Rroxscaffold_1G00052730

BAHD acyltransferase At5g47980-like

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Reverse (-)
73487373 .. 73498513
11141 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00052730.1

Sequence Viewer

Length: 2865 bp
ATGGACACACAGATGAAAGTTGAAATCATTGAGAGGAAAATAATTAAGCCATCCTCCCCAACTCCTCATCATCTCAGAAATTTTGAGCTGTCATTTTTCGATCAGATGGCAATTACAATTTACACTCCACTCCTTCTCTTCTTTCCAAATACTACTTCTAGTAAGCTTGAAATATGTGAGCATCTAACAGAATCATTAGGTAAAACTCTCACTCACTTCTACCCTTTAGCAGGAAGAATTAAAGGTAATACAGTGGTCGAATGTAATGATGATGGAGCTGAATTTGTCAAAGCGCAAGTCACCTGTTCCTTAGCAGATTTTCTAGAAAATCCAGACATCGAGATATTAGAACAGTTCCTTCCAGCTGAGATTTTGTCAAAGGAGGCAGGGACTGGTCCTTTGCTTCTTGTGCAAGTCAACTTGGTCGAGTGTGGTGGAATGGCAATTGGGTTTAGCATTTCACATAAGATTGCAGATGCCTCCACACTGTCCACATTCATCAATTGCTGGGCTCAAGTAACAAATACAACCAGTACTGATAGTGAGGTAAAGCTTCCAGAATTTGGTTCGGCATCTCTCTTTCCACCACAAGATTTCTCTAATGACTCCTCACAGCCACCAGCCCGAGTATACTCCAAAAAGAACATCAATATAACAAGGAGGTATGTGTTTGATGCCTCAAACATTTCTGCTCTACAATCTAAAGTGGCTAGTTCAGCTGTGCCACAACCTACACGTGTAGAAGCGATTTCAGCACTCATTTGGAAATGTGCAGTCGAAGCATCGACATCAAAATCAGGATCTCAAAGGCCATCAGTGTTCAGCCAAGATGTGAACTTGCGTAAAAGGGTTGTGCCGCCCTTGCCTGAAAATTTTGCTGGGAATGTTGTAGGTTTTTATAGATCAAAGGCTGAAGTTGAAGACGGTACTATTGTGGCCATAGATCTAAAAGACTTGGTTTCTAAATTCAGGGAAGGGATTGAAAACTACGCTGCTATAACAAAAACCATATTTGGTTCTGATGAAGCATGGCAAGGGATCAAAGATAAGTACAAGAACCTGAAAAAAAGTGATGACATGGAGTTCTACAGCTGTACAAGTTGGTGTAGGTTTCCTTTTTATGAAGCAGATTTTGGATGGGGAAAGCCAAAATGGGTGACCATTGCTAGTGTTTCAGTTGAAAATATTATTGTTTTGTTGGATAAAAGAGATGGGAATGGAATAGAAGCATGGTTGACCATGAACCAAGAAAACATGGCCTTATTTGAGAGCAGTACAGAGCTGCTTGCATATGCTTCTGAGGCTTCTTTCTGTTTACGATGGCACTATGATTCTATGAATTGGAACTACGAACGAACTGGAACTCTTTCCCTTTTAGACCAACTTGCTCCTGTTGCTTATGAGCCCTTGGTTCTCTTCTACCCCTACAATGATCGTGACGTTACATTCACACCTGCAAAGAGATCTCTCTGGATGAAGAAGTCACTGTCCGAAACTCTGACTCGTTTCTACCCTTTTGCTGGAAGAATCAAAGAAAACATCTCAATCGAATGCTTCGATGATGGTGTTGACTATGTGGAAGCTCGTGTCCATGGCCTTCTCTCCACCCTTTTAGCACAACCTGATGCCGAGGCACTGAGGCAGCTCCTTCCGGTAGAGATTGAGTCCCCGAAAGCAGGGACCGGGCCTCTGCTTCTTGTTCAGGAGAACTTTTTTGATTGTGGTGGATTGGCAATTGGTGTGTGCATGTCACGGAAGTTGGGTGATGCAGCCTCGCTGAGCACATTCATTATGTCATGGGCTGCTAGTGCTCTTGGATTTAGTCAAGCACTGCTTCCCGATTTCAACGCCTCATTTCGGTTCCCACCAATGGATTGTTCCTCTGCCCACAACTCTGCTGTGGATCATATCATCGAGAAGAGAACGAATGGTTGTGTCACAAAGAGGTTTGTGTTTTATGCATCAAAGATTGGCGCCCTTCAGACTAAAGCAGCCAGTGCAAATGTGAAACAGCCCACGAATTCGGAAGCTGTCACAGCTCTCATTTGGAGATGTGCAGTGGCTGCAGCCTCAAGATCAAGCTTACTGCACAAGTCTCCTCCTAAGCTCTCTGTGTTGTCCCAATCTGTGGATATTCGCAAAAGGGTCGTGCCCCCTTTGTCGGATGACTCTATAGGGAACCTTGTGGGATACTTTGCTGCACAGGCAAATGAGAGTGAGTTGGAGCTGCCAGGCTTGGTTGCTCAACTAAGGAAAGGGCTCAAAGAGGCGAGCAACTATTGTGCCGAAAGACTTAAAGGGAGTGATGGATCTCGGGTGATTATCCAATCTTTCAAAGAGACAGATGATTTCATCCATAGAGATGACATTATGAACTTTCATGTCTGCACAGGTTTGAGTGATTATAAGGTATTGTATGAGGTGAATTTTGGGTGGGGAAGGCCAATTTGGGTGAGTAATATTCCTAGTGGTTTAAACAGAAATGTAGCATCATTGGTGAGCACAAGAGAGGATGATGGGACAGAGGCTTGGGTGACTTTGAGTGAGGGAGACATGGCAACTTTTGAACAGAACCAGGAGCTTCTTGCATTTGCTGTGGTGAATCCAAGTGTCTTGGAACCCATTGCATTGAAGTCTGTGAAAAGACTGCCAAGGATGTTCGGTTTAAAGTTACAAGACGGCTGCCGGTGGATTCTCTCGCTAAGTTCACTCAACAGTGTCGCCGAAAATCTCGAAATTTTAAACCATGAAGGTTTATCCTGCACAAAGGCCTGTGGAAATGAGGCTGATATGATGGCTGCTAATGAGTTAAATGCTCACACATCCCTTCAAGACAGTTCGGATGGTATCTACCGAATCTTGTGA

Protein Analysis

954

Amino Acids

105.46

Weight (kDa)

5.34

Isoelectric Point (pI)

49.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 5 - 428 1.1e-96 Transferase family
Transferase PF02458 455 - 861 1.8e-75 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0017041)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G26040
fragaria_vesca FvH4_3g15920
malus_domestica MD05G1218200.v1.1 MD16G1109400.v1.1
rosa_chinensis RchiOBHm_Chr5g0026761
rosa_laevigata RLG00000032959
rosa_multiflora Rmu_sc0001493.1_g000016 Rmu_ssc0000172.1_g000028 Rmu_ssc0000172.1_g000030
rosa_roxburghii Rroxscaffold_1G00052730
rosa_rugosa Rorug05G0095400
rosa_samantha Rh5DG187500
rosa_wichuraiana Rw5G017120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2406
AarI CACCTGC 1 cut(s) 1462
Acc36I ACCTGC 1 cut(s) 1462
AccB1I GGYRCC 1 cut(s) 1973
AccB7I CCANNNNNTGG 2 cut(s) 563, 2128
AccI GTMKAC 1 cut(s) 630
AciI CCGC 1 cut(s) 857
AclWI GGATC 4 cut(s) 808, 1046, 1911, 2317
