MD05G1219000.v1.1

BAHD acyltransferase At5g47980-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
OG0000200
Physical Location & Seq
Reverse (-)
34957502 .. 34958878
1377 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1219000.v1.1.491

Sequence Viewer

Length: 1377 bp
ATGGGGAGCAAGATCATGGCTTCTGACGTGAAGGTCGAAGTCGTTCACAAGGAAACAATTCGTCCATCCTGTTCAACTCCTCCGCACCTCAAAACTACCAATAACCTCTCATTTTTTGATCAGCTTGTTCCTCCAATTCATATCCCACTGCTTCTCTTCTACCCCATCTGCAACAGCGGTGATGATTTTGAGGTCAATGATATCAATCACCGATCTTTGGTTGCGGAAAGATCCAAGCTTCTAAAGACATCTTTATCTGAAGCCCTCACTCTCTTCTATCCCTTTGCAGGAAGTTTCCAGTTTAATGATTCAATCTGTTGCAATGACCAGGGGGCTGTGTTTCTTGAAGCCCAAGTCAACTGTCCCATGTCAAAGATTTTTGACAAACCAGATCTTGGAATGCTAGGGCAATTGCTTCCAAATGATCATACAAGTCATCTTCTACAAGTCCAGGCCAATTTCTTCGAATGCGGTGGATTGGCAATCGGAGTCAATATTTCGCATAAGGTGGCGGATGTTTCCACACTCAGTAAATTCATTAATCGCTGGGCTGCAATTGCACTCGGCTCGCCAAGAACTATTGATGTGGTGCCTCTCGTAGCATTTGGGGCTGCATCTTCTCTTTTCCCACCACTAGATTTCCTAAACTCACCGCCAGCGCCAACTCCAACTAGTGACATGAAATTTGATATTAAAGAAACGTGCACGACAAGGAGATTTGTGTTTGATGGCTCAAAGATTGCTGCTCTCAAGTCCGAAGCTGCCAGTGCCAGCGTGCCAAATCCAACACGAGTTGAAGTAGTGTCCGCACTCATTTGGAAATGTGCAAAGGAAGCGTCAAGATCGAAATTGGGTTCAGTAAGGCCCTCTTCATGGTGTCAAACAGTGAACATGAGGAAAGTACTTGCGCAGACCTTGGCAGATAAAGATTTGCTAGGGAATGTTGTGGGGTTGGTTACATCAAAGACGGAAGAATCTAGCAGTGAAGCACATGATCATGATCTTCGAAGCCTGGTTACTATACTGAGGAAGGGCATTGAGGAATTTAAAGAAAAATATAGAAATGGAGTTAGAGGGGAGGAATTCTGTCAACTTTTCATGGAGAATGTGAACCTCATTATGAAAAAGGATGATACAGACAGCTATAGTTCCACCAGTTGGTGCAGGTTTCCGCTATACGAATCCAATTTTGGTTGGGGAAAGCCATCATGGGTCTTCATTTCTAGTGTTGGTTCCAAGAATTCAACTGTCTTACTGGATGCAAGAGATGGCGATGGAATAGAAGGGTCCTTAACTTTCAACGAAGAAGACATGGCCATATTTGAAAGCAATGAGGAGCTGCTTGAATATGCATCTTTGAATCCATCTGTAATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00940 ko00941 ko00945 ko01100 ko01110 map00940 map00941 map00945 map01100 map01110
Pfam Domains
Protein Families
Transferase

Protein Analysis

459

Amino Acids

50.47

Weight (kDa)

5.41

Isoelectric Point (pI)

41.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 11 - 447 4e-73 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000200)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G24420 AT1G24420
