AT3G44600

Peptidyl-prolyl cis-trans isomerase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0009586
Physical Location & Seq
Reverse (-)
16164935 .. 16169304
4370 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G44600.1

Sequence Viewer

Length: 1896 bp
ATGGAGGAAGAATCTAAGAATGGCGGAACCACGATTCCGACTGAAGAATTGGCGGTGGTTGCGGTGCCACCTGTAGTAGAAGAAGAGGAGCCGATGGTCGGACCTGGACCAGCTCCACGAGGCAAACGCAAGCGTCCGCTTCAATTCGAGCAAGCTTATCTTGATTCGCTTCCTTCTGCTAATATGTATGAGAAAAGTTATATGCATCGAGATGTAGTTACACATGTTGCTGTTTCAGCAGCTGAGTTCTTTATAAGTGGAAGTATGGATGGTCACTTGAAATTTTGGAAGAAAAAGGGTGTTGGTATCGAGTTTGCTAAGCATTTCCGCTCCCATCTCGGTCCAATTGAAGGTCTAGCGGTTAGCATTGATGGTTTGCTTTGCTGTACAATCTCAAATGATCATGCTGTTAAAATATATGATGTTGTCAACTACGATATGATGGCCATGATCCGTTTGCCATATATTCCTGGTGCTGTTGAGTGGGTCTACAAGCAAGGGGATGTCAAAGCTAAACTTGCTGTCAGTGACCGAGACTCTTTGTTTGTGCACATTTATGATCCTCGTTCTGGTTCCAACGAACCCATTGCTTCAAAAGAGATACATATGAATCCAATTAAGGTCATGAAGTACAATCCTGTTTCGGACACAATGATCTCTGGTGACACAAAAGGAATCATTGAGTACTGGAGTGCAACTACATTACAGTTTCCCGAGGATGAGGTAAACTTTAAACTGAAGAGTGATACAAATCTCTTTGAGATTATAAAGTGCAAAACAACAATCTCTGCCATTGAGGTGAGTCCAGATGGTAAACAGTTTTCCATTACAGCTCCTGATCGTAGGATTCGTGTGTTCTGGTTTAGAACTGGTAAACTGAGGCGGGTATATGATGAGTCACTTGTGGTGGCCCAAGATCTGCAGAGGAGTGATGCTCCCTTATACAGGCTTGAAGCTATTGACTTTGGTAGAAGAATGGCAGTTGAAAAGGAACTTGAAAAAACCGAGAGTGCTCCGCAGCCCAATGCTGTGTTTGATGAAAGCTCTAATTTCCTTATATACGCCACTTTTCTTGGAATAAAAGTAATAAATTTACACACCAACACAGTTGCAAGGATCCTTGGAAAGGTGGAGAGTAATGAAAGGTATCTGAGAGTTGCATTATATCAAGGTGATCAAGGAGGCAAGAAAGTTAGAAAGATTCCTGCAGCTGCAGCAAATGTAAATGAAAGCAAGGAGCCTTTGACTGATCCGACTATCCTATGCTGTGCCTTTAAGAAACACAGGATCTATATGTTCAGTCGGAGAGAGCCAGAAGAACCTGAAGATGCAAGCCAAGGGAGAGATGTGTTTAACGAGAAGCCTGCTGCTGATGAACTTATGTCTGTCTCAGATATTGGAAACTCAGCCACAACATCCCTTCCAGAGAACGTGATAATGCATACTACGCTTGGTGACATTCACATGAAGCTTTACCCAGAAGAATGTCCCAAAACTGTGGAGAATTTCACAACACACTGTAGAAATGGCTATTACGATAACCACCTTTTCCATCGGGTTATCAGAGGATTTATGATACAGACTGGAGATCCTCTTGGGGATGGTACTGGAGGACAGTCAATTTGGGGCAGAGAATTTGAGGACGAGTTTCACAAAAGTCTAAGGCATGACAGGCCGTTCACATTGTCTATGGCAAATGCCGGCCCAAACACAAATGGGTCTCAGTTCTTCATCACAACAGTGGCTACACCGTGGCTAGACAATAAGCACACTGTTTTTGGAAGAGTTGTGAAGGGAATGGACGTCGTTCAGGGTATAGAGAAAGTGAAGACAGACAAGAACGACAGGCCTTACCAAGATGTGAAGATACTTAATGTCACCGTTCCGAAATCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000413 