RLG00000032958

BAHD acyltransferase At5g47980-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
21371168 .. 21372547
1380 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000032958

Sequence Viewer

Length: 1218 bp
ATGGATACACAGATGAAGGTTGAAATCATTGAGAGGAAAATAATTAAGTCATCCTCCCCAACTCCTCATCATCTTAGAAATTTTGGGCTGTCATTTTTCGATCAGATGGCAATTACAATTTACACTCCACTCCTTCTCTTCTTTCCAAATACTACTTCTAGTAAGGTTGAAATAGAGCATCTAACAGAATCATTAGGTAAAACTCTCACTCACTTCTACCCTTTAGCAGGAAGAATTAAAGGTAATACAGTGGTCGAATGTAATGATGATGGAGCTGAATTTGTCAAAGCGCAAGTCACCTGTTCCTTATCAGATTTTCTAGAAAATCCAGAAGCCGAGATATTAGAACAGTTCCTTCCAGCTGAGATTTTATCCAAGGAGGCAGGGACTGGTCCTTTGCTTCTTGTGCAAGTCAACTTGTTCGAGTGTGGTGGAATGGCAATTGGGTTTAGCATTTCACATGAGATTGCTGATGCCTCCACACTGTCCACATTCATCAATTGCTGGGCTCAACCACCAGCCCGAGTATACTCCAAAAAGAACATCAATATAACAAGGGGGTATGTGTTTGATGCCTCAAACATTTCTGCTTTACAATCTAAAGTGGCTAGTTCAGCTGTGCCACAACCTACACGTGTAGAAGCGATTTCAGCACTCATTTGGAAATGTGCAGTCGAAGCATCGACTTCAAAATCAGGATCTCAAAGGCCATCAGTATTCAGCCAAGATGTGAACTTGCGTAAAAGGGTTGTGCCGCCCTTGCCTGAAAATTTTGCTGGGAATGTTGTAGGTTTTTATAGATCAAAGGCTGAAGTTGAAGACGGTACTATTGTGGCCATAGATCTAAAAGACTTGGTTTCAAAATTCAGGGAAGGGATTGAAAACTATGCTGCTATAACAAAAACCATATTTGGTTCTGATGAAGCATGGCAAGGGATCAAAGATAAGTACAAGAACCTGAAAAAAAGTGATGACATGGAGTTCTACAGCTGTACAAGTTGGTGTAGGTTTCCGTTTTATGAAGCAGATTTTGGATGGGGAAAGCCAAAATGGGTGAGCATTGCTGGTGTATCAATTGAAAATATTATTGTTTTGTTGGATAAAAGAGATGGGAAGGGAATAGAAGCATGGTTGACTATGAACCAAGAAAACATGGCCTTATTTGAGAGCAGTACAGAGCTGCTTGCGTATGCTTCTCTAAATCCAAGTGTCACCTAA

Protein Analysis

406

Amino Acids

44.87

Weight (kDa)

5.37

Isoelectric Point (pI)

