RLG00000033083

BAHD acyltransferase At5g47980-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Reverse (-)
23090470 .. 23090978
509 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000033083

Sequence Viewer

Length: 438 bp
ATGAAAGCATCAACTGCAAACTCGGATTCTGCAAGATCACCATCATCAGCATGGTTGCAGACTGTGAACATGCGGAAAATATTGGGGCAACCATCTGCGGAGAACTTGATGGGGAACCTTTTGGGTTTCTTTGCAGCAATATCAACGAAAGGAGAAAGTAAGGGTGATCTTCAAGGGCTGGTTGCTGCAATGAGGAAGGGATGCGAGGAATTTAAGGTCAAGTATGGTACTAATGGTGTTGGTGTACACATGTGGACGATTTGGTGCTGGTTGCCTTTTTATGAAACCAATTTTGGATGGGGAAAGCCATTGACGTTTAATCCTACAATGGTAGAAATCAAGAATTTGGTTGCGTTGAGGGATGCCAGTGATGGACGTGGCATAGAAGCACGCTTGACTTTAAAAGAAGAAGACATGGCCATATTTGAAAAAAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

146

Amino Acids

16.04

Weight (kDa)

8.93

Isoelectric Point (pI)

33.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 83 - 144 2e-10 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000200)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G24420 AT1G24420
fragaria_vesca FvH4_3g15900 FvH4_3g15901 FvH4_3g15902 FvH4_3g15903 FvH4_3g15910 FvH4_3g16350 FvH4_3g16950 FvH4_3g17000 FvH4_3g17010 FvH4_3g35170 FvH4_4g17550
malus_domestica MD02G1273000.v1.1 MD03G1110800.v1.1 MD05G1218500.v1.1 MD05G1218600.v1.1 MD05G1218800.v1.1 MD05G1218900.v1.1 MD05G1219000.v1.1 MD09G1267700.v1.1 MD10G1199600.v1.1 MD10G1199700.v1.1 MD10G1200000.v1.1 MD10G1200100.v1.1 MD10G1200300.v1.1 MD10G1201000.v1.1 MD11G1116900.v1.1 MD11G1117000.v1.1 MD11G1275900.v1.1 MD13G1109500.v1.1 MD14G1011700.v1.1 MD14G1015400.v1.1 MD14G1015500.v1.1
prunus_persica Prupe.4G140700_v2.0.a1 Prupe.4G140800_v2.0.a1 Prupe.4G141500_v2.0.a1
pyrus_communis pycom02g23390 pycom05g19930 pycom05g19940 pycom05g19970 pycom05g19980 pycom05g19990 pycom05g20000 pycom05g20020 pycom10g17190 pycom10g17200 pycom10g17210 pycom10g17220 pycom10g24650 pycom11g24430 pycom14g01050 pycom14g01330 pycom16g06450
rosa_chinensis RchiOBHm_Chr4g0391831 RchiOBHm_Chr4g0391841 RchiOBHm_Chr4g0407921 RchiOBHm_Chr4g0408021 RchiOBHm_Chr4g0412981 RchiOBHm_Chr4g0415601 RchiOBHm_Chr4g0415621 RchiOBHm_Chr4g0421461 RchiOBHm_Chr4g0431781 RchiOBHm_Chr5g0026651 RchiOBHm_Chr5g0026721 RchiOBHm_Chr5g0026731 RchiOBHm_Chr5g0026741 RchiOBHm_Chr5g0026751 RchiOBHm_Chr5g0026821 RchiOBHm_Chr5g0028341
rosa_laevigata RLG00000006890 RLG00000007680 RLG00000007682 RLG00000008056 RLG00000008057 RLG00000008058 RLG00000008060 RLG00000008681 RLG00000032943 RLG00000032951 RLG00000032955 RLG00000032956 RLG00000032957 RLG00000032958 RLG00000032961 RLG00000033083 RLG00000033084