AcoI YGGCCR 1 cut(s) 936
AcsI RAATTY 8 cut(s) 79, 281, 560, 871, 965, 2020, 2425, 2736
AcuI CTGAAG 2 cut(s) 933, 1964
AcvI CACGTG 1 cut(s) 737
AcyI GRCGYC 1 cut(s) 1974
AfaI GTAC 5 cut(s) 535, 928, 1052, 1096, 1276
AfiI CCNNNNNNNGG 8 cut(s) 230, 563, 1520, 1676, 1857, 1870, 2128, 2161
AflIII ACRYGT 2 cut(s) 734, 736
AjnI CCWGG 2 cut(s) 2230, 2574
AjuI GAANNNNNNNTTGG 8 cut(s) 139, 171, 1116, 1148, 1861, 1893, 2431, 2463
Alw21I GWGCWC 3 cut(s) 1784, 1813, 2504
Alw26I GTCTC 3 cut(s) 2100, 2333, 2544
AlwI GGATC 4 cut(s) 808, 1046, 1911, 2317
AlwNI CAGNNNCTG 2 cut(s) 392, 2063
Ama87I CYCGRG 2 cut(s) 624, 2313
AoxI GGCC 7 cut(s) 809, 936, 1257, 1594, 1685, 2441, 2769
ApoI RAATTY 8 cut(s) 79, 281, 560, 871, 965, 2020, 2425, 2736
ArsI GACNNNNNNTTYG 4 cut(s) 282, 314, 382, 414
Asp700I GAANNNNTTC 1 cut(s) 1366
AspLEI GCGC 2 cut(s) 295, 1976
AspS9I GGNCC 3 cut(s) 395, 1680, 1685
AsuC2I CCSGG 1 cut(s) 1684
AsuHPI GGTGA 9 cut(s) 292, 1168, 1775, 2329, 2434, 2464, 2509, 2545, 2611
AvaI CYCGRG 2 cut(s) 624, 2313
AvaII GGWCC 2 cut(s) 395, 1680
BaeGI GKGCMC 1 cut(s) 2154
BaeI ACNNNNGTAYC 2 cut(s) 918, 951
BalI TGGCCA 1 cut(s) 938
BanI GGYRCC 1 cut(s) 1973
BanII GRGCYC 3 cut(s) 514, 1407, 2262
BauI CACGAG 1 cut(s) 1584
BbrPI CACGTG 1 cut(s) 737
BbsI GAAGAC 1 cut(s) 927
Bbv12I GWGCWC 3 cut(s) 1784, 1813, 2504
BceAI ACGGC 1 cut(s) 2695
BcgI CGANNNNNNTGC 2 cut(s) 2128, 2162
BciT130I CCWGG 2 cut(s) 2232, 2576
BciVI GTATCC 1 cut(s) 2183
BcnI CCSGG 1 cut(s) 1684
BcoDI GTCTC 3 cut(s) 2100, 2333, 2544
BfaI CTAG 6 cut(s) 159, 323, 711, 1167, 1806, 2466
BfmI CTRYAG 3 cut(s) 1087, 2064, 2172
BfoI RGCGCY 1 cut(s) 1977
BfuAI ACCTGC 1 cut(s) 1462
BfuI GTATCC 1 cut(s) 2183
BglII AGATCT 2 cut(s) 943, 1463
BlpI GCTNAGC 1 cut(s) 1778
BmcAI AGTACT 1 cut(s) 535
Bme1390I CCNGG 3 cut(s) 1684, 2232, 2576
Bme18I GGWCC 2 cut(s) 395, 1680
BmeT110I CYCGRG 2 cut(s) 624, 2313
BmgT120I GGNCC 3 cut(s) 395, 1680, 1685
BmiI GGNNCC 5 cut(s) 1681, 1862, 1975, 2180, 2619
BmrFI CCNGG 3 cut(s) 1684, 2232, 2576
