MD11G1117000.v1.1

BAHD acyltransferase At5g47980-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0000200
Physical Location & Seq
Forward (+)
10598865 .. 10600250
1386 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1117000.v1.1.491

Sequence Viewer

Length: 1386 bp
ATGGACCAACTCTTTATGAAAATCCTAACTTGTGTGGAGCAAAAGATGGCTTCGGAGATCAAGATTGAAGTGATCCACAAGGAAACAATTAAACCACTCTCTCCAACTCCTGACCACCTTAAAAGCTTGAGCCTCTCTGTTTTTGATCAGTATCAACCTGAAATTTATATCCCACTACTTTTCTTCTATCCCAACAAAAATAACAGCGACGACGGCCAGGTCAAAAATATCGATCATCCTTCTTTGTTTGCCGAAAGATCCAACCTACTAAAGAAATCACTGTCTGAAGCCCTCACTCGATTCTACCCCTTCGCCGGAGAATTTAAATATAATGTTTCAATCAGCTGCAGTGACCGTGGGGCTGCATTTCTTGAAGCCCAAGTGAACTGTCCCGTATCGAGGATTTTGGAAAACCCCGATTTTGAGATCCTAAAACGGTTGCTTCCAACTGATTGTATGTCCACACAAGCTGAGACAGGATATCTTGTGCTAGTCCAGGCCAACTTATTTGAATGTGGCGGATTGGCAATCGGGGTCAGCATTCACCATAAAGCTGCCGATGCTTTTACAGCCGCCACATTCATCAAATGTTGGGCTGCACTCGCTCTTGGCTCGGCCAGTAGTACTACTCACCACGTACTGCTTCCCGAGGAATTCGGTGTTGCAGCTTCTCTTGCCCCATCCCTTGATTCCTTGGACTCACTAGGAGCTCCTGTGACATTTTCTACGGAGAGACACGCGACGAGGAGATTTGTGTTTGATGCTTCGAAAATTTCTGCTCTCAAGTCCAAGGCTGCTAGCGCCACGGTGCCAAACCCAACACGTGTTGAAGTAGCATCGGCAGTCATTTGGAAAAACCTAATACAAGCATCAAGATCGAAGTTTGGTCTTATGAAGCCATCCATGTGGTGTGCAACCGTGAACATGCGCAAAAGATGGGGGCAGGCTGTGACAGAAAACATACGGGGGAATTTCGTGTGGTACGCTGCAGCATTGATCACAGCAGAGAGCGAAGTAGAACTCGAGAGCTTGGTTGGTAAACTCAGGAAGGGGATTGAGGAATATAAGGAAAAGCATCCAAATGGAGTCAGTGGTGAGGAAGTATGTCAAACCGTCAAAAGGTCTGCGGGTCTTTTGTTGAGCGGAGATATAGAAATGTATACTTGCAGCAGCTGGTGCAGGTTTCCGTTGTATGAAACCAATTTCGGATGGGGAAAGCCATCATGGGCAACGTCTCAACCATCCAATGGTTTAATTTGTTTGAGTGACACGAGAGATGGTGATGGCGTAGAAGCGTCCTTGTCATTGAAAGAAGACGTCATGGCCAAAATCGAAAGCAGCGACGACCTGCTCTCGTATGCTTCTATGAATCCGACCGTCGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00940 ko00941 ko00945 ko01100 ko01110 map00940 map00941 map00945 map01100 map01110
Pfam Domains
Protein Families
Transferase

Protein Analysis

462

Amino Acids

50.72

Weight (kDa)

5.92

Isoelectric Point (pI)

45.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 21 - 447 2.4e-76 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000200)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G24420 AT1G24420
fragaria_vesca FvH4_3g15900 FvH4_3g15901 FvH4_3g15902 FvH4_3g15903 FvH4_3g15910 FvH4_3g16350 FvH4_3g16950 FvH4_3g17000 FvH4_3g17010 FvH4_3g35170 FvH4_4g17550