rosa_multiflora Rmu_co7991326.1_g000001 Rmu_co8439139.1_g000001 Rmu_co8448401.1_g000001 Rmu_sc0001194.1_g000015 Rmu_sc0001962.1_g000015 Rmu_sc0002073.1_g000012 Rmu_sc0004490.1_g000006 Rmu_sc0004599.1_g000009 Rmu_sc0004805.1_g000044 Rmu_sc0008526.1_g000001 Rmu_ssc0000172.1_g000021 Rmu_ssc0000172.1_g000031 Rmu_ssc0000172.1_g000032
rosa_roxburghii Rroxscaffold_1G00051360 Rroxscaffold_1G00051390 Rroxscaffold_1G00052710 Rroxscaffold_1G00052750 Rroxscaffold_1G00052810 Rroxscaffold_1G00052820 Rroxscaffold_4G00321060 Rroxscaffold_4G00321070 Rroxscaffold_5G00352550 Rroxscaffold_5G00359410
rosa_rugosa Rorug01G0079700 Rorug01G0080700 Rorug04G0083200 Rorug04G0083400 Rorug04G0135400 Rorug04G0135500.1 Rorug04G0135900 Rorug04G0171400 Rorug04G0252300 Rorug05G0095200 Rorug05G0095300 Rorug05G0095400 Rorug05G0402400
rosa_samantha Rh1DG103500 Rh4AG176900 Rh4AG196400 Rh4AG232100 Rh4AG308800 Rh4DG141600 Rh4DG194000 Rh4DG194100 Rh4DG194300 Rh4DG230600 Rh5AG177800 Rh5AG188100 Rh5AG188800 Rh5AG188900 Rh5AG199400 Rh5DG187300 Rh5DG187400 Rh5DG188000 Rh5DG199900
rosa_wichuraiana Rw0G018630 Rw1G007730 Rw4G012100 Rw4G016700 Rw4G020190 Rw5G016100 Rw5G017090 Rw5G017100 Rw5G017110 Rw5G018170 Rw5G018180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 73, 98
AcoI YGGCCR 1 cut(s) 417
AcsI RAATTY 2 cut(s) 209, 343
AfaI GTAC 2 cut(s) 229, 246
AflIII ACRYGT 1 cut(s) 249
AgsI TTSAA 2 cut(s) 173, 428
AjiI CACGTC 1 cut(s) 377
AjuI GAANNNNNNNTTGG 2 cut(s) 276, 308
AoxI GGCC 1 cut(s) 417
ApeKI GCWGC 2 cut(s) 134, 185
ApoI RAATTY 2 cut(s) 209, 343
AsuHPI GGTGA 2 cut(s) 30, 176
BalI TGGCCA 1 cut(s) 419
BbsI GAAGAC 1 cut(s) 417
BbvI GCAGC 2 cut(s) 146, 172
BccI CCATC 5 cut(s) 49, 100, 103, 291, 365
BisI GCNGC 2 cut(s) 135, 186
BlsI GCNGC 2 cut(s) 136, 187
BmgBI CACGTC 1 cut(s) 377
BmiI GGNNCC 1 cut(s) 116
BmsI GCATC 3 cut(s) 17, 191, 352
BpiI GAAGAC 1 cut(s) 417
BsaBI GATNNNNATC 1 cut(s) 40
Bse1I ACTGG 1 cut(s) 366
Bse3DI GCAATG 1 cut(s) 195
Bse8I GATNNNNATC 1 cut(s) 40
BseGI GGATG 3 cut(s) 206, 302, 367
BseJI GATNNNNATC 1 cut(s) 40
BseMI GCAATG 1 cut(s) 195
BseNI ACTGG 1 cut(s) 366
BseXI GCAGC 2 cut(s) 146, 172
BshFI GGCC 1 cut(s) 419
BsnI GGCC 1 cut(s) 419
Bsp1407I TGTACA 1 cut(s) 244
Bsp143I GATC 2 cut(s) 35, 166
BspACI CCGC 2 cut(s) 73, 98
BspANI GGCC 1 cut(s) 419
BspLI GGNNCC 1 cut(s) 116
BsrDI GCAATG 1 cut(s) 195
BsrGI TGTACA 1 cut(s) 244
BsrI ACTGG 1 cut(s) 366
BssMI GATC 2 cut(s) 35, 166
Bst4CI ACNGT 1 cut(s) 64
BstAPI GCANNNNNTGC 1 cut(s) 14
BstAUI TGTACA 1 cut(s) 244
BstC8I GCNNGC 1 cut(s) 391
BstF5I GGATG 3 cut(s) 206, 302, 367
BstKTI GATC 2 cut(s) 38, 169
BstMBI GATC 2 cut(s) 35, 166
BstMWI GCNNNNNNNGC 1 cut(s) 14
BstNSI RCATGY 2 cut(s) 73, 253
BstV1I GCAGC 2 cut(s) 146, 172
BstV2I GAAGAC 1 cut(s) 417
BsuRI GGCC 1 cut(s) 419
BtrI CACGTC 1 cut(s) 377
BtsCI GGATG 3 cut(s) 206, 302, 367