GO:0003002 GO:0003006 GO:0003674 GO:0003682 GO:0003755 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0006464 GO:0006807 GO:0007275 GO:0007389 GO:0008144 GO:0008150 GO:0008152 GO:0009653 GO:0009791 GO:0009888 GO:0009908 GO:0009909 GO:0009933 GO:0009965 GO:0009987 GO:0010015 GO:0010016 GO:0010051 GO:0010073 GO:0010075 GO:0010082 GO:0010305 GO:0010338 GO:0010358 GO:0016018 GO:0016604 GO:0016853 GO:0016859 GO:0018193 GO:0018208 GO:0019222 GO:0019538 GO:0022414 GO:0022622 GO:0031056 GO:0031060 GO:0031323 GO:0031399 GO:0031974 GO:0031981 GO:0032268 GO:0032501 GO:0032502 GO:0032991 GO:0033043 GO:0033044 GO:0033218 GO:0036211 GO:0040008 GO:0042277 GO:0042393 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0048364 GO:0048366 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048442 GO:0048443 GO:0048444 GO:0048447 GO:0048449 GO:0048453 GO:0048464 GO:0048466 GO:0048467 GO:0048507 GO:0048509 GO:0048532 GO:0048580 GO:0048608 GO:0048638 GO:0048646 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051128 GO:0051171 GO:0051239 GO:0051246 GO:0060255 GO:0061458 GO:0065007 GO:0070013 GO:0071013 GO:0071704 GO:0080090 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0099402 GO:0140096 GO:1901564 GO:1902275 GO:1902494 GO:1905392 GO:1905393 GO:1990904 GO:2000026 GO:2000241 GO:2000280
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pro_isomerase WD40

Protein Analysis

631

Amino Acids

70.98

Weight (kDa)

6.18

Isoelectric Point (pI)

45.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WD40_Prp19 PF24814 61 - 211 1.8e-06 Prp19 WD40 domain
Beta-prop_WDR5 PF25175 68 - 149 3.7e-06 WDR5 beta-propeller domain
Beta-prop_THOC3 PF25174 69 - 297 3.4e-13 THOC3 beta-propeller domain
Pro_isomerase PF00160 478 - 628 2.7e-56 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 254, 767
AatII GACGTC 1 cut(s) 1806
AccB1I GGYRCC 1 cut(s) 64
AccBSI CCGCTC 1 cut(s) 330
AccI GTMKAC 1 cut(s) 489
AciI CCGC 8 cut(s) 24, 53, 62, 137, 328, 359, 883, 1016
AclWI GGATC 7 cut(s) 445, 554, 1111, 1124, 1244, 1295, 1583
AcoI YGGCCR 1 cut(s) 444
AcsI RAATTY 4 cut(s) 281, 1090, 1504, 1634
AcuI CTGAAG 3 cut(s) 63, 758, 1344
AcyI GRCGYC 1 cut(s) 1803
AfaI GTAC 4 cut(s) 388, 632, 686, 1606