BmsI GCATC 9 cut(s) 190, 466, 581, 664, 791, 1615, 1756, 1970, 2498
BpiI GAAGAC 1 cut(s) 927
Bpu10I CCTNAGC 2 cut(s) 310, 2103
Bpu1102I GCTNAGC 1 cut(s) 1778
BpuEI CTTGAG 2 cut(s) 498, 2056
BpuMI CCSGG 1 cut(s) 1684
BsaAI YACGTR 1 cut(s) 737
BsaHI GRCGYC 1 cut(s) 1974
BsaJI CCNNGG 4 cut(s) 1407, 1591, 1629, 2651
BsaWI WCCGGW 1 cut(s) 1651
Bsc4I CCNNNNNNNGG 8 cut(s) 230, 563, 1520, 1676, 1857, 1870, 2128, 2161
Bse118I RCCGGY 1 cut(s) 2685
Bse1I ACTGG 4 cut(s) 397, 531, 1363, 1995
Bse3DI GCAATG 2 cut(s) 1161, 2622
BseBI CCWGG 2 cut(s) 2232, 2576
BseDI CCNNGG 4 cut(s) 1407, 1591, 1629, 2651
BseGI GGATG 9 cut(s) 50, 1142, 1479, 2170, 2352, 2518, 2661, 2822, 2848
BseLI CCNNNNNNNGG 8 cut(s) 230, 563, 1520, 1676, 1857, 1870, 2128, 2161
BseMI GCAATG 2 cut(s) 1161, 2622
BseMII CTCAG 5 cut(s) 88, 357, 1290, 1628, 1769
BseNI ACTGG 4 cut(s) 397, 531, 1363, 1995
BseRI GAGGAG 3 cut(s) 54, 598, 2088
BseSI GKGCMC 1 cut(s) 2154
BseYI CCCAGC 2 cut(s) 507, 878
BsgI GTGCAG 6 cut(s) 792, 2072, 2076, 2184, 2371, 2746
BshFI GGCC 7 cut(s) 811, 938, 1259, 1596, 1687, 2443, 2771
BshNI GGYRCC 1 cut(s) 1973
BsiHKAI GWGCWC 3 cut(s) 1784, 1813, 2504
BsiHKCI CYCGRG 2 cut(s) 624, 2313
BsiSI CCGG 3 cut(s) 1652, 1683, 2686
BslFI GGGAC 5 cut(s) 403, 1651, 1693, 2104, 2533
BslI CCNNNNNNNGG 8 cut(s) 230, 563, 1520, 1676, 1857, 1870, 2128, 2161
BsmAI GTCTC 3 cut(s) 2100, 2333, 2544
BsmFI GGGAC 5 cut(s) 403, 1651, 1693, 2104, 2533
BsmI GAATGC 1 cut(s) 1556
BsnI GGCC 7 cut(s) 811, 938, 1259, 1596, 1687, 2443, 2771
BsoBI CYCGRG 2 cut(s) 624, 2313
Bsp1286I GDGCHC 7 cut(s) 514, 1407, 1784, 1813, 2154, 2262, 2504
Bsp1407I TGTACA 1 cut(s) 1094
Bsp1720I GCTNAGC 1 cut(s) 1778
Bsp19I CCATGG 1 cut(s) 1591
BspACI CCGC 1 cut(s) 857
BspANI GGCC 7 cut(s) 811, 938, 1259, 1596, 1687, 2443, 2771
BspCNI CTCAG 5 cut(s) 87, 358, 1291, 1629, 1770
BspLI GGNNCC 5 cut(s) 1681, 1862, 1975, 2180, 2619
BspMAI CTGCAG 1 cut(s) 2068
BspMI ACCTGC 1 cut(s) 1462
BspPI GGATC 4 cut(s) 808, 1046, 1911, 2317
BspT107I GGYRCC 1 cut(s) 1973
BsrDI GCAATG 2 cut(s) 1161, 2622
BsrFI RCCGGY 1 cut(s) 2685
