MD14G1011700.v1.1

BAHD acyltransferase At5g47980-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
OG0000200
Physical Location & Seq
Forward (+)
1111980 .. 1113303
1324 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1011700.v1.1.491

Sequence Viewer

Length: 1302 bp
ATGATCAAGGTTGAAGTAATTCACAAAGAAATTATTAAACCATCCTCCCCAACCCCTCACCACCTTAGACATTTGGGTCTCTCCCTTTTTGACCAGTTTATACTTGAACTGTACATGCCACAAGTTCTCTTCTATCCTAGCAGCAGTGATGAACATTCTTTGGTTGCTGAAAAATCCGAGCTTCTAAAGAAATCATTATCTGAGGCCCTCACTGTCTTCTACCCTTTTGCAGGGGAATTCAAATATAACGTTTCCATCAACTGCGATGACCGCGGAGCTCTATTTCTTGAAGCCCGAGTCAACTGTCCCATGTCCAAGATCCTGGACAAACCCGATTCTGAGATCCTGAGACAGCTGATTGCAGCTCCTATGCGTTCCAAACAAGCACAAGTAGGGCATCTTGTACTAATCCAGGCCAACGTATTCGAATGTGGTGGATTGGCAATTGGCGTCAGCATTTCTCATAAGGTCGCCGATGCCGTAGTGTACAGCAAATTCATCGAAAGCTGGGCTGAAATTGCCCGCTGCACTGCCAGCACTACTGACCATCACGTAGTACTTCCTACAGAATTTGGTGTCGCAGCTACTTTGTTCCCACCACAAGAATTTTTTAACTCACCGAAGACCCCACTCACGCTACCTTTTATTGACAATGTTATCGGAAGGAGGCTTGTGTTTGATGCCTCAAAGATTGCTGCTCTCAAGGCCAAAGCTGCCAGTGCCACAGTGCCAAATCCGACTCGAGTTGAAGCAGTTTCCGCGCTCATTTGGAAATCCGCAACGGAAGCATCAAGATCCAACTTGGGTTTTGCAAGGCCATCCACATGGCGGTCCGCTGTGAACCTGAGGAAAATATTGGCTCAGCCCTTCGCAGAAAACTTACAGGGAAATTTTGTGTATTTTACCATGCCGAAGATTGAAGAACATGAAGTATATGATCTTCAAACCTTGGTTGCAAAAATGAGGAAAAGCGTTGAGGAACTTAAGGTAAAATATGCCAAAGAAATTAGAGGGGAGGAAGTAGTTCAATTCCTGAAGGAGTATAGTGAGCTCGTTCAAAAGGATGATATGGACAACTATTTTTGCACCAGTTTGTGTGGGTTTCCTTTCGGCTCGGCCAATTTTGGATGGGGAAAGGCATCATGCATACGTATCCCTTGGAATGAAGATTTCAAAAACAGAATGTTATTGTTGGATGCAAGTGATGGCATTGGCATCGATGCATACATAACACTGAAAAAAGAAGATATGGTCATGATTGAAACCAACCAGGACCTGCTTGCATATGCTTCTCTGCATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00940 ko00941 ko00945 ko01100 ko01110 map00940 map00941 map00945 map01100 map01110
Pfam Domains
Protein Families
Transferase

Protein Analysis

434

Amino Acids

48.51

Weight (kDa)

6.29

Isoelectric Point (pI)

48.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 3 - 426 4.2e-76 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000200)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G24420 AT1G24420