AfiI CCNNNNNNNGG 5 cut(s) 98, 350, 569, 945, 1126
AflIII ACRYGT 1 cut(s) 223
AgsI TTSAA 7 cut(s) 143, 280, 350, 594, 953, 986, 998
AjnI CCWGG 2 cut(s) 103, 469
AleI CACNNNNGTG 1 cut(s) 1739
AloI GAACNNNNNNTCC 2 cut(s) 19, 51
AluBI AGCT 9 cut(s) 113, 155, 242, 512, 833, 956, 1044, 1211, 1471
AluI AGCT 9 cut(s) 113, 155, 242, 512, 833, 956, 1044, 1211, 1471
Alw21I GWGCWC 2 cut(s) 552, 1015
Alw26I GTCTC 3 cut(s) 528, 1393, 1725
Alw44I GTGCAC 1 cut(s) 548
AlwI GGATC 7 cut(s) 445, 554, 1111, 1124, 1244, 1295, 1583
AlwNI CAGNNNCTG 2 cut(s) 242, 836
Ama87I CYCGRG 1 cut(s) 713
AoxI GGCC 5 cut(s) 444, 909, 1673, 1702, 1847
ApaLI GTGCAC 1 cut(s) 548
ApeKI GCWGC 6 cut(s) 239, 1018, 1208, 1211, 1214, 1367
ApoI RAATTY 4 cut(s) 281, 1090, 1504, 1634
ArsI GACNNNNNNTTYG 4 cut(s) 527, 559, 1605, 1637
AspS9I GGNCC 5 cut(s) 101, 107, 341, 910, 1703
AsuHPI GGTGA 5 cut(s) 674, 811, 1184, 1466, 1870
AvaI CYCGRG 1 cut(s) 713
AvaII GGWCC 3 cut(s) 101, 107, 341
BaeGI GKGCMC 1 cut(s) 552
BalI TGGCCA 1 cut(s) 446
BamHI GGATCC 1 cut(s) 1116
BanI GGYRCC 1 cut(s) 64
BauI CACGAG 1 cut(s) 117
BbsI GAAGAC 1 cut(s) 1835
Bbv12I GWGCWC 2 cut(s) 552, 1015
BbvI GCAGC 6 cut(s) 251, 1030, 1198, 1220, 1226, 1354
BccI CCATC 8 cut(s) 88, 263, 342, 365, 436, 803, 1560, 1595
BceAI ACGGC 1 cut(s) 1660
BcgI CGANNNNNNTGC 4 cut(s) 569, 603, 1346, 1380
BciT130I CCWGG 2 cut(s) 105, 471
BclI TGATCA 2 cut(s) 400, 1174
BcoDI GTCTC 3 cut(s) 528, 1393, 1725
BfaI CTAG 2 cut(s) 356, 1757
BfmI CTRYAG 5 cut(s) 72, 920, 1206, 1212, 1519
BglII AGATCT 1 cut(s) 916
BisI GCNGC 6 cut(s) 240, 1019, 1209, 1212, 1215, 1368
BlpI GCTNAGC 1 cut(s) 318
BlsI GCNGC 6 cut(s) 241, 1020, 1210, 1213, 1216, 1369
BmcAI AGTACT 1 cut(s) 686
Bme1390I CCNGG 2 cut(s) 105, 471
Bme18I GGWCC 3 cut(s) 101, 107, 341
BmeT110I CYCGRG 1 cut(s) 713
BmgT120I GGNCC 5 cut(s) 101, 107, 341, 910, 1703
BmiI GGNNCC 6 cut(s) 28, 66, 90, 574, 1118, 1239
BmrFI CCNGG 2 cut(s) 105, 471
BmsI GCATC 3 cut(s) 214, 922, 1318
BpiI GAAGAC 1 cut(s) 1835
BplI GAGNNNNNCTC 2 cut(s) 919, 951
BpmI CTGGAG 3 cut(s) 709, 1605, 1629
Bpu1102I GCTNAGC 1 cut(s) 318
BsaBI GATNNNNATC 1 cut(s) 750
BsaHI GRCGYC 1 cut(s) 1803
BsaI GGTCTC 1 cut(s) 1725
BsaJI CCNNGG 4 cut(s) 714, 1120, 1336, 1751
