Rh5DG187400

BAHD acyltransferase At5g47980-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
Physical Location & Seq
Forward (+)
20817286 .. 20819084
1799 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG187400.1

Sequence Viewer

Length: 1308 bp
ATGGATACACAGATGAAGGTTGAAATCATTGAGAGGAAAATAATTAAGCCATCCTCCCCAACTCCTCATCATCTTAGAAATTTTGAGCTGTCATTTTTCGATCAGATGGCAATTACAATTTACACTCCACTCCTTCTCTTCTTTCCAAATACTACTTCTAGTAAGCTTGAAATATGTGAGCATCTAGCAGAATCATTAGGTAAAACTCTCACTCACTTCTACCCTTTAGCAGGAAGAATTAAAGGTAATACAGTGGTCGAATGTAATGATGATGGAGCTGAATTTGTCAAAGCGAAAGTCACCTGTTCCTTATCAGATTTTCTAGAAAAACCAGAAGCCGAGATATTAGAACAGTTCCTTCCAGCTGAGATTTTATCCAAGGAGGCAGGGACTGGTCCTTTGCTTCTTGTGCAAGTCAACTTGTTCGAGTGTGGTGGAATGGCAATTGGGTTTAGCATTTCACATAAGATTGCTGATGCCTCCACACTGTCCACATTCATCAATTGCTGGGCTCAAGTAACAAATACAACCAGTACTGATAGTGAGGTAATGCTTCCAGAATTTGGTTCGGCATCTCTCTTTCCACCACAAGATTTCTCTAATGACTCACAGCCACCAGCCCGAGTATACTCCAAAAAGAACATCAATATAACAAGGAGGTATGTGTTTGATGCCTCAAACATTTCTGCTCTACAATCTAAAGTGGCTAGTTCAGCTGTGCCACAACCTACACGTGTAGAAGCGATTTCAGCACTCATTTGGAAATGTGCAGTCGAAGCATCGACATCAAAATCAGGATCTCAAAGGCCATCAGTGTTCAGCCAAGATGTGAACTTGCGTAAAAGGGTTGTGCCTCCCTTGCCTGAAAATTTTGCTGGGAATGTTGTAGGTTTTTATAGATCAAAGGCTGAAGTTGAAGACGGTACTATTGTGGCCATAGATCTAAAAGACTTGGTTTCTAAATTCAGGGAAGGGATTGAAAACTATGCTGCTATAACAAAAACCATATTTGGTTCTGATGAAGCATGGCAAGGGATCAAAGATAAGTACAAGAACCTGAAAAAAAGTGATGACGTGGAGTTCTACAGCTGCACAAGTTGGTGTAGGTTTCCTTTTTATGAAGCAGATTTTGGATGGGGAAAGCCAAAATGGGTGAGCATTGCTAGTGTTTCAATTGAAAATATTATTGTTTTGTTGGATAAGAATGGAATAGAAGCATGGTTGACTATGAACCAAGAAAACATGGCCTTATTTGAGAGCAGTACAGAGCTGCTTGCATATGCTTCTGTAAATCCAAGTGTTAGGTGA

Protein Analysis

435

Amino Acids

48.28

Weight (kDa)

5.31

Isoelectric Point (pI)