fragaria_vesca FvH4_3g15900 FvH4_3g15901 FvH4_3g15902 FvH4_3g15903 FvH4_3g15910 FvH4_3g16350 FvH4_3g16950 FvH4_3g17000 FvH4_3g17010 FvH4_3g35170 FvH4_4g17550
malus_domestica MD02G1273000.v1.1 MD03G1110800.v1.1 MD05G1218500.v1.1 MD05G1218600.v1.1 MD05G1218800.v1.1 MD05G1218900.v1.1 MD05G1219000.v1.1 MD09G1267700.v1.1 MD10G1199600.v1.1 MD10G1199700.v1.1 MD10G1200000.v1.1 MD10G1200100.v1.1 MD10G1200300.v1.1 MD10G1201000.v1.1 MD11G1116900.v1.1 MD11G1117000.v1.1 MD11G1275900.v1.1 MD13G1109500.v1.1 MD14G1011700.v1.1 MD14G1015400.v1.1 MD14G1015500.v1.1
prunus_persica Prupe.4G140700_v2.0.a1 Prupe.4G140800_v2.0.a1 Prupe.4G141500_v2.0.a1
pyrus_communis pycom02g23390 pycom05g19930 pycom05g19940 pycom05g19970 pycom05g19980 pycom05g19990 pycom05g20000 pycom05g20020 pycom10g17190 pycom10g17200 pycom10g17210 pycom10g17220 pycom10g24650 pycom11g24430 pycom14g01050 pycom14g01330 pycom16g06450
rosa_chinensis RchiOBHm_Chr4g0391831 RchiOBHm_Chr4g0391841 RchiOBHm_Chr4g0407921 RchiOBHm_Chr4g0408021 RchiOBHm_Chr4g0412981 RchiOBHm_Chr4g0415601 RchiOBHm_Chr4g0415621 RchiOBHm_Chr4g0421461 RchiOBHm_Chr4g0431781 RchiOBHm_Chr5g0026651 RchiOBHm_Chr5g0026721 RchiOBHm_Chr5g0026731 RchiOBHm_Chr5g0026741 RchiOBHm_Chr5g0026751 RchiOBHm_Chr5g0026821 RchiOBHm_Chr5g0028341
rosa_laevigata RLG00000006890 RLG00000007680 RLG00000007682 RLG00000008056 RLG00000008057 RLG00000008058 RLG00000008060 RLG00000008681 RLG00000032943 RLG00000032951 RLG00000032955 RLG00000032956 RLG00000032957 RLG00000032958 RLG00000032961 RLG00000033083 RLG00000033084
rosa_multiflora Rmu_co7991326.1_g000001 Rmu_co8439139.1_g000001 Rmu_co8448401.1_g000001 Rmu_sc0001194.1_g000015 Rmu_sc0001962.1_g000015 Rmu_sc0002073.1_g000012 Rmu_sc0004490.1_g000006 Rmu_sc0004599.1_g000009 Rmu_sc0004805.1_g000044 Rmu_sc0008526.1_g000001 Rmu_ssc0000172.1_g000021 Rmu_ssc0000172.1_g000031 Rmu_ssc0000172.1_g000032
rosa_roxburghii Rroxscaffold_1G00051360 Rroxscaffold_1G00051390 Rroxscaffold_1G00052710 Rroxscaffold_1G00052750 Rroxscaffold_1G00052810 Rroxscaffold_1G00052820 Rroxscaffold_4G00321060 Rroxscaffold_4G00321070 Rroxscaffold_5G00352550 Rroxscaffold_5G00359410