Bsc4I CCNNNNNNNGG 5 cut(s) 98, 350, 569, 945, 1126
Bse118I RCCGGY 1 cut(s) 1700
Bse1I ACTGG 4 cut(s) 692, 874, 1588, 1612
Bse3DI GCAATG 1 cut(s) 585
Bse8I GATNNNNATC 1 cut(s) 750
BseBI CCWGG 2 cut(s) 105, 471
BseDI CCNNGG 4 cut(s) 714, 1120, 1336, 1751
BseGI GGATG 5 cut(s) 274, 508, 724, 1415, 1606
BseJI GATNNNNATC 1 cut(s) 750
BseLI CCNNNNNNNGG 5 cut(s) 98, 350, 569, 945, 1126
BseMI GCAATG 1 cut(s) 585
BseMII CTCAG 6 cut(s) 234, 869, 1142, 1404, 1419, 1736
BseNI ACTGG 4 cut(s) 692, 874, 1588, 1612
BseRI GAGGAG 2 cut(s) 101, 940
BseSI GKGCMC 1 cut(s) 552
BseXI GCAGC 6 cut(s) 251, 1030, 1198, 1220, 1226, 1354
BshFI GGCC 5 cut(s) 446, 911, 1675, 1704, 1849
BshNI GGYRCC 1 cut(s) 64
BsiHKAI GWGCWC 2 cut(s) 552, 1015
BsiHKCI CYCGRG 1 cut(s) 713
BsiSI CCGG 1 cut(s) 1701
BslFI GGGAC 1 cut(s) 1473
BslI CCNNNNNNNGG 5 cut(s) 98, 350, 569, 945, 1126
BsmAI GTCTC 3 cut(s) 528, 1393, 1725
BsmFI GGGAC 1 cut(s) 1473
BsnI GGCC 5 cut(s) 446, 911, 1675, 1704, 1849
Bso31I GGTCTC 1 cut(s) 1725
BsoBI CYCGRG 1 cut(s) 713
Bsp1286I GDGCHC 2 cut(s) 552, 1015
Bsp1407I TGTACA 1 cut(s) 386
Bsp1720I GCTNAGC 1 cut(s) 318
BspACI CCGC 8 cut(s) 24, 53, 62, 137, 328, 359, 883, 1016
BspANI GGCC 5 cut(s) 446, 911, 1675, 1704, 1849
BspCNI CTCAG 6 cut(s) 235, 870, 1143, 1403, 1418, 1735
BspHI TCATGA 1 cut(s) 624
BspLI GGNNCC 6 cut(s) 28, 66, 90, 574, 1118, 1239
BspMAI CTGCAG 3 cut(s) 924, 1210, 1216
BspPI GGATC 7 cut(s) 445, 554, 1111, 1124, 1244, 1295, 1583
BspT107I GGYRCC 1 cut(s) 64
BspTNI GGTCTC 1 cut(s) 1725
BsrBI CCGCTC 1 cut(s) 330
BsrDI GCAATG 1 cut(s) 585
BsrFI RCCGGY 1 cut(s) 1700
BsrGI TGTACA 1 cut(s) 386
BsrI ACTGG 4 cut(s) 692, 874, 1588, 1612
BssAI RCCGGY 1 cut(s) 1700
BssECI CCNNGG 4 cut(s) 714, 1120, 1336, 1751
BssNI GRCGYC 1 cut(s) 1803
BssSI CACGAG 1 cut(s) 117
BssT1I CCWWGG 2 cut(s) 1120, 1336
Bst2BI CACGAG 1 cut(s) 117
Bst2UI CCWGG 2 cut(s) 105, 471
Bst6I CTCTTC 3 cut(s) 78, 734, 1777
BstACI GRCGYC 1 cut(s) 1803
BstAUI TGTACA 1 cut(s) 386
BstC8I GCNNGC 5 cut(s) 131, 153, 1333, 1365, 1702
BstDSI CCRYGG 1 cut(s) 1751
BstENI CCTNNNNNAGG 2 cut(s) 943, 1124
BstF5I GGATG 5 cut(s) 274, 508, 724, 1415, 1606
BstMAI GTCTC 3 cut(s) 528, 1393, 1725
BstMWI GCNNNNNNNGC 6 cut(s) 59, 236, 518, 1214, 1447, 1672