BtsIMutI CAGTG 1 cut(s) 373
Cac8I GCNNGC 1 cut(s) 391
Csp6I GTAC 2 cut(s) 228, 245
CviAII CATG 4 cut(s) 51, 70, 250, 415
CviJI RGCY 3 cut(s) 178, 307, 419
CviKI_1 RGCY 3 cut(s) 178, 307, 419
CviQI GTAC 2 cut(s) 228, 245
DpnI GATC 2 cut(s) 37, 168
DpnII GATC 2 cut(s) 35, 166
DraI TTTAAA 1 cut(s) 402
EaeI YGGCCR 1 cut(s) 417
FaeI CATG 4 cut(s) 54, 73, 253, 418
FaiI YATR 8 cut(s) 52, 71, 225, 251, 282, 383, 416, 422
FatI CATG 4 cut(s) 50, 69, 249, 414
Fnu4HI GCNGC 2 cut(s) 135, 186
FokI GGATG 3 cut(s) 213, 309, 374
Fsp4HI GCNGC 2 cut(s) 135, 186
GluI GCNGC 2 cut(s) 135, 186
HaeIII GGCC 1 cut(s) 419
Hin1II CATG 4 cut(s) 54, 73, 253, 418
HinfI GANTC 1 cut(s) 26
HphI GGTGA 2 cut(s) 30, 176
Hpy166II GTNNAC 4 cut(s) 67, 245, 247, 255
Hpy188I TCNGA 1 cut(s) 25
Hpy188III TCNNGA 1 cut(s) 340
Hpy8I GTNNAC 4 cut(s) 67, 245, 247, 255
HpyAV CCTTC 1 cut(s) 190
HpyCH4III ACNGT 1 cut(s) 64
HpyCH4IV ACGT 2 cut(s) 314, 376
HpyCH4V TGCA 5 cut(s) 17, 32, 58, 134, 188
HpyF10VI GCNNNNNNNGC 1 cut(s) 14
HpySE526I ACGT 2 cut(s) 314, 376
Hsp92II CATG 4 cut(s) 54, 73, 253, 418
Kzo9I GATC 2 cut(s) 35, 166
LpnPI CCDG 3 cut(s) 164, 253, 379
Lsp1109I GCAGC 2 cut(s) 146, 172
LweI GCATC 3 cut(s) 17, 191, 352
MaeII ACGT 2 cut(s) 314, 376
MalI GATC 2 cut(s) 37, 168
MboI GATC 2 cut(s) 35, 166
MboII GAAGA 3 cut(s) 161, 419, 422
MlsI TGGCCA 1 cut(s) 419
MluCI AATT 3 cut(s) 209, 289, 343
MluNI TGGCCA 1 cut(s) 419
MnlI CCTC 3 cut(s) 186, 199, 351
Mox20I TGGCCA 1 cut(s) 419
MscI TGGCCA 1 cut(s) 419
MseI TTAA 3 cut(s) 213, 318, 401
MslI CAYNNNNRTG 1 cut(s) 49
Msp20I TGGCCA 1 cut(s) 419
MwoI GCNNNNNNNGC 1 cut(s) 14
NdeII GATC 2 cut(s) 35, 166
NlaIII CATG 4 cut(s) 54, 73, 253, 418
NlaIV GGNNCC 1 cut(s) 116
NspI RCATGY 2 cut(s) 73, 253
PciI ACATGT 1 cut(s) 249
PfeI GAWTC 1 cut(s) 26
PkrI GCNGC 2 cut(s) 136, 187
PscI ACATGT 1 cut(s) 249
PspN4I GGNNCC 1 cut(s) 116
RsaI GTAC 2 cut(s) 229, 246
RsaNI GTAC 2 cut(s) 228, 245
RseI CAYNNNNRTG 1 cut(s) 49
SaqAI TTAA 3 cut(s) 213, 318, 401
SatI GCNGC 2 cut(s) 135, 186
Sau3AI GATC 2 cut(s) 35, 166
SetI ASST 4 cut(s) 120, 219, 317, 379
SfaNI GCATC 3 cut(s) 17, 191, 352
SmiMI CAYNNNNRTG 1 cut(s) 49
Sse9I AATT 3 cut(s) 209, 289, 343
SsiI CCGC 2 cut(s) 73, 98
SspI AATATT 1 cut(s) 81
TaaI ACNGT 1 cut(s) 64
TaiI ACGT 2 cut(s) 317, 379
TasI AATT 3 cut(s) 209, 289, 343
TatI WGTACW 1 cut(s) 244
TfiI GAWTC 1 cut(s) 26
Tru1I TTAA 3 cut(s) 213, 318, 401
Tru9I TTAA 3 cut(s) 213, 318, 401
TscAI CASTG 1 cut(s) 373
TseI GCWGC 2 cut(s) 134, 185
TspDTI ATGAA 2 cut(s) 17, 297
TspRI CASTG 1 cut(s) 373
XapI RAATTY 2 cut(s) 209, 343
XceI RCATGY 2 cut(s) 73, 253
XcmI CCANNNNNNNNNTGG 1 cut(s) 48
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.