MD03G1138000.v1.1

Peptidylprolyl isomerase domain and WD repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
OG0009586
Physical Location & Seq
Forward (+)
14095422 .. 14104165
8744 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1138000.v1.1.491

Sequence Viewer

Length: 1911 bp
ATGGAGGAACCTCAGAACGGAGGAGAAACCCTACCAACATACGCAGAGGAATCCCAGAACGGCAACTCGAGCTCGGCCGTGGTGGAGACCGAGGAGGAGCCCATGGTGGGTCCCGGCCCACCCCCACCCCCTCGCGCTCGACCCAAGCGGCCTCTCCAGTTCGAGCACGCCTACCTCGATGCTCTTCCCTCCGCTCAAATGTACGAGAAAAGTTATATGCACCGGGACGTTGTTACGCATGTTGCTGTGTCGTCGGCGGATTTTGTTGTAACTGGAAGTGTTGATGGACATTTGAAGTTTTGGAAGAAAAAGGCTATTGGCATTGAATTTGCAAAGCATTTTAGGTCCCACCTTGGTCCAATTGAAGGCTTAGCTGTTAGCGTTGATGGTTTGCTTTGCTGTACAATTTCACATGACAAATCTGTGAAGATATATGACGTAGTCAACTATGATATGATGGTCATGATTCGCACAGAGTTTGTTCCTGGTGCTGTTGAGTGGGTCTACAAACAAGGGGATGTCAAAGCCAGGCTTGCCATCAGTGACAGGGACTCATCATATGTACACATTTTCGATGCACGATCTGGTACAAATGAACCTATTATCTCCAGAGAGGTACATTTGGGCCCAGTGAAAGTTATGAAGTATAATCCTGTATTTGATACAGTGATTTCAGCTGATCAACGGGGAATGGTTGAGTATTGGACTCCTGACACCCTTAAGTTTCCAGAGACTGGGGTGAAATTCAGAATGAAAAGTGATACTAATCTGTTTGAAATCCCGAAATGCAAAACTACCGTTTCTTCTATCGAGGTTAGCCCAGATGGTAAGCAATTTTCAATTACTTCGCCCGATCGCAGGATACGTGTATTTTGGTTTAGCACAGGCAAACTACGACGAGTTTATGATGAATCTCTCGAGGTGGCCCAAGATCTCCAGAGAAGTGATGTGCCTTTGTACCAGCTGGAAGCCATCGACTTTGGGCGAAGAATGGCTGTTGAGAGGGAAATTGAGAAAACAGAATCTGCCCCACAGCCGAATGCAGTTTTTGATGAAAGCTCTAATTTTATCATCTATGCAACTCTCCTTGGAATAAAAGTGGTAAATTTACACACTAATAAAGTTTCTCGAATTCTCGGAAAAGTGGAGAATAATGATAGGTTTTTGAGAATTGCCTTATACCAAGGTGACAAAAGCAGTAAAAAAGTTAGAAAAATCCCTGCTGCTGCAGCAAATGTTAATGAAAGCAAAGAGCCTTTGACAGATCCTACTCTCATATGTTGTGCTTTCAAAAAACACAGAATCTATCTATTCAGTCAGAGAGAACCAGAGGAGCCTGAAGATGCAACTAAGGGAAGAGATATATTCAACGAAAAGCCACCTGCTGATGAACTCTTGGCTGCATCAGAGATTGGTAAATCATCCACAACATCTCTTCCTGACAATGTGATTTTGCGTACTACAATGGGTGACATACACATGAAACTGTATCCAGAGGAATGTCCAAAAACTGTGGAGAACTTCACAACACACTGCCGAAATGGCTATTATGATAACCTCATATTTCATCGAGTCATCAAAGGTTTCATGATACAAACGGGAGATCCTTTAGGAGATGGTACTGGTGGGCAATCCATTTGGGGACGGGAGTTTGAGGATGAATTTCATAAAAGTTTACGACACGACAGGCCTTTCACTGTGTCAATGGCAAATGCGGGAGAAAACACAAATGGATCTCAGTTCTTTATCACCACAGTGGCAACTCCTTGGCTTGACAACAAGCACACAGTTTTTGGCAGAGTTATCAAGGGGATGGATGTTGTGCAGGCTATAGAAAAAGTGAAGACAGACAGGGGAGAAAGGCCCCAAGTAGACGTGAAAATTCTGAATGTTACCGTCCCCAAGCCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000413 