rosa_rugosa Rorug01G0079700 Rorug01G0080700 Rorug04G0083200 Rorug04G0083400 Rorug04G0135400 Rorug04G0135500.1 Rorug04G0135900 Rorug04G0171400 Rorug04G0252300 Rorug05G0095200 Rorug05G0095300 Rorug05G0095400 Rorug05G0402400
rosa_samantha Rh1DG103500 Rh4AG176900 Rh4AG196400 Rh4AG232100 Rh4AG308800 Rh4DG141600 Rh4DG194000 Rh4DG194100 Rh4DG194300 Rh4DG230600 Rh5AG177800 Rh5AG188100 Rh5AG188800 Rh5AG188900 Rh5AG199400 Rh5DG187300 Rh5DG187400 Rh5DG188000 Rh5DG199900
rosa_wichuraiana Rw0G018630 Rw1G007730 Rw4G012100 Rw4G016700 Rw4G020190 Rw5G016100 Rw5G017090 Rw5G017100 Rw5G017110 Rw5G018170 Rw5G018180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 75
Acc36I ACCTGC 1 cut(s) 1284
AccII CGCG 2 cut(s) 273, 761
AciI CCGC 7 cut(s) 271, 273, 523, 759, 777, 829, 834
AclI AACGTT 1 cut(s) 249
AclWI GGATC 3 cut(s) 313, 337, 789
AcoI YGGCCR 1 cut(s) 1116
AcsI RAATTY 5 cut(s) 236, 494, 569, 605, 889
AcuI CTGAAG 1 cut(s) 1055
AcyI GRCGYC 1 cut(s) 450
AfaI GTAC 4 cut(s) 113, 405, 488, 558
AfiI CCNNNNNNNGG 2 cut(s) 230, 828
AflII CTTAAG 1 cut(s) 983
AjnI CCWGG 3 cut(s) 321, 411, 1269
AluBI AGCT 8 cut(s) 181, 278, 355, 365, 507, 584, 713, 1051
AluI AGCT 8 cut(s) 181, 278, 355, 365, 507, 584, 713, 1051
Alw21I GWGCWC 2 cut(s) 280, 1053
Alw26I GTCTC 2 cut(s) 83, 343
AlwI GGATC 3 cut(s) 313, 337, 789
AlwNI CAGNNNCTG 1 cut(s) 1276
Ama87I CYCGRG 2 cut(s) 294, 741
AoxI GGCC 5 cut(s) 204, 414, 705, 815, 1116
ApeKI GCWGC 6 cut(s) 141, 362, 525, 581, 695, 713
ApoI RAATTY 5 cut(s) 236, 494, 569, 605, 889
Asp700I GAANNNNTTC 2 cut(s) 18, 1023
AspLEI GCGC 1 cut(s) 763
AspS9I GGNCC 3 cut(s) 205, 831, 1273
AsuHPI GGTGA 2 cut(s) 50, 609
AsuII TTCGAA 1 cut(s) 426
AvaI CYCGRG 2 cut(s) 294, 741
AvaII GGWCC 2 cut(s) 831, 1273
AxyI CCTNAGG 1 cut(s) 845
BanII GRGCYC 2 cut(s) 280, 1053
BarI GAAGNNNNNNTAC 2 cut(s) 924, 956
BbsI GAAGAC 2 cut(s) 208, 629
Bbv12I GWGCWC 2 cut(s) 280, 1053
BbvI GCAGC 6 cut(s) 153, 374, 512, 593, 682, 700
BccI CCATC 6 cut(s) 49, 263, 555, 826, 1122, 1199
BceAI ACGGC 1 cut(s) 464
BcgI CGANNNNNNTGC 4 cut(s) 481, 515, 1198, 1232
BciT130I CCWGG 3 cut(s) 323, 413, 1271
