Rorug05G0095200

BAHD acyltransferase At5g47980-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
8471133 .. 8472889
1757 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0095200.1

Sequence Viewer

Length: 402 bp
ATGGCGGTTCCGCTGTTGAAGAAGGCGATTGTGAAGAAGAGGGTCAAGCAGTTCAAGAGGCCCCAATGGGACCGCAAGATCTGCGTCAAGACCAACTGGAGGAGGCCTAAGGGTATTGACTCTCGTGTACGAAGAAAGTTCAAGGGAGTTACTCTCATGCCCAACATTGGTTATGGTTCTGACAAGAAGACTCGCCATTATCTTCCCAATCATTTCAAGAAGTTTGTTGTGCACAATGTCAAGGAGCTAGAAGTTCTGATGATGCACAATAGGACCTATTGTGCCGAGATTGCACACAATATCTCCACAAGGAAGAGGAAGGAAATTGTTGAGAGAGCCGCCCAGCTTGACGTTGTTGTCACTAACAAGCTTGCTAGGTTGCGTAGCCAAGAGGATGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

133

Amino Acids

15.82

Weight (kDa)

10.7

Isoelectric Point (pI)

57.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ribosomal_L32e PF01655 16 - 122 6.9e-48 Ribosomal protein L32
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000200)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G24420 AT1G24420
fragaria_vesca FvH4_3g15900 FvH4_3g15901 FvH4_3g15902 FvH4_3g15903 FvH4_3g15910 FvH4_3g16350 FvH4_3g16950 FvH4_3g17000 FvH4_3g17010 FvH4_3g35170 FvH4_4g17550
malus_domestica MD02G1273000.v1.1 MD03G1110800.v1.1 MD05G1218500.v1.1 MD05G1218600.v1.1 MD05G1218800.v1.1 MD05G1218900.v1.1 MD05G1219000.v1.1 MD09G1267700.v1.1 MD10G1199600.v1.1 MD10G1199700.v1.1 MD10G1200000.v1.1 MD10G1200100.v1.1 MD10G1200300.v1.1 MD10G1201000.v1.1 MD11G1116900.v1.1 MD11G1117000.v1.1 MD11G1275900.v1.1 MD13G1109500.v1.1 MD14G1011700.v1.1 MD14G1015400.v1.1 MD14G1015500.v1.1
prunus_persica Prupe.4G140700_v2.0.a1 Prupe.4G140800_v2.0.a1 Prupe.4G141500_v2.0.a1
pyrus_communis pycom02g23390 pycom05g19930 pycom05g19940 pycom05g19970 pycom05g19980 pycom05g19990 pycom05g20000 pycom05g20020 pycom10g17190 pycom10g17200 pycom10g17210 pycom10g17220 pycom10g24650 pycom11g24430 pycom14g01050 pycom14g01330 pycom16g06450
rosa_chinensis RchiOBHm_Chr4g0391831 RchiOBHm_Chr4g0391841 RchiOBHm_Chr4g0407921 RchiOBHm_Chr4g0408021 RchiOBHm_Chr4g0412981 RchiOBHm_Chr4g0415601 RchiOBHm_Chr4g0415621 RchiOBHm_Chr4g0421461 RchiOBHm_Chr4g0431781 RchiOBHm_Chr5g0026651 RchiOBHm_Chr5g0026721 RchiOBHm_Chr5g0026731 RchiOBHm_Chr5g0026741 RchiOBHm_Chr5g0026751 RchiOBHm_Chr5g0026821 RchiOBHm_Chr5g0028341