fragaria_vesca FvH4_3g15900 FvH4_3g15901 FvH4_3g15902 FvH4_3g15903 FvH4_3g15910 FvH4_3g16350 FvH4_3g16950 FvH4_3g17000 FvH4_3g17010 FvH4_3g35170 FvH4_4g17550
malus_domestica MD02G1273000.v1.1 MD03G1110800.v1.1 MD05G1218500.v1.1 MD05G1218600.v1.1 MD05G1218800.v1.1 MD05G1218900.v1.1 MD05G1219000.v1.1 MD09G1267700.v1.1 MD10G1199600.v1.1 MD10G1199700.v1.1 MD10G1200000.v1.1 MD10G1200100.v1.1 MD10G1200300.v1.1 MD10G1201000.v1.1 MD11G1116900.v1.1 MD11G1117000.v1.1 MD11G1275900.v1.1 MD13G1109500.v1.1 MD14G1011700.v1.1 MD14G1015400.v1.1 MD14G1015500.v1.1
prunus_persica Prupe.4G140700_v2.0.a1 Prupe.4G140800_v2.0.a1 Prupe.4G141500_v2.0.a1
pyrus_communis pycom02g23390 pycom05g19930 pycom05g19940 pycom05g19970 pycom05g19980 pycom05g19990 pycom05g20000 pycom05g20020 pycom10g17190 pycom10g17200 pycom10g17210 pycom10g17220 pycom10g24650 pycom11g24430 pycom14g01050 pycom14g01330 pycom16g06450
rosa_chinensis RchiOBHm_Chr4g0391831 RchiOBHm_Chr4g0391841 RchiOBHm_Chr4g0407921 RchiOBHm_Chr4g0408021 RchiOBHm_Chr4g0412981 RchiOBHm_Chr4g0415601 RchiOBHm_Chr4g0415621 RchiOBHm_Chr4g0421461 RchiOBHm_Chr4g0431781 RchiOBHm_Chr5g0026651 RchiOBHm_Chr5g0026721 RchiOBHm_Chr5g0026731 RchiOBHm_Chr5g0026741 RchiOBHm_Chr5g0026751 RchiOBHm_Chr5g0026821 RchiOBHm_Chr5g0028341
rosa_laevigata RLG00000006890 RLG00000007680 RLG00000007682 RLG00000008056 RLG00000008057 RLG00000008058 RLG00000008060 RLG00000008681 RLG00000032943 RLG00000032951 RLG00000032955 RLG00000032956 RLG00000032957 RLG00000032958 RLG00000032961 RLG00000033083 RLG00000033084
rosa_multiflora Rmu_co7991326.1_g000001 Rmu_co8439139.1_g000001 Rmu_co8448401.1_g000001 Rmu_sc0001194.1_g000015 Rmu_sc0001962.1_g000015 Rmu_sc0002073.1_g000012 Rmu_sc0004490.1_g000006 Rmu_sc0004599.1_g000009 Rmu_sc0004805.1_g000044 Rmu_sc0008526.1_g000001 Rmu_ssc0000172.1_g000021 Rmu_ssc0000172.1_g000031 Rmu_ssc0000172.1_g000032
rosa_roxburghii Rroxscaffold_1G00051360 Rroxscaffold_1G00051390 Rroxscaffold_1G00052710 Rroxscaffold_1G00052750 Rroxscaffold_1G00052810 Rroxscaffold_1G00052820 Rroxscaffold_4G00321060 Rroxscaffold_4G00321070 Rroxscaffold_5G00352550 Rroxscaffold_5G00359410
rosa_rugosa Rorug01G0079700 Rorug01G0080700 Rorug04G0083200 Rorug04G0083400 Rorug04G0135400 Rorug04G0135500.1 Rorug04G0135900 Rorug04G0171400 Rorug04G0252300 Rorug05G0095200 Rorug05G0095300 Rorug05G0095400 Rorug05G0402400