BciVI GTATCC 1 cut(s) 1163
BclI TGATCA 1 cut(s) 3
BcoDI GTCTC 2 cut(s) 83, 343
BfaI CTAG 1 cut(s) 138
BfmI CTRYAG 1 cut(s) 564
BfrI CTTAAG 1 cut(s) 983
BfuAI ACCTGC 1 cut(s) 1284
BfuI GTATCC 1 cut(s) 1163
BisI GCNGC 6 cut(s) 142, 363, 526, 582, 696, 714
BlpI GCTNAGC 1 cut(s) 861
BlsI GCNGC 6 cut(s) 143, 364, 527, 583, 697, 715
BmcAI AGTACT 1 cut(s) 558
Bme1390I CCNGG 3 cut(s) 323, 413, 1271
Bme18I GGWCC 2 cut(s) 831, 1273
BmeT110I CYCGRG 2 cut(s) 294, 741
BmgT120I GGNCC 3 cut(s) 205, 831, 1273
BmrFI CCNGG 3 cut(s) 323, 413, 1271
BmsI GCATC 8 cut(s) 406, 466, 670, 797, 1148, 1186, 1210, 1224
BpiI GAAGAC 2 cut(s) 208, 629
Bpu1102I GCTNAGC 1 cut(s) 861
Bpu14I TTCGAA 1 cut(s) 426
BpuEI CTTGAG 1 cut(s) 686
Bsa29I ATCGAT 1 cut(s) 1218
BsaAI YACGTR 2 cut(s) 553, 1151
BsaHI GRCGYC 1 cut(s) 450
BsaI GGTCTC 1 cut(s) 83
BsaJI CCNNGG 3 cut(s) 271, 948, 1157
Bsc4I CCNNNNNNNGG 2 cut(s) 230, 828
Bse1I ACTGG 3 cut(s) 94, 717, 1089
Bse21I CCTNAGG 1 cut(s) 845
BseBI CCWGG 3 cut(s) 323, 413, 1271
BseCI ATCGAT 1 cut(s) 1218
BseDI CCNNGG 3 cut(s) 271, 948, 1157
BseGI GGATG 5 cut(s) 41, 818, 1069, 1133, 1201
BseLI CCNNNNNNNGG 2 cut(s) 230, 828
BseMII CTCAG 5 cut(s) 192, 330, 338, 836, 875
BseNI ACTGG 3 cut(s) 94, 717, 1089
BseXI GCAGC 6 cut(s) 153, 374, 512, 593, 682, 700
BseYI CCCAGC 1 cut(s) 507
BsgI GTGCAG 1 cut(s) 511
Bsh1236I CGCG 2 cut(s) 273, 761
BshFI GGCC 5 cut(s) 206, 416, 707, 817, 1118
BshVI ATCGAT 1 cut(s) 1218
BsiHKAI GWGCWC 2 cut(s) 280, 1053
BsiHKCI CYCGRG 2 cut(s) 294, 741
BslFI GGGAC 1 cut(s) 291
BslI CCNNNNNNNGG 2 cut(s) 230, 828
BsmAI GTCTC 2 cut(s) 83, 343
BsmFI GGGAC 1 cut(s) 291
BsnI GGCC 5 cut(s) 206, 416, 707, 817, 1118
Bso31I GGTCTC 1 cut(s) 83
BsoBI CYCGRG 2 cut(s) 294, 741
Bsp119I TTCGAA 1 cut(s) 426
Bsp1286I GDGCHC 2 cut(s) 280, 1053
Bsp1407I TGTACA 2 cut(s) 111, 486
Bsp143I GATC 5 cut(s) 3, 318, 342, 794, 937
Bsp1720I GCTNAGC 1 cut(s) 861
BspACI CCGC 7 cut(s) 271, 273, 523, 759, 777, 829, 834
BspANI GGCC 5 cut(s) 206, 416, 707, 817, 1118
BspCNI CTCAG 5 cut(s) 193, 331, 339, 837, 874
BspDI ATCGAT 1 cut(s) 1218
BspFNI CGCG 2 cut(s) 273, 761