GO:0003002 GO:0003006 GO:0003674 GO:0003682 GO:0003755 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0006464 GO:0006807 GO:0007275 GO:0007389 GO:0008144 GO:0008150 GO:0008152 GO:0009653 GO:0009791 GO:0009888 GO:0009908 GO:0009909 GO:0009933 GO:0009965 GO:0009987 GO:0010015 GO:0010016 GO:0010051 GO:0010073 GO:0010075 GO:0010082 GO:0010305 GO:0010338 GO:0010358 GO:0016018 GO:0016604 GO:0016853 GO:0016859 GO:0018193 GO:0018208 GO:0019222 GO:0019538 GO:0022414 GO:0022622 GO:0031056 GO:0031060 GO:0031323 GO:0031399 GO:0031974 GO:0031981 GO:0032268 GO:0032501 GO:0032502 GO:0032991 GO:0033043 GO:0033044 GO:0033218 GO:0036211 GO:0040008 GO:0042277 GO:0042393 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0048364 GO:0048366 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048442 GO:0048443 GO:0048444 GO:0048447 GO:0048449 GO:0048453 GO:0048464 GO:0048466 GO:0048467 GO:0048507 GO:0048509 GO:0048532 GO:0048580 GO:0048608 GO:0048638 GO:0048646 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051128 GO:0051171 GO:0051239 GO:0051246 GO:0060255 GO:0061458 GO:0065007 GO:0070013 GO:0071013 GO:0071704 GO:0080090 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0099402 GO:0140096 GO:1901564 GO:1902275 GO:1902494 GO:1905392 GO:1905393 GO:1990904 GO:2000026 GO:2000241 GO:2000280
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pro_isomerase WD40

Protein Analysis

637

Amino Acids

71.58

Weight (kDa)

6.23

Isoelectric Point (pI)

42.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WD40_Prp19 PF24814 65 - 217 1.6e-08 Prp19 WD40 domain
Beta-prop_WDR5 PF25175 73 - 240 1.1e-08 WDR5 beta-propeller domain
Beta-prop_THOC3 PF25174 74 - 303 2.3e-13 THOC3 beta-propeller domain
WDR55 PF24796 80 - 234 1e-06 WDR55
Pro_isomerase PF00160 484 - 633 5.1e-56 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1390
Acc36I ACCTGC 1 cut(s) 1390
AccB7I CCANNNNNTGG 1 cut(s) 734
AccBSI CCGCTC 1 cut(s) 194
AccI GTMKAC 2 cut(s) 504, 1872
AccII CGCG 1 cut(s) 135
AciI CCGC 4 cut(s) 148, 192, 257, 1715
AclWI GGATC 3 cut(s) 1259, 1598, 1741