BstNI CCWGG 2 cut(s) 105, 471
BstNSI RCATGY 1 cut(s) 227
BstSCI CCNGG 2 cut(s) 103, 469
BstSFI CTRYAG 5 cut(s) 72, 920, 1206, 1212, 1519
BstSLI GKGCMC 1 cut(s) 552
BstV1I GCAGC 6 cut(s) 251, 1030, 1198, 1220, 1226, 1354
BstV2I GAAGAC 1 cut(s) 1835
BstX2I RGATCY 4 cut(s) 916, 1116, 1287, 1588
BstXI CCANNNNNNTGG 1 cut(s) 1498
BstYI RGATCY 4 cut(s) 916, 1116, 1287, 1588
BsuRI GGCC 5 cut(s) 446, 911, 1675, 1704, 1849
BtgI CCRYGG 1 cut(s) 1751
BtsCI GGATG 5 cut(s) 274, 508, 724, 1415, 1606
BtsIMutI CAGTG 4 cut(s) 532, 1516, 1746, 1770
Cac8I GCNNGC 5 cut(s) 131, 153, 1333, 1365, 1702
CaiI CAGNNNCTG 2 cut(s) 242, 836
CciI TCATGA 1 cut(s) 624
Cfr10I RCCGGY 1 cut(s) 1700
Cfr13I GGNCC 5 cut(s) 101, 107, 341, 910, 1703
CseI GACGC 1 cut(s) 122
Csp6I GTAC 4 cut(s) 387, 631, 685, 1605
CspCI CAANNNNNGTGG 2 cut(s) 1054, 1089
CviAII CATG 6 cut(s) 224, 404, 448, 625, 1465, 1667
CviQI GTAC 4 cut(s) 387, 631, 685, 1605
DraI TTTAAA 1 cut(s) 733
EaeI YGGCCR 1 cut(s) 444
Eam1104I CTCTTC 3 cut(s) 78, 734, 1777
EarI CTCTTC 3 cut(s) 78, 734, 1777
EciI GGCGGA 1 cut(s) 39
Eco130I CCWWGG 2 cut(s) 1120, 1336
Eco147I AGGCCT 1 cut(s) 1849
Eco31I GGTCTC 1 cut(s) 1725
Eco47I GGWCC 3 cut(s) 101, 107, 341
Eco57I CTGAAG 3 cut(s) 63, 758, 1344
Eco88I CYCGRG 1 cut(s) 713
EcoNI CCTNNNNNAGG 2 cut(s) 943, 1124
EcoRII CCWGG 2 cut(s) 103, 469
EcoT14I CCWWGG 2 cut(s) 1120, 1336
EcoT22I ATGCAT 2 cut(s) 207, 1443
ErhI CCWWGG 2 cut(s) 1120, 1336
FaeI CATG 6 cut(s) 227, 407, 451, 628, 1468, 1670
FalI AAGNNNNNCTT 4 cut(s) 144, 176, 501, 533
FaqI GGGAC 1 cut(s) 1473
FatI CATG 6 cut(s) 223, 403, 447, 624, 1464, 1666
FauI CCCGC 1 cut(s) 876
FauNDI CATATG 1 cut(s) 606
FbaI TGATCA 2 cut(s) 400, 1174
FblI GTMKAC 1 cut(s) 489
Fnu4HI GCNGC 6 cut(s) 240, 1019, 1209, 1212, 1215, 1368
FokI GGATG 5 cut(s) 281, 515, 731, 1402, 1613
Fsp4HI GCNGC 6 cut(s) 240, 1019, 1209, 1212, 1215, 1368
FspBI CTAG 2 cut(s) 356, 1757
GluI GCNGC 6 cut(s) 240, 1019, 1209, 1212, 1215, 1368
GsuI CTGGAG 3 cut(s) 709, 1605, 1629
HaeIII GGCC 5 cut(s) 446, 911, 1675, 1704, 1849
HapII CCGG 1 cut(s) 1701
HgaI GACGC 1 cut(s) 122
Hin1I GRCGYC 1 cut(s) 1803
Hin1II CATG 6 cut(s) 227, 407, 451, 628, 1468, 1670
HincII GTYRAC 1 cut(s) 430
HindII GTYRAC 1 cut(s) 430