rosa_laevigata RLG00000006890 RLG00000007680 RLG00000007682 RLG00000008056 RLG00000008057 RLG00000008058 RLG00000008060 RLG00000008681 RLG00000032943 RLG00000032951 RLG00000032955 RLG00000032956 RLG00000032957 RLG00000032958 RLG00000032961 RLG00000033083 RLG00000033084
rosa_multiflora Rmu_co7991326.1_g000001 Rmu_co8439139.1_g000001 Rmu_co8448401.1_g000001 Rmu_sc0001194.1_g000015 Rmu_sc0001962.1_g000015 Rmu_sc0002073.1_g000012 Rmu_sc0004490.1_g000006 Rmu_sc0004599.1_g000009 Rmu_sc0004805.1_g000044 Rmu_sc0008526.1_g000001 Rmu_ssc0000172.1_g000021 Rmu_ssc0000172.1_g000031 Rmu_ssc0000172.1_g000032
rosa_roxburghii Rroxscaffold_1G00051360 Rroxscaffold_1G00051390 Rroxscaffold_1G00052710 Rroxscaffold_1G00052750 Rroxscaffold_1G00052810 Rroxscaffold_1G00052820 Rroxscaffold_4G00321060 Rroxscaffold_4G00321070 Rroxscaffold_5G00352550 Rroxscaffold_5G00359410
rosa_rugosa Rorug01G0079700 Rorug01G0080700 Rorug04G0083200 Rorug04G0083400 Rorug04G0135400 Rorug04G0135500.1 Rorug04G0135900 Rorug04G0171400 Rorug04G0252300 Rorug05G0095200 Rorug05G0095300 Rorug05G0095400 Rorug05G0402400
rosa_samantha Rh1DG103500 Rh4AG176900 Rh4AG196400 Rh4AG232100 Rh4AG308800 Rh4DG141600 Rh4DG194000 Rh4DG194100 Rh4DG194300 Rh4DG230600 Rh5AG177800 Rh5AG188100 Rh5AG188800 Rh5AG188900 Rh5AG199400 Rh5DG187300 Rh5DG187400 Rh5DG188000 Rh5DG199900
rosa_wichuraiana Rw0G018630 Rw1G007730 Rw4G012100 Rw4G016700 Rw4G020190 Rw5G016100 Rw5G017090 Rw5G017100 Rw5G017110 Rw5G018170 Rw5G018180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 356
AciI CCGC 4 cut(s) 5, 11, 73, 339
AfaI GTAC 1 cut(s) 129
AfiI CCNNNNNNNGG 2 cut(s) 99, 167
AgsI TTSAA 4 cut(s) 19, 55, 142, 217
AluBI AGCT 3 cut(s) 247, 346, 370
AluI AGCT 3 cut(s) 247, 346, 370
Alw21I GWGCWC 1 cut(s) 234
Alw44I GTGCAC 1 cut(s) 230
AoxI GGCC 2 cut(s) 59, 104
ApaLI GTGCAC 1 cut(s) 230
AspS9I GGNCC 3 cut(s) 60, 70, 273
AvaII GGWCC 2 cut(s) 70, 273
AxyI CCTNAGG 1 cut(s) 108
BaeGI GKGCMC 1 cut(s) 234
BauI CACGAG 1 cut(s) 123
BbsI GAAGAC 1 cut(s) 194
Bbv12I GWGCWC 1 cut(s) 234
BfaI CTAG 2 cut(s) 248, 375