rosa_samantha Rh1DG103500 Rh4AG176900 Rh4AG196400 Rh4AG232100 Rh4AG308800 Rh4DG141600 Rh4DG194000 Rh4DG194100 Rh4DG194300 Rh4DG230600 Rh5AG177800 Rh5AG188100 Rh5AG188800 Rh5AG188900 Rh5AG199400 Rh5DG187300 Rh5DG187400 Rh5DG188000 Rh5DG199900
rosa_wichuraiana Rw0G018630 Rw1G007730 Rw4G012100 Rw4G016700 Rw4G020190 Rw5G016100 Rw5G017090 Rw5G017100 Rw5G017110 Rw5G018170 Rw5G018180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 32
Acc16I TGCGCA 1 cut(s) 909
Acc36I ACCTGC 1 cut(s) 1155
AccB1I GGYRCC 1 cut(s) 589
AccB7I CCANNNNNTGG 2 cut(s) 395, 1158
AciI CCGC 8 cut(s) 83, 177, 224, 471, 512, 653, 807, 1172
AclWI GGATC 1 cut(s) 225
AcoI YGGCCR 1 cut(s) 1314
AcsI RAATTY 5 cut(s) 533, 683, 1043, 1082, 1240
AcuI CTGAAG 1 cut(s) 279
AfaI GTAC 1 cut(s) 903
AfiI CCNNNNNNNGG 5 cut(s) 217, 287, 395, 873, 1158
AgsI TTSAA 9 cut(s) 75, 312, 347, 797, 1245, 1300, 1325, 1346, 1360
AhlI ACTAGT 1 cut(s) 671
AjiI CACGTC 1 cut(s) 28
AjnI CCWGG 3 cut(s) 327, 450, 1011
AjuI GAANNNNNNNTTGG 2 cut(s) 1173, 1205
AluBI AGCT 5 cut(s) 124, 238, 761, 1143, 1339
AluI AGCT 5 cut(s) 124, 238, 761, 1143, 1339
Alw21I GWGCWC 1 cut(s) 707
Alw44I GTGCAC 1 cut(s) 703
AlwI GGATC 1 cut(s) 225
AoxI GGCC 3 cut(s) 453, 863, 1314
ApaLI GTGCAC 1 cut(s) 703
ApeKI GCWGC 5 cut(s) 551, 611, 743, 761, 1339
ApoI RAATTY 5 cut(s) 533, 683, 1043, 1082, 1240
ArsI GACNNNNNNTTYG 4 cut(s) 668, 700, 821, 853
AseI ATTAAT 1 cut(s) 540
Asp700I GAANNNNTTC 2 cut(s) 42, 57
AspLEI GCGC 2 cut(s) 661, 910
AspS9I GGNCC 2 cut(s) 864, 1287
AsuHPI GGTGA 3 cut(s) 191, 200, 642
AsuII TTCGAA 2 cut(s) 465, 1006
AvaII GGWCC 1 cut(s) 1287
BaeGI GKGCMC 1 cut(s) 707
BalI TGGCCA 1 cut(s) 1316
BanI GGYRCC 1 cut(s) 589
BarI GAAGNNNNNNTAC 2 cut(s) 1000, 1032
BauI CACGAG 1 cut(s) 789
BbsI GAAGAC 2 cut(s) 1207, 1314
Bbv12I GWGCWC 1 cut(s) 707
BbvI GCAGC 5 cut(s) 538, 598, 730, 748, 1326
BccI CCATC 7 cut(s) 73, 173, 722, 1213, 1262, 1268, 1372
BcgI CGANNNNNNTGC 2 cut(s) 549, 583
BciT130I CCWGG 3 cut(s) 329, 452, 1013
BclI TGATCA 3 cut(s) 118, 424, 994
BcuI ACTAGT 1 cut(s) 671
BfaI CTAG 6 cut(s) 404, 635, 672, 935, 978, 1224
BfmI CTRYAG 1 cut(s) 1144
BfoI RGCGCY 1 cut(s) 662
