FvH4_3g24280

Peptidylprolyl isomerase domain and WD repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0009586
Physical Location & Seq
Reverse (-)
17268630 .. 17277871
9242 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g24280.t3

Sequence Viewer

Length: 1932 bp
ATGGAGGAGGAGCCTCAGAACGGTAGCACGATCGCTGCGGAGAGTGAGGATGAGCCGATAGTCGGTCCCGGCCCAGCGCCTCGTGCTCGGCCCAAGCGGCCTCTTCAGTTCGAGCAGGCTTACCTCGACGCATTACCCTCCGCTCTCATGTATGAGAAGAGTTATATGCACCGAGATGTGGTTACTCATGTTGCTGTGTCCCCGGCCGAATTTGTGGTCACTGGAAGTGTTGATGGACACTTGAAGTTTTGGAAGAAAAAGCCCATTGGCATTGAATTTGCAAAGCATTTTAGGTCCCACCTTGGTCCCATTGAAGGTCTAGCTGTTAGTGCTGATGGTTTGCTTTGCTGTACAATTTCAAATGATCTTTCTGTGAAGATATATGATGTTGTCAACTATGATATGATGGCCATGATTCAAACATCCTTTGTTCCTGGTGCTGTTGAGTGGGTCTATAAACAAGGGGATGTCAAAGCTAGGCTTGCCATCAGTGATAGAAACTCATCATCCGTACACATTTTTGATGCAAGGGCTGGTGAAAATAAACCTTTAATATCCAGAAAGATACACTTGGGGCCGGTGAAAATCATGAAATACAATCATGAATATGATACAGTGATATCAGCTGATGAGAAGGGAATGATTGAATATTGGAATCCTGCTACACTTGAGTTCCCAGAGAATGGGATGAAATTCAGATTCAAAAGTGACACAAATCTCTTTGACATTGTGAAATGCAAAACTTCAGTTTCTTCTATTGAGGTTAGTCCAGATGGCAAACAATTTTCGGTTACTTCACCTGATCGTAGGATACGTGTATTTTGGTTTCTAACTGGTAAAATACGTCGAGTTTATGATGAATCCCTTGAGGTGGCCCAGGATCTCCAAAGAAGTGTCGTACCTTTGTACCAGCTGGAAGCTATAGACTTTGGTCGAAGAATGGCTGTTGAGAAGGAAATAGAGAAAACAGAAACTGCACCACAGCCGAATGCAGTTTTTGATGAGAGCTCAAATTTTCTTATATATCCAACTCTTCTTGGGATAAAAGTTGTAAACTTACAAACTAATAAAGTTGCCCGCATTCTGGGAAAAGTGGAAAACAATGATAGGTTTTTGAGAATTGCCTTGTACCAAGGTGACAGAAGCAGTAAAAAAGTTAGAAAAATTCCTGCAGCTGCAGCAAATGCCAATGAGAGTAAAGAGCCTCTGTCAGATCCCACTCTCATATGTTGTGCCTTCAAGAAACACAGAATATATCTGTTCAGCTGGTCTTCTACATTTGACACCATTCCTCAGGGACTATTTGATCTGATTGCTCTTCTTTGTGCTCTAATCAGTCAAAGAGAACCGGAAGAGCCTGAAGATGCAACCAAGGGAAGAGATGTGTTTAATGAGAAGCCTCCTGCTGATGAACTCTTGGCTGCCTCTGATATAGGCAAATCAGTCACAACGTCCCTACCTGACAATGTGATTATACATACAACAATGGGTGACATACACATGAAGTTGTATCCAGAAGAATGCCCTAAAACTGTGGAGAACTTCACAACACATTGCCGGAATGGCTATTATGATAACCTCATATTTCATCGCGTCATCAAAGGTTTCATGATACAAACAGGAGATCCTTTGGGAGATGGTACTGGTGGCCAATCTATTTGGGGAAGGGAGTTTGAGGATGAATTTCACAAAAGTTTACGACATGATAGGCCTTTTACGGTATCAATGGCAAATGCTGGCCAAAACACAAATGGATCTCAGTTCTTTATCACAACAGTAGCCACTCCGTGGCTGGACAACAAGCACACAGTTTTTGGAAGAGTGATTAAGGGAATGGATGTTGTTCAGGCTATAGAAAAAGTAAAGACAAACAAGGATGACAAGCCCCACCAAGATGTGAAAATTCTGAATGTCACTGTCCCCAAGTCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000413 GO:0003002 GO:0003006 GO:0003674 GO:0003682 GO:0003755 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0006464 