BglII AGATCT 1 cut(s) 78
BisI GCNGC 1 cut(s) 339
BlsI GCNGC 1 cut(s) 340
Bme18I GGWCC 2 cut(s) 70, 273
BmgT120I GGNCC 3 cut(s) 60, 70, 273
BmiI GGNNCC 3 cut(s) 9, 62, 71
BmsI GCATC 1 cut(s) 252
BpiI GAAGAC 1 cut(s) 194
BplI GAGNNNNNCTC 2 cut(s) 138, 170
BpmI CTGGAG 1 cut(s) 118
BsaXI ACNNNNNCTCC 2 cut(s) 287, 317
Bsc4I CCNNNNNNNGG 2 cut(s) 99, 167
Bse1I ACTGG 1 cut(s) 101
Bse21I CCTNAGG 1 cut(s) 108
BseGI GGATG 1 cut(s) 400
BseLI CCNNNNNNNGG 2 cut(s) 99, 167
BseNI ACTGG 1 cut(s) 101
BseRI GAGGAG 1 cut(s) 115
BseSI GKGCMC 1 cut(s) 234
BseYI CCCAGC 1 cut(s) 342
BshFI GGCC 2 cut(s) 61, 106
BsiHKAI GWGCWC 1 cut(s) 234
BslFI GGGAC 1 cut(s) 83
BslI CCNNNNNNNGG 2 cut(s) 99, 167
BsmFI GGGAC 1 cut(s) 83
BsnI GGCC 2 cut(s) 61, 106
Bsp1286I GDGCHC 1 cut(s) 234
Bsp143I GATC 1 cut(s) 78
BspACI CCGC 4 cut(s) 5, 11, 73, 339
BspANI GGCC 2 cut(s) 61, 106
BspLI GGNNCC 3 cut(s) 9, 62, 71
BsrI ACTGG 1 cut(s) 101
BssMI GATC 1 cut(s) 78
BssSI CACGAG 1 cut(s) 123
Bst2BI CACGAG 1 cut(s) 123
Bst6I CTCTTC 2 cut(s) 32, 308
BstAPI GCANNNNNTGC 1 cut(s) 81
BstC8I GCNNGC 1 cut(s) 372
BstDEI CTNAG 1 cut(s) 108
BstF5I GGATG 1 cut(s) 400
BstKTI GATC 1 cut(s) 81
BstMBI GATC 1 cut(s) 78
BstMWI GCNNNNNNNGC 2 cut(s) 81, 290
BstSLI GKGCMC 1 cut(s) 234
BstV2I GAAGAC 1 cut(s) 194
BstX2I RGATCY 1 cut(s) 78
BstYI RGATCY 1 cut(s) 78
Bsu36I CCTNAGG 1 cut(s) 108
BsuRI GGCC 2 cut(s) 61, 106
BtsCI GGATG 1 cut(s) 400
Cac8I GCNNGC 1 cut(s) 372
Cfr13I GGNCC 3 cut(s) 60, 70, 273
CseI GACGC 1 cut(s) 73
Csp6I GTAC 1 cut(s) 128
CviAII CATG 1 cut(s) 157
CviJI RGCY 7 cut(s) 61, 106, 247, 338, 346, 370, 387
CviKI_1 RGCY 7 cut(s) 61, 106, 247, 338, 346, 370, 387
CviQI GTAC 1 cut(s) 128
DdeI CTNAG 1 cut(s) 108
DpnI GATC 1 cut(s) 80
DpnII GATC 1 cut(s) 78
DrdI GACNNNNNNGTC 1 cut(s) 356
DseDI GACNNNNNNGTC 1 cut(s) 356
Eam1104I CTCTTC 2 cut(s) 32, 308
EarI CTCTTC 2 cut(s) 32, 308
Eco147I AGGCCT 1 cut(s) 106
Eco47I GGWCC 2 cut(s) 70, 273
Eco81I CCTNAGG 1 cut(s) 108
EcoO109I RGGNCCY 2 cut(s) 60, 273
FaeI CATG 1 cut(s) 160
FaiI YATR 2 cut(s) 158, 174
FaqI GGGAC 1 cut(s) 83
FatI CATG 1 cut(s) 156
Fnu4HI GCNGC 1 cut(s) 339
Fsp4HI GCNGC 1 cut(s) 339
FspBI CTAG 2 cut(s) 248, 375