BsrGI TGTACA 1 cut(s) 1094
BsrI ACTGG 4 cut(s) 397, 531, 1363, 1995
BssAI RCCGGY 1 cut(s) 2685
BssECI CCNNGG 4 cut(s) 1407, 1591, 1629, 2651
BssNAI GTATAC 1 cut(s) 631
BssNI GRCGYC 1 cut(s) 1974
BssSI CACGAG 1 cut(s) 1584
BssT1I CCWWGG 3 cut(s) 1407, 1591, 2651
Bst1107I GTATAC 1 cut(s) 631
Bst2BI CACGAG 1 cut(s) 1584
Bst2UI CCWGG 2 cut(s) 2232, 2576
Bst4CI ACNGT 7 cut(s) 253, 354, 489, 926, 1488, 2717, 2837
Bst6I CTCTTC 3 cut(s) 143, 1421, 1913
BstACI GRCGYC 1 cut(s) 1974
BstAPI GCANNNNNTGC 2 cut(s) 1997, 2063
BstAUI TGTACA 1 cut(s) 1094
BstBAI YACGTR 1 cut(s) 737
BstC8I GCNNGC 2 cut(s) 1287, 2272
BstDEI CTNAG 9 cut(s) 74, 310, 366, 1299, 1637, 1778, 2103, 2249, 2702
BstDSI CCRYGG 1 cut(s) 1591
BstEII GGTNACC 1 cut(s) 1156
BstENI CCTNNNNNAGG 1 cut(s) 228
BstF5I GGATG 9 cut(s) 50, 1142, 1479, 2170, 2352, 2518, 2661, 2822, 2848
BstH2I RGCGCY 1 cut(s) 1977
BstHHI GCGC 2 cut(s) 295, 1976
BstMAI GTCTC 3 cut(s) 2100, 2333, 2544
BstNI CCWGG 2 cut(s) 2232, 2576
BstNSI RCATGY 1 cut(s) 1750
BstPI GGTNACC 1 cut(s) 1156
BstSCI CCNGG 3 cut(s) 1682, 2230, 2574
BstSFI CTRYAG 3 cut(s) 1087, 2064, 2172
BstSLI GKGCMC 1 cut(s) 2154
BstV2I GAAGAC 1 cut(s) 927
BstX2I RGATCY 4 cut(s) 800, 943, 1463, 2309
BstYI RGATCY 4 cut(s) 800, 943, 1463, 2309
BstZ17I GTATAC 1 cut(s) 631
BsuI GTATCC 1 cut(s) 2183
BsuRI GGCC 7 cut(s) 811, 938, 1259, 1596, 1687, 2443, 2771
BtgI CCRYGG 1 cut(s) 1591
BtsCI GGATG 9 cut(s) 50, 1142, 1479, 2170, 2352, 2518, 2661, 2822, 2848
BtsI GCAGTG 2 cut(s) 1829, 2064
BtsIMutI CAGTG 9 cut(s) 258, 485, 822, 1484, 1634, 1829, 2002, 2064, 2722
BveI ACCTGC 1 cut(s) 1462
Cac8I GCNNGC 2 cut(s) 1287, 2272
CaiI CAGNNNCTG 2 cut(s) 392, 2063
CfoI GCGC 2 cut(s) 295, 1976
Cfr10I RCCGGY 1 cut(s) 2685
Cfr13I GGNCC 3 cut(s) 395, 1680, 1685
Csp6I GTAC 5 cut(s) 534, 927, 1051, 1095, 1275
CviQI GTAC 5 cut(s) 534, 927, 1051, 1095, 1275
DdeI CTNAG 9 cut(s) 74, 310, 366, 1299, 1637, 1778, 2103, 2249, 2702
DinI GGCGCC 1 cut(s) 1975
DraI TTTAAA 3 cut(s) 2475, 2667, 2742
EaeI YGGCCR 1 cut(s) 936
Eam1104I CTCTTC 3 cut(s) 143, 1421, 1913