AcoI YGGCCR 1 cut(s) 75
AcsI RAATTY 6 cut(s) 326, 743, 1105, 1131, 1661, 1881
AcuI CTGAAG 1 cut(s) 1359
AfaI GTAC 8 cut(s) 203, 403, 564, 589, 618, 959, 1459, 1621
AfiI CCNNNNNNNGG 5 cut(s) 17, 107, 365, 734, 858
AflII CTTAAG 1 cut(s) 719
AflIII ACRYGT 1 cut(s) 865
AgsI TTSAA 7 cut(s) 295, 326, 365, 776, 840, 1291, 1369
AjiI CACGTC 1 cut(s) 1876
AjnI CCWGG 2 cut(s) 484, 527
AleI CACNNNNGTG 1 cut(s) 1754
AluBI AGCT 5 cut(s) 72, 374, 677, 964, 1059
AluI AGCT 5 cut(s) 72, 374, 677, 964, 1059
Alw21I GWGCWC 2 cut(s) 74, 168
Alw26I GTCTC 2 cut(s) 80, 725
AlwI GGATC 3 cut(s) 1259, 1598, 1741
AlwNI CAGNNNCTG 2 cut(s) 734, 1025
Ama87I CYCGRG 2 cut(s) 67, 917
AoxI GGCC 7 cut(s) 75, 115, 149, 625, 924, 1688, 1862
ApaI GGGCCC 1 cut(s) 629
ApeKI GCWGC 4 cut(s) 1223, 1226, 1229, 1400
ApoI RAATTY 6 cut(s) 326, 743, 1105, 1131, 1661, 1881
AspLEI GCGC 1 cut(s) 137
AspS9I GGNCC 8 cut(s) 110, 116, 345, 356, 625, 626, 925, 1863
AsuC2I CCSGG 2 cut(s) 114, 224
AsuHPI GGTGA 4 cut(s) 751, 1199, 1481, 1741
AvaI CYCGRG 2 cut(s) 67, 917
AvaII GGWCC 3 cut(s) 110, 345, 356
BaeGI GKGCMC 1 cut(s) 629
BanII GRGCYC 3 cut(s) 74, 102, 629
BbsI GAAGAC 1 cut(s) 1850
Bbv12I GWGCWC 2 cut(s) 74, 168
BbvI GCAGC 4 cut(s) 1210, 1213, 1241, 1387
BccI CCATC 8 cut(s) 278, 380, 451, 545, 818, 980, 1610, 1807
BceAI ACGGC 2 cut(s) 62, 76
BciT130I CCWGG 2 cut(s) 486, 529
BciVI GTATCC 2 cut(s) 855, 1500
BclI TGATCA 1 cut(s) 679
BcnI CCSGG 2 cut(s) 114, 224
BcoDI GTCTC 2 cut(s) 80, 725
BfmI CTRYAG 2 cut(s) 1227, 1830
BfrI CTTAAG 1 cut(s) 719
BfuAI ACCTGC 1 cut(s) 1390
BfuI GTATCC 2 cut(s) 855, 1500
BglI GCCNNNNNGGC 1 cut(s) 1542
BglII AGATCT 1 cut(s) 931
BisI GCNGC 5 cut(s) 149, 1224, 1227, 1230, 1401
BlpI GCTNAGC 1 cut(s) 370
BlsI GCNGC 5 cut(s) 150, 1225, 1228, 1231, 1402
Bme1390I CCNGG 4 cut(s) 114, 224, 486, 529
Bme18I GGWCC 3 cut(s) 110, 345, 356
BmeT110I CYCGRG 2 cut(s) 67, 917
BmgBI CACGTC 1 cut(s) 1876
BmgT120I GGNCC 8 cut(s) 110, 116, 345, 356, 625, 626, 925, 1863
BmiI GGNNCC 8 cut(s) 9, 99, 111, 112, 347, 627, 1335, 1865
BmrFI CCNGG 4 cut(s) 114, 224, 486, 529
BmrI ACTGGG 2 cut(s) 623, 744
BmsI GCATC 4 cut(s) 169, 565, 1333, 1412
BmuI ACTGGG 2 cut(s) 623, 744