GluI GCNGC 1 cut(s) 339
GsaI CCCAGC 1 cut(s) 346
GsuI CTGGAG 1 cut(s) 118
HaeIII GGCC 2 cut(s) 61, 106
HgaI GACGC 1 cut(s) 73
Hin1II CATG 1 cut(s) 160
HindIII AAGCTT 1 cut(s) 368
HinfI GANTC 2 cut(s) 119, 190
Hpy166II GTNNAC 2 cut(s) 128, 232
Hpy188I TCNGA 2 cut(s) 181, 258
Hpy188III TCNNGA 3 cut(s) 55, 88, 217
Hpy8I GTNNAC 2 cut(s) 128, 232
HpyAV CCTTC 2 cut(s) 16, 313
HpyCH4IV ACGT 1 cut(s) 351
HpyCH4V TGCA 3 cut(s) 232, 265, 293
HpyF10VI GCNNNNNNNGC 2 cut(s) 81, 290
HpyF3I CTNAG 1 cut(s) 108
HpySE526I ACGT 1 cut(s) 351
Hsp92II CATG 1 cut(s) 160
Kzo9I GATC 1 cut(s) 78
LmnI GCTCC 1 cut(s) 244
LpnPI CCDG 2 cut(s) 82, 356
LweI GCATC 1 cut(s) 252
MaeI CTAG 2 cut(s) 248, 375
MaeII ACGT 1 cut(s) 351
MaeIII GTNAC 2 cut(s) 148, 358
MalI GATC 1 cut(s) 80
MboI GATC 1 cut(s) 78
MboII GAAGA 7 cut(s) 31, 46, 49, 144, 194, 199, 325
MflI RGATCY 1 cut(s) 78
MhlI GDGCHC 1 cut(s) 234
MluCI AATT 1 cut(s) 324
MlyI GAGTC 2 cut(s) 113, 184
MnlI CCTC 6 cut(s) 33, 51, 93, 96, 309, 385
MspA1I CMGCKG 1 cut(s) 13
MwoI GCNNNNNNNGC 2 cut(s) 81, 290
NdeII GATC 1 cut(s) 78
NlaIII CATG 1 cut(s) 160
NlaIV GGNNCC 3 cut(s) 9, 62, 71
NmeAIII GCCGAG 1 cut(s) 310
NmuCI GTSAC 1 cut(s) 358
PceI AGGCCT 1 cut(s) 106
PkrI GCNGC 1 cut(s) 340
PleI GAGTC 2 cut(s) 113, 184
PpsI GAGTC 2 cut(s) 113, 184
PpuMI RGGWCCY 1 cut(s) 273
Psp5II RGGWCCY 1 cut(s) 273
PspFI CCCAGC 1 cut(s) 342
PspN4I GGNNCC 3 cut(s) 9, 62, 71
PspPI GGNCC 3 cut(s) 60, 70, 273
PspPPI RGGWCCY 1 cut(s) 273
PsuI RGATCY 1 cut(s) 78
RsaI GTAC 1 cut(s) 129
RsaNI GTAC 1 cut(s) 128
SatI GCNGC 1 cut(s) 339
Sau3AI GATC 1 cut(s) 78
Sau96I GGNCC 3 cut(s) 60, 70, 273
SchI GAGTC 2 cut(s) 113, 184
SduI GDGCHC 1 cut(s) 234
SetI ASST 6 cut(s) 249, 278, 348, 354, 372, 380
SfaNI GCATC 1 cut(s) 252
SinI GGWCC 2 cut(s) 70, 273
Sse9I AATT 1 cut(s) 324
SseBI AGGCCT 1 cut(s) 106
SsiI CCGC 4 cut(s) 5, 11, 73, 339
SspMI CTAG 2 cut(s) 248, 375
StuI AGGCCT 1 cut(s) 106
TaiI ACGT 1 cut(s) 354
TasI AATT 1 cut(s) 324
TauI GCSGC 1 cut(s) 341
TseFI GTSAC 1 cut(s) 358
Tsp45I GTSAC 1 cut(s) 358
VneI GTGCAC 1 cut(s) 230
VpaK11BI GGWCC 2 cut(s) 70, 273
XspI CTAG 2 cut(s) 248, 375
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.