MD05G1218800.v1.1

BAHD acyltransferase At5g47980-like

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Reverse (-)
34934945 .. 34935469
525 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1218800.v1.1.491

Sequence Viewer

Length: 525 bp
ATGGAAGCATCGAGATCAAACTTGGGTGTTGTAAGGCCATCTGAGTTGTCTCAATTTGTGAACATTCGGAAAATATTGGTGTCGCCTTTGGCAGAAAACTTGTTGGGGAATCTTGTGGGGCTCTGTGTAGCAAAGACCGAAGCAAGTGAAGTAGACGACGTTCAAAGCTTGGTGACTAAATTCAGGAAAGAGATGGAGGAATTTAAAGTAGGATATGGAAAAGGAATTAGCGGGGAGGAAGCGTGTGAGTTCTACAAAGAGTATGGACACCTTATGAAAAGGGATGTGGACAACTACAACTGCATCAGTTGGTGCAGATTTCCTTTTTATGAAGCTGATTTCGGATGGGGAAAGCCGTTATGGGTGCCTCACATTGGAGGACTGAAGAATCTAATTCTATTGATGGACACAAGAGATGGCGAAGGCATAGAAGCATCCTTGACTCTCAAGGAAGAAGATATGGCTAAATTTGAAAGCAATAAGGAGCTTCTTTCGTATGCATCTGTGAATCCGCCTGTCATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

175

Amino Acids

19.59

Weight (kDa)

4.98

Isoelectric Point (pI)