45.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 5 - 171 1.3e-48 Transferase family
Transferase PF02458 183 - 394 2.9e-40 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000200)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G24420 AT1G24420
fragaria_vesca FvH4_3g15900 FvH4_3g15901 FvH4_3g15902 FvH4_3g15903 FvH4_3g15910 FvH4_3g16350 FvH4_3g16950 FvH4_3g17000 FvH4_3g17010 FvH4_3g35170 FvH4_4g17550
malus_domestica MD02G1273000.v1.1 MD03G1110800.v1.1 MD05G1218500.v1.1 MD05G1218600.v1.1 MD05G1218800.v1.1 MD05G1218900.v1.1 MD05G1219000.v1.1 MD09G1267700.v1.1 MD10G1199600.v1.1 MD10G1199700.v1.1 MD10G1200000.v1.1 MD10G1200100.v1.1 MD10G1200300.v1.1 MD10G1201000.v1.1 MD11G1116900.v1.1 MD11G1117000.v1.1 MD11G1275900.v1.1 MD13G1109500.v1.1 MD14G1011700.v1.1 MD14G1015400.v1.1 MD14G1015500.v1.1
prunus_persica Prupe.4G140700_v2.0.a1 Prupe.4G140800_v2.0.a1 Prupe.4G141500_v2.0.a1
pyrus_communis pycom02g23390 pycom05g19930 pycom05g19940 pycom05g19970 pycom05g19980 pycom05g19990 pycom05g20000 pycom05g20020 pycom10g17190 pycom10g17200 pycom10g17210 pycom10g17220 pycom10g24650 pycom11g24430 pycom14g01050 pycom14g01330 pycom16g06450
rosa_chinensis RchiOBHm_Chr4g0391831 RchiOBHm_Chr4g0391841 RchiOBHm_Chr4g0407921 RchiOBHm_Chr4g0408021 RchiOBHm_Chr4g0412981 RchiOBHm_Chr4g0415601 RchiOBHm_Chr4g0415621 RchiOBHm_Chr4g0421461 RchiOBHm_Chr4g0431781 RchiOBHm_Chr5g0026651 RchiOBHm_Chr5g0026721 RchiOBHm_Chr5g0026731 RchiOBHm_Chr5g0026741 RchiOBHm_Chr5g0026751 RchiOBHm_Chr5g0026821 RchiOBHm_Chr5g0028341
rosa_laevigata RLG00000006890 RLG00000007680 RLG00000007682 RLG00000008056 RLG00000008057 RLG00000008058 RLG00000008060 RLG00000008681 RLG00000032943 RLG00000032951 RLG00000032955 RLG00000032956 RLG00000032957 RLG00000032958 RLG00000032961 RLG00000033083 RLG00000033084
rosa_multiflora Rmu_co7991326.1_g000001 Rmu_co8439139.1_g000001 Rmu_co8448401.1_g000001 Rmu_sc0001194.1_g000015 Rmu_sc0001962.1_g000015 Rmu_sc0002073.1_g000012 Rmu_sc0004490.1_g000006 Rmu_sc0004599.1_g000009 Rmu_sc0004805.1_g000044 Rmu_sc0008526.1_g000001 Rmu_ssc0000172.1_g000021 Rmu_ssc0000172.1_g000031 Rmu_ssc0000172.1_g000032
rosa_roxburghii Rroxscaffold_1G00051360 Rroxscaffold_1G00051390 Rroxscaffold_1G00052710 Rroxscaffold_1G00052750 Rroxscaffold_1G00052810 Rroxscaffold_1G00052820 Rroxscaffold_4G00321060 Rroxscaffold_4G00321070 Rroxscaffold_5G00352550 Rroxscaffold_5G00359410
rosa_rugosa Rorug01G0079700 Rorug01G0080700 Rorug04G0083200 Rorug04G0083400 Rorug04G0135400 Rorug04G0135500.1 Rorug04G0135900 Rorug04G0171400 Rorug04G0252300 Rorug05G0095200 Rorug05G0095300 Rorug05G0095400 Rorug05G0402400