GO:0006807 GO:0007275 GO:0007389 GO:0008144 GO:0008150 GO:0008152 GO:0009653 GO:0009791 GO:0009888 GO:0009908 GO:0009909 GO:0009933 GO:0009965 GO:0009987 GO:0010015 GO:0010016 GO:0010051 GO:0010073 GO:0010075 GO:0010082 GO:0010305 GO:0010338 GO:0010358 GO:0016018 GO:0016604 GO:0016853 GO:0016859 GO:0018193 GO:0018208 GO:0019222 GO:0019538 GO:0022414 GO:0022622 GO:0031056 GO:0031060 GO:0031323 GO:0031399 GO:0031974 GO:0031981 GO:0032268 GO:0032501 GO:0032502 GO:0032991 GO:0033043 GO:0033044 GO:0033218 GO:0036211 GO:0040008 GO:0042277 GO:0042393 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0048364 GO:0048366 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048442 GO:0048443 GO:0048444 GO:0048447 GO:0048449 GO:0048453 GO:0048464 GO:0048466 GO:0048467 GO:0048507 GO:0048509 GO:0048532 GO:0048580 GO:0048608 GO:0048638 GO:0048646 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051128 GO:0051171 GO:0051239 GO:0051246 GO:0060255 GO:0061458 GO:0065007 GO:0070013 GO:0071013 GO:0071704 GO:0080090 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0099402 GO:0140096 GO:1901564 GO:1902275 GO:1902494 GO:1905392 GO:1905393 GO:1990904 GO:2000026 GO:2000241 GO:2000280
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pro_isomerase WD40

Protein Analysis

644

Amino Acids

72.22

Weight (kDa)

6.31

Isoelectric Point (pI)

41.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pro_isomerase PF00160 332 - 482 5.5e-57 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 683, 1788
AccBSI CCGCTC 1 cut(s) 143
AccII CGCG 1 cut(s) 1593
AciI CCGC 4 cut(s) 38, 97, 141, 1078
AclWI GGATC 4 cut(s) 888, 1208, 1619, 1762
AcoI YGGCCR 4 cut(s) 204, 408, 1648, 1738
AcsI RAATTY 7 cut(s) 209, 275, 692, 1012, 1164, 1682, 1902
AcuI CTGAAG 3 cut(s) 89, 729, 1380
AdeI CACNNNGTG 1 cut(s) 1788
AfaI GTAC 6 cut(s) 352, 513, 900, 908, 1130, 1642
AfiI CCNNNNNNNGG 8 cut(s) 20, 62, 178, 314, 683, 871, 1084, 1788
AflIII ACRYGT 1 cut(s) 814
AgsI TTSAA 8 cut(s) 244, 275, 314, 360, 419, 647, 703, 1240
AjnI CCWGG 2 cut(s) 433, 876
AluBI AGCT 8 cut(s) 323, 476, 626, 913, 920, 1008, 1175, 1266
AluI AGCT 8 cut(s) 323, 476, 626, 913, 920, 1008, 1175, 1266
Alw21I GWGCWC 3 cut(s) 88, 1010, 1330
AlwI GGATC 4 cut(s) 888, 1208, 1619, 1762
AlwNI CAGNNNCTG 1 cut(s) 974
ApeKI GCWGC 5 cut(s) 35, 1172, 1175, 1178, 1421