45.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 5 - 424 9.1e-96 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000200)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G24420 AT1G24420
fragaria_vesca FvH4_3g15900 FvH4_3g15901 FvH4_3g15902 FvH4_3g15903 FvH4_3g15910 FvH4_3g16350 FvH4_3g16950 FvH4_3g17000 FvH4_3g17010 FvH4_3g35170 FvH4_4g17550
malus_domestica MD02G1273000.v1.1 MD03G1110800.v1.1 MD05G1218500.v1.1 MD05G1218600.v1.1 MD05G1218800.v1.1 MD05G1218900.v1.1 MD05G1219000.v1.1 MD09G1267700.v1.1 MD10G1199600.v1.1 MD10G1199700.v1.1 MD10G1200000.v1.1 MD10G1200100.v1.1 MD10G1200300.v1.1 MD10G1201000.v1.1 MD11G1116900.v1.1 MD11G1117000.v1.1 MD11G1275900.v1.1 MD13G1109500.v1.1 MD14G1011700.v1.1 MD14G1015400.v1.1 MD14G1015500.v1.1
prunus_persica Prupe.4G140700_v2.0.a1 Prupe.4G140800_v2.0.a1 Prupe.4G141500_v2.0.a1
pyrus_communis pycom02g23390 pycom05g19930 pycom05g19940 pycom05g19970 pycom05g19980 pycom05g19990 pycom05g20000 pycom05g20020 pycom10g17190 pycom10g17200 pycom10g17210 pycom10g17220 pycom10g24650 pycom11g24430 pycom14g01050 pycom14g01330 pycom16g06450
rosa_chinensis RchiOBHm_Chr4g0391831 RchiOBHm_Chr4g0391841 RchiOBHm_Chr4g0407921 RchiOBHm_Chr4g0408021 RchiOBHm_Chr4g0412981 RchiOBHm_Chr4g0415601 RchiOBHm_Chr4g0415621 RchiOBHm_Chr4g0421461 RchiOBHm_Chr4g0431781 RchiOBHm_Chr5g0026651 RchiOBHm_Chr5g0026721 RchiOBHm_Chr5g0026731 RchiOBHm_Chr5g0026741 RchiOBHm_Chr5g0026751 RchiOBHm_Chr5g0026821 RchiOBHm_Chr5g0028341
rosa_laevigata RLG00000006890 RLG00000007680 RLG00000007682 RLG00000008056 RLG00000008057 RLG00000008058 RLG00000008060 RLG00000008681 RLG00000032943 RLG00000032951 RLG00000032955 RLG00000032956 RLG00000032957 RLG00000032958 RLG00000032961 RLG00000033083 RLG00000033084
rosa_multiflora Rmu_co7991326.1_g000001 Rmu_co8439139.1_g000001 Rmu_co8448401.1_g000001 Rmu_sc0001194.1_g000015 Rmu_sc0001962.1_g000015 Rmu_sc0002073.1_g000012 Rmu_sc0004490.1_g000006 Rmu_sc0004599.1_g000009 Rmu_sc0004805.1_g000044 Rmu_sc0008526.1_g000001 Rmu_ssc0000172.1_g000021 Rmu_ssc0000172.1_g000031 Rmu_ssc0000172.1_g000032
rosa_roxburghii Rroxscaffold_1G00051360 Rroxscaffold_1G00051390 Rroxscaffold_1G00052710 Rroxscaffold_1G00052750 Rroxscaffold_1G00052810 Rroxscaffold_1G00052820 Rroxscaffold_4G00321060 Rroxscaffold_4G00321070 Rroxscaffold_5G00352550 Rroxscaffold_5G00359410
rosa_rugosa Rorug01G0079700 Rorug01G0080700 Rorug04G0083200 Rorug04G0083400 Rorug04G0135400 Rorug04G0135500.1 Rorug04G0135900 Rorug04G0171400 Rorug04G0252300 Rorug05G0095200 Rorug05G0095300 Rorug05G0095400 Rorug05G0402400
rosa_samantha Rh1DG103500 Rh4AG176900 Rh4AG196400 Rh4AG232100 Rh4AG308800 Rh4DG141600 Rh4DG194000 Rh4DG194100 Rh4DG194300 Rh4DG230600 Rh5AG177800 Rh5AG188100 Rh5AG188800 Rh5AG188900 Rh5AG199400 Rh5DG187300 Rh5DG187400 Rh5DG188000 Rh5DG199900