rosa_samantha Rh1DG103500 Rh4AG176900 Rh4AG196400 Rh4AG232100 Rh4AG308800 Rh4DG141600 Rh4DG194000 Rh4DG194100 Rh4DG194300 Rh4DG230600 Rh5AG177800 Rh5AG188100 Rh5AG188800 Rh5AG188900 Rh5AG199400 Rh5DG187300 Rh5DG187400 Rh5DG188000 Rh5DG199900
rosa_wichuraiana Rw0G018630 Rw1G007730 Rw4G012100 Rw4G016700 Rw4G020190 Rw5G016100 Rw5G017090 Rw5G017100 Rw5G017110 Rw5G018170 Rw5G018180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 528
AciI CCGC 1 cut(s) 755
AclWI GGATC 2 cut(s) 706, 944
AcoI YGGCCR 1 cut(s) 834
AcsI RAATTY 4 cut(s) 79, 278, 769, 863
AcuI CTGAAG 1 cut(s) 831
AcvI CACGTG 1 cut(s) 635
AfaI GTAC 4 cut(s) 826, 950, 994, 1174
AfiI CCNNNNNNNGG 1 cut(s) 227
AflIII ACRYGT 2 cut(s) 632, 634
AgsI TTSAA 7 cut(s) 23, 170, 690, 818, 861, 881, 1079
AjuI GAANNNNNNNTTGG 4 cut(s) 139, 171, 1014, 1046
AluBI AGCT 5 cut(s) 275, 362, 617, 990, 1180
AluI AGCT 5 cut(s) 275, 362, 617, 990, 1180
AlwI GGATC 2 cut(s) 706, 944
AlwNI CAGNNNCTG 1 cut(s) 389
Ama87I CYCGRG 1 cut(s) 522
AoxI GGCC 3 cut(s) 707, 834, 1155
ApeKI GCWGC 2 cut(s) 890, 1180
ApoI RAATTY 4 cut(s) 79, 278, 769, 863
ArsI GACNNNNNNTTYG 4 cut(s) 279, 311, 379, 411
AspLEI GCGC 1 cut(s) 292
AspS9I GGNCC 1 cut(s) 392
AsuHPI GGTGA 3 cut(s) 289, 1066, 1204
AvaI CYCGRG 1 cut(s) 522
AvaII GGWCC 1 cut(s) 392
BaeI ACNNNNGTAYC 2 cut(s) 816, 849
BalI TGGCCA 1 cut(s) 836
BanII GRGCYC 1 cut(s) 511
BbrPI CACGTG 1 cut(s) 635
BbsI GAAGAC 1 cut(s) 825
BbvI GCAGC 2 cut(s) 877, 1167
BccI CCATC 5 cut(s) 100, 263, 718, 1029, 1103
BfaI CTAG 3 cut(s) 159, 320, 609
BfmI CTRYAG 1 cut(s) 985
BglII AGATCT 1 cut(s) 841
BisI GCNGC 3 cut(s) 755, 891, 1181
BlsI GCNGC 3 cut(s) 756, 892, 1182
Bme18I GGWCC 1 cut(s) 392
BmeT110I CYCGRG 1 cut(s) 522
BmgT120I GGNCC 1 cut(s) 392
BmsI GCATC 4 cut(s) 187, 463, 562, 689
BpiI GAAGAC 1 cut(s) 825
BsaAI YACGTR 1 cut(s) 635
BsaJI CCNNGG 1 cut(s) 375
Bsc4I CCNNNNNNNGG 1 cut(s) 227
Bse1I ACTGG 1 cut(s) 394
Bse3DI GCAATG 1 cut(s) 1059
BseDI CCNNGG 1 cut(s) 375
BseGI GGATG 2 cut(s) 50, 1040
BseLI CCNNNNNNNGG 1 cut(s) 227
BseMI GCAATG 1 cut(s) 1059
BseMII CTCAG 1 cut(s) 354
BseNI ACTGG 1 cut(s) 394
BseRI GAGGAG 1 cut(s) 54
BseXI GCAGC 2 cut(s) 877, 1167
BseYI CCCAGC 2 cut(s) 504, 776
BsgI GTGCAG 1 cut(s) 690
BshFI GGCC 3 cut(s) 709, 836, 1157
BsiHKCI CYCGRG 1 cut(s) 522
BslFI GGGAC 1 cut(s) 400
BslI CCNNNNNNNGG 1 cut(s) 227
BsmFI GGGAC 1 cut(s) 400
BsnI GGCC 3 cut(s) 709, 836, 1157
BsoBI CYCGRG 1 cut(s) 522
Bsp1286I GDGCHC 1 cut(s) 511
Bsp1407I TGTACA 1 cut(s) 992
Bsp143I GATC 5 cut(s) 100, 698, 800, 841, 936
BspACI CCGC 1 cut(s) 755
BspANI GGCC 3 cut(s) 709, 836, 1157
BspCNI CTCAG 1 cut(s) 355