46.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 8 - 163 3.3e-24 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000200)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G24420 AT1G24420
fragaria_vesca FvH4_3g15900 FvH4_3g15901 FvH4_3g15902 FvH4_3g15903 FvH4_3g15910 FvH4_3g16350 FvH4_3g16950 FvH4_3g17000 FvH4_3g17010 FvH4_3g35170 FvH4_4g17550
malus_domestica MD02G1273000.v1.1 MD03G1110800.v1.1 MD05G1218500.v1.1 MD05G1218600.v1.1 MD05G1218800.v1.1 MD05G1218900.v1.1 MD05G1219000.v1.1 MD09G1267700.v1.1 MD10G1199600.v1.1 MD10G1199700.v1.1 MD10G1200000.v1.1 MD10G1200100.v1.1 MD10G1200300.v1.1 MD10G1201000.v1.1 MD11G1116900.v1.1 MD11G1117000.v1.1 MD11G1275900.v1.1 MD13G1109500.v1.1 MD14G1011700.v1.1 MD14G1015400.v1.1 MD14G1015500.v1.1
prunus_persica Prupe.4G140700_v2.0.a1 Prupe.4G140800_v2.0.a1 Prupe.4G141500_v2.0.a1
pyrus_communis pycom02g23390 pycom05g19930 pycom05g19940 pycom05g19970 pycom05g19980 pycom05g19990 pycom05g20000 pycom05g20020 pycom10g17190 pycom10g17200 pycom10g17210 pycom10g17220 pycom10g24650 pycom11g24430 pycom14g01050 pycom14g01330 pycom16g06450
rosa_chinensis RchiOBHm_Chr4g0391831 RchiOBHm_Chr4g0391841 RchiOBHm_Chr4g0407921 RchiOBHm_Chr4g0408021 RchiOBHm_Chr4g0412981 RchiOBHm_Chr4g0415601 RchiOBHm_Chr4g0415621 RchiOBHm_Chr4g0421461 RchiOBHm_Chr4g0431781 RchiOBHm_Chr5g0026651 RchiOBHm_Chr5g0026721 RchiOBHm_Chr5g0026731 RchiOBHm_Chr5g0026741 RchiOBHm_Chr5g0026751 RchiOBHm_Chr5g0026821 RchiOBHm_Chr5g0028341
rosa_laevigata RLG00000006890 RLG00000007680 RLG00000007682 RLG00000008056 RLG00000008057 RLG00000008058 RLG00000008060 RLG00000008681 RLG00000032943 RLG00000032951 RLG00000032955 RLG00000032956 RLG00000032957 RLG00000032958 RLG00000032961 RLG00000033083 RLG00000033084
rosa_multiflora Rmu_co7991326.1_g000001 Rmu_co8439139.1_g000001 Rmu_co8448401.1_g000001 Rmu_sc0001194.1_g000015 Rmu_sc0001962.1_g000015 Rmu_sc0002073.1_g000012 Rmu_sc0004490.1_g000006 Rmu_sc0004599.1_g000009 Rmu_sc0004805.1_g000044 Rmu_sc0008526.1_g000001 Rmu_ssc0000172.1_g000021 Rmu_ssc0000172.1_g000031 Rmu_ssc0000172.1_g000032
rosa_roxburghii Rroxscaffold_1G00051360 Rroxscaffold_1G00051390 Rroxscaffold_1G00052710 Rroxscaffold_1G00052750 Rroxscaffold_1G00052810 Rroxscaffold_1G00052820 Rroxscaffold_4G00321060 Rroxscaffold_4G00321070 Rroxscaffold_5G00352550 Rroxscaffold_5G00359410
rosa_rugosa Rorug01G0079700 Rorug01G0080700 Rorug04G0083200 Rorug04G0083400 Rorug04G0135400 Rorug04G0135500.1 Rorug04G0135900 Rorug04G0171400 Rorug04G0252300 Rorug05G0095200 Rorug05G0095300 Rorug05G0095400 Rorug05G0402400
rosa_samantha Rh1DG103500 Rh4AG176900 Rh4AG196400 Rh4AG232100 Rh4AG308800 Rh4DG141600 Rh4DG194000 Rh4DG194100 Rh4DG194300 Rh4DG230600 Rh5AG177800 Rh5AG188100 Rh5AG188800 Rh5AG188900 Rh5AG199400 Rh5DG187300 Rh5DG187400 Rh5DG188000 Rh5DG199900
rosa_wichuraiana Rw0G018630 Rw1G007730 Rw4G012100 Rw4G016700 Rw4G020190 Rw5G016100 Rw5G017090 Rw5G017100 Rw5G017110 Rw5G018170 Rw5G018180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 364
AccI GTMKAC 1 cut(s) 153
AciI CCGC 2 cut(s) 231, 512
AcsI RAATTY 3 cut(s) 179, 200, 467
AcuI CTGAAG 1 cut(s) 404
AfiI CCNNNNNNNGG 1 cut(s) 374
AgsI TTSAA 2 cut(s) 164, 473
AluBI AGCT 3 cut(s) 168, 335, 487
AluI AGCT 3 cut(s) 168, 335, 487
Alw26I GTCTC 1 cut(s) 54
AoxI GGCC 1 cut(s) 35
ApoI RAATTY 3 cut(s) 179, 200, 467
AsuHPI GGTGA 1 cut(s) 184
