099620
1309 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000033084

Sequence Viewer

Length: 1197 bp
ATGGGATTAGCGGTGAAGATTGAAGTTCTTCACAAAGAAAGAATTACACCATCCTCTCCAACTCCTCACCACCTTAGAATTTTCAGCCTCTCAACTTTTGATCAGTTTTCTCCTGCAATTTATTTCCCTCTAATCCTCTTCTATCCCAACAATAGTGATATTCATGAGGTCAATAATATTCATCCCCAATGTTTGGTTGTTGAAAGAACCAAGCTTCTGAAAAGATCACTATCCGAAACCCTAAGTCGCTTCTACCCCTTTGCAGGAAGAATCCACGATCATGCTTCAGTCTGTTGCAATGACAAGGGAGCTATGTTTCTTGAAGCTCAGTCCAGGCTAACTATCGGATTCAACGTTTCTCATAAGATCATCGATGCCTTCACACTTAGTACATTCCTCAATAGTTGGTCTGCAACTTCCCGTGGTCTGCAACTTCCTCCACATCAATATGTTGCTGCAGCTTCTCGTTTCCCACCACTGGATTTGTTCAAGCCACCGCCACCGTTTGTGAAGATTGCTAAAGAGAGGTGTACAACAAGGAGGTTCTTGTTTGAATCCTCGAAGATTGAATCTCTGAAGGCGGAAGCTGCCGGTGCTGCCGTGCAAAATCCTTCGCGAGTCGAAGTCGTGTCAGCACTGATTTGGAAATGTGCGATGAAAGCATCAACTGCAAACTCGGATTCTGCAAGACCACCATCATCAGCATGGTTGCAGACTGTGAACATGCGGAAAATATTGGGCCAACCATCTGCGGAGAACTTGATGGGGAACCTTTTGGGGTTCTTTGCAGCAATATCTATGAAAGCCGAAGGTGAGGGTGATCTTCAAGGCTTGGTTGCTGCAATGAGGAAGGGGTATAAAGAACTTAAGGTGAAGTATGGTGCTAATGGTGTTGGTGTGGACGATGTAAGTAAACTCCTGAAAGAGTATGGTGAGGTGTTGCAAAGGGATGACATAGAGTGTTATTGCTCCACCAGTTGGTGCAGGTTGCCTTTTTTTGAAACCAATTTCGGATGGGGAAAGCCATTGATGAGTAGTCCGGCAATTGAAGAAATCAAGAATTTAACTACGCTGATGGATACGAGTGATGGACGTGGCATTGAAGCGCGCTTGACTTTGAAAGAAGAAGACATGGCCATATTTGAAAAAAATGAGGAGCTGCTTGCATATGCTTCTCTAAATCCCACTGTCATATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

399

Amino Acids

44.29

Weight (kDa)

8.32

Isoelectric Point (pI)

48.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 6 - 113 1.1e-21 Transferase family
Transferase PF02458 114 - 387 1.2e-40 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000200)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G24420 AT1G24420
fragaria_vesca FvH4_3g15900 FvH4_3g15901 FvH4_3g15902 FvH4_3g15903 FvH4_3g15910 FvH4_3g16350 FvH4_3g16950 FvH4_3g17000 FvH4_3g17010 FvH4_3g35170 FvH4_4g17550
malus_domestica MD02G1273000.v1.1 MD03G1110800.v1.1 MD05G1218500.v1.1 MD05G1218600.v1.1 MD05G1218800.v1.1 MD05G1218900.v1.1 MD05G1219000.v1.1 MD09G1267700.v1.1 MD10G1199600.v1.1 MD10G1199700.v1.1 MD10G1200000.v1.1 MD10G1200100.v1.1 MD10G1200300.v1.1 MD10G1201000.v1.1 MD11G1116900.v1.1 MD11G1117000.v1.1 MD11G1275900.v1.1 MD13G1109500.v1.1 MD14G1011700.v1.1 MD14G1015400.v1.1 MD14G1015500.v1.1