ApoI RAATTY 7 cut(s) 209, 275, 692, 1012, 1164, 1682, 1902
ArsI GACNNNNNNTTYG 2 cut(s) 201, 233
AspLEI GCGC 1 cut(s) 79
AspS9I GGNCC 7 cut(s) 65, 71, 90, 294, 305, 575, 874
AsuC2I CCSGG 2 cut(s) 69, 203
AsuHPI GGTGA 5 cut(s) 548, 592, 789, 1148, 1502
AvaII GGWCC 3 cut(s) 65, 294, 305
AxyI CCTNAGG 1 cut(s) 1293
BaeI ACNNNNGTAYC 2 cut(s) 890, 923
BalI TGGCCA 3 cut(s) 410, 1650, 1740
BanII GRGCYC 1 cut(s) 1010
BauI CACGAG 1 cut(s) 81
BbsI GAAGAC 1 cut(s) 1263
Bbv12I GWGCWC 3 cut(s) 88, 1010, 1330
BbvI GCAGC 5 cut(s) 22, 1162, 1184, 1190, 1408
BccI CCATC 6 cut(s) 227, 329, 400, 494, 767, 1631
BciT130I CCWGG 2 cut(s) 435, 878
BciVI GTATCC 2 cut(s) 804, 1521
BcnI CCSGG 2 cut(s) 69, 203
BfaI CTAG 2 cut(s) 320, 477
BfmI CTRYAG 4 cut(s) 921, 1170, 1176, 1851
BfoI RGCGCY 1 cut(s) 80
BfuI GTATCC 2 cut(s) 804, 1521
BglI GCCNNNNNGGC 2 cut(s) 97, 1563
BisI GCNGC 6 cut(s) 36, 98, 1173, 1176, 1179, 1422
BlsI GCNGC 6 cut(s) 37, 99, 1174, 1177, 1180, 1423
Bme1390I CCNGG 4 cut(s) 69, 203, 435, 878
Bme18I GGWCC 3 cut(s) 65, 294, 305
BmgT120I GGNCC 7 cut(s) 65, 71, 90, 294, 305, 575, 874
BmiI GGNNCC 5 cut(s) 12, 67, 296, 307, 576
BmrFI CCNGG 4 cut(s) 69, 203, 435, 878
BmsI GCATC 2 cut(s) 514, 1354
BoxI GACNNNNGTC 1 cut(s) 930
BpiI GAAGAC 1 cut(s) 1263
BpuEI CTTGAG 2 cut(s) 689, 887
BpuMI CCSGG 2 cut(s) 69, 203
BsaAI YACGTR 1 cut(s) 815
BsaJI CCNNGG 6 cut(s) 201, 301, 876, 1132, 1371, 1787
BsaWI WCCGGW 1 cut(s) 1348
Bsc4I CCNNNNNNNGG 8 cut(s) 20, 62, 178, 314, 683, 871, 1084, 1788
Bse118I RCCGGY 1 cut(s) 577
Bse1I ACTGG 3 cut(s) 226, 838, 1648
Bse21I CCTNAGG 1 cut(s) 1293
Bse3DI GCAATG 1 cut(s) 1552
BseBI CCWGG 2 cut(s) 435, 878
BseDI CCNNGG 6 cut(s) 201, 301, 876, 1132, 1371, 1787
BseGI GGATG 8 cut(s) 55, 422, 472, 506, 693, 1684, 1843, 1882
BseLI CCNNNNNNNGG 8 cut(s) 20, 62, 178, 314, 683, 871, 1084, 1788
BseMI GCAATG 1 cut(s) 1552
BseMII CTCAG 3 cut(s) 29, 1307, 1772
BseNI ACTGG 3 cut(s) 226, 838, 1648
BseRI GAGGAG 2 cut(s) 20, 23
BseX3I CGGCCG 1 cut(s) 204
BseXI GCAGC 5 cut(s) 22, 1162, 1184, 1190, 1408
BseYI CCCAGC 1 cut(s) 73
BsgI GTGCAG 1 cut(s) 960
Bsh1236I CGCG 1 cut(s) 1593
Bsh1285I CGRYCG 2 cut(s) 33, 207
BsiEI CGRYCG 2 cut(s) 33, 207
BsiHKAI GWGCWC 3 cut(s) 88, 1010, 1330
BsiSI CCGG 5 cut(s) 69, 203, 578, 1349, 1558
BslFI GGGAC 7 cut(s) 51, 184, 280, 291, 1311, 1438, 1904
BslI CCNNNNNNNGG 8 cut(s) 20, 62, 178, 314, 683, 871, 1084, 1788