rosa_wichuraiana Rw0G018630 Rw1G007730 Rw4G012100 Rw4G016700 Rw4G020190 Rw5G016100 Rw5G017090 Rw5G017100 Rw5G017110 Rw5G018170 Rw5G018180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 563
AccI GTMKAC 1 cut(s) 627
AclWI GGATC 2 cut(s) 805, 1043
AcoI YGGCCR 1 cut(s) 933
AcsI RAATTY 5 cut(s) 79, 281, 560, 868, 962
AcuI CTGAAG 1 cut(s) 930
AcvI CACGTG 1 cut(s) 734
AfaI GTAC 4 cut(s) 535, 925, 1049, 1264
AfiI CCNNNNNNNGG 2 cut(s) 230, 563
AflIII ACRYGT 2 cut(s) 731, 733
AgsI TTSAA 6 cut(s) 23, 170, 917, 980, 1173, 1178
AjiI CACGTC 1 cut(s) 1075
AjuI GAANNNNNNNTTGG 4 cut(s) 139, 171, 1113, 1145
AluBI AGCT 7 cut(s) 88, 166, 278, 365, 716, 1089, 1270
AluI AGCT 7 cut(s) 88, 166, 278, 365, 716, 1089, 1270
AlwI GGATC 2 cut(s) 805, 1043
AlwNI CAGNNNCTG 1 cut(s) 392
Ama87I CYCGRG 1 cut(s) 621
AoxI GGCC 3 cut(s) 806, 933, 1245
ApeKI GCWGC 3 cut(s) 989, 1089, 1270
ApoI RAATTY 5 cut(s) 79, 281, 560, 868, 962
ArsI GACNNNNNNTTYG 4 cut(s) 282, 314, 382, 414
AspS9I GGNCC 1 cut(s) 395
AsuHPI GGTGA 2 cut(s) 292, 1165
AvaI CYCGRG 1 cut(s) 621
AvaII GGWCC 1 cut(s) 395
BaeI ACNNNNGTAYC 2 cut(s) 915, 948
BalI TGGCCA 1 cut(s) 935
BanII GRGCYC 1 cut(s) 514
BbrPI CACGTG 1 cut(s) 734
BbsI GAAGAC 1 cut(s) 924
BbvI GCAGC 3 cut(s) 976, 1076, 1257
BccI CCATC 5 cut(s) 58, 100, 266, 817, 1128
BfaI CTAG 5 cut(s) 159, 185, 323, 708, 1164
BfmI CTRYAG 1 cut(s) 1084
BglII AGATCT 1 cut(s) 940
BisI GCNGC 3 cut(s) 990, 1090, 1271
BlsI GCNGC 3 cut(s) 991, 1091, 1272
BmcAI AGTACT 1 cut(s) 535
Bme18I GGWCC 1 cut(s) 395
BmeT110I CYCGRG 1 cut(s) 621
BmgBI CACGTC 1 cut(s) 1075
BmgT120I GGNCC 1 cut(s) 395
BmsI GCATC 5 cut(s) 190, 466, 581, 661, 788
BpiI GAAGAC 1 cut(s) 924
BpuEI CTTGAG 1 cut(s) 498
BsaAI YACGTR 1 cut(s) 734
BsaJI CCNNGG 1 cut(s) 378
Bsc4I CCNNNNNNNGG 2 cut(s) 230, 563
Bse1I ACTGG 2 cut(s) 397, 531
Bse3DI GCAATG 1 cut(s) 1158
BseDI CCNNGG 1 cut(s) 378
BseGI GGATG 2 cut(s) 50, 1139
BseLI CCNNNNNNNGG 2 cut(s) 230, 563
BseMI GCAATG 1 cut(s) 1158
BseMII CTCAG 1 cut(s) 357
BseNI ACTGG 2 cut(s) 397, 531
BseRI GAGGAG 1 cut(s) 54
BseXI GCAGC 3 cut(s) 976, 1076, 1257
BseYI CCCAGC 2 cut(s) 507, 875
BsgI GTGCAG 2 cut(s) 789, 1075
BshFI GGCC 3 cut(s) 808, 935, 1247
BsiHKCI CYCGRG 1 cut(s) 621
BslFI GGGAC 1 cut(s) 403
BslI CCNNNNNNNGG 2 cut(s) 230, 563
BsmFI GGGAC 1 cut(s) 403
BsnI GGCC 3 cut(s) 808, 935, 1247
BsoBI CYCGRG 1 cut(s) 621
Bsp1286I GDGCHC 1 cut(s) 514
Bsp143I GATC 5 cut(s) 100, 797, 899, 940, 1035
BspANI GGCC 3 cut(s) 808, 935, 1247
BspCNI CTCAG 1 cut(s) 358
BspPI GGATC 2 cut(s) 805, 1043
BsrDI GCAATG 1 cut(s) 1158