BanI GGYRCC 1 cut(s) 364
BanII GRGCYC 1 cut(s) 123
BccI CCATC 5 cut(s) 46, 187, 339, 397, 410
BceAI ACGGC 1 cut(s) 340
BcoDI GTCTC 1 cut(s) 54
BmiI GGNNCC 1 cut(s) 366
BmsI GCATC 4 cut(s) 17, 312, 443, 509
BpuEI CTTGAG 1 cut(s) 431
BsaXI ACNNNNNCTCC 2 cut(s) 227, 257
Bsc4I CCNNNNNNNGG 1 cut(s) 374
BseGI GGATG 3 cut(s) 289, 350, 434
BseLI CCNNNNNNNGG 1 cut(s) 374
BseMII CTCAG 1 cut(s) 33
BsgI GTGCAG 1 cut(s) 334
BshFI GGCC 1 cut(s) 37
BshNI GGYRCC 1 cut(s) 364
BslI CCNNNNNNNGG 1 cut(s) 374
BsmAI GTCTC 1 cut(s) 54
BsnI GGCC 1 cut(s) 37
Bsp1286I GDGCHC 1 cut(s) 123
Bsp143I GATC 1 cut(s) 14
BspACI CCGC 2 cut(s) 231, 512
BspANI GGCC 1 cut(s) 37
BspCNI CTCAG 1 cut(s) 34
BspLI GGNNCC 1 cut(s) 366
BspT107I GGYRCC 1 cut(s) 364
BssMI GATC 1 cut(s) 14
BstDEI CTNAG 1 cut(s) 42
BstF5I GGATG 3 cut(s) 289, 350, 434
BstKTI GATC 1 cut(s) 17
BstMAI GTCTC 1 cut(s) 54
BstMBI GATC 1 cut(s) 14
BsuRI GGCC 1 cut(s) 37
BtsCI GGATG 3 cut(s) 289, 350, 434
CviJI RGCY 7 cut(s) 37, 121, 168, 335, 355, 464, 487
CviKI_1 RGCY 7 cut(s) 37, 121, 168, 335, 355, 464, 487
DdeI CTNAG 1 cut(s) 42
DpnI GATC 1 cut(s) 16
DpnII GATC 1 cut(s) 14
DraI TTTAAA 1 cut(s) 205
EciI GGCGGA 1 cut(s) 501
Eco24I GRGCYC 1 cut(s) 123
Eco57I CTGAAG 1 cut(s) 404
EcoT22I ATGCAT 1 cut(s) 502
EcoT38I GRGCYC 1 cut(s) 123
FaiI YATR 8 cut(s) 216, 264, 275, 330, 361, 428, 461, 498
FauI CCCGC 1 cut(s) 224
FblI GTMKAC 1 cut(s) 153
FokI GGATG 3 cut(s) 296, 357, 421
FriOI GRGCYC 1 cut(s) 123
HaeIII GGCC 1 cut(s) 37
HindIII AAGCTT 1 cut(s) 166
HinfI GANTC 4 cut(s) 109, 388, 442, 508
HphI GGTGA 1 cut(s) 184
Hpy166II GTNNAC 3 cut(s) 61, 154, 289
Hpy188I TCNGA 3 cut(s) 43, 69, 344
Hpy188III TCNNGA 2 cut(s) 12, 184
Hpy8I GTNNAC 3 cut(s) 61, 154, 289
Hpy99I CGWCG 1 cut(s) 161
HpyAV CCTTC 1 cut(s) 416
HpyCH4IV ACGT 1 cut(s) 159
HpyCH4V TGCA 3 cut(s) 303, 315, 500
HpyF3I CTNAG 1 cut(s) 42
HpySE526I ACGT 1 cut(s) 159
Kzo9I GATC 1 cut(s) 14
LmnI GCTCC 1 cut(s) 484
LpnPI CCDG 1 cut(s) 169
LweI GCATC 4 cut(s) 17, 312, 443, 509
MaeII ACGT 1 cut(s) 159
MaeIII GTNAC 1 cut(s) 172
MalI GATC 1 cut(s) 16
MboI GATC 1 cut(s) 14
MboII GAAGA 3 cut(s) 397, 464, 467
MhlI GDGCHC 1 cut(s) 123
MluCI AATT 6 cut(s) 53, 179, 200, 225, 393, 467
MlyI GAGTC 1 cut(s) 436
MnlI CCTC 4 cut(s) 190, 229, 371, 378
Mph1103I ATGCAT 1 cut(s) 502
MseI TTAA 2 cut(s) 204, 523
NdeII GATC 1 cut(s) 14
NlaIV GGNNCC 1 cut(s) 366
NmuCI GTSAC 1 cut(s) 172
NsiI ATGCAT 1 cut(s) 502
PfeI GAWTC 3 cut(s) 109, 388, 508
PleI GAGTC 1 cut(s) 436
PpsI GAGTC 1 cut(s) 436
PspN4I GGNNCC 1 cut(s) 366
PsrI GAACNNNNNNTAC 2 cut(s) 144, 176
SaqAI TTAA 2 cut(s) 204, 523
Sau3AI GATC 1 cut(s) 14
SchI GAGTC 1 cut(s) 436
SduI GDGCHC 1 cut(s) 123
SetI ASST 5 cut(s) 162, 170, 273, 337, 489
SfaNI GCATC 4 cut(s) 17, 312, 443, 509
SmlI CTYRAG 1 cut(s) 446
SmoI CTYRAG 1 cut(s) 446
Sse9I AATT 6 cut(s) 53, 179, 200, 225, 393, 467
SsiI CCGC 2 cut(s) 231, 512
SspI AATATT 1 cut(s) 75
TaiI ACGT 1 cut(s) 162
TaqI TCGA 1 cut(s) 11
TaqII GACCGA 1 cut(s) 152
TasI AATT 6 cut(s) 53, 179, 200, 225, 393, 467
TfiI GAWTC 3 cut(s) 109, 388, 508
Tru1I TTAA 2 cut(s) 204, 523
Tru9I TTAA 2 cut(s) 204, 523
TseFI GTSAC 1 cut(s) 172
Tsp45I GTSAC 1 cut(s) 172
TspDTI ATGAA 2 cut(s) 290, 345
XapI RAATTY 3 cut(s) 179, 200, 467
XmiI GTMKAC 1 cut(s) 153
Zsp2I ATGCAT 1 cut(s) 502
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.