BspHI TCATGA 1 cut(s) 1254
BspMI ACCTGC 1 cut(s) 1284
BspPI GGATC 3 cut(s) 313, 337, 789
BspT104I TTCGAA 1 cut(s) 426
BspTI CTTAAG 1 cut(s) 983
BspTNI GGTCTC 1 cut(s) 83
BsrGI TGTACA 2 cut(s) 111, 486
BsrI ACTGG 3 cut(s) 94, 717, 1089
BssECI CCNNGG 3 cut(s) 271, 948, 1157
BssMI GATC 5 cut(s) 3, 318, 342, 794, 937
BssNI GRCGYC 1 cut(s) 450
BssT1I CCWWGG 2 cut(s) 948, 1157
Bst2UI CCWGG 3 cut(s) 323, 413, 1271
Bst4CI ACNGT 4 cut(s) 111, 214, 305, 727
Bst6I CTCTTC 1 cut(s) 134
BstACI GRCGYC 1 cut(s) 450
BstAFI CTTAAG 1 cut(s) 983
BstAUI TGTACA 2 cut(s) 111, 486
BstBAI YACGTR 2 cut(s) 553, 1151
BstBI TTCGAA 1 cut(s) 426
BstC8I GCNNGC 3 cut(s) 523, 535, 1281
BstDEI CTNAG 6 cut(s) 65, 201, 339, 347, 845, 861
BstDSI CCRYGG 1 cut(s) 271
BstENI CCTNNNNNAGG 1 cut(s) 228
BstF5I GGATG 5 cut(s) 41, 818, 1069, 1133, 1201
BstFNI CGCG 2 cut(s) 273, 761
BstHHI GCGC 1 cut(s) 763
BstKTI GATC 5 cut(s) 6, 321, 345, 797, 940
BstMAI GTCTC 2 cut(s) 83, 343
BstMBI GATC 5 cut(s) 3, 318, 342, 794, 937
BstMWI GCNNNNNNNGC 8 cut(s) 270, 518, 534, 704, 713, 719, 758, 785
BstNI CCWGG 3 cut(s) 323, 413, 1271
BstNSI RCATGY 1 cut(s) 118
BstSCI CCNGG 3 cut(s) 321, 411, 1269
BstSFI CTRYAG 1 cut(s) 564
BstSNI TACGTA 1 cut(s) 1151
BstUI CGCG 2 cut(s) 273, 761
BstV1I GCAGC 6 cut(s) 153, 374, 512, 593, 682, 700
BstV2I GAAGAC 2 cut(s) 208, 629
BstX2I RGATCY 3 cut(s) 318, 342, 794
BstXI CCANNNNNNTGG 2 cut(s) 322, 825
BstYI RGATCY 3 cut(s) 318, 342, 794
Bsu15I ATCGAT 1 cut(s) 1218
Bsu36I CCTNAGG 1 cut(s) 845
BsuI GTATCC 1 cut(s) 1163
BsuRI GGCC 5 cut(s) 206, 416, 707, 817, 1118
BsuTUI ATCGAT 1 cut(s) 1218
BtgI CCRYGG 1 cut(s) 271
BtgZI GCGATG 1 cut(s) 279
BtsCI GGATG 5 cut(s) 41, 818, 1069, 1133, 1201
BtsI GCAGTG 2 cut(s) 151, 528
BtsIMutI CAGTG 6 cut(s) 151, 210, 528, 724, 732, 1232
BveI ACCTGC 1 cut(s) 1284
Cac8I GCNNGC 3 cut(s) 523, 535, 1281
CaiI CAGNNNCTG 1 cut(s) 1276
CciI TCATGA 1 cut(s) 1254
CfoI GCGC 1 cut(s) 763
Cfr13I GGNCC 3 cut(s) 205, 831, 1273
Cfr42I CCGCGG 1 cut(s) 274
ClaI ATCGAT 1 cut(s) 1218
CpoI CGGWCCG 1 cut(s) 831
CseI GACGC 1 cut(s) 439
Csp6I GTAC 4 cut(s) 112, 404, 487, 557