BfuAI ACCTGC 1 cut(s) 1155
BglII AGATCT 1 cut(s) 391
BisI GCNGC 5 cut(s) 552, 612, 744, 762, 1340
BlsI GCNGC 5 cut(s) 553, 613, 745, 763, 1341
BmcAI AGTACT 1 cut(s) 903
Bme1390I CCNGG 3 cut(s) 329, 452, 1013
Bme18I GGWCC 1 cut(s) 1287
BmgBI CACGTC 1 cut(s) 28
BmgT120I GGNCC 2 cut(s) 864, 1287
BmiI GGNNCC 3 cut(s) 591, 1234, 1288
BmrFI CCNGG 3 cut(s) 329, 452, 1013
BmsI GCATC 3 cut(s) 623, 1249, 1361
BpiI GAAGAC 2 cut(s) 1207, 1314
Bpu14I TTCGAA 2 cut(s) 465, 1006
BpuEI CTTGAG 1 cut(s) 734
BsaBI GATNNNNATC 2 cut(s) 204, 999
BsaJI CCNNGG 2 cut(s) 328, 915
Bsc4I CCNNNNNNNGG 5 cut(s) 217, 287, 395, 873, 1158
Bse1I ACTGG 4 cut(s) 298, 765, 1155, 1260
Bse3DI GCAATG 2 cut(s) 328, 1336
Bse8I GATNNNNATC 2 cut(s) 204, 999
BseBI CCWGG 3 cut(s) 329, 452, 1013
BseDI CCNNGG 2 cut(s) 328, 915
BseGI GGATG 4 cut(s) 65, 520, 1135, 1264
BseJI GATNNNNATC 2 cut(s) 204, 999
BseLI CCNNNNNNNGG 5 cut(s) 217, 287, 395, 873, 1158
BseMI GCAATG 2 cut(s) 328, 1336
BseMII CTCAG 2 cut(s) 541, 1016
BseNI ACTGG 4 cut(s) 298, 765, 1155, 1260
BseRI GAGGAG 2 cut(s) 69, 1349
BseSI GKGCMC 1 cut(s) 707
BseXI GCAGC 5 cut(s) 538, 598, 730, 748, 1326
BseYI CCCAGC 1 cut(s) 546
BsgI GTGCAG 1 cut(s) 1183
BshFI GGCC 3 cut(s) 455, 865, 1316
BshNI GGYRCC 1 cut(s) 589
BsiHKAI GWGCWC 1 cut(s) 707
BslFI GGGAC 1 cut(s) 348
BslI CCNNNNNNNGG 5 cut(s) 217, 287, 395, 873, 1158
BsmFI GGGAC 1 cut(s) 348
BsmI GAATGC 2 cut(s) 405, 473
BsnI GGCC 3 cut(s) 455, 865, 1316
Bsp119I TTCGAA 2 cut(s) 465, 1006
Bsp1286I GDGCHC 1 cut(s) 707
Bsp143I GATC 9 cut(s) 12, 118, 212, 230, 391, 424, 842, 994, 1000
BspACI CCGC 8 cut(s) 83, 177, 224, 471, 512, 653, 807, 1172
BspANI GGCC 3 cut(s) 455, 865, 1316
BspCNI CTCAG 2 cut(s) 540, 1017
BspHI TCATGA 1 cut(s) 997
BspLI GGNNCC 3 cut(s) 591, 1234, 1288
BspMI ACCTGC 1 cut(s) 1155
BspPI GGATC 1 cut(s) 225
BspT104I TTCGAA 2 cut(s) 465, 1006
BspT107I GGYRCC 1 cut(s) 589
BsrDI GCAATG 2 cut(s) 328, 1336
BsrI ACTGG 4 cut(s) 298, 765, 1155, 1260
BssECI CCNNGG 2 cut(s) 328, 915
BssMI GATC 9 cut(s) 12, 118, 212, 230, 391, 424, 842, 994, 1000
BssSI CACGAG 1 cut(s) 789
BssT1I CCWWGG 1 cut(s) 915
Bst2BI CACGAG 1 cut(s) 789
Bst2UI CCWGG 3 cut(s) 329, 452, 1013
Bst4CI ACNGT 3 cut(s) 362, 886, 1249