prunus_persica Prupe.4G140700_v2.0.a1 Prupe.4G140800_v2.0.a1 Prupe.4G141500_v2.0.a1
pyrus_communis pycom02g23390 pycom05g19930 pycom05g19940 pycom05g19970 pycom05g19980 pycom05g19990 pycom05g20000 pycom05g20020 pycom10g17190 pycom10g17200 pycom10g17210 pycom10g17220 pycom10g24650 pycom11g24430 pycom14g01050 pycom14g01330 pycom16g06450
rosa_chinensis RchiOBHm_Chr4g0391831 RchiOBHm_Chr4g0391841 RchiOBHm_Chr4g0407921 RchiOBHm_Chr4g0408021 RchiOBHm_Chr4g0412981 RchiOBHm_Chr4g0415601 RchiOBHm_Chr4g0415621 RchiOBHm_Chr4g0421461 RchiOBHm_Chr4g0431781 RchiOBHm_Chr5g0026651 RchiOBHm_Chr5g0026721 RchiOBHm_Chr5g0026731 RchiOBHm_Chr5g0026741 RchiOBHm_Chr5g0026751 RchiOBHm_Chr5g0026821 RchiOBHm_Chr5g0028341
rosa_laevigata RLG00000006890 RLG00000007680 RLG00000007682 RLG00000008056 RLG00000008057 RLG00000008058 RLG00000008060 RLG00000008681 RLG00000032943 RLG00000032951 RLG00000032955 RLG00000032956 RLG00000032957 RLG00000032958 RLG00000032961 RLG00000033083 RLG00000033084
rosa_multiflora Rmu_co7991326.1_g000001 Rmu_co8439139.1_g000001 Rmu_co8448401.1_g000001 Rmu_sc0001194.1_g000015 Rmu_sc0001962.1_g000015 Rmu_sc0002073.1_g000012 Rmu_sc0004490.1_g000006 Rmu_sc0004599.1_g000009 Rmu_sc0004805.1_g000044 Rmu_sc0008526.1_g000001 Rmu_ssc0000172.1_g000021 Rmu_ssc0000172.1_g000031 Rmu_ssc0000172.1_g000032
rosa_roxburghii Rroxscaffold_1G00051360 Rroxscaffold_1G00051390 Rroxscaffold_1G00052710 Rroxscaffold_1G00052750 Rroxscaffold_1G00052810 Rroxscaffold_1G00052820 Rroxscaffold_4G00321060 Rroxscaffold_4G00321070 Rroxscaffold_5G00352550 Rroxscaffold_5G00359410
rosa_rugosa Rorug01G0079700 Rorug01G0080700 Rorug04G0083200 Rorug04G0083400 Rorug04G0135400 Rorug04G0135500.1 Rorug04G0135900 Rorug04G0171400 Rorug04G0252300 Rorug05G0095200 Rorug05G0095300 Rorug05G0095400 Rorug05G0402400
rosa_samantha Rh1DG103500 Rh4AG176900 Rh4AG196400 Rh4AG232100 Rh4AG308800 Rh4DG141600 Rh4DG194000 Rh4DG194100 Rh4DG194300 Rh4DG230600 Rh5AG177800 Rh5AG188100 Rh5AG188800 Rh5AG188900 Rh5AG199400 Rh5DG187300 Rh5DG187400 Rh5DG188000 Rh5DG199900