BspPI GGATC 2 cut(s) 706, 944
BsrDI GCAATG 1 cut(s) 1059
BsrGI TGTACA 1 cut(s) 992
BsrI ACTGG 1 cut(s) 394
BssECI CCNNGG 1 cut(s) 375
BssMI GATC 5 cut(s) 100, 698, 800, 841, 936
BssNAI GTATAC 1 cut(s) 529
BssT1I CCWWGG 1 cut(s) 375
Bst1107I GTATAC 1 cut(s) 529
Bst4CI ACNGT 4 cut(s) 250, 351, 486, 824
Bst6I CTCTTC 1 cut(s) 143
BstAUI TGTACA 1 cut(s) 992
BstBAI YACGTR 1 cut(s) 635
BstC8I GCNNGC 1 cut(s) 1185
BstDEI CTNAG 2 cut(s) 74, 363
BstENI CCTNNNNNAGG 1 cut(s) 225
BstF5I GGATG 2 cut(s) 50, 1040
BstHHI GCGC 1 cut(s) 292
BstKTI GATC 5 cut(s) 103, 701, 803, 844, 939
BstMBI GATC 5 cut(s) 100, 698, 800, 841, 936
BstMWI GCNNNNNNNGC 5 cut(s) 406, 614, 650, 677, 760
BstSFI CTRYAG 1 cut(s) 985
BstV1I GCAGC 2 cut(s) 877, 1167
BstV2I GAAGAC 1 cut(s) 825
BstX2I RGATCY 2 cut(s) 698, 841
BstYI RGATCY 2 cut(s) 698, 841
BstZ17I GTATAC 1 cut(s) 529
BsuRI GGCC 3 cut(s) 709, 836, 1157
BtsCI GGATG 2 cut(s) 50, 1040
BtsIMutI CAGTG 2 cut(s) 255, 482
Cac8I GCNNGC 1 cut(s) 1185
CaiI CAGNNNCTG 1 cut(s) 389
CfoI GCGC 1 cut(s) 292
Cfr13I GGNCC 1 cut(s) 392
Csp6I GTAC 4 cut(s) 825, 949, 993, 1173
CviAII CATG 5 cut(s) 461, 927, 976, 1128, 1153
CviQI GTAC 4 cut(s) 825, 949, 993, 1173
DdeI CTNAG 2 cut(s) 74, 363
DpnI GATC 5 cut(s) 102, 700, 802, 843, 938
DpnII GATC 5 cut(s) 100, 698, 800, 841, 936
EaeI YGGCCR 1 cut(s) 834
Eam1104I CTCTTC 1 cut(s) 143
EarI CTCTTC 1 cut(s) 143
Eco130I CCWWGG 1 cut(s) 375
Eco24I GRGCYC 1 cut(s) 511
Eco47I GGWCC 1 cut(s) 392
Eco57I CTGAAG 1 cut(s) 831
Eco72I CACGTG 1 cut(s) 635
Eco88I CYCGRG 1 cut(s) 522
EcoNI CCTNNNNNAGG 1 cut(s) 225
EcoT14I CCWWGG 1 cut(s) 375
EcoT38I GRGCYC 1 cut(s) 511
ErhI CCWWGG 1 cut(s) 375
FaeI CATG 5 cut(s) 464, 930, 979, 1131, 1156
FaqI GGGAC 1 cut(s) 400
FatI CATG 5 cut(s) 460, 926, 975, 1127, 1152
FblI GTMKAC 1 cut(s) 528
Fnu4HI GCNGC 3 cut(s) 755, 891, 1181
FokI GGATG 2 cut(s) 37, 1047
FriOI GRGCYC 1 cut(s) 511
Fsp4HI GCNGC 3 cut(s) 755, 891, 1181
FspBI CTAG 3 cut(s) 159, 320, 609
GlaI GCGC 1 cut(s) 291
GluI GCNGC 3 cut(s) 755, 891, 1181
GsaI CCCAGC 2 cut(s) 508, 780
HaeIII GGCC 3 cut(s) 709, 836, 1157
HhaI GCGC 1 cut(s) 292
Hin1II CATG 5 cut(s) 464, 930, 979, 1131, 1156
Hin6I GCGC 1 cut(s) 290
HinP1I GCGC 1 cut(s) 290
HincII GTYRAC 2 cut(s) 415, 1134
HindII GTYRAC 2 cut(s) 415, 1134
HinfI GANTC 1 cut(s) 188
HphI GGTGA 3 cut(s) 289, 1066, 1204
Hpy166II GTNNAC 5 cut(s) 415, 489, 529, 733, 1134
Hpy188I TCNGA 3 cut(s) 105, 313, 919
Hpy188III TCNNGA 3 cut(s) 320, 329, 696
Hpy8I GTNNAC 5 cut(s) 415, 489, 529, 733, 1134
HpyAV CCTTC 5 cut(s) 10, 143, 365, 866, 1108
HpyCH4III ACNGT 4 cut(s) 250, 351, 486, 824
HpyCH4IV ACGT 1 cut(s) 634