Bst6I CTCTTC 3 cut(s) 161, 278, 874
BstBI TTCGAA 2 cut(s) 465, 1006
BstC8I GCNNGC 4 cut(s) 569, 657, 772, 776
BstDEI CTNAG 2 cut(s) 527, 1025
BstF5I GGATG 4 cut(s) 65, 520, 1135, 1264
BstH2I RGCGCY 1 cut(s) 662
BstHHI GCGC 2 cut(s) 661, 910
BstKTI GATC 9 cut(s) 15, 121, 215, 233, 394, 427, 845, 997, 1003
BstMBI GATC 9 cut(s) 12, 118, 212, 230, 391, 424, 842, 994, 1000
BstMWI GCNNNNNNNGC 4 cut(s) 557, 608, 767, 833
BstNI CCWGG 3 cut(s) 329, 452, 1013
BstSCI CCNGG 3 cut(s) 327, 450, 1011
BstSFI CTRYAG 1 cut(s) 1144
BstSLI GKGCMC 1 cut(s) 707
BstV1I GCAGC 5 cut(s) 538, 598, 730, 748, 1326
BstV2I GAAGAC 2 cut(s) 1207, 1314
BstX2I RGATCY 2 cut(s) 230, 391
BstYI RGATCY 2 cut(s) 230, 391
BsuRI GGCC 3 cut(s) 455, 865, 1316
BtgZI GCGATG 1 cut(s) 1287
BtrI CACGTC 1 cut(s) 28
BtsCI GGATG 4 cut(s) 65, 520, 1135, 1264
BtsI GCAGTG 2 cut(s) 146, 988
BtsIMutI CAGTG 4 cut(s) 146, 772, 891, 988
BveI ACCTGC 1 cut(s) 1155
Cac8I GCNNGC 4 cut(s) 569, 657, 772, 776
CciI TCATGA 1 cut(s) 997
CfoI GCGC 2 cut(s) 661, 910
Cfr13I GGNCC 2 cut(s) 864, 1287
CseI GACGC 1 cut(s) 825
Csp6I GTAC 1 cut(s) 902
CviQI GTAC 1 cut(s) 902
DdeI CTNAG 2 cut(s) 527, 1025
DpnI GATC 9 cut(s) 14, 120, 214, 232, 393, 426, 844, 996, 1002
DpnII GATC 9 cut(s) 12, 118, 212, 230, 391, 424, 842, 994, 1000
DraI TTTAAA 1 cut(s) 1048
DrdI GACNNNNNNGTC 1 cut(s) 32
DseDI GACNNNNNNGTC 1 cut(s) 32
EaeI YGGCCR 1 cut(s) 1314
Eam1104I CTCTTC 3 cut(s) 161, 278, 874
EarI CTCTTC 3 cut(s) 161, 278, 874
EciI GGCGGA 1 cut(s) 527
Eco130I CCWWGG 1 cut(s) 915
Eco32I GATATC 1 cut(s) 202
Eco47I GGWCC 1 cut(s) 1287
Eco57I CTGAAG 1 cut(s) 279
EcoO109I RGGNCCY 2 cut(s) 864, 1287
EcoRI GAATTC 2 cut(s) 1082, 1240
EcoRII CCWGG 3 cut(s) 327, 450, 1011
EcoRV GATATC 1 cut(s) 202
EcoT14I CCWWGG 1 cut(s) 915
EcoT22I ATGCAT 1 cut(s) 1354
ErhI CCWWGG 1 cut(s) 915
FalI AAGNNNNNCTT 2 cut(s) 853, 885
FaqI GGGAC 1 cut(s) 348
FbaI TGATCA 3 cut(s) 118, 424, 994
Fnu4HI GCNGC 5 cut(s) 552, 612, 744, 762, 1340
FokI GGATG 4 cut(s) 52, 527, 1142, 1271
Fsp4HI GCNGC 5 cut(s) 552, 612, 744, 762, 1340
FspBI CTAG 6 cut(s) 404, 635, 672, 935, 978, 1224
FspI TGCGCA 1 cut(s) 909
GlaI GCGC 2 cut(s) 660, 909
GluI GCNGC 5 cut(s) 552, 612, 744, 762, 1340
GsaI CCCAGC 1 cut(s) 550