EarI CTCTTC 3 cut(s) 143, 1421, 1913
Eco130I CCWWGG 3 cut(s) 1407, 1591, 2651
Eco147I AGGCCT 1 cut(s) 2771
Eco24I GRGCYC 3 cut(s) 514, 1407, 2262
Eco47I GGWCC 2 cut(s) 395, 1680
Eco57I CTGAAG 2 cut(s) 933, 1964
Eco72I CACGTG 1 cut(s) 737
Eco88I CYCGRG 2 cut(s) 624, 2313
Eco91I GGTNACC 1 cut(s) 1156
EcoNI CCTNNNNNAGG 1 cut(s) 228
EcoO65I GGTNACC 1 cut(s) 1156
EcoRI GAATTC 1 cut(s) 2020
EcoRII CCWGG 2 cut(s) 2230, 2574
EcoT14I CCWWGG 3 cut(s) 1407, 1591, 2651
EcoT22I ATGCAT 1 cut(s) 1963
EcoT38I GRGCYC 3 cut(s) 514, 1407, 2262
EgeI GGCGCC 1 cut(s) 1975
EheI GGCGCC 1 cut(s) 1975
ErhI CCWWGG 3 cut(s) 1407, 1591, 2651
FalI AAGNNNNNCTT 2 cut(s) 1818, 1850
FaqI GGGAC 5 cut(s) 403, 1651, 1693, 2104, 2533
FauNDI CATATG 1 cut(s) 1291
FblI GTMKAC 1 cut(s) 630
FokI GGATG 9 cut(s) 37, 1149, 1486, 2177, 2339, 2525, 2668, 2809, 2855
FriOI GRGCYC 3 cut(s) 514, 1407, 2262
FspBI CTAG 6 cut(s) 159, 323, 711, 1167, 1806, 2466
GlaI GCGC 2 cut(s) 294, 1975
GsaI CCCAGC 2 cut(s) 511, 882
HaeII RGCGCY 1 cut(s) 1977
HaeIII GGCC 7 cut(s) 811, 938, 1259, 1596, 1687, 2443, 2771
HapII CCGG 3 cut(s) 1652, 1683, 2686
HhaI GCGC 2 cut(s) 295, 1976
Hin1I GRCGYC 1 cut(s) 1974
Hin6I GCGC 2 cut(s) 293, 1974
HinP1I GCGC 2 cut(s) 293, 1974
HincII GTYRAC 3 cut(s) 418, 1236, 1570
HindII GTYRAC 3 cut(s) 418, 1236, 1570
HindIII AAGCTT 3 cut(s) 164, 551, 2080
HpaII CCGG 3 cut(s) 1652, 1683, 2686
HphI GGTGA 9 cut(s) 292, 1168, 1775, 2329, 2434, 2464, 2509, 2545, 2611
Hpy166II GTNNAC 8 cut(s) 418, 492, 631, 835, 1236, 1316, 1570, 2708
Hpy8I GTNNAC 8 cut(s) 418, 492, 631, 835, 1236, 1316, 1570, 2708
HpyAV CCTTC 9 cut(s) 143, 368, 968, 1607, 1658, 1988, 2433, 2744, 2837
HpyCH4III ACNGT 7 cut(s) 253, 354, 489, 926, 1488, 2717, 2837
HpyCH4IV ACGT 2 cut(s) 736, 1440
HpyF3I CTNAG 9 cut(s) 74, 310, 366, 1299, 1637, 1778, 2103, 2249, 2702
HpySE526I ACGT 2 cut(s) 736, 1440
Hsp92I GRCGYC 1 cut(s) 1974
HspAI GCGC 2 cut(s) 293, 1974
KasI GGCGCC 1 cut(s) 1973
LmnI GCTCC 5 cut(s) 275, 1393, 1650, 2224, 2578
LweI GCATC 9 cut(s) 190, 466, 581, 664, 791, 1615, 1756, 1970, 2498