BsmFI GGGAC 7 cut(s) 51, 184, 280, 291, 1311, 1438, 1904
BsmI GAATGC 3 cut(s) 994, 1080, 1526
Bsp1286I GDGCHC 3 cut(s) 88, 1010, 1330
Bsp1407I TGTACA 1 cut(s) 350
Bsp143I GATC 8 cut(s) 30, 364, 802, 880, 1213, 1306, 1624, 1754
BspACI CCGC 4 cut(s) 38, 97, 141, 1078
BspCNI CTCAG 3 cut(s) 28, 1306, 1771
BspFNI CGCG 1 cut(s) 1593
BspHI TCATGA 3 cut(s) 588, 601, 1608
BspLI GGNNCC 5 cut(s) 12, 67, 296, 307, 576
BspMAI CTGCAG 2 cut(s) 1174, 1180
BspPI GGATC 4 cut(s) 888, 1208, 1619, 1762
BspQI GCTCTTC 2 cut(s) 1323, 1347
BsrBI CCGCTC 1 cut(s) 143
BsrDI GCAATG 1 cut(s) 1552
BsrFI RCCGGY 1 cut(s) 577
BsrGI TGTACA 1 cut(s) 350
BsrI ACTGG 3 cut(s) 226, 838, 1648
BssAI RCCGGY 1 cut(s) 577
BssECI CCNNGG 6 cut(s) 201, 301, 876, 1132, 1371, 1787
BssMI GATC 8 cut(s) 30, 364, 802, 880, 1213, 1306, 1624, 1754
BssSI CACGAG 1 cut(s) 81
BssT1I CCWWGG 3 cut(s) 301, 1132, 1371
Bst2BI CACGAG 1 cut(s) 81
Bst2UI CCWGG 2 cut(s) 435, 878
Bst4CI ACNGT 7 cut(s) 23, 616, 1534, 1720, 1777, 1810, 1918
Bst6I CTCTTC 7 cut(s) 108, 152, 1038, 1323, 1347, 1372, 1813
BstAPI GCANNNNNTGC 1 cut(s) 1184
BstAUI TGTACA 1 cut(s) 350
BstBAI YACGTR 1 cut(s) 815
BstC8I GCNNGC 4 cut(s) 117, 483, 1078, 1738
BstDEI CTNAG 3 cut(s) 15, 1293, 1758
BstDSI CCRYGG 1 cut(s) 1787
BstF5I GGATG 8 cut(s) 55, 422, 472, 506, 693, 1684, 1843, 1882
BstFNI CGCG 1 cut(s) 1593
BstH2I RGCGCY 1 cut(s) 80
BstHHI GCGC 1 cut(s) 79
BstKTI GATC 8 cut(s) 33, 367, 805, 883, 1216, 1309, 1627, 1757
BstMBI GATC 8 cut(s) 30, 364, 802, 880, 1213, 1306, 1624, 1754
BstMCI CGRYCG 2 cut(s) 33, 207
BstMWI GCNNNNNNNGC 7 cut(s) 83, 97, 329, 482, 1178, 1184, 1563
BstNI CCWGG 2 cut(s) 435, 878
BstPAI GACNNNNGTC 1 cut(s) 930
BstSCI CCNGG 4 cut(s) 67, 201, 433, 876
BstSFI CTRYAG 4 cut(s) 921, 1170, 1176, 1851
BstUI CGCG 1 cut(s) 1593
BstV1I GCAGC 5 cut(s) 22, 1162, 1184, 1190, 1408
BstV2I GAAGAC 1 cut(s) 1263
BstX2I RGATCY 4 cut(s) 880, 1213, 1624, 1754
BstYI RGATCY 4 cut(s) 880, 1213, 1624, 1754
BstZI CGGCCG 1 cut(s) 204
Bsu36I CCTNAGG 1 cut(s) 1293
BsuI GTATCC 2 cut(s) 804, 1521
BtgI CCRYGG 1 cut(s) 1787
BtgZI GCGATG 1 cut(s) 1574
BtsCI GGATG 8 cut(s) 55, 422, 472, 506, 693, 1684, 1843, 1882
BtsIMutI CAGTG 4 cut(s) 219, 496, 621, 1914
Cac8I GCNNGC 4 cut(s) 117, 483, 1078, 1738
CaiI CAGNNNCTG 1 cut(s) 974
CciI TCATGA 3 cut(s) 588, 601, 1608
CfoI GCGC 1 cut(s) 79
Cfr10I RCCGGY 1 cut(s) 577