HaeII RGCGCY 1 cut(s) 662
HaeIII GGCC 3 cut(s) 455, 865, 1316
HgaI GACGC 1 cut(s) 825
HhaI GCGC 2 cut(s) 661, 910
Hin6I GCGC 2 cut(s) 659, 908
HinP1I GCGC 2 cut(s) 659, 908
HincII GTYRAC 2 cut(s) 358, 1091
HindII GTYRAC 2 cut(s) 358, 1091
HindIII AAGCTT 1 cut(s) 236
HinfI GANTC 5 cut(s) 308, 489, 974, 1181, 1360
HphI GGTGA 3 cut(s) 191, 200, 642
Hpy166II GTNNAC 6 cut(s) 46, 358, 705, 889, 1091, 1111
Hpy188I TCNGA 4 cut(s) 25, 259, 488, 757
Hpy188III TCNNGA 3 cut(s) 344, 840, 998
Hpy8I GTNNAC 6 cut(s) 46, 358, 705, 889, 1091, 1111
HpyAV CCTTC 3 cut(s) 25, 1024, 1277
HpyCH4III ACNGT 3 cut(s) 362, 886, 1249
HpyCH4IV ACGT 2 cut(s) 27, 701
HpyF10VI GCNNNNNNNGC 4 cut(s) 557, 608, 767, 833
HpyF3I CTNAG 2 cut(s) 527, 1025
HpySE526I ACGT 2 cut(s) 27, 701
HspAI GCGC 2 cut(s) 659, 908
Ksp22I TGATCA 3 cut(s) 118, 424, 994
Kzo9I GATC 9 cut(s) 12, 118, 212, 230, 391, 424, 842, 994, 1000
LmnI GCTCC 2 cut(s) 6, 1336
Lsp1109I GCAGC 5 cut(s) 538, 598, 730, 748, 1326
LweI GCATC 3 cut(s) 623, 1249, 1361
MaeI CTAG 6 cut(s) 404, 635, 672, 935, 978, 1224
MaeII ACGT 2 cut(s) 27, 701
MaeIII GTNAC 3 cut(s) 674, 955, 1015
MalI GATC 9 cut(s) 14, 120, 214, 232, 393, 426, 844, 996, 1002
MboI GATC 9 cut(s) 12, 118, 212, 230, 391, 424, 842, 994, 1000
MfeI CAATTG 2 cut(s) 410, 555
MflI RGATCY 2 cut(s) 230, 391
MhlI GDGCHC 1 cut(s) 707
MlsI TGGCCA 1 cut(s) 1316
MluNI TGGCCA 1 cut(s) 1316
MlyI GAGTC 1 cut(s) 498
MmeI TCCRAC 2 cut(s) 692, 809
Mox20I TGGCCA 1 cut(s) 1316
Mph1103I ATGCAT 1 cut(s) 1354
MroXI GAANNNNTTC 2 cut(s) 42, 57
MscI TGGCCA 1 cut(s) 1316
MseI TTAA 6 cut(s) 303, 540, 693, 1047, 1292, 1375
MslI CAYNNNNRTG 1 cut(s) 996
Msp20I TGGCCA 1 cut(s) 1316
MspA1I CMGCKG 1 cut(s) 177
MspR9I CCNGG 3 cut(s) 329, 452, 1013
MunI CAATTG 2 cut(s) 410, 555
Mva1269I GAATGC 2 cut(s) 405, 473
MvaI CCWGG 3 cut(s) 329, 452, 1013
MwoI GCNNNNNNNGC 4 cut(s) 557, 608, 767, 833
NdeII GATC 9 cut(s) 12, 118, 212, 230, 391, 424, 842, 994, 1000
NlaIV GGNNCC 3 cut(s) 591, 1234, 1288
NmeAIII GCCGAG 1 cut(s) 543
NmuCI GTSAC 1 cut(s) 674
NsbI TGCGCA 1 cut(s) 909
NsiI ATGCAT 1 cut(s) 1354
NspV TTCGAA 2 cut(s) 465, 1006
PagI TCATGA 1 cut(s) 997
PcsI WCGNNNNNNNCGW 1 cut(s) 33
PctI GAATGC 2 cut(s) 405, 473