MaeI CTAG 6 cut(s) 159, 323, 711, 1167, 1806, 2466
MaeII ACGT 2 cut(s) 736, 1440
MboII GAAGA 7 cut(s) 130, 246, 932, 1408, 1489, 1536, 1930
MfeI CAATTG 3 cut(s) 444, 502, 1734
MflI RGATCY 4 cut(s) 800, 943, 1463, 2309
MhlI GDGCHC 7 cut(s) 514, 1407, 1784, 1813, 2154, 2262, 2504
MlsI TGGCCA 1 cut(s) 938
MluNI TGGCCA 1 cut(s) 938
Mly113I GGCGCC 1 cut(s) 1974
MlyI GAGTC 4 cut(s) 599, 1495, 1673, 2162
MmeI TCCRAC 3 cut(s) 1179, 2142, 2202
Mox20I TGGCCA 1 cut(s) 938
Mph1103I ATGCAT 1 cut(s) 1963
MroXI GAANNNNTTC 1 cut(s) 1366
MscI TGGCCA 1 cut(s) 938
MseI TTAA 7 cut(s) 45, 240, 2295, 2474, 2666, 2741, 2810
MslI CAYNNNNRTG 2 cut(s) 11, 2361
Msp20I TGGCCA 1 cut(s) 938
MspA1I CMGCKG 3 cut(s) 365, 719, 1092
MspI CCGG 3 cut(s) 1652, 1683, 2686
MspR9I CCNGG 3 cut(s) 1684, 2232, 2576
MssI GTTTAAAC 1 cut(s) 2475
MunI CAATTG 3 cut(s) 444, 502, 1734
Mva1269I GAATGC 1 cut(s) 1556
MvaI CCWGG 2 cut(s) 2232, 2576
NarI GGCGCC 1 cut(s) 1974
NciI CCSGG 1 cut(s) 1684
NcoI CCATGG 1 cut(s) 1591
NdeI CATATG 1 cut(s) 1291
NlaIV GGNNCC 5 cut(s) 1681, 1862, 1975, 2180, 2619
NmeAIII GCCGAG 1 cut(s) 1654
NmuCI GTSAC 8 cut(s) 298, 1156, 1436, 1482, 1749, 1936, 2032, 2533
NsiI ATGCAT 1 cut(s) 1963
NspI RCATGY 1 cut(s) 1750
PaqCI CACCTGC 1 cut(s) 1462
PceI AGGCCT 1 cut(s) 2771
PcsI WCGNNNNNNNCGW 1 cut(s) 1554
PctI GAATGC 1 cut(s) 1556
PdmI GAANNNNTTC 1 cut(s) 1366
PfeI GAWTC 6 cut(s) 191, 1331, 1527, 2602, 2692, 2856
PflMI CCANNNNNTGG 2 cut(s) 563, 2128
PleI GAGTC 4 cut(s) 599, 1495, 1672, 2162
PluTI GGCGCC 1 cut(s) 1977
PmaCI CACGTG 1 cut(s) 737
PmeI GTTTAAAC 1 cut(s) 2475
PmlI CACGTG 1 cut(s) 737
PpsI GAGTC 4 cut(s) 599, 1495, 1672, 2162
Ppu21I YACGTR 1 cut(s) 737
PsiI TTATAA 1 cut(s) 2406
Psp6I CCWGG 2 cut(s) 2230, 2574
PspCI CACGTG 1 cut(s) 737
PspEI GGTNACC 1 cut(s) 1156
PspFI CCCAGC 2 cut(s) 507, 878
PspGI CCWGG 2 cut(s) 2230, 2574
PspN4I GGNNCC 5 cut(s) 1681, 1862, 1975, 2180, 2619
PspPI GGNCC 3 cut(s) 395, 1680, 1685
PstI CTGCAG 1 cut(s) 2068
PstNI CAGNNNCTG 2 cut(s) 392, 2063