rosa_wichuraiana Rw0G018630 Rw1G007730 Rw4G012100 Rw4G016700 Rw4G020190 Rw5G016100 Rw5G017090 Rw5G017100 Rw5G017110 Rw5G018170 Rw5G018180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 975
AccB7I CCANNNNNTGG 2 cut(s) 193, 978
AccII CGCG 2 cut(s) 616, 1108
AciI CCGC 5 cut(s) 11, 497, 581, 727, 752
AclI AACGTT 1 cut(s) 354
AcoI YGGCCR 1 cut(s) 1134
AcsI RAATTY 2 cut(s) 78, 1060
AcuI CTGAAG 2 cut(s) 270, 596
AfaI GTAC 2 cut(s) 391, 532
AfiI CCNNNNNNNGG 4 cut(s) 193, 263, 478, 978
AflII CTTAAG 1 cut(s) 866
AjiI CACGTC 1 cut(s) 1094
AjnI CCWGG 1 cut(s) 332
AluBI AGCT 6 cut(s) 214, 311, 326, 461, 587, 1159
AluI AGCT 6 cut(s) 214, 311, 326, 461, 587, 1159
AoxI GGCC 2 cut(s) 739, 1134
ApeKI GCWGC 7 cut(s) 455, 458, 587, 596, 788, 839, 1159
ApoI RAATTY 2 cut(s) 78, 1060
Asp700I GAANNNNTTC 1 cut(s) 27
AspLEI GCGC 2 cut(s) 1108, 1110
AspS9I GGNCC 1 cut(s) 739
AsuHPI GGTGA 6 cut(s) 25, 59, 824, 830, 883, 944
BalI TGGCCA 1 cut(s) 1136
BbsI GAAGAC 1 cut(s) 1134
BbvI GCAGC 7 cut(s) 442, 470, 574, 583, 800, 826, 1146
BccI CCATC 7 cut(s) 58, 703, 754, 757, 1008, 1069, 1082
BceAI ACGGC 1 cut(s) 584
BciT130I CCWGG 1 cut(s) 334
BciVI GTATCC 1 cut(s) 1072
BclI TGATCA 1 cut(s) 100
BfmI CTRYAG 1 cut(s) 456
BfrI CTTAAG 1 cut(s) 866
BfuAI ACCTGC 1 cut(s) 975
BfuI GTATCC 1 cut(s) 1072
BisI GCNGC 7 cut(s) 456, 459, 588, 597, 789, 840, 1160
BlsI GCNGC 7 cut(s) 457, 460, 589, 598, 790, 841, 1161
Bme1390I CCNGG 1 cut(s) 334
BmgBI CACGTC 1 cut(s) 1094
BmgT120I GGNCC 1 cut(s) 739
BmiI GGNNCC 1 cut(s) 770
BmrFI CCNGG 1 cut(s) 334
BmsI GCATC 2 cut(s) 364, 671
BpiI GAAGAC 1 cut(s) 1134
Bsa29I ATCGAT 1 cut(s) 372
BsaBI GATNNNNATC 1 cut(s) 229
BsaJI CCNNGG 1 cut(s) 421
Bsc4I CCNNNNNNNGG 4 cut(s) 193, 263, 478, 978
Bse118I RCCGGY 1 cut(s) 590
Bse1I ACTGG 2 cut(s) 483, 975
Bse3DI GCAATG 2 cut(s) 304, 849
Bse8I GATNNNNATC 1 cut(s) 229
BseBI CCWGG 1 cut(s) 334
BseCI ATCGAT 1 cut(s) 372
BseDI CCNNGG 1 cut(s) 421
BseGI GGATG 4 cut(s) 50, 181, 955, 1019
BseJI GATNNNNATC 1 cut(s) 229
BseLI CCNNNNNNNGG 4 cut(s) 193, 263, 478, 978
BseMI GCAATG 2 cut(s) 304, 849
BseMII CTCAG 1 cut(s) 341
BseNI ACTGG 2 cut(s) 483, 975
BsePI GCGCGC 1 cut(s) 1106
BseRI GAGGAG 2 cut(s) 54, 1169
BseXI GCAGC 7 cut(s) 442, 470, 574, 583, 800, 826, 1146
BsgI GTGCAG 1 cut(s) 1003
Bsh1236I CGCG 2 cut(s) 616, 1108