CspI CGGWCCG 1 cut(s) 831
CviAII CATG 7 cut(s) 115, 310, 825, 907, 926, 1143, 1255
CviQI GTAC 4 cut(s) 112, 404, 487, 557
DdeI CTNAG 6 cut(s) 65, 201, 339, 347, 845, 861
DpnI GATC 5 cut(s) 5, 320, 344, 796, 939
DpnII GATC 5 cut(s) 3, 318, 342, 794, 937
DrdI GACNNNNNNGTC 1 cut(s) 75
DseDI GACNNNNNNGTC 1 cut(s) 75
EaeI YGGCCR 1 cut(s) 1116
Eam1104I CTCTTC 1 cut(s) 134
EarI CTCTTC 1 cut(s) 134
Ecl136II GAGCTC 2 cut(s) 278, 1051
Eco105I TACGTA 1 cut(s) 1151
Eco130I CCWWGG 2 cut(s) 948, 1157
Eco24I GRGCYC 2 cut(s) 280, 1053
Eco31I GGTCTC 1 cut(s) 83
Eco47I GGWCC 2 cut(s) 831, 1273
Eco53kI GAGCTC 2 cut(s) 278, 1051
Eco57I CTGAAG 1 cut(s) 1055
Eco81I CCTNAGG 1 cut(s) 845
Eco88I CYCGRG 2 cut(s) 294, 741
EcoICRI GAGCTC 2 cut(s) 278, 1051
EcoNI CCTNNNNNAGG 1 cut(s) 228
EcoO109I RGGNCCY 2 cut(s) 205, 1273
EcoRI GAATTC 1 cut(s) 236
EcoRII CCWGG 3 cut(s) 321, 411, 1269
EcoT14I CCWWGG 2 cut(s) 948, 1157
EcoT22I ATGCAT 2 cut(s) 1148, 1225
EcoT38I GRGCYC 2 cut(s) 280, 1053
ErhI CCWWGG 2 cut(s) 948, 1157
FaeI CATG 7 cut(s) 118, 313, 828, 910, 929, 1146, 1258
FaqI GGGAC 1 cut(s) 291
FatI CATG 7 cut(s) 114, 309, 824, 906, 925, 1142, 1254
FauI CCCGC 1 cut(s) 530
FauNDI CATATG 1 cut(s) 1285
FbaI TGATCA 1 cut(s) 3
Fnu4HI GCNGC 6 cut(s) 142, 363, 526, 582, 696, 714
FokI GGATG 5 cut(s) 28, 805, 1076, 1140, 1208
FriOI GRGCYC 2 cut(s) 280, 1053
Fsp4HI GCNGC 6 cut(s) 142, 363, 526, 582, 696, 714
FspBI CTAG 1 cut(s) 138
GlaI GCGC 1 cut(s) 762
GluI GCNGC 6 cut(s) 142, 363, 526, 582, 696, 714
GsaI CCCAGC 1 cut(s) 511
HaeIII GGCC 5 cut(s) 206, 416, 707, 817, 1118
HgaI GACGC 1 cut(s) 439
HhaI GCGC 1 cut(s) 763
Hin1I GRCGYC 1 cut(s) 450
Hin1II CATG 7 cut(s) 118, 313, 828, 910, 929, 1146, 1258
Hin6I GCGC 1 cut(s) 761
HinP1I GCGC 1 cut(s) 761
HincII GTYRAC 1 cut(s) 301
HindII GTYRAC 1 cut(s) 301
HinfI GANTC 3 cut(s) 297, 335, 739
HphI GGTGA 2 cut(s) 50, 609
Hpy166II GTNNAC 3 cut(s) 301, 487, 841
Hpy188I TCNGA 5 cut(s) 178, 202, 340, 662, 738
Hpy188III TCNNGA 5 cut(s) 287, 346, 792, 1033, 1255
Hpy8I GTNNAC 3 cut(s) 301, 487, 841
HpyAV CCTTC 3 cut(s) 657, 877, 1030
HpyCH4III ACNGT 4 cut(s) 111, 214, 305, 727