malus_domestica MD02G1273000.v1.1 MD03G1110800.v1.1 MD05G1218500.v1.1 MD05G1218600.v1.1 MD05G1218800.v1.1 MD05G1218900.v1.1 MD05G1219000.v1.1 MD09G1267700.v1.1 MD10G1199600.v1.1 MD10G1199700.v1.1 MD10G1200000.v1.1 MD10G1200100.v1.1 MD10G1200300.v1.1 MD10G1201000.v1.1 MD11G1116900.v1.1 MD11G1117000.v1.1 MD11G1275900.v1.1 MD13G1109500.v1.1 MD14G1011700.v1.1 MD14G1015400.v1.1 MD14G1015500.v1.1
prunus_persica Prupe.4G140700_v2.0.a1 Prupe.4G140800_v2.0.a1 Prupe.4G141500_v2.0.a1
pyrus_communis pycom02g23390 pycom05g19930 pycom05g19940 pycom05g19970 pycom05g19980 pycom05g19990 pycom05g20000 pycom05g20020 pycom10g17190 pycom10g17200 pycom10g17210 pycom10g17220 pycom10g24650 pycom11g24430 pycom14g01050 pycom14g01330 pycom16g06450
rosa_chinensis RchiOBHm_Chr4g0391831 RchiOBHm_Chr4g0391841 RchiOBHm_Chr4g0407921 RchiOBHm_Chr4g0408021 RchiOBHm_Chr4g0412981 RchiOBHm_Chr4g0415601 RchiOBHm_Chr4g0415621 RchiOBHm_Chr4g0421461 RchiOBHm_Chr4g0431781 RchiOBHm_Chr5g0026651 RchiOBHm_Chr5g0026721 RchiOBHm_Chr5g0026731 RchiOBHm_Chr5g0026741 RchiOBHm_Chr5g0026751 RchiOBHm_Chr5g0026821 RchiOBHm_Chr5g0028341
rosa_laevigata RLG00000006890 RLG00000007680 RLG00000007682 RLG00000008056 RLG00000008057 RLG00000008058 RLG00000008060 RLG00000008681 RLG00000032943 RLG00000032951 RLG00000032955 RLG00000032956 RLG00000032957 RLG00000032958 RLG00000032961 RLG00000033083 RLG00000033084
rosa_multiflora Rmu_co7991326.1_g000001 Rmu_co8439139.1_g000001 Rmu_co8448401.1_g000001 Rmu_sc0001194.1_g000015 Rmu_sc0001962.1_g000015 Rmu_sc0002073.1_g000012 Rmu_sc0004490.1_g000006 Rmu_sc0004599.1_g000009 Rmu_sc0004805.1_g000044 Rmu_sc0008526.1_g000001 Rmu_ssc0000172.1_g000021 Rmu_ssc0000172.1_g000031 Rmu_ssc0000172.1_g000032
rosa_roxburghii Rroxscaffold_1G00051360 Rroxscaffold_1G00051390 Rroxscaffold_1G00052710 Rroxscaffold_1G00052750 Rroxscaffold_1G00052810 Rroxscaffold_1G00052820 Rroxscaffold_4G00321060 Rroxscaffold_4G00321070 Rroxscaffold_5G00352550 Rroxscaffold_5G00359410
rosa_rugosa Rorug01G0079700 Rorug01G0080700 Rorug04G0083200 Rorug04G0083400 Rorug04G0135400 Rorug04G0135500.1 Rorug04G0135900 Rorug04G0171400 Rorug04G0252300 Rorug05G0095200 Rorug05G0095300 Rorug05G0095400 Rorug05G0402400
rosa_samantha Rh1DG103500 Rh4AG176900 Rh4AG196400 Rh4AG232100 Rh4AG308800 Rh4DG141600 Rh4DG194000 Rh4DG194100 Rh4DG194300 Rh4DG230600 Rh5AG177800 Rh5AG188100 Rh5AG188800 Rh5AG188900 Rh5AG199400 Rh5DG187300 Rh5DG187400 Rh5DG188000 Rh5DG199900