BshFI GGCC 2 cut(s) 741, 1136
BshVI ATCGAT 1 cut(s) 372
BsiSI CCGG 2 cut(s) 591, 1040
BslI CCNNNNNNNGG 4 cut(s) 193, 263, 478, 978
BsnI GGCC 2 cut(s) 741, 1136
Bsp1407I TGTACA 1 cut(s) 530
Bsp143I GATC 5 cut(s) 100, 224, 277, 366, 820
Bsp68I TCGCGA 1 cut(s) 616
BspACI CCGC 5 cut(s) 11, 497, 581, 727, 752
BspANI GGCC 2 cut(s) 741, 1136
BspCNI CTCAG 1 cut(s) 340
BspDI ATCGAT 1 cut(s) 372
BspFNI CGCG 2 cut(s) 616, 1108
BspHI TCATGA 1 cut(s) 163
BspLI GGNNCC 1 cut(s) 770
BspMAI CTGCAG 1 cut(s) 460
BspMI ACCTGC 1 cut(s) 975
BspTI CTTAAG 1 cut(s) 866
BsrDI GCAATG 2 cut(s) 304, 849
BsrFI RCCGGY 1 cut(s) 590
BsrGI TGTACA 1 cut(s) 530
BsrI ACTGG 2 cut(s) 483, 975
BssAI RCCGGY 1 cut(s) 590
BssECI CCNNGG 1 cut(s) 421
BssHII GCGCGC 1 cut(s) 1106
BssMI GATC 5 cut(s) 100, 224, 277, 366, 820
Bst2UI CCWGG 1 cut(s) 334
Bst4CI ACNGT 3 cut(s) 504, 718, 1189
Bst6I CTCTTC 1 cut(s) 143
BstAFI CTTAAG 1 cut(s) 866
BstAPI GCANNNNNTGC 1 cut(s) 668
BstAUI TGTACA 1 cut(s) 530
BstC8I GCNNGC 2 cut(s) 1108, 1164
BstDEI CTNAG 4 cut(s) 74, 242, 327, 386
BstDSI CCRYGG 1 cut(s) 421
BstF5I GGATG 4 cut(s) 50, 181, 955, 1019
BstFNI CGCG 2 cut(s) 616, 1108
BstHHI GCGC 2 cut(s) 1108, 1110
BstKTI GATC 5 cut(s) 103, 227, 280, 369, 823
BstMBI GATC 5 cut(s) 100, 224, 277, 366, 820
BstMWI GCNNNNNNNGC 5 cut(s) 587, 593, 596, 659, 668
BstNI CCWGG 1 cut(s) 334
BstNSI RCATGY 1 cut(s) 727
BstSCI CCNGG 1 cut(s) 332
BstSFI CTRYAG 1 cut(s) 456
BstUI CGCG 2 cut(s) 616, 1108
BstV1I GCAGC 7 cut(s) 442, 470, 574, 583, 800, 826, 1146
BstV2I GAAGAC 1 cut(s) 1134
Bsu15I ATCGAT 1 cut(s) 372
BsuI GTATCC 1 cut(s) 1072
BsuRI GGCC 2 cut(s) 741, 1136
BsuTUI ATCGAT 1 cut(s) 372
BtgI CCRYGG 1 cut(s) 421
BtgZI GCGATG 1 cut(s) 668
BtrI CACGTC 1 cut(s) 1094
BtsCI GGATG 4 cut(s) 50, 181, 955, 1019
BtsIMutI CAGTG 3 cut(s) 476, 635, 1185
BtuMI TCGCGA 1 cut(s) 616
BveI ACCTGC 1 cut(s) 975
Cac8I GCNNGC 2 cut(s) 1108, 1164
CciI TCATGA 1 cut(s) 163
CfoI GCGC 2 cut(s) 1108, 1110
Cfr10I RCCGGY 1 cut(s) 590
Cfr13I GGNCC 1 cut(s) 739
ClaI ATCGAT 1 cut(s) 372
Csp6I GTAC 2 cut(s) 390, 531
CspCI CAANNNNNGTGG 2 cut(s) 465, 500
CviAII CATG 5 cut(s) 164, 281, 705, 724, 1132
CviQI GTAC 2 cut(s) 390, 531
DdeI CTNAG 4 cut(s) 74, 242, 327, 386