HindIII AAGCTT 2 cut(s) 153, 1469
HpaII CCGG 1 cut(s) 1701
HphI GGTGA 5 cut(s) 674, 811, 1184, 1466, 1870
Hpy166II GTNNAC 7 cut(s) 430, 490, 550, 727, 815, 875, 1680
Hpy188I TCNGA 9 cut(s) 39, 101, 646, 1152, 1254, 1305, 1393, 1565, 1887
Hpy188III TCNNGA 7 cut(s) 161, 209, 625, 713, 806, 836, 1424
Hpy8I GTNNAC 7 cut(s) 430, 490, 550, 727, 815, 875, 1680
Hpy99I CGWCG 1 cut(s) 1808
HpyAV CCTTC 4 cut(s) 183, 344, 1430, 1786
HpyCH4IV ACGT 2 cut(s) 1431, 1803
HpyF10VI GCNNNNNNNGC 6 cut(s) 59, 236, 518, 1214, 1447, 1672
HpySE526I ACGT 2 cut(s) 1431, 1803
Hsp92I GRCGYC 1 cut(s) 1803
Hsp92II CATG 6 cut(s) 227, 407, 451, 628, 1468, 1670
KroI GCCGGC 1 cut(s) 1700
KroNI GCCGGC 1 cut(s) 1702
Ksp22I TGATCA 2 cut(s) 400, 1174
LmnI GCTCC 7 cut(s) 88, 118, 335, 838, 940, 1018, 1237
Lsp1109I GCAGC 6 cut(s) 251, 1030, 1198, 1220, 1226, 1354
LweI GCATC 3 cut(s) 214, 922, 1318
MaeI CTAG 2 cut(s) 356, 1757
MaeII ACGT 2 cut(s) 1431, 1803
MaeIII GTNAC 7 cut(s) 217, 272, 527, 662, 897, 1454, 1876
MbiI CCGCTC 1 cut(s) 330
MfeI CAATTG 1 cut(s) 345
MflI RGATCY 4 cut(s) 916, 1116, 1287, 1588
MhlI GDGCHC 2 cut(s) 552, 1015
MlsI TGGCCA 1 cut(s) 446
MluNI TGGCCA 1 cut(s) 446
MlyI GAGTC 3 cut(s) 530, 811, 905
MmeI TCCRAC 5 cut(s) 62, 79, 600, 1277, 1283
Mox20I TGGCCA 1 cut(s) 446
Mph1103I ATGCAT 2 cut(s) 207, 1443
MroNI GCCGGC 1 cut(s) 1700
MscI TGGCCA 1 cut(s) 446
MseI TTAA 6 cut(s) 411, 618, 732, 1275, 1353, 1872
MslI CAYNNNNRTG 5 cut(s) 210, 555, 797, 1463, 1739
Msp20I TGGCCA 1 cut(s) 446
MspA1I CMGCKG 2 cut(s) 242, 1211
MspI CCGG 1 cut(s) 1701
MspR9I CCNGG 2 cut(s) 105, 471
MunI CAATTG 1 cut(s) 345
MvaI CCWGG 2 cut(s) 105, 471
MwoI GCNNNNNNNGC 6 cut(s) 59, 236, 518, 1214, 1447, 1672
NaeI GCCGGC 1 cut(s) 1702
NdeI CATATG 1 cut(s) 606
NgoMIV GCCGGC 1 cut(s) 1700
NlaIII CATG 6 cut(s) 227, 407, 451, 628, 1468, 1670
NlaIV GGNNCC 6 cut(s) 28, 66, 90, 574, 1118, 1239
NmuCI GTSAC 6 cut(s) 272, 527, 662, 897, 1454, 1876
NsiI ATGCAT 2 cut(s) 207, 1443
NspI RCATGY 1 cut(s) 227
OliI CACNNNNGTG 1 cut(s) 1739
PagI TCATGA 1 cut(s) 624
PceI AGGCCT 1 cut(s) 1849
PciI ACATGT 1 cut(s) 223
PcsI WCGNNNNNNNCGW 1 cut(s) 847
PdiI GCCGGC 1 cut(s) 1702
PfeI GAWTC 7 cut(s) 11, 34, 164, 610, 675, 847, 1201