rosa_wichuraiana Rw0G018630 Rw1G007730 Rw4G012100 Rw4G016700 Rw4G020190 Rw5G016100 Rw5G017090 Rw5G017100 Rw5G017110 Rw5G018170 Rw5G018180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 218
AatII GACGTC 1 cut(s) 1320
Acc16I TGCGCA 1 cut(s) 929
Acc36I ACCTGC 2 cut(s) 1170, 1356
AccB1I GGYRCC 1 cut(s) 808
AccB7I CCANNNNNTGG 1 cut(s) 1247
AccBSI CCGCTC 1 cut(s) 1143
AccI GTMKAC 1 cut(s) 1160
AccII CGCG 1 cut(s) 740
AciI CCGC 4 cut(s) 519, 573, 1127, 1143
AclWI GGATC 3 cut(s) 67, 252, 421
AcoI YGGCCR 3 cut(s) 214, 615, 1323
AcsI RAATTY 5 cut(s) 162, 320, 653, 771, 970
AcuI CTGAAG 1 cut(s) 306
AcvI CACGTG 1 cut(s) 824
AcyI GRCGYC 1 cut(s) 1317
AfaI GTAC 3 cut(s) 625, 639, 983
AfiI CCNNNNNNNGG 4 cut(s) 314, 399, 1119, 1247
AflIII ACRYGT 2 cut(s) 821, 823
AgsI TTSAA 6 cut(s) 68, 339, 374, 512, 830, 1309
AjnI CCWGG 2 cut(s) 216, 495
AluBI AGCT 8 cut(s) 126, 345, 470, 554, 668, 710, 1029, 1173
AluI AGCT 8 cut(s) 126, 345, 470, 554, 668, 710, 1029, 1173
Alw21I GWGCWC 1 cut(s) 712
Alw26I GTCTC 3 cut(s) 467, 727, 1239
AlwI GGATC 3 cut(s) 67, 252, 421
AlwNI CAGNNNCTG 1 cut(s) 1173
Ama87I CYCGRG 2 cut(s) 647, 1022
AoxI GGCC 4 cut(s) 214, 498, 615, 1323
ApoI RAATTY 5 cut(s) 162, 320, 653, 771, 970
AspLEI GCGC 2 cut(s) 803, 930
AspS9I GGNCC 1 cut(s) 4
AsuHPI GGTGA 4 cut(s) 536, 623, 1106, 1292
AsuII TTCGAA 1 cut(s) 767
AsuNHI GCTAGC 1 cut(s) 797
AvaI CYCGRG 2 cut(s) 647, 1022
AvaII GGWCC 1 cut(s) 4
BalI TGGCCA 1 cut(s) 1325
BanI GGYRCC 1 cut(s) 808
BanII GRGCYC 1 cut(s) 712
BauI CACGAG 1 cut(s) 1270
BbrPI CACGTG 1 cut(s) 824
BbsI GAAGAC 1 cut(s) 1320
Bbv12I GWGCWC 1 cut(s) 712
BccI CCATC 9 cut(s) 40, 688, 907, 930, 1203, 1228, 1249, 1271, 1277
BceAI ACGGC 1 cut(s) 229
BcgI CGANNNNNNTGC 2 cut(s) 858, 892
BciT130I CCWGG 2 cut(s) 218, 497
BclI TGATCA 2 cut(s) 145, 996
BcoDI GTCTC 3 cut(s) 467, 727, 1239
BfaI CTAG 3 cut(s) 491, 704, 798
BfmI CTRYAG 2 cut(s) 346, 987
BfoI RGCGCY 1 cut(s) 804
BfuAI ACCTGC 2 cut(s) 1170, 1356
BmcAI AGTACT 1 cut(s) 625
Bme1390I CCNGG 2 cut(s) 218, 497
Bme18I GGWCC 1 cut(s) 4
BmeT110I CYCGRG 2 cut(s) 647, 1022
BmgT120I GGNCC 1 cut(s) 4
BmiI GGNNCC 1 cut(s) 810
BmrFI CCNGG 2 cut(s) 218, 497
BmsI GCATC 5 cut(s) 550, 751, 845, 878, 1084
BmtI GCTAGC 1 cut(s) 801
BpiI GAAGAC 1 cut(s) 1320
Bpu14I TTCGAA 1 cut(s) 767
BpuEI CTTGAG 2 cut(s) 148, 767
Bsa29I ATCGAT 1 cut(s) 231
BsaAI YACGTR 2 cut(s) 637, 824
BsaBI GATNNNNATC 1 cut(s) 150
BsaHI GRCGYC 1 cut(s) 1317