BpiI GAAGAC 1 cut(s) 1850
BpmI CTGGAG 3 cut(s) 140, 592, 920
Bpu1102I GCTNAGC 1 cut(s) 370
BpuMI CCSGG 2 cut(s) 114, 224
BsaAI YACGTR 1 cut(s) 866
BsaBI GATNNNNATC 1 cut(s) 765
BsaI GGTCTC 1 cut(s) 80
BsaJI CCNNGG 7 cut(s) 78, 90, 102, 352, 1087, 1183, 1766
Bsc4I CCNNNNNNNGG 5 cut(s) 17, 107, 365, 734, 858
Bse1I ACTGG 5 cut(s) 157, 277, 629, 739, 1627
Bse8I GATNNNNATC 1 cut(s) 765
BseBI CCWGG 2 cut(s) 486, 529
BseDI CCNNGG 7 cut(s) 78, 90, 102, 352, 1087, 1183, 1766
BseGI GGATG 5 cut(s) 523, 1421, 1663, 1818, 1822
BseJI GATNNNNATC 1 cut(s) 765
BseLI CCNNNNNNNGG 5 cut(s) 17, 107, 365, 734, 858
BseMII CTCAG 2 cut(s) 26, 1751
BseNI ACTGG 5 cut(s) 157, 277, 629, 739, 1627
BseRI GAGGAG 4 cut(s) 36, 107, 110, 1346
BseSI GKGCMC 1 cut(s) 629
BseX3I CGGCCG 1 cut(s) 75
BseXI GCAGC 4 cut(s) 1210, 1213, 1241, 1387
BsgI GTGCAG 1 cut(s) 1844
Bsh1236I CGCG 1 cut(s) 135
Bsh1285I CGRYCG 2 cut(s) 78, 856
BshFI GGCC 7 cut(s) 77, 117, 151, 627, 926, 1690, 1864
BsiEI CGRYCG 2 cut(s) 78, 856
BsiHKAI GWGCWC 2 cut(s) 74, 168
BsiHKCI CYCGRG 2 cut(s) 67, 917
BsiSI CCGG 2 cut(s) 114, 223
BslFI GGGAC 6 cut(s) 96, 239, 331, 563, 1656, 1883
BslI CCNNNNNNNGG 5 cut(s) 17, 107, 365, 734, 858
BsmAI GTCTC 2 cut(s) 80, 725
BsmFI GGGAC 6 cut(s) 96, 239, 331, 563, 1656, 1883
BsmI GAATGC 1 cut(s) 1045
BsnI GGCC 7 cut(s) 77, 117, 151, 627, 926, 1690, 1864
Bso31I GGTCTC 1 cut(s) 80
BsoBI CYCGRG 2 cut(s) 67, 917
Bsp120I GGGCCC 1 cut(s) 625
Bsp1286I GDGCHC 4 cut(s) 74, 102, 168, 629
Bsp1407I TGTACA 2 cut(s) 401, 562
Bsp143I GATC 7 cut(s) 581, 679, 853, 931, 1264, 1603, 1733
Bsp1720I GCTNAGC 1 cut(s) 370
Bsp19I CCATGG 1 cut(s) 102
BspACI CCGC 4 cut(s) 148, 192, 257, 1715
BspANI GGCC 7 cut(s) 77, 117, 151, 627, 926, 1690, 1864
BspCNI CTCAG 2 cut(s) 25, 1750
BspFNI CGCG 1 cut(s) 135
BspHI TCATGA 2 cut(s) 462, 1587
BspLI GGNNCC 8 cut(s) 9, 99, 111, 112, 347, 627, 1335, 1865
BspMAI CTGCAG 1 cut(s) 1231
BspMI ACCTGC 1 cut(s) 1390
BspPI GGATC 3 cut(s) 1259, 1598, 1741
BspQI GCTCTTC 1 cut(s) 189
BspTI CTTAAG 1 cut(s) 719
BspTNI GGTCTC 1 cut(s) 80
BsrBI CCGCTC 1 cut(s) 194
BsrGI TGTACA 2 cut(s) 401, 562
BsrI ACTGG 5 cut(s) 157, 277, 629, 739, 1627