Cfr13I GGNCC 7 cut(s) 65, 71, 90, 294, 305, 575, 874
CseI GACGC 2 cut(s) 137, 1582
Csp6I GTAC 6 cut(s) 351, 512, 899, 907, 1129, 1641
CviAII CATG 8 cut(s) 148, 188, 412, 589, 602, 1501, 1609, 1703
CviQI GTAC 6 cut(s) 351, 512, 899, 907, 1129, 1641
DdeI CTNAG 3 cut(s) 15, 1293, 1758
DpnI GATC 8 cut(s) 32, 366, 804, 882, 1215, 1308, 1626, 1756
DpnII GATC 8 cut(s) 30, 364, 802, 880, 1213, 1306, 1624, 1754
DraIII CACNNNGTG 1 cut(s) 1788
EaeI YGGCCR 4 cut(s) 204, 408, 1648, 1738
EagI CGGCCG 1 cut(s) 204
Eam1104I CTCTTC 7 cut(s) 108, 152, 1038, 1323, 1347, 1372, 1813
EarI CTCTTC 7 cut(s) 108, 152, 1038, 1323, 1347, 1372, 1813
Ecl136II GAGCTC 1 cut(s) 1008
EclXI CGGCCG 1 cut(s) 204
Eco130I CCWWGG 3 cut(s) 301, 1132, 1371
Eco147I AGGCCT 1 cut(s) 1711
Eco24I GRGCYC 1 cut(s) 1010
Eco32I GATATC 1 cut(s) 621
Eco47I GGWCC 3 cut(s) 65, 294, 305
Eco52I CGGCCG 1 cut(s) 204
Eco53kI GAGCTC 1 cut(s) 1008
Eco57I CTGAAG 3 cut(s) 89, 729, 1380
Eco81I CCTNAGG 1 cut(s) 1293
EcoICRI GAGCTC 1 cut(s) 1008
EcoO109I RGGNCCY 1 cut(s) 294
EcoRII CCWGG 2 cut(s) 433, 876
EcoRV GATATC 1 cut(s) 621
EcoT14I CCWWGG 3 cut(s) 301, 1132, 1371
EcoT38I GRGCYC 1 cut(s) 1010
ErhI CCWWGG 3 cut(s) 301, 1132, 1371
FaeI CATG 8 cut(s) 151, 191, 415, 592, 605, 1504, 1612, 1706
FalI AAGNNNNNCTT 4 cut(s) 465, 497, 554, 586
FaqI GGGAC 7 cut(s) 51, 184, 280, 291, 1311, 1438, 1904
FatI CATG 8 cut(s) 147, 187, 411, 588, 601, 1500, 1608, 1702
FauI CCCGC 1 cut(s) 1085
FauNDI CATATG 1 cut(s) 1226
Fnu4HI GCNGC 6 cut(s) 36, 98, 1173, 1176, 1179, 1422
FokI GGATG 8 cut(s) 62, 409, 479, 493, 700, 1691, 1850, 1889
FriOI GRGCYC 1 cut(s) 1010
Fsp4HI GCNGC 6 cut(s) 36, 98, 1173, 1176, 1179, 1422
FspBI CTAG 2 cut(s) 320, 477
GlaI GCGC 1 cut(s) 78
GluI GCNGC 6 cut(s) 36, 98, 1173, 1176, 1179, 1422
GsaI CCCAGC 1 cut(s) 77
HaeII RGCGCY 1 cut(s) 80
HapII CCGG 5 cut(s) 69, 203, 578, 1349, 1558
HgaI GACGC 2 cut(s) 137, 1582
HhaI GCGC 1 cut(s) 79
Hin1II CATG 8 cut(s) 151, 191, 415, 592, 605, 1504, 1612, 1706
Hin6I GCGC 1 cut(s) 77
HinP1I GCGC 1 cut(s) 77
HincII GTYRAC 1 cut(s) 394
HindII GTYRAC 1 cut(s) 394
HinfI GANTC 4 cut(s) 415, 655, 699, 860
HpaII CCGG 5 cut(s) 69, 203, 578, 1349, 1558
HphI GGTGA 5 cut(s) 548, 592, 789, 1148, 1502
Hpy166II GTNNAC 4 cut(s) 394, 514, 1054, 1697
Hpy188I TCNGA 6 cut(s) 18, 698, 1213, 1311, 1429, 1908
Hpy188III TCNNGA 7 cut(s) 558, 589, 602, 770, 1240, 1514, 1609