BsaJI CCNNGG 5 cut(s) 355, 648, 693, 789, 804
BsaXI ACNNNNNCTCC 2 cut(s) 699, 729
Bsc4I CCNNNNNNNGG 4 cut(s) 314, 399, 1119, 1247
Bse1I ACTGG 1 cut(s) 618
Bse8I GATNNNNATC 1 cut(s) 150
BseBI CCWGG 2 cut(s) 218, 497
BseCI ATCGAT 1 cut(s) 231
BseDI CCNNGG 5 cut(s) 355, 648, 693, 789, 804
BseGI GGATG 6 cut(s) 235, 680, 899, 1075, 1214, 1241
BseJI GATNNNNATC 1 cut(s) 150
BseLI CCNNNNNNNGG 4 cut(s) 314, 399, 1119, 1247
BseMII CTCAG 2 cut(s) 462, 1057
BseNI ACTGG 1 cut(s) 618
BseRI GAGGAG 1 cut(s) 760
BsgI GTGCAG 2 cut(s) 582, 1198
Bsh1236I CGCG 1 cut(s) 740
Bsh1285I CGRYCG 1 cut(s) 1377
BshFI GGCC 4 cut(s) 216, 500, 617, 1325
BshNI GGYRCC 1 cut(s) 808
BshVI ATCGAT 1 cut(s) 231
BsiEI CGRYCG 1 cut(s) 1377
BsiHKAI GWGCWC 1 cut(s) 712
BsiHKCI CYCGRG 2 cut(s) 647, 1022
BsiSI CCGG 1 cut(s) 315
BslFI GGGAC 1 cut(s) 375
BslI CCNNNNNNNGG 4 cut(s) 314, 399, 1119, 1247
BsmAI GTCTC 3 cut(s) 467, 727, 1239
BsmBI CGTCTC 1 cut(s) 1239
BsmFI GGGAC 1 cut(s) 375
BsmI GAATGC 1 cut(s) 540
BsnI GGCC 4 cut(s) 216, 500, 617, 1325
BsoBI CYCGRG 2 cut(s) 647, 1022
Bsp119I TTCGAA 1 cut(s) 767
Bsp1286I GDGCHC 1 cut(s) 712
Bsp143I GATC 8 cut(s) 57, 72, 145, 232, 257, 426, 875, 996
BspACI CCGC 4 cut(s) 519, 573, 1127, 1143
BspANI GGCC 4 cut(s) 216, 500, 617, 1325
BspCNI CTCAG 2 cut(s) 463, 1056
BspDI ATCGAT 1 cut(s) 231
BspFNI CGCG 1 cut(s) 740
BspLI GGNNCC 1 cut(s) 810
BspMAI CTGCAG 2 cut(s) 350, 991
BspMI ACCTGC 2 cut(s) 1170, 1356
BspOI GCTAGC 1 cut(s) 801
BspPI GGATC 3 cut(s) 67, 252, 421
BspT104I TTCGAA 1 cut(s) 767
BspT107I GGYRCC 1 cut(s) 808
BsrBI CCGCTC 1 cut(s) 1143
BsrI ACTGG 1 cut(s) 618
BssECI CCNNGG 5 cut(s) 355, 648, 693, 789, 804
BssMI GATC 8 cut(s) 57, 72, 145, 232, 257, 426, 875, 996
BssNAI GTATAC 1 cut(s) 1161
BssNI GRCGYC 1 cut(s) 1317
BssSI CACGAG 1 cut(s) 1270
BssT1I CCWWGG 2 cut(s) 693, 789
Bst1107I GTATAC 1 cut(s) 1161
Bst2BI CACGAG 1 cut(s) 1270
Bst2UI CCWGG 2 cut(s) 218, 497
Bst4CI ACNGT 8 cut(s) 282, 356, 389, 438, 808, 919, 1114, 1378
BstACI GRCGYC 1 cut(s) 1317
BstAPI GCANNNNNTGC 1 cut(s) 1176
BstBAI YACGTR 2 cut(s) 637, 824
BstBI TTCGAA 1 cut(s) 767
BstC8I GCNNGC 2 cut(s) 799, 945
BstDEI CTNAG 2 cut(s) 471, 1043
BstDSI CCRYGG 2 cut(s) 355, 804
BstF5I GGATG 6 cut(s) 235, 680, 899, 1075, 1214, 1241
BstFNI CGCG 1 cut(s) 740
BstH2I RGCGCY 1 cut(s) 804
BstHHI GCGC 2 cut(s) 803, 930
BstKTI GATC 8 cut(s) 60, 75, 148, 235, 260, 429, 878, 999