DpnI GATC 5 cut(s) 102, 226, 279, 368, 822
DpnII GATC 5 cut(s) 100, 224, 277, 366, 820
EaeI YGGCCR 1 cut(s) 1134
Eam1104I CTCTTC 1 cut(s) 143
EarI CTCTTC 1 cut(s) 143
EciI GGCGGA 1 cut(s) 596
Eco57I CTGAAG 2 cut(s) 270, 596
EcoRII CCWGG 1 cut(s) 332
FaeI CATG 5 cut(s) 167, 284, 708, 727, 1135
FatI CATG 5 cut(s) 163, 280, 704, 723, 1131
FauNDI CATATG 1 cut(s) 1168
FbaI TGATCA 1 cut(s) 100
Fnu4HI GCNGC 7 cut(s) 456, 459, 588, 597, 789, 840, 1160
FokI GGATG 4 cut(s) 37, 168, 962, 1026
Fsp4HI GCNGC 7 cut(s) 456, 459, 588, 597, 789, 840, 1160
GlaI GCGC 2 cut(s) 1107, 1109
GluI GCNGC 7 cut(s) 456, 459, 588, 597, 789, 840, 1160
HaeIII GGCC 2 cut(s) 741, 1136
HapII CCGG 2 cut(s) 591, 1040
HhaI GCGC 2 cut(s) 1108, 1110
Hin1II CATG 5 cut(s) 167, 284, 708, 727, 1135
Hin6I GCGC 2 cut(s) 1106, 1108
HinP1I GCGC 2 cut(s) 1106, 1108
HindIII AAGCTT 1 cut(s) 212
HinfI GANTC 6 cut(s) 270, 348, 554, 569, 618, 680
HpaII CCGG 2 cut(s) 591, 1040
HphI GGTGA 6 cut(s) 25, 59, 824, 830, 883, 944
Hpy166II GTNNAC 4 cut(s) 531, 721, 901, 914
Hpy188I TCNGA 6 cut(s) 219, 235, 347, 576, 679, 1013
Hpy188III TCNNGA 5 cut(s) 164, 320, 615, 919, 1057
Hpy8I GTNNAC 4 cut(s) 531, 721, 901, 914
HpyAV CCTTC 5 cut(s) 388, 571, 621, 803, 844
HpyCH4III ACNGT 3 cut(s) 504, 718, 1189
HpyCH4IV ACGT 2 cut(s) 354, 1093
HpyF10VI GCNNNNNNNGC 5 cut(s) 587, 593, 596, 659, 668
HpyF3I CTNAG 4 cut(s) 74, 242, 327, 386
HpySE526I ACGT 2 cut(s) 354, 1093
Hsp92II CATG 5 cut(s) 167, 284, 708, 727, 1135
HspAI GCGC 2 cut(s) 1106, 1108
Ksp22I TGATCA 1 cut(s) 100
Kzo9I GATC 5 cut(s) 100, 224, 277, 366, 820
LmnI GCTCC 3 cut(s) 308, 974, 1156
Lsp1109I GCAGC 7 cut(s) 442, 470, 574, 583, 800, 826, 1146
LweI GCATC 2 cut(s) 364, 671
MaeII ACGT 2 cut(s) 354, 1093
MalI GATC 5 cut(s) 102, 226, 279, 368, 822
MboI GATC 5 cut(s) 100, 224, 277, 366, 820
MfeI CAATTG 1 cut(s) 1044
MlsI TGGCCA 1 cut(s) 1136
MluCI AATT 6 cut(s) 42, 78, 117, 1006, 1044, 1060
MluNI TGGCCA 1 cut(s) 1136
MlyI GAGTC 1 cut(s) 627
MmeI TCCRAC 1 cut(s) 83
Mox20I TGGCCA 1 cut(s) 1136
MroXI GAANNNNTTC 1 cut(s) 27
MscI TGGCCA 1 cut(s) 1136
MseI TTAA 2 cut(s) 867, 1064
MslI CAYNNNNRTG 3 cut(s) 279, 447, 703
Msp20I TGGCCA 1 cut(s) 1136