BssECI CCNNGG 7 cut(s) 78, 90, 102, 352, 1087, 1183, 1766
BssMI GATC 7 cut(s) 581, 679, 853, 931, 1264, 1603, 1733
BssT1I CCWWGG 5 cut(s) 102, 352, 1087, 1183, 1766
Bst2UI CCWGG 2 cut(s) 486, 529
Bst4CI ACNGT 8 cut(s) 667, 799, 1488, 1513, 1699, 1756, 1789, 1897
Bst6I CTCTTC 3 cut(s) 189, 1351, 1440
BstAFI CTTAAG 1 cut(s) 719
BstAUI TGTACA 2 cut(s) 401, 562
BstBAI YACGTR 1 cut(s) 866
BstC8I GCNNGC 3 cut(s) 168, 534, 1827
BstDEI CTNAG 4 cut(s) 12, 370, 1350, 1737
BstDSI CCRYGG 2 cut(s) 78, 102
BstF5I GGATG 5 cut(s) 523, 1421, 1663, 1818, 1822
BstFNI CGCG 1 cut(s) 135
BstHHI GCGC 1 cut(s) 137
BstKTI GATC 7 cut(s) 584, 682, 856, 934, 1267, 1606, 1736
BstMAI GTCTC 2 cut(s) 80, 725
BstMBI GATC 7 cut(s) 581, 679, 853, 931, 1264, 1603, 1733
BstMCI CGRYCG 2 cut(s) 78, 856
BstMWI GCNNNNNNNGC 4 cut(s) 69, 533, 1229, 1542
BstNI CCWGG 2 cut(s) 486, 529
BstNSI RCATGY 1 cut(s) 242
BstSCI CCNGG 4 cut(s) 112, 222, 484, 527
BstSFI CTRYAG 2 cut(s) 1227, 1830
BstSLI GKGCMC 1 cut(s) 629
BstUI CGCG 1 cut(s) 135
BstV1I GCAGC 4 cut(s) 1210, 1213, 1241, 1387
BstV2I GAAGAC 1 cut(s) 1850
BstX2I RGATCY 4 cut(s) 931, 1264, 1603, 1733
BstYI RGATCY 4 cut(s) 931, 1264, 1603, 1733
BstZI CGGCCG 1 cut(s) 75
BsuI GTATCC 2 cut(s) 855, 1500
BsuRI GGCC 7 cut(s) 77, 117, 151, 627, 926, 1690, 1864
BtgI CCRYGG 2 cut(s) 78, 102
BtrI CACGTC 1 cut(s) 1876
BtsCI GGATG 5 cut(s) 523, 1421, 1663, 1818, 1822
BtsI GCAGTG 1 cut(s) 1531
BtsIMutI CAGTG 6 cut(s) 547, 636, 672, 1531, 1695, 1761
BveI ACCTGC 1 cut(s) 1390
Cac8I GCNNGC 3 cut(s) 168, 534, 1827
CaiI CAGNNNCTG 2 cut(s) 734, 1025
CciI TCATGA 2 cut(s) 462, 1587
CfoI GCGC 1 cut(s) 137
Cfr13I GGNCC 8 cut(s) 110, 116, 345, 356, 625, 626, 925, 1863
Csp6I GTAC 8 cut(s) 202, 402, 563, 588, 617, 958, 1458, 1620
CspCI CAANNNNNGTGG 2 cut(s) 1494, 1529
CviAII CATG 6 cut(s) 103, 239, 413, 463, 1480, 1588
CviQI GTAC 8 cut(s) 202, 402, 563, 588, 617, 958, 1458, 1620
DdeI CTNAG 4 cut(s) 12, 370, 1350, 1737
DpnI GATC 7 cut(s) 583, 681, 855, 933, 1266, 1605, 1735
DpnII GATC 7 cut(s) 581, 679, 853, 931, 1264, 1603, 1733
EaeI YGGCCR 1 cut(s) 75
EagI CGGCCG 1 cut(s) 75
Eam1104I CTCTTC 3 cut(s) 189, 1351, 1440
EarI CTCTTC 3 cut(s) 189, 1351, 1440