BstMAI GTCTC 3 cut(s) 467, 727, 1239
BstMBI GATC 8 cut(s) 57, 72, 145, 232, 257, 426, 875, 996
BstMCI CGRYCG 1 cut(s) 1377
BstMWI GCNNNNNNNGC 7 cut(s) 213, 560, 569, 602, 674, 800, 1176
BstNI CCWGG 2 cut(s) 218, 497
BstNSI RCATGY 1 cut(s) 928
BstSCI CCNGG 2 cut(s) 216, 495
BstSFI CTRYAG 2 cut(s) 346, 987
BstUI CGCG 1 cut(s) 740
BstV2I GAAGAC 1 cut(s) 1320
BstX2I RGATCY 2 cut(s) 257, 426
BstXI CCANNNNNNTGG 1 cut(s) 906
BstYI RGATCY 2 cut(s) 257, 426
BstZ17I GTATAC 1 cut(s) 1161
Bsu15I ATCGAT 1 cut(s) 231
BsuRI GGCC 4 cut(s) 216, 500, 617, 1325
BsuTUI ATCGAT 1 cut(s) 231
BtgI CCRYGG 2 cut(s) 355, 804
BtsCI GGATG 6 cut(s) 235, 680, 899, 1075, 1214, 1241
BtsI GCAGTG 1 cut(s) 355
BtsIMutI CAGTG 3 cut(s) 278, 355, 1096
BveI ACCTGC 2 cut(s) 1170, 1356
Cac8I GCNNGC 2 cut(s) 799, 945
CaiI CAGNNNCTG 1 cut(s) 1173
CfoI GCGC 2 cut(s) 803, 930
Cfr13I GGNCC 1 cut(s) 4
ClaI ATCGAT 1 cut(s) 231
CseI GACGC 1 cut(s) 1284
Csp6I GTAC 3 cut(s) 624, 638, 982
CviAII CATG 4 cut(s) 904, 925, 1224, 1321
CviQI GTAC 3 cut(s) 624, 638, 982
DdeI CTNAG 2 cut(s) 471, 1043
DpnI GATC 8 cut(s) 59, 74, 147, 234, 259, 428, 877, 998
DpnII GATC 8 cut(s) 57, 72, 145, 232, 257, 426, 875, 996
DraI TTTAAA 1 cut(s) 325
DrdI GACNNNNNNGTC 1 cut(s) 218
DseDI GACNNNNNNGTC 1 cut(s) 218
EaeI YGGCCR 3 cut(s) 214, 615, 1323
EciI GGCGGA 1 cut(s) 534
Ecl136II GAGCTC 1 cut(s) 710
Eco130I CCWWGG 2 cut(s) 693, 789
Eco24I GRGCYC 1 cut(s) 712
Eco32I GATATC 1 cut(s) 482
Eco47I GGWCC 1 cut(s) 4
Eco53kI GAGCTC 1 cut(s) 710
Eco57I CTGAAG 1 cut(s) 306
Eco72I CACGTG 1 cut(s) 824
Eco88I CYCGRG 2 cut(s) 647, 1022
EcoICRI GAGCTC 1 cut(s) 710
EcoRI GAATTC 1 cut(s) 653
EcoRII CCWGG 2 cut(s) 216, 495
EcoRV GATATC 1 cut(s) 482
EcoT14I CCWWGG 2 cut(s) 693, 789
EcoT38I GRGCYC 1 cut(s) 712
ErhI CCWWGG 2 cut(s) 693, 789
Esp3I CGTCTC 1 cut(s) 1239
FaeI CATG 4 cut(s) 907, 928, 1227, 1324
FaqI GGGAC 1 cut(s) 375
FatI CATG 4 cut(s) 903, 924, 1223, 1320
FauI CCCGC 1 cut(s) 1120
FbaI TGATCA 2 cut(s) 145, 996
FblI GTMKAC 1 cut(s) 1160
FokI GGATG 6 cut(s) 222, 667, 886, 1062, 1221, 1228
FriOI GRGCYC 1 cut(s) 712
FspBI CTAG 3 cut(s) 491, 704, 798
FspI TGCGCA 1 cut(s) 929
GlaI GCGC 2 cut(s) 802, 929
HaeII RGCGCY 1 cut(s) 804
HaeIII GGCC 4 cut(s) 216, 500, 617, 1325
HapII CCGG 1 cut(s) 315
HgaI GACGC 1 cut(s) 1284
HhaI GCGC 2 cut(s) 803, 930
Hin1I GRCGYC 1 cut(s) 1317
Hin1II CATG 4 cut(s) 907, 928, 1227, 1324