HpyCH4V TGCA 2 cut(s) 409, 671
HpyF10VI GCNNNNNNNGC 5 cut(s) 406, 614, 650, 677, 760
HpyF3I CTNAG 2 cut(s) 74, 363
HpySE526I ACGT 1 cut(s) 634
Hsp92II CATG 5 cut(s) 464, 930, 979, 1131, 1156
HspAI GCGC 1 cut(s) 290
Kzo9I GATC 5 cut(s) 100, 698, 800, 841, 936
LmnI GCTCC 1 cut(s) 272
Lsp1109I GCAGC 2 cut(s) 877, 1167
LweI GCATC 4 cut(s) 187, 463, 562, 689
MaeI CTAG 3 cut(s) 159, 320, 609
MaeII ACGT 1 cut(s) 634
MaeIII GTNAC 2 cut(s) 295, 1210
MalI GATC 5 cut(s) 102, 700, 802, 843, 938
MboI GATC 5 cut(s) 100, 698, 800, 841, 936
MboII GAAGA 3 cut(s) 130, 243, 830
MfeI CAATTG 3 cut(s) 441, 499, 1074
MflI RGATCY 2 cut(s) 698, 841
MhlI GDGCHC 1 cut(s) 511
MlsI TGGCCA 1 cut(s) 836
MluNI TGGCCA 1 cut(s) 836
MmeI TCCRAC 1 cut(s) 1077
MnlI CCTC 6 cut(s) 27, 64, 75, 373, 487, 586
Mox20I TGGCCA 1 cut(s) 836
MscI TGGCCA 1 cut(s) 836
MseI TTAA 2 cut(s) 45, 237
Msp20I TGGCCA 1 cut(s) 836
MspA1I CMGCKG 3 cut(s) 362, 617, 990
MunI CAATTG 3 cut(s) 441, 499, 1074
MwoI GCNNNNNNNGC 5 cut(s) 406, 614, 650, 677, 760
NdeII GATC 5 cut(s) 100, 698, 800, 841, 936
NlaIII CATG 5 cut(s) 464, 930, 979, 1131, 1156
NmeAIII GCCGAG 1 cut(s) 361
NmuCI GTSAC 2 cut(s) 295, 1210
PfeI GAWTC 1 cut(s) 188
PkrI GCNGC 3 cut(s) 756, 892, 1182
PmaCI CACGTG 1 cut(s) 635
PmlI CACGTG 1 cut(s) 635
Ppu21I YACGTR 1 cut(s) 635
PspCI CACGTG 1 cut(s) 635
PspFI CCCAGC 2 cut(s) 504, 776
PspPI GGNCC 1 cut(s) 392
PstNI CAGNNNCTG 1 cut(s) 389
PsuI RGATCY 2 cut(s) 698, 841
PvuII CAGCTG 3 cut(s) 362, 617, 990
RsaI GTAC 4 cut(s) 826, 950, 994, 1174
RsaNI GTAC 4 cut(s) 825, 949, 993, 1173
SaqAI TTAA 2 cut(s) 45, 237
SatI GCNGC 3 cut(s) 755, 891, 1181
Sau3AI GATC 5 cut(s) 100, 698, 800, 841, 936
Sau96I GGNCC 1 cut(s) 392
SduI GDGCHC 1 cut(s) 511
SfaNI GCATC 4 cut(s) 187, 463, 562, 689
SfcI CTRYAG 1 cut(s) 985
SinI GGWCC 1 cut(s) 392
SsiI CCGC 1 cut(s) 755
SspI AATATT 1 cut(s) 1084
SspMI CTAG 3 cut(s) 159, 320, 609
StyI CCWWGG 1 cut(s) 375
TaaI ACNGT 4 cut(s) 250, 351, 486, 824
TaiI ACGT 1 cut(s) 637
TaqI TCGA 5 cut(s) 99, 255, 423, 675, 683
TatI WGTACW 3 cut(s) 948, 992, 1172
TauI GCSGC 1 cut(s) 757
TfiI GAWTC 1 cut(s) 188
Tru1I TTAA 2 cut(s) 45, 237
Tru9I TTAA 2 cut(s) 45, 237
TscAI CASTG 2 cut(s) 255, 489
TseFI GTSAC 2 cut(s) 295, 1210
TseI GCWGC 2 cut(s) 890, 1180
Tsp45I GTSAC 2 cut(s) 295, 1210
TspDTI ATGAA 5 cut(s) 29, 484, 936, 1035, 1154
TspGWI ACGGA 1 cut(s) 1002
TspRI CASTG 2 cut(s) 255, 489
VpaK11BI GGWCC 1 cut(s) 392
XagI CCTNNNNNAGG 1 cut(s) 225
XapI RAATTY 4 cut(s) 79, 278, 769, 863
XbaI TCTAGA 1 cut(s) 319
XmiI GTMKAC 1 cut(s) 528
XspI CTAG 3 cut(s) 159, 320, 609
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.