EciI GGCGGA 1 cut(s) 272
Ecl136II GAGCTC 1 cut(s) 72
EclXI CGGCCG 1 cut(s) 75
Eco130I CCWWGG 5 cut(s) 102, 352, 1087, 1183, 1766
Eco147I AGGCCT 1 cut(s) 1690
Eco24I GRGCYC 3 cut(s) 74, 102, 629
Eco31I GGTCTC 1 cut(s) 80
Eco47I GGWCC 3 cut(s) 110, 345, 356
Eco52I CGGCCG 1 cut(s) 75
Eco53kI GAGCTC 1 cut(s) 72
Eco57I CTGAAG 1 cut(s) 1359
Eco88I CYCGRG 2 cut(s) 67, 917
EcoICRI GAGCTC 1 cut(s) 72
EcoO109I RGGNCCY 3 cut(s) 110, 345, 1863
EcoRI GAATTC 1 cut(s) 1131
EcoRII CCWGG 2 cut(s) 484, 527
EcoT14I CCWWGG 5 cut(s) 102, 352, 1087, 1183, 1766
EcoT38I GRGCYC 3 cut(s) 74, 102, 629
ErhI CCWWGG 5 cut(s) 102, 352, 1087, 1183, 1766
FaeI CATG 6 cut(s) 106, 242, 416, 466, 1483, 1591
FalI AAGNNNNNCTT 2 cut(s) 516, 548
FaqI GGGAC 6 cut(s) 96, 239, 331, 563, 1656, 1883
FatI CATG 6 cut(s) 102, 238, 412, 462, 1479, 1587
FauI CCCGC 1 cut(s) 1708
FauNDI CATATG 2 cut(s) 559, 1277
FbaI TGATCA 1 cut(s) 679
FblI GTMKAC 2 cut(s) 504, 1872
Fnu4HI GCNGC 5 cut(s) 149, 1224, 1227, 1230, 1401
FokI GGATG 5 cut(s) 530, 1408, 1670, 1825, 1829
FriOI GRGCYC 3 cut(s) 74, 102, 629
Fsp4HI GCNGC 5 cut(s) 149, 1224, 1227, 1230, 1401
GlaI GCGC 1 cut(s) 136
GluI GCNGC 5 cut(s) 149, 1224, 1227, 1230, 1401
GsuI CTGGAG 3 cut(s) 140, 592, 920
HaeIII GGCC 7 cut(s) 77, 117, 151, 627, 926, 1690, 1864
HapII CCGG 2 cut(s) 114, 223
HhaI GCGC 1 cut(s) 137
Hin1II CATG 6 cut(s) 106, 242, 416, 466, 1483, 1591
Hin6I GCGC 1 cut(s) 135
HinP1I GCGC 1 cut(s) 135
HincII GTYRAC 1 cut(s) 445
HindII GTYRAC 1 cut(s) 445
HinfI GANTC 8 cut(s) 50, 466, 551, 706, 911, 1022, 1302, 1572
HpaII CCGG 2 cut(s) 114, 223
HphI GGTGA 4 cut(s) 751, 1199, 1481, 1741
Hpy166II GTNNAC 5 cut(s) 445, 505, 565, 1676, 1873
Hpy188I TCNGA 6 cut(s) 15, 749, 1139, 1320, 1408, 1887
Hpy8I GTNNAC 5 cut(s) 445, 505, 565, 1676, 1873
Hpy99I CGWCG 2 cut(s) 256, 900
HpyAV CCTTC 1 cut(s) 359
HpyCH4III ACNGT 8 cut(s) 667, 799, 1488, 1513, 1699, 1756, 1789, 1897
HpyCH4IV ACGT 4 cut(s) 228, 438, 865, 1875
HpyF10VI GCNNNNNNNGC 4 cut(s) 69, 533, 1229, 1542
HpyF3I CTNAG 4 cut(s) 12, 370, 1350, 1737
HpySE526I ACGT 4 cut(s) 228, 438, 865, 1875
Hsp92II CATG 6 cut(s) 106, 242, 416, 466, 1483, 1591
HspAI GCGC 1 cut(s) 135
KflI GGGWCCC 1 cut(s) 110