MspCI CTTAAG 1 cut(s) 866
MspI CCGG 2 cut(s) 591, 1040
MspR9I CCNGG 1 cut(s) 334
MunI CAATTG 1 cut(s) 1044
MvaI CCWGG 1 cut(s) 334
MvnI CGCG 2 cut(s) 616, 1108
MwoI GCNNNNNNNGC 5 cut(s) 587, 593, 596, 659, 668
NdeI CATATG 1 cut(s) 1168
NdeII GATC 5 cut(s) 100, 224, 277, 366, 820
NlaIII CATG 5 cut(s) 167, 284, 708, 727, 1135
NlaIV GGNNCC 1 cut(s) 770
NruI TCGCGA 1 cut(s) 616
NspI RCATGY 1 cut(s) 727
PagI TCATGA 1 cut(s) 163
PauI GCGCGC 1 cut(s) 1106
PcsI WCGNNNNNNNCGW 1 cut(s) 351
PdmI GAANNNNTTC 1 cut(s) 27
PfeI GAWTC 5 cut(s) 270, 348, 554, 569, 680
PflMI CCANNNNNTGG 2 cut(s) 193, 978
PkrI GCNGC 7 cut(s) 457, 460, 589, 598, 790, 841, 1161
PleI GAGTC 1 cut(s) 626
PpsI GAGTC 1 cut(s) 626
Psp1406I AACGTT 1 cut(s) 354
Psp6I CCWGG 1 cut(s) 332
PspGI CCWGG 1 cut(s) 332
PspN4I GGNNCC 1 cut(s) 770
PspPI GGNCC 1 cut(s) 739
PstI CTGCAG 1 cut(s) 460
PteI GCGCGC 1 cut(s) 1106
RruI TCGCGA 1 cut(s) 616
RsaI GTAC 2 cut(s) 391, 532
RsaNI GTAC 2 cut(s) 390, 531
RseI CAYNNNNRTG 3 cut(s) 279, 447, 703
SaqAI TTAA 2 cut(s) 867, 1064
SatI GCNGC 7 cut(s) 456, 459, 588, 597, 789, 840, 1160
Sau3AI GATC 5 cut(s) 100, 224, 277, 366, 820
Sau96I GGNCC 1 cut(s) 739
SchI GAGTC 1 cut(s) 627
ScrFI CCNGG 1 cut(s) 334
SfaNI GCATC 2 cut(s) 364, 671
SfcI CTRYAG 1 cut(s) 456
SmiMI CAYNNNNRTG 3 cut(s) 279, 447, 703
SmlI CTYRAG 1 cut(s) 866
SmoI CTYRAG 1 cut(s) 866
Sse9I AATT 6 cut(s) 42, 78, 117, 1006, 1044, 1060
SsiI CCGC 5 cut(s) 11, 497, 581, 727, 752
SspI AATATT 2 cut(s) 178, 735
StyD4I CCNGG 1 cut(s) 332
TaaI ACNGT 3 cut(s) 504, 718, 1189
TaiI ACGT 2 cut(s) 357, 1096
TaqI TCGA 3 cut(s) 372, 560, 621
TasI AATT 6 cut(s) 42, 78, 117, 1006, 1044, 1060
TatI WGTACW 2 cut(s) 389, 530
TfiI GAWTC 5 cut(s) 270, 348, 554, 569, 680
Tru1I TTAA 2 cut(s) 867, 1064
Tru9I TTAA 2 cut(s) 867, 1064
TscAI CASTG 3 cut(s) 483, 642, 1192
TseI GCWGC 7 cut(s) 455, 458, 587, 596, 788, 839, 1159
TspDTI ATGAA 4 cut(s) 152, 170, 671, 815
TspRI CASTG 3 cut(s) 483, 642, 1192
Van91I CCANNNNNTGG 2 cut(s) 193, 978
Vha464I CTTAAG 1 cut(s) 866
XapI RAATTY 2 cut(s) 78, 1060
XceI RCATGY 1 cut(s) 727
XcmI CCANNNNNNNNNTGG 1 cut(s) 702
XmnI GAANNNNTTC 1 cut(s) 27
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.