BsrI ACTGG 2 cut(s) 397, 531
BssECI CCNNGG 1 cut(s) 378
BssMI GATC 5 cut(s) 100, 797, 899, 940, 1035
BssNAI GTATAC 1 cut(s) 628
BssT1I CCWWGG 1 cut(s) 378
Bst1107I GTATAC 1 cut(s) 628
Bst4CI ACNGT 4 cut(s) 253, 354, 489, 923
Bst6I CTCTTC 1 cut(s) 143
BstBAI YACGTR 1 cut(s) 734
BstC8I GCNNGC 1 cut(s) 1275
BstDEI CTNAG 2 cut(s) 74, 366
BstENI CCTNNNNNAGG 1 cut(s) 228
BstF5I GGATG 2 cut(s) 50, 1139
BstKTI GATC 5 cut(s) 103, 800, 902, 943, 1038
BstMBI GATC 5 cut(s) 100, 797, 899, 940, 1035
BstMWI GCNNNNNNNGC 5 cut(s) 409, 713, 749, 776, 859
BstSFI CTRYAG 1 cut(s) 1084
BstV1I GCAGC 3 cut(s) 976, 1076, 1257
BstV2I GAAGAC 1 cut(s) 924
BstX2I RGATCY 2 cut(s) 797, 940
BstYI RGATCY 2 cut(s) 797, 940
BstZ17I GTATAC 1 cut(s) 628
BsuRI GGCC 3 cut(s) 808, 935, 1247
BtrI CACGTC 1 cut(s) 1075
BtsCI GGATG 2 cut(s) 50, 1139
BtsIMutI CAGTG 3 cut(s) 258, 485, 819
Cac8I GCNNGC 1 cut(s) 1275
CaiI CAGNNNCTG 1 cut(s) 392
Cfr13I GGNCC 1 cut(s) 395
Csp6I GTAC 4 cut(s) 534, 924, 1048, 1263
CviAII CATG 3 cut(s) 1026, 1218, 1243
CviQI GTAC 4 cut(s) 534, 924, 1048, 1263
DdeI CTNAG 2 cut(s) 74, 366
DpnI GATC 5 cut(s) 102, 799, 901, 942, 1037
DpnII GATC 5 cut(s) 100, 797, 899, 940, 1035
EaeI YGGCCR 1 cut(s) 933
Eam1104I CTCTTC 1 cut(s) 143
EarI CTCTTC 1 cut(s) 143
Eco130I CCWWGG 1 cut(s) 378
Eco24I GRGCYC 1 cut(s) 514
Eco47I GGWCC 1 cut(s) 395
Eco57I CTGAAG 1 cut(s) 930
Eco72I CACGTG 1 cut(s) 734
Eco88I CYCGRG 1 cut(s) 621
EcoNI CCTNNNNNAGG 1 cut(s) 228
EcoT14I CCWWGG 1 cut(s) 378
EcoT38I GRGCYC 1 cut(s) 514
ErhI CCWWGG 1 cut(s) 378
FaeI CATG 3 cut(s) 1029, 1221, 1246
FaqI GGGAC 1 cut(s) 403
FatI CATG 3 cut(s) 1025, 1217, 1242
FauNDI CATATG 1 cut(s) 1279
FblI GTMKAC 1 cut(s) 627
Fnu4HI GCNGC 3 cut(s) 990, 1090, 1271
FokI GGATG 2 cut(s) 37, 1146
FriOI GRGCYC 1 cut(s) 514
Fsp4HI GCNGC 3 cut(s) 990, 1090, 1271
FspBI CTAG 5 cut(s) 159, 185, 323, 708, 1164
GluI GCNGC 3 cut(s) 990, 1090, 1271
GsaI CCCAGC 2 cut(s) 511, 879
HaeIII GGCC 3 cut(s) 808, 935, 1247
Hin1II CATG 3 cut(s) 1029, 1221, 1246
HincII GTYRAC 2 cut(s) 418, 1224
HindII GTYRAC 2 cut(s) 418, 1224
HindIII AAGCTT 1 cut(s) 164
HinfI GANTC 2 cut(s) 191, 605
HphI GGTGA 2 cut(s) 292, 1165
Hpy166II GTNNAC 5 cut(s) 418, 492, 628, 832, 1224
Hpy188I TCNGA 3 cut(s) 105, 316, 1018
Hpy188III TCNNGA 3 cut(s) 323, 557, 795
Hpy8I GTNNAC 5 cut(s) 418, 492, 628, 832, 1224
HpyAV CCTTC 4 cut(s) 10, 143, 368, 965
HpyCH4III ACNGT 4 cut(s) 253, 354, 489, 923
HpyCH4IV ACGT 2 cut(s) 733, 1074
HpyCH4V TGCA 4 cut(s) 412, 770, 1092, 1277
HpyF10VI GCNNNNNNNGC 5 cut(s) 409, 713, 749, 776, 859
HpyF3I CTNAG 2 cut(s) 74, 366
HpySE526I ACGT 2 cut(s) 733, 1074
Hsp92II CATG 3 cut(s) 1029, 1221, 1246
Kzo9I GATC 5 cut(s) 100, 797, 899, 940, 1035