PdmI GAANNNNTTC 2 cut(s) 42, 57
PfeI GAWTC 4 cut(s) 308, 974, 1181, 1360
PflMI CCANNNNNTGG 2 cut(s) 395, 1158
PkrI GCNGC 5 cut(s) 553, 613, 745, 763, 1341
PleI GAGTC 1 cut(s) 497
PpsI GAGTC 1 cut(s) 497
PpuMI RGGWCCY 1 cut(s) 1287
PshBI ATTAAT 1 cut(s) 540
Psp5II RGGWCCY 1 cut(s) 1287
Psp6I CCWGG 3 cut(s) 327, 450, 1011
PspFI CCCAGC 1 cut(s) 546
PspGI CCWGG 3 cut(s) 327, 450, 1011
PspN4I GGNNCC 3 cut(s) 591, 1234, 1288
PspPI GGNCC 2 cut(s) 864, 1287
PspPPI RGGWCCY 1 cut(s) 1287
PsuI RGATCY 2 cut(s) 230, 391
RsaI GTAC 1 cut(s) 903
RsaNI GTAC 1 cut(s) 902
RseI CAYNNNNRTG 1 cut(s) 996
SaqAI TTAA 6 cut(s) 303, 540, 693, 1047, 1292, 1375
SatI GCNGC 5 cut(s) 552, 612, 744, 762, 1340
Sau3AI GATC 9 cut(s) 12, 118, 212, 230, 391, 424, 842, 994, 1000
Sau96I GGNCC 2 cut(s) 864, 1287
ScaI AGTACT 1 cut(s) 903
SchI GAGTC 1 cut(s) 498
ScrFI CCNGG 3 cut(s) 329, 452, 1013
SduI GDGCHC 1 cut(s) 707
SfaNI GCATC 3 cut(s) 623, 1249, 1361
SfcI CTRYAG 1 cut(s) 1144
SfuI TTCGAA 2 cut(s) 465, 1006
SinI GGWCC 1 cut(s) 1287
SmiMI CAYNNNNRTG 1 cut(s) 996
SmlI CTYRAG 1 cut(s) 749
SmoI CTYRAG 1 cut(s) 749
SpeI ACTAGT 1 cut(s) 671
SsiI CCGC 8 cut(s) 83, 177, 224, 471, 512, 653, 807, 1172
SspI AATATT 1 cut(s) 496
SspMI CTAG 6 cut(s) 404, 635, 672, 935, 978, 1224
StyD4I CCNGG 3 cut(s) 327, 450, 1011
StyI CCWWGG 1 cut(s) 915
TaaI ACNGT 3 cut(s) 362, 886, 1249
TaiI ACGT 2 cut(s) 30, 704
TaqI TCGA 4 cut(s) 36, 465, 845, 1006
TatI WGTACW 1 cut(s) 901
TfiI GAWTC 4 cut(s) 308, 974, 1181, 1360
Tru1I TTAA 6 cut(s) 303, 540, 693, 1047, 1292, 1375
Tru9I TTAA 6 cut(s) 303, 540, 693, 1047, 1292, 1375
TscAI CASTG 4 cut(s) 153, 772, 891, 988
TseFI GTSAC 1 cut(s) 674
TseI GCWGC 5 cut(s) 551, 611, 743, 761, 1339
Tsp45I GTSAC 1 cut(s) 674
TspDTI ATGAA 7 cut(s) 128, 526, 695, 861, 1087, 1136, 1207
TspGWI ACGGA 1 cut(s) 983
TspRI CASTG 4 cut(s) 153, 772, 891, 988
Van91I CCANNNNNTGG 2 cut(s) 395, 1158
VneI GTGCAC 1 cut(s) 703
VpaK11BI GGWCC 1 cut(s) 1287
VspI ATTAAT 1 cut(s) 540
XapI RAATTY 5 cut(s) 533, 683, 1043, 1082, 1240
XmnI GAANNNNTTC 2 cut(s) 42, 57
XspI CTAG 6 cut(s) 404, 635, 672, 935, 978, 1224
ZrmI AGTACT 1 cut(s) 903
Zsp2I ATGCAT 1 cut(s) 1354
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.