Ksp22I TGATCA 1 cut(s) 679
Kzo9I GATC 7 cut(s) 581, 679, 853, 931, 1264, 1603, 1733
LguI GCTCTTC 1 cut(s) 189
LmnI GCTCC 2 cut(s) 97, 1333
Lsp1109I GCAGC 4 cut(s) 1210, 1213, 1241, 1387
LweI GCATC 4 cut(s) 169, 565, 1333, 1412
MaeII ACGT 4 cut(s) 228, 438, 865, 1875
MaeIII GTNAC 6 cut(s) 232, 268, 542, 1187, 1469, 1891
MalI GATC 7 cut(s) 583, 681, 855, 933, 1266, 1605, 1735
MbiI CCGCTC 1 cut(s) 194
MboI GATC 7 cut(s) 581, 679, 853, 931, 1264, 1603, 1733
MboII GAAGA 9 cut(s) 176, 316, 439, 795, 999, 1352, 1368, 1427, 1855
MfeI CAATTG 1 cut(s) 360
MflI RGATCY 4 cut(s) 931, 1264, 1603, 1733
MhlI GDGCHC 4 cut(s) 74, 102, 168, 629
MlyI GAGTC 3 cut(s) 545, 700, 1581
MseI TTAA 3 cut(s) 720, 1239, 1909
MslI CAYNNNNRTG 2 cut(s) 1478, 1754
MspA1I CMGCKG 2 cut(s) 677, 964
MspCI CTTAAG 1 cut(s) 719
MspI CCGG 2 cut(s) 114, 223
MspR9I CCNGG 4 cut(s) 114, 224, 486, 529
MunI CAATTG 1 cut(s) 360
Mva1269I GAATGC 1 cut(s) 1045
MvaI CCWGG 2 cut(s) 486, 529
MvnI CGCG 1 cut(s) 135
MwoI GCNNNNNNNGC 4 cut(s) 69, 533, 1229, 1542
NciI CCSGG 2 cut(s) 114, 224
NcoI CCATGG 1 cut(s) 102
NdeI CATATG 2 cut(s) 559, 1277
NdeII GATC 7 cut(s) 581, 679, 853, 931, 1264, 1603, 1733
NlaIII CATG 6 cut(s) 106, 242, 416, 466, 1483, 1591
NlaIV GGNNCC 8 cut(s) 9, 99, 111, 112, 347, 627, 1335, 1865
NmeAIII GCCGAG 1 cut(s) 53
NmuCI GTSAC 3 cut(s) 542, 1187, 1469
NspI RCATGY 1 cut(s) 242
OliI CACNNNNGTG 1 cut(s) 1754
PaeR7I CTCGAG 2 cut(s) 67, 917
PagI TCATGA 2 cut(s) 462, 1587
PaqCI CACCTGC 1 cut(s) 1390
PceI AGGCCT 1 cut(s) 1690
PciSI GCTCTTC 1 cut(s) 189
PcsI WCGNNNNNNNCGW 2 cut(s) 174, 862
PctI GAATGC 1 cut(s) 1045
PfeI GAWTC 5 cut(s) 50, 466, 911, 1022, 1302
PflFI GACNNNGTC 1 cut(s) 440
PflMI CCANNNNNTGG 1 cut(s) 734
PkrI GCNGC 5 cut(s) 150, 1225, 1228, 1231, 1402
Ple19I CGATCG 1 cut(s) 856
PleI GAGTC 3 cut(s) 545, 700, 1580
PpsI GAGTC 3 cut(s) 545, 700, 1580
Ppu21I YACGTR 1 cut(s) 866
PpuMI RGGWCCY 2 cut(s) 110, 345
Psp124BI GAGCTC 1 cut(s) 74
Psp5II RGGWCCY 2 cut(s) 110, 345
Psp6I CCWGG 2 cut(s) 484, 527
PspGI CCWGG 2 cut(s) 484, 527
PspN4I GGNNCC 8 cut(s) 9, 99, 111, 112, 347, 627, 1335, 1865
PspOMI GGGCCC 1 cut(s) 625