LmnI GCTCC 1 cut(s) 275
Lsp1109I GCAGC 3 cut(s) 976, 1076, 1257
LweI GCATC 5 cut(s) 190, 466, 581, 661, 788
MaeI CTAG 5 cut(s) 159, 185, 323, 708, 1164
MaeII ACGT 2 cut(s) 733, 1074
MaeIII GTNAC 2 cut(s) 298, 517
MalI GATC 5 cut(s) 102, 799, 901, 942, 1037
MboI GATC 5 cut(s) 100, 797, 899, 940, 1035
MboII GAAGA 3 cut(s) 130, 246, 929
MfeI CAATTG 3 cut(s) 444, 502, 1173
MflI RGATCY 2 cut(s) 797, 940
MhlI GDGCHC 1 cut(s) 514
MlsI TGGCCA 1 cut(s) 935
MluNI TGGCCA 1 cut(s) 935
MlyI GAGTC 1 cut(s) 599
MmeI TCCRAC 1 cut(s) 1176
MnlI CCTC 9 cut(s) 27, 64, 75, 376, 490, 538, 651, 685, 864
Mox20I TGGCCA 1 cut(s) 935
MscI TGGCCA 1 cut(s) 935
MseI TTAA 2 cut(s) 45, 240
Msp20I TGGCCA 1 cut(s) 935
MspA1I CMGCKG 3 cut(s) 365, 716, 1089
MunI CAATTG 3 cut(s) 444, 502, 1173
MwoI GCNNNNNNNGC 5 cut(s) 409, 713, 749, 776, 859
NdeI CATATG 1 cut(s) 1279
NdeII GATC 5 cut(s) 100, 797, 899, 940, 1035
NlaIII CATG 3 cut(s) 1029, 1221, 1246
NmeAIII GCCGAG 1 cut(s) 364
NmuCI GTSAC 1 cut(s) 298
PfeI GAWTC 1 cut(s) 191
PflMI CCANNNNNTGG 1 cut(s) 563
PkrI GCNGC 3 cut(s) 991, 1091, 1272
PleI GAGTC 1 cut(s) 599
PmaCI CACGTG 1 cut(s) 734
PmlI CACGTG 1 cut(s) 734
PpsI GAGTC 1 cut(s) 599
Ppu21I YACGTR 1 cut(s) 734
PspCI CACGTG 1 cut(s) 734
PspFI CCCAGC 2 cut(s) 507, 875
PspPI GGNCC 1 cut(s) 395
PstNI CAGNNNCTG 1 cut(s) 392
PsuI RGATCY 2 cut(s) 797, 940
PvuII CAGCTG 3 cut(s) 365, 716, 1089
RsaI GTAC 4 cut(s) 535, 925, 1049, 1264
RsaNI GTAC 4 cut(s) 534, 924, 1048, 1263
SaqAI TTAA 2 cut(s) 45, 240
SatI GCNGC 3 cut(s) 990, 1090, 1271
Sau3AI GATC 5 cut(s) 100, 797, 899, 940, 1035
Sau96I GGNCC 1 cut(s) 395
ScaI AGTACT 1 cut(s) 535
SchI GAGTC 1 cut(s) 599
SduI GDGCHC 1 cut(s) 514
SfaNI GCATC 5 cut(s) 190, 466, 581, 661, 788
SfcI CTRYAG 1 cut(s) 1084
SinI GGWCC 1 cut(s) 395
SmlI CTYRAG 1 cut(s) 513
SmoI CTYRAG 1 cut(s) 513
SspI AATATT 1 cut(s) 1183
SspMI CTAG 5 cut(s) 159, 185, 323, 708, 1164
StyI CCWWGG 1 cut(s) 378
TaaI ACNGT 4 cut(s) 253, 354, 489, 923
TaiI ACGT 2 cut(s) 736, 1077
TaqI TCGA 5 cut(s) 99, 258, 426, 774, 782
TatI WGTACW 3 cut(s) 533, 1047, 1262
TfiI GAWTC 1 cut(s) 191
Tru1I TTAA 2 cut(s) 45, 240
Tru9I TTAA 2 cut(s) 45, 240
TscAI CASTG 3 cut(s) 258, 492, 819
TseFI GTSAC 1 cut(s) 298
TseI GCWGC 3 cut(s) 989, 1089, 1270
Tsp45I GTSAC 1 cut(s) 298
TspDTI ATGAA 5 cut(s) 29, 487, 1035, 1134, 1244
TspRI CASTG 3 cut(s) 258, 492, 819
Van91I CCANNNNNTGG 1 cut(s) 563
VpaK11BI GGWCC 1 cut(s) 395
XagI CCTNNNNNAGG 1 cut(s) 228
XapI RAATTY 5 cut(s) 79, 281, 560, 868, 962
XbaI TCTAGA 1 cut(s) 322
XmiI GTMKAC 1 cut(s) 627
XspI CTAG 5 cut(s) 159, 185, 323, 708, 1164
ZrmI AGTACT 1 cut(s) 535
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.