Hpy8I GTNNAC 4 cut(s) 394, 514, 1054, 1697
Hpy99I CGWCG 2 cut(s) 131, 849
HpyAV CCTTC 5 cut(s) 308, 628, 946, 1246, 1659
HpyCH4III ACNGT 7 cut(s) 23, 616, 1534, 1720, 1777, 1810, 1918
HpyCH4IV ACGT 3 cut(s) 814, 844, 1451
HpyCH4V TGCA 9 cut(s) 169, 281, 527, 738, 977, 992, 1172, 1178, 1367
HpyF10VI GCNNNNNNNGC 7 cut(s) 83, 97, 329, 482, 1178, 1184, 1563
HpyF3I CTNAG 3 cut(s) 15, 1293, 1758
HpySE526I ACGT 3 cut(s) 814, 844, 1451
Hsp92II CATG 8 cut(s) 151, 191, 415, 592, 605, 1504, 1612, 1706
HspAI GCGC 1 cut(s) 77
Kzo9I GATC 8 cut(s) 30, 364, 802, 880, 1213, 1306, 1624, 1754
LguI GCTCTTC 2 cut(s) 1323, 1347
LmnI GCTCC 1 cut(s) 10
Lsp1109I GCAGC 5 cut(s) 22, 1162, 1184, 1190, 1408
LweI GCATC 2 cut(s) 514, 1354
MaeI CTAG 2 cut(s) 320, 477
MaeII ACGT 3 cut(s) 814, 844, 1451
MaeIII GTNAC 8 cut(s) 181, 217, 707, 790, 1136, 1444, 1490, 1912
MalI GATC 8 cut(s) 32, 366, 804, 882, 1215, 1308, 1626, 1756
MbiI CCGCTC 1 cut(s) 143
MboI GATC 8 cut(s) 30, 364, 802, 880, 1213, 1306, 1624, 1754
MflI RGATCY 4 cut(s) 880, 1213, 1624, 1754
MhlI GDGCHC 3 cut(s) 88, 1010, 1330
MlsI TGGCCA 3 cut(s) 410, 1650, 1740
MluNI TGGCCA 3 cut(s) 410, 1650, 1740
MmeI TCCRAC 1 cut(s) 1052
Mox20I TGGCCA 3 cut(s) 410, 1650, 1740
MscI TGGCCA 3 cut(s) 410, 1650, 1740
MseI TTAA 4 cut(s) 551, 1389, 1827, 1930
MslI CAYNNNNRTG 4 cut(s) 174, 606, 1499, 1893
Msp20I TGGCCA 3 cut(s) 410, 1650, 1740
MspA1I CMGCKG 4 cut(s) 626, 913, 1175, 1266
MspI CCGG 5 cut(s) 69, 203, 578, 1349, 1558
MspR9I CCNGG 4 cut(s) 69, 203, 435, 878
Mva1269I GAATGC 3 cut(s) 994, 1080, 1526
MvaI CCWGG 2 cut(s) 435, 878
MvnI CGCG 1 cut(s) 1593
MwoI GCNNNNNNNGC 7 cut(s) 83, 97, 329, 482, 1178, 1184, 1563
NciI CCSGG 2 cut(s) 69, 203
NdeI CATATG 1 cut(s) 1226
NdeII GATC 8 cut(s) 30, 364, 802, 880, 1213, 1306, 1624, 1754
NlaIII CATG 8 cut(s) 151, 191, 415, 592, 605, 1504, 1612, 1706
NlaIV GGNNCC 5 cut(s) 12, 67, 296, 307, 576
NmeAIII GCCGAG 1 cut(s) 67
NmuCI GTSAC 6 cut(s) 217, 707, 1136, 1444, 1490, 1912
PagI TCATGA 3 cut(s) 588, 601, 1608
PceI AGGCCT 1 cut(s) 1711
PciSI GCTCTTC 2 cut(s) 1323, 1347
PcsI WCGNNNNNNNCGW 1 cut(s) 811
PctI GAATGC 3 cut(s) 994, 1080, 1526
PfeI GAWTC 4 cut(s) 415, 655, 699, 860
PflMI CCANNNNNTGG 2 cut(s) 683, 1788
PkrI GCNGC 6 cut(s) 37, 99, 1174, 1177, 1180, 1423
Ple19I CGATCG 1 cut(s) 33
Ppu21I YACGTR 1 cut(s) 815
PpuMI RGGWCCY 1 cut(s) 294
PshAI GACNNNNGTC 1 cut(s) 930