Hin6I GCGC 2 cut(s) 801, 928
HinP1I GCGC 2 cut(s) 801, 928
HindIII AAGCTT 1 cut(s) 124
HinfI GANTC 5 cut(s) 300, 689, 698, 1086, 1369
HpaII CCGG 1 cut(s) 315
HphI GGTGA 4 cut(s) 536, 623, 1106, 1292
Hpy166II GTNNAC 5 cut(s) 385, 462, 922, 1040, 1161
Hpy188I TCNGA 4 cut(s) 55, 286, 1208, 1374
Hpy188III TCNNGA 7 cut(s) 61, 110, 371, 647, 873, 1024, 1045
Hpy8I GTNNAC 5 cut(s) 385, 462, 922, 1040, 1161
Hpy99I CGWCG 5 cut(s) 212, 215, 745, 1346, 1382
HpyAV CCTTC 3 cut(s) 249, 319, 1042
HpyCH4III ACNGT 8 cut(s) 282, 356, 389, 438, 808, 919, 1114, 1378
HpyCH4IV ACGT 4 cut(s) 636, 823, 1232, 1317
HpyCH4V TGCA 8 cut(s) 348, 365, 599, 665, 914, 989, 1167, 1179
HpyF10VI GCNNNNNNNGC 7 cut(s) 213, 560, 569, 602, 674, 800, 1176
HpyF3I CTNAG 2 cut(s) 471, 1043
HpySE526I ACGT 4 cut(s) 636, 823, 1232, 1317
Hsp92I GRCGYC 1 cut(s) 1317
Hsp92II CATG 4 cut(s) 907, 928, 1227, 1324
HspAI GCGC 2 cut(s) 801, 928
Ksp22I TGATCA 2 cut(s) 145, 996
Kzo9I GATC 8 cut(s) 57, 72, 145, 232, 257, 426, 875, 996
LmnI GCTCC 3 cut(s) 37, 707, 715
LweI GCATC 5 cut(s) 550, 751, 845, 878, 1084
MaeI CTAG 3 cut(s) 491, 704, 798
MaeII ACGT 4 cut(s) 636, 823, 1232, 1317
MaeIII GTNAC 4 cut(s) 350, 715, 949, 1265
MalI GATC 8 cut(s) 59, 74, 147, 234, 259, 428, 877, 998
MbiI CCGCTC 1 cut(s) 1143
MboI GATC 8 cut(s) 57, 72, 145, 232, 257, 426, 875, 996
MboII GAAGA 2 cut(s) 175, 1325
MflI RGATCY 2 cut(s) 257, 426
MhlI GDGCHC 1 cut(s) 712
MlsI TGGCCA 1 cut(s) 1325
MluCI AATT 8 cut(s) 87, 162, 320, 653, 771, 970, 1201, 1254
MluNI TGGCCA 1 cut(s) 1325
MlyI GAGTC 2 cut(s) 692, 1095
MmeI TCCRAC 3 cut(s) 128, 285, 470
MnlI CCTC 7 cut(s) 143, 302, 393, 643, 738, 1051, 1090
Mox20I TGGCCA 1 cut(s) 1325
MscI TGGCCA 1 cut(s) 1325
MseI TTAA 4 cut(s) 90, 120, 324, 1253
MslI CAYNNNNRTG 2 cut(s) 904, 1080
Msp20I TGGCCA 1 cut(s) 1325
MspA1I CMGCKG 2 cut(s) 345, 1173
MspI CCGG 1 cut(s) 315
MspR9I CCNGG 2 cut(s) 218, 497
Mva1269I GAATGC 1 cut(s) 540
MvaI CCWGG 2 cut(s) 218, 497
MvnI CGCG 1 cut(s) 740
MwoI GCNNNNNNNGC 7 cut(s) 213, 560, 569, 602, 674, 800, 1176
NdeII GATC 8 cut(s) 57, 72, 145, 232, 257, 426, 875, 996
NheI GCTAGC 1 cut(s) 797
NlaIII CATG 4 cut(s) 907, 928, 1227, 1324
NlaIV GGNNCC 1 cut(s) 810
NmeAIII GCCGAG 1 cut(s) 593
NmuCI GTSAC 4 cut(s) 350, 715, 949, 1265
NsbI TGCGCA 1 cut(s) 929
NspI RCATGY 1 cut(s) 928
NspV TTCGAA 1 cut(s) 767
PaeR7I CTCGAG 1 cut(s) 1022
PcsI WCGNNNNNNNCGW 1 cut(s) 1338