PspPI GGNCC 8 cut(s) 110, 116, 345, 356, 625, 626, 925, 1863
PspPPI RGGWCCY 2 cut(s) 110, 345
PspXI VCTCGAGB 1 cut(s) 67
PstI CTGCAG 1 cut(s) 1231
PstNI CAGNNNCTG 2 cut(s) 734, 1025
PsuI RGATCY 4 cut(s) 931, 1264, 1603, 1733
PsyI GACNNNGTC 1 cut(s) 440
PvuI CGATCG 1 cut(s) 856
PvuII CAGCTG 2 cut(s) 677, 964
RsaI GTAC 8 cut(s) 203, 403, 564, 589, 618, 959, 1459, 1621
RsaNI GTAC 8 cut(s) 202, 402, 563, 588, 617, 958, 1458, 1620
RseI CAYNNNNRTG 2 cut(s) 1478, 1754
SacI GAGCTC 1 cut(s) 74
SapI GCTCTTC 1 cut(s) 189
SaqAI TTAA 3 cut(s) 720, 1239, 1909
SatI GCNGC 5 cut(s) 149, 1224, 1227, 1230, 1401
Sau3AI GATC 7 cut(s) 581, 679, 853, 931, 1264, 1603, 1733
Sau96I GGNCC 8 cut(s) 110, 116, 345, 356, 625, 626, 925, 1863
SchI GAGTC 3 cut(s) 545, 700, 1581
ScrFI CCNGG 4 cut(s) 114, 224, 486, 529
SduI GDGCHC 4 cut(s) 74, 102, 168, 629
SfaNI GCATC 4 cut(s) 169, 565, 1333, 1412
SfcI CTRYAG 2 cut(s) 1227, 1830
Sfr274I CTCGAG 2 cut(s) 67, 917
SinI GGWCC 3 cut(s) 110, 345, 356
SlaI CTCGAG 2 cut(s) 67, 917
SmiMI CAYNNNNRTG 2 cut(s) 1478, 1754
SmlI CTYRAG 3 cut(s) 67, 719, 917
SmoI CTYRAG 3 cut(s) 67, 719, 917
SseBI AGGCCT 1 cut(s) 1690
SsiI CCGC 4 cut(s) 148, 192, 257, 1715
SstI GAGCTC 1 cut(s) 74
StuI AGGCCT 1 cut(s) 1690
StyD4I CCNGG 4 cut(s) 112, 222, 484, 527
StyI CCWWGG 5 cut(s) 102, 352, 1087, 1183, 1766
TaaI ACNGT 8 cut(s) 667, 799, 1488, 1513, 1699, 1756, 1789, 1897
TaiI ACGT 4 cut(s) 231, 441, 868, 1878
TaqII GACCGA 1 cut(s) 104
TatI WGTACW 2 cut(s) 401, 562
TauI GCSGC 1 cut(s) 151
TfiI GAWTC 5 cut(s) 50, 466, 911, 1022, 1302
Tru1I TTAA 3 cut(s) 720, 1239, 1909
Tru9I TTAA 3 cut(s) 720, 1239, 1909
TscAI CASTG 6 cut(s) 547, 636, 672, 1538, 1702, 1761
TseFI GTSAC 3 cut(s) 542, 1187, 1469
TseI GCWGC 4 cut(s) 1223, 1226, 1229, 1400
Tsp45I GTSAC 3 cut(s) 542, 1187, 1469
TspGWI ACGGA 1 cut(s) 33
TspRI CASTG 6 cut(s) 547, 636, 672, 1538, 1702, 1761
Tth111I GACNNNGTC 1 cut(s) 440
Van91I CCANNNNNTGG 1 cut(s) 734
Vha464I CTTAAG 1 cut(s) 719
VpaK11BI GGWCC 3 cut(s) 110, 345, 356
XapI RAATTY 6 cut(s) 326, 743, 1105, 1131, 1661, 1881
XceI RCATGY 1 cut(s) 242
XhoI CTCGAG 2 cut(s) 67, 917
XmiI GTMKAC 2 cut(s) 504, 1872
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.