Psp124BI GAGCTC 1 cut(s) 1010
Psp5II RGGWCCY 1 cut(s) 294
Psp6I CCWGG 2 cut(s) 433, 876
PspFI CCCAGC 1 cut(s) 73
PspGI CCWGG 2 cut(s) 433, 876
PspN4I GGNNCC 5 cut(s) 12, 67, 296, 307, 576
PspPI GGNCC 7 cut(s) 65, 71, 90, 294, 305, 575, 874
PspPPI RGGWCCY 1 cut(s) 294
PstI CTGCAG 2 cut(s) 1174, 1180
PstNI CAGNNNCTG 1 cut(s) 974
PsuI RGATCY 4 cut(s) 880, 1213, 1624, 1754
PvuI CGATCG 1 cut(s) 33
PvuII CAGCTG 4 cut(s) 626, 913, 1175, 1266
RsaI GTAC 6 cut(s) 352, 513, 900, 908, 1130, 1642
RsaNI GTAC 6 cut(s) 351, 512, 899, 907, 1129, 1641
RseI CAYNNNNRTG 4 cut(s) 174, 606, 1499, 1893
SacI GAGCTC 1 cut(s) 1010
SapI GCTCTTC 2 cut(s) 1323, 1347
SaqAI TTAA 4 cut(s) 551, 1389, 1827, 1930
SatI GCNGC 6 cut(s) 36, 98, 1173, 1176, 1179, 1422
Sau3AI GATC 8 cut(s) 30, 364, 802, 880, 1213, 1306, 1624, 1754
Sau96I GGNCC 7 cut(s) 65, 71, 90, 294, 305, 575, 874
ScrFI CCNGG 4 cut(s) 69, 203, 435, 878
SduI GDGCHC 3 cut(s) 88, 1010, 1330
SfaNI GCATC 2 cut(s) 514, 1354
SfcI CTRYAG 4 cut(s) 921, 1170, 1176, 1851
SfiI GGCCNNNNNGGCC 1 cut(s) 97
SinI GGWCC 3 cut(s) 65, 294, 305
SmiMI CAYNNNNRTG 4 cut(s) 174, 606, 1499, 1893
SmlI CTYRAG 2 cut(s) 668, 866
SmoI CTYRAG 2 cut(s) 668, 866
SseBI AGGCCT 1 cut(s) 1711
SsiI CCGC 4 cut(s) 38, 97, 141, 1078
SspI AATATT 1 cut(s) 650
SspMI CTAG 2 cut(s) 320, 477
SstI GAGCTC 1 cut(s) 1010
StuI AGGCCT 1 cut(s) 1711
StyD4I CCNGG 4 cut(s) 67, 201, 433, 876
StyI CCWWGG 3 cut(s) 301, 1132, 1371
TaaI ACNGT 7 cut(s) 23, 616, 1534, 1720, 1777, 1810, 1918
TaiI ACGT 3 cut(s) 817, 847, 1454
TaqI TCGA 4 cut(s) 111, 126, 847, 934
TaqII GACCGA 1 cut(s) 53
TatI WGTACW 1 cut(s) 350
TauI GCSGC 1 cut(s) 100
TfiI GAWTC 4 cut(s) 415, 655, 699, 860
Tru1I TTAA 4 cut(s) 551, 1389, 1827, 1930
Tru9I TTAA 4 cut(s) 551, 1389, 1827, 1930
TscAI CASTG 4 cut(s) 226, 496, 621, 1921
TseFI GTSAC 6 cut(s) 217, 707, 1136, 1444, 1490, 1912
TseI GCWGC 5 cut(s) 35, 1172, 1175, 1178, 1421
Tsp45I GTSAC 6 cut(s) 217, 707, 1136, 1444, 1490, 1912
TspDTI ATGAA 9 cut(s) 605, 618, 704, 873, 1425, 1517, 1577, 1597, 1695
TspGWI ACGGA 2 cut(s) 499, 1776
TspRI CASTG 4 cut(s) 226, 496, 621, 1921
Van91I CCANNNNNTGG 2 cut(s) 683, 1788
VpaK11BI GGWCC 3 cut(s) 65, 294, 305
XapI RAATTY 7 cut(s) 209, 275, 692, 1012, 1164, 1682, 1902
XcmI CCANNNNNNNNNTGG 2 cut(s) 1748, 1789
XspI CTAG 2 cut(s) 320, 477
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.