HpyCH4IV ACGT 4 cut(s) 249, 420, 552, 1150
HpyF10VI GCNNNNNNNGC 8 cut(s) 270, 518, 534, 704, 713, 719, 758, 785
HpyF3I CTNAG 6 cut(s) 65, 201, 339, 347, 845, 861
HpySE526I ACGT 4 cut(s) 249, 420, 552, 1150
Hsp92I GRCGYC 1 cut(s) 450
Hsp92II CATG 7 cut(s) 118, 313, 828, 910, 929, 1146, 1258
HspAI GCGC 1 cut(s) 761
Ksp22I TGATCA 1 cut(s) 3
KspI CCGCGG 1 cut(s) 274
Kzo9I GATC 5 cut(s) 3, 318, 342, 794, 937
LmnI GCTCC 2 cut(s) 275, 370
Lsp1109I GCAGC 6 cut(s) 153, 374, 512, 593, 682, 700
LweI GCATC 8 cut(s) 406, 466, 670, 797, 1148, 1186, 1210, 1224
MaeI CTAG 1 cut(s) 138
MaeII ACGT 4 cut(s) 249, 420, 552, 1150
MalI GATC 5 cut(s) 5, 320, 344, 796, 939
MboI GATC 5 cut(s) 3, 318, 342, 794, 937
MboII GAAGA 8 cut(s) 121, 208, 634, 925, 932, 932, 1178, 1256
MfeI CAATTG 1 cut(s) 444
MflI RGATCY 3 cut(s) 318, 342, 794
MhlI GDGCHC 2 cut(s) 280, 1053
MlyI GAGTC 2 cut(s) 306, 733
MmeI TCCRAC 3 cut(s) 761, 822, 1173
Mph1103I ATGCAT 2 cut(s) 1148, 1225
MroXI GAANNNNTTC 2 cut(s) 18, 1023
MseI TTAA 3 cut(s) 36, 612, 984
MslI CAYNNNNRTG 1 cut(s) 823
MspA1I CMGCKG 4 cut(s) 273, 355, 525, 836
MspCI CTTAAG 1 cut(s) 983
MspR9I CCNGG 3 cut(s) 323, 413, 1271
MunI CAATTG 1 cut(s) 444
MvaI CCWGG 3 cut(s) 323, 413, 1271
MvnI CGCG 2 cut(s) 273, 761
MwoI GCNNNNNNNGC 8 cut(s) 270, 518, 534, 704, 713, 719, 758, 785
NdeI CATATG 1 cut(s) 1285
NdeII GATC 5 cut(s) 3, 318, 342, 794, 937
NlaIII CATG 7 cut(s) 118, 313, 828, 910, 929, 1146, 1258
NmeAIII GCCGAG 1 cut(s) 1094
NsiI ATGCAT 2 cut(s) 1148, 1225
NspI RCATGY 1 cut(s) 118
NspV TTCGAA 1 cut(s) 426
PaeR7I CTCGAG 1 cut(s) 741
PagI TCATGA 1 cut(s) 1254
PcsI WCGNNNNNNNCGW 1 cut(s) 477
PdmI GAANNNNTTC 2 cut(s) 18, 1023
PfeI GAWTC 1 cut(s) 335
PfoI TCCNGGA 1 cut(s) 321
PkrI GCNGC 6 cut(s) 143, 364, 527, 583, 697, 715
PleI GAGTC 2 cut(s) 305, 733
PpsI GAGTC 2 cut(s) 305, 733
Ppu21I YACGTR 2 cut(s) 553, 1151
PpuMI RGGWCCY 1 cut(s) 1273
Psp124BI GAGCTC 2 cut(s) 280, 1053
Psp1406I AACGTT 1 cut(s) 249
Psp5II RGGWCCY 1 cut(s) 1273
Psp6I CCWGG 3 cut(s) 321, 411, 1269
PspFI CCCAGC 1 cut(s) 507
PspGI CCWGG 3 cut(s) 321, 411, 1269