PkrI GCNGC 6 cut(s) 241, 1020, 1210, 1213, 1216, 1369
PleI GAGTC 3 cut(s) 530, 810, 904
PpsI GAGTC 3 cut(s) 530, 810, 904
PscI ACATGT 1 cut(s) 223
PsiI TTATAA 2 cut(s) 254, 767
Psp6I CCWGG 2 cut(s) 103, 469
PspGI CCWGG 2 cut(s) 103, 469
PspN4I GGNNCC 6 cut(s) 28, 66, 90, 574, 1118, 1239
PspPI GGNCC 5 cut(s) 101, 107, 341, 910, 1703
PstI CTGCAG 3 cut(s) 924, 1210, 1216
PstNI CAGNNNCTG 2 cut(s) 242, 836
PsuI RGATCY 4 cut(s) 916, 1116, 1287, 1588
PvuII CAGCTG 2 cut(s) 242, 1211
RsaI GTAC 4 cut(s) 388, 632, 686, 1606
RsaNI GTAC 4 cut(s) 387, 631, 685, 1605
RseI CAYNNNNRTG 5 cut(s) 210, 555, 797, 1463, 1739
SaqAI TTAA 6 cut(s) 411, 618, 732, 1275, 1353, 1872
SatI GCNGC 6 cut(s) 240, 1019, 1209, 1212, 1215, 1368
Sau96I GGNCC 5 cut(s) 101, 107, 341, 910, 1703
ScaI AGTACT 1 cut(s) 686
SchI GAGTC 3 cut(s) 530, 811, 905
ScrFI CCNGG 2 cut(s) 105, 471
SduI GDGCHC 2 cut(s) 552, 1015
SfaNI GCATC 3 cut(s) 214, 922, 1318
SfcI CTRYAG 5 cut(s) 72, 920, 1206, 1212, 1519
SinI GGWCC 3 cut(s) 101, 107, 341
SmiMI CAYNNNNRTG 5 cut(s) 210, 555, 797, 1463, 1739
SseBI AGGCCT 1 cut(s) 1849
SsiI CCGC 8 cut(s) 24, 53, 62, 137, 328, 359, 883, 1016
SspMI CTAG 2 cut(s) 356, 1757
StuI AGGCCT 1 cut(s) 1849
StyD4I CCNGG 2 cut(s) 103, 469
StyI CCWWGG 2 cut(s) 1120, 1336
TaiI ACGT 2 cut(s) 1434, 1806
TaqI TCGA 3 cut(s) 147, 208, 309
TaqII GACCGA 2 cut(s) 329, 546
TatI WGTACW 3 cut(s) 386, 630, 684
TfiI GAWTC 7 cut(s) 11, 34, 164, 610, 675, 847, 1201
Tru1I TTAA 6 cut(s) 411, 618, 732, 1275, 1353, 1872
Tru9I TTAA 6 cut(s) 411, 618, 732, 1275, 1353, 1872
TscAI CASTG 4 cut(s) 532, 1523, 1746, 1777
TseFI GTSAC 6 cut(s) 272, 527, 662, 897, 1454, 1876
TseI GCWGC 6 cut(s) 239, 1018, 1208, 1211, 1214, 1367
Tsp45I GTSAC 6 cut(s) 272, 527, 662, 897, 1454, 1876
TspDTI ATGAA 8 cut(s) 623, 641, 1053, 1155, 1242, 1389, 1481, 1720
TspGWI ACGGA 1 cut(s) 443
TspRI CASTG 4 cut(s) 532, 1523, 1746, 1777
VneI GTGCAC 1 cut(s) 548
VpaK11BI GGWCC 3 cut(s) 101, 107, 341
XagI CCTNNNNNAGG 2 cut(s) 943, 1124
XapI RAATTY 4 cut(s) 281, 1090, 1504, 1634
XceI RCATGY 1 cut(s) 227
XmiI GTMKAC 1 cut(s) 489
XspI CTAG 2 cut(s) 356, 1757
ZraI GACGTC 1 cut(s) 1804
ZrmI AGTACT 1 cut(s) 686
Zsp2I ATGCAT 2 cut(s) 207, 1443
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.