PsuI RGATCY 4 cut(s) 800, 943, 1463, 2309
PvuII CAGCTG 3 cut(s) 365, 719, 1092
RsaI GTAC 5 cut(s) 535, 928, 1052, 1096, 1276
RsaNI GTAC 5 cut(s) 534, 927, 1051, 1095, 1275
RseI CAYNNNNRTG 2 cut(s) 11, 2361
SaqAI TTAA 7 cut(s) 45, 240, 2295, 2474, 2666, 2741, 2810
Sau96I GGNCC 3 cut(s) 395, 1680, 1685
ScaI AGTACT 1 cut(s) 535
SchI GAGTC 4 cut(s) 599, 1495, 1673, 2162
ScrFI CCNGG 3 cut(s) 1684, 2232, 2576
SduI GDGCHC 7 cut(s) 514, 1407, 1784, 1813, 2154, 2262, 2504
SfaNI GCATC 9 cut(s) 190, 466, 581, 664, 791, 1615, 1756, 1970, 2498
SfcI CTRYAG 3 cut(s) 1087, 2064, 2172
SfoI GGCGCC 1 cut(s) 1975
SinI GGWCC 2 cut(s) 395, 1680
SmiMI CAYNNNNRTG 2 cut(s) 11, 2361
SmlI CTYRAG 2 cut(s) 513, 2071
SmoI CTYRAG 2 cut(s) 513, 2071
SseBI AGGCCT 1 cut(s) 2771
SsiI CCGC 1 cut(s) 857
SspDI GGCGCC 1 cut(s) 1973
SspI AATATT 2 cut(s) 1186, 2461
SspMI CTAG 6 cut(s) 159, 323, 711, 1167, 1806, 2466
StuI AGGCCT 1 cut(s) 2771
StyD4I CCNGG 3 cut(s) 1682, 2230, 2574
StyI CCWWGG 3 cut(s) 1407, 1591, 2651
TaaI ACNGT 7 cut(s) 253, 354, 489, 926, 1488, 2717, 2837
TaiI ACGT 2 cut(s) 739, 1443
TatI WGTACW 4 cut(s) 533, 1050, 1094, 1274
TauI GCSGC 1 cut(s) 859
TfiI GAWTC 6 cut(s) 191, 1331, 1527, 2602, 2692, 2856
Tru1I TTAA 7 cut(s) 45, 240, 2295, 2474, 2666, 2741, 2810
Tru9I TTAA 7 cut(s) 45, 240, 2295, 2474, 2666, 2741, 2810
TscAI CASTG 9 cut(s) 258, 492, 822, 1491, 1641, 1836, 2002, 2064, 2722
TseFI GTSAC 8 cut(s) 298, 1156, 1436, 1482, 1749, 1936, 2032, 2533
Tsp45I GTSAC 8 cut(s) 298, 1156, 1436, 1482, 1749, 1936, 2032, 2533
TspGWI ACGGA 1 cut(s) 1768
TspRI CASTG 9 cut(s) 258, 492, 822, 1491, 1641, 1836, 2002, 2064, 2722
Van91I CCANNNNNTGG 2 cut(s) 563, 2128
VpaK11BI GGWCC 2 cut(s) 395, 1680
XagI CCTNNNNNAGG 1 cut(s) 228
XapI RAATTY 8 cut(s) 79, 281, 560, 871, 965, 2020, 2425, 2736
XbaI TCTAGA 1 cut(s) 322
XceI RCATGY 1 cut(s) 1750
XmiI GTMKAC 1 cut(s) 630
XmnI GAANNNNTTC 1 cut(s) 1366
XspI CTAG 6 cut(s) 159, 323, 711, 1167, 1806, 2466
ZrmI AGTACT 1 cut(s) 535
Zsp2I ATGCAT 1 cut(s) 1963
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.