PspPI GGNCC 3 cut(s) 205, 831, 1273
PspPPI RGGWCCY 1 cut(s) 1273
PspXI VCTCGAGB 1 cut(s) 741
PstNI CAGNNNCTG 1 cut(s) 1276
PsuI RGATCY 3 cut(s) 318, 342, 794
PvuII CAGCTG 1 cut(s) 355
RsaI GTAC 4 cut(s) 113, 405, 488, 558
RsaNI GTAC 4 cut(s) 112, 404, 487, 557
RseI CAYNNNNRTG 1 cut(s) 823
Rsr2I CGGWCCG 1 cut(s) 831
RsrII CGGWCCG 1 cut(s) 831
SacI GAGCTC 2 cut(s) 280, 1053
SacII CCGCGG 1 cut(s) 274
SaqAI TTAA 3 cut(s) 36, 612, 984
SatI GCNGC 6 cut(s) 142, 363, 526, 582, 696, 714
Sau3AI GATC 5 cut(s) 3, 318, 342, 794, 937
Sau96I GGNCC 3 cut(s) 205, 831, 1273
ScaI AGTACT 1 cut(s) 558
SchI GAGTC 2 cut(s) 306, 733
ScrFI CCNGG 3 cut(s) 323, 413, 1271
SduI GDGCHC 2 cut(s) 280, 1053
SfaNI GCATC 8 cut(s) 406, 466, 670, 797, 1148, 1186, 1210, 1224
SfcI CTRYAG 1 cut(s) 564
Sfr274I CTCGAG 1 cut(s) 741
Sfr303I CCGCGG 1 cut(s) 274
SfuI TTCGAA 1 cut(s) 426
SgrBI CCGCGG 1 cut(s) 274
SinI GGWCC 2 cut(s) 831, 1273
SlaI CTCGAG 1 cut(s) 741
SmiMI CAYNNNNRTG 1 cut(s) 823
SmlI CTYRAG 3 cut(s) 701, 741, 983
SmoI CTYRAG 3 cut(s) 701, 741, 983
SnaBI TACGTA 1 cut(s) 1151
SsiI CCGC 7 cut(s) 271, 273, 523, 759, 777, 829, 834
SspI AATATT 1 cut(s) 855
SspMI CTAG 1 cut(s) 138
SstI GAGCTC 2 cut(s) 280, 1053
StyD4I CCNGG 3 cut(s) 321, 411, 1269
StyI CCWWGG 2 cut(s) 948, 1157
TaaI ACNGT 4 cut(s) 111, 214, 305, 727
TaiI ACGT 4 cut(s) 252, 423, 555, 1153
TaqI TCGA 4 cut(s) 426, 501, 742, 1218
TatI WGTACW 4 cut(s) 111, 403, 486, 556
TfiI GAWTC 1 cut(s) 335
Tru1I TTAA 3 cut(s) 36, 612, 984
Tru9I TTAA 3 cut(s) 36, 612, 984
TscAI CASTG 6 cut(s) 151, 217, 535, 724, 732, 1239
TseI GCWGC 6 cut(s) 141, 362, 525, 581, 695, 713
TspDTI ATGAA 4 cut(s) 165, 487, 942, 1179
TspGWI ACGGA 1 cut(s) 797
TspRI CASTG 6 cut(s) 151, 217, 535, 724, 732, 1239
Vha464I CTTAAG 1 cut(s) 983
VpaK11BI GGWCC 2 cut(s) 831, 1273
XagI CCTNNNNNAGG 1 cut(s) 228
XapI RAATTY 5 cut(s) 236, 494, 569, 605, 889
XceI RCATGY 1 cut(s) 118
XhoI CTCGAG 1 cut(s) 741
XmnI GAANNNNTTC 2 cut(s) 18, 1023
XspI CTAG 1 cut(s) 138
ZrmI AGTACT 1 cut(s) 558
Zsp2I ATGCAT 2 cut(s) 1148, 1225
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.