PctI GAATGC 1 cut(s) 540
PfeI GAWTC 3 cut(s) 300, 689, 1369
PflMI CCANNNNNTGG 1 cut(s) 1247
PleI GAGTC 2 cut(s) 692, 1094
PmaCI CACGTG 1 cut(s) 824
PmlI CACGTG 1 cut(s) 824
PpsI GAGTC 2 cut(s) 692, 1094
Ppu21I YACGTR 2 cut(s) 637, 824
Psp124BI GAGCTC 1 cut(s) 712
Psp6I CCWGG 2 cut(s) 216, 495
PspCI CACGTG 1 cut(s) 824
PspGI CCWGG 2 cut(s) 216, 495
PspN4I GGNNCC 1 cut(s) 810
PspPI GGNCC 1 cut(s) 4
PstI CTGCAG 2 cut(s) 350, 991
PstNI CAGNNNCTG 1 cut(s) 1173
PsuI RGATCY 2 cut(s) 257, 426
PvuII CAGCTG 2 cut(s) 345, 1173
RsaI GTAC 3 cut(s) 625, 639, 983
RsaNI GTAC 3 cut(s) 624, 638, 982
RseI CAYNNNNRTG 2 cut(s) 904, 1080
SacI GAGCTC 1 cut(s) 712
SaqAI TTAA 4 cut(s) 90, 120, 324, 1253
Sau3AI GATC 8 cut(s) 57, 72, 145, 232, 257, 426, 875, 996
Sau96I GGNCC 1 cut(s) 4
ScaI AGTACT 1 cut(s) 625
SchI GAGTC 2 cut(s) 692, 1095
ScrFI CCNGG 2 cut(s) 218, 497
SduI GDGCHC 1 cut(s) 712
SfaNI GCATC 5 cut(s) 550, 751, 845, 878, 1084
SfcI CTRYAG 2 cut(s) 346, 987
Sfr274I CTCGAG 1 cut(s) 1022
SfuI TTCGAA 1 cut(s) 767
SinI GGWCC 1 cut(s) 4
SlaI CTCGAG 1 cut(s) 1022
SmiI ATTTAAAT 1 cut(s) 325
SmiMI CAYNNNNRTG 2 cut(s) 904, 1080
SmlI CTYRAG 3 cut(s) 127, 782, 1022
SmoI CTYRAG 3 cut(s) 127, 782, 1022
Sse9I AATT 8 cut(s) 87, 162, 320, 653, 771, 970, 1201, 1254
SsiI CCGC 4 cut(s) 519, 573, 1127, 1143
SspMI CTAG 3 cut(s) 491, 704, 798
SstI GAGCTC 1 cut(s) 712
StyD4I CCNGG 2 cut(s) 216, 495
StyI CCWWGG 2 cut(s) 693, 789
SwaI ATTTAAAT 1 cut(s) 325
TaaI ACNGT 8 cut(s) 282, 356, 389, 438, 808, 919, 1114, 1378
TaiI ACGT 4 cut(s) 639, 826, 1235, 1320
TaqI TCGA 7 cut(s) 231, 298, 398, 767, 878, 1023, 1332
TasI AATT 8 cut(s) 87, 162, 320, 653, 771, 970, 1201, 1254
TatI WGTACW 1 cut(s) 623
TauI GCSGC 1 cut(s) 575
TfiI GAWTC 3 cut(s) 300, 689, 1369
Tru1I TTAA 4 cut(s) 90, 120, 324, 1253
Tru9I TTAA 4 cut(s) 90, 120, 324, 1253
TscAI CASTG 3 cut(s) 285, 355, 1096
TseFI GTSAC 4 cut(s) 350, 715, 949, 1265
Tsp45I GTSAC 4 cut(s) 350, 715, 949, 1265
TspDTI ATGAA 5 cut(s) 32, 571, 908, 1209, 1382
TspGWI ACGGA 2 cut(s) 743, 1176
TspRI CASTG 3 cut(s) 285, 355, 1096
Van91I CCANNNNNTGG 1 cut(s) 1247
VpaK11BI GGWCC 1 cut(s) 4
XapI RAATTY 5 cut(s) 162, 320, 653, 771, 970
XceI RCATGY 1 cut(s) 928
XhoI CTCGAG 1 cut(s) 1022
XmiI GTMKAC 1 cut(s) 1160
XspI CTAG 3 cut(s) 491, 704, 798
ZraI GACGTC 1 cut(s) 1318
ZrmI AGTACT 1 cut(s) 625
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.