AT3G45750

RNA uridylyltransferase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0006587
Physical Location & Seq
Reverse (-)
16793515 .. 16798000
4486 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G45750.3

Sequence Viewer

Length: 2049 bp
ATGGGCTCTCGAGGAAATGTGGCTGAGGATAAAAATGTTTCGAGTAAAGTGATTCGAAAGAAGGTGAACAACACTGTGTCAATAGCACTCAAGAGATATAAGATTGATAGTTATATCTTACTGGATCTTGATAAGGTATTAAATGATGTCTACTGCTCTTTTCGACCGGTTTCTGCTGATTACAATACTAGGAAGGAATTGGTCAAAAACCTTAATACTATGGCTTTAGATATTTATGGTAAGTCTGAAGAGAGCAGCCCGGTCCTTGAGGCGTATGGGTCTTTTGTGATGGATATGTATTCATCTCAGAGTGATTTAGATGTGTCTATTAACTTTGGTAATGGAACATCTGAGATTCCTCGTGAAAAGAAGCTCGAGATACTTAAAAGATTTGCTAAGAAGCTCCGTTCTCTGCAGGGAGAAGGGCAGGTTAAGAATGTTGAATCTATCTTCTCTGCTAAAGTGCCAATTGTCAAATTCTCTGATCAAGGGACTGGTGTTGAGTGTGATTTGTCAGTCGAAAATAAAGATGGCATTTTAAATTCACAGATCGTTCGCATCATATCTCAAATTGATGGCAGGTTTCAAAAACTTTGTCTGTTGGTTAAGCATTGGGCCAAAGCTCATGAAGTTAACAGTGCGCTACACCGAACCCTGAATTCTGTATCTATAACATTGCTAGTCGCTCTTCACTTACAGACTCAAAATCCTCCCATTTTACCTCCATTCTCTATGCTATTGAAAGATGGAATGGATCCTCCTAACGTGGAGAAAAGGGCACAAAAGTTCTTAAACTGGGGACAGCGTAATCAGGAATCTCTGGGTAGACTGTTTGCAACCTTTTTTATTAAGTTACAATCTGTAGAATTCCTTTGGAGACAAGGGCTCTGCGTCAGTGTGCTGAATGGTCTTTGGATATCTAAAAAGTGGAAAAAAGTTGGCGTTGGATCCATTAGTGTTGAGGATTTTACCAACATATCTCAAAATGTCGCAAGACGGGTTAATGGTGCAGGAGCCAAAAAGATATACAGCTCCATAAACAGAACCGTTGAAGACATCTTTGAATTCCTCAATGACAAGGTTGCTGGAACAGATCTCAGACATAGGTTGTTTGGCAAAGGATCTGTTGTGCAGATTCCTCCTGTGGCGCCACTTAATGGAAAGACCGCTGGAATACACAAGGTGTCTGGCCAACAAGCTGTGGTGCAGCCTTCTCCTCCTGTGCCGCGACTCAATGGCAAAATTGCTGGAACACATCGCAAACAGAAGGTGTTTGCGCAACAAGCAGTTGTGGAGCCTCGTCCTCCTGTGCTGCCACTTAATGGCAATATCGCTGGCACACATTTCAGACATGAGTCGTTTCGCCAACAAGCTGTGTTGCAGCCTCTTCCTCCTCTGCGGCCAGTCAATGGAAGTATTGGTGGAACTCATTTCAGAGATAGGTTGTTTGACCAACAAGTACTTGTGGAGCCTCGTCCTCTTCTGCCGCCATTCAGTGGCAGTATCGCTGAAACGCATTTCAGACATAGGTCGTTTCCCCAAGAAGCAGTTCTGGACCCTCGTCCTTCTGTGCAGTCGCGCAACGTTTACTCACAACAACTTCACAATAACTACAGAAACGGTTTCAGCGGTCCTCCTGAAGAACATCACACCAAAAGACTTTGTTTGGGAAACCGCTACAGAGCTCTAGAAGAAACGGGTAACTGGAGAGAGGAAGAGAGATACGAAGATCCCAGAGGAAAACGAAACAGGTATGTCGGAAACTTTAATGGGTTAGAAGAGTTTCGTGAAATCCCCCGGTTTGGAATTCATAGTAACCCTTTAGATGATCCTTATAGACAAGTCCCTTTGAATGCTGGAACAAATGGTCATTTGGTTCACCATAGGCATGATGGTAGATATAATGGTGAAGAACCAATGCATGTGGGACAATGGCAAGACTACACTCGTAGAGTTGGTTCGCCACCACTACAACAAACCCCACCACCTTATGATAGAGTTAGTTATGAAGATTTTCGTCCTCATTTAGGTAGATCGTTTTACCATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NTP_transf_2

Protein Analysis

682

Amino Acids

77.23

Weight (kDa)

9.69

Isoelectric Point (pI)

43.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MTPAP-like_central PF22600 14 - 115 1.7e-26 Poly(A) RNA polymerase, mitochondrial-like, central palm domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1278
Acc36I ACCTGC 2 cut(s) 418, 570
AccB1I GGYRCC 1 cut(s) 1147
AccB7I CCANNNNNTGG 4 cut(s) 1157, 1322, 1409, 1496
AccI GTMKAC 2 cut(s) 150, 826
AccII CGCG 2 cut(s) 1228, 1579
AciI CCGC 6 cut(s) 1167, 1226, 1399, 1487, 1629, 1675
AclI AACGTT 1 cut(s) 1584
AclWI GGATC 8 cut(s) 132, 749, 762, 942, 955, 1129, 1724, 1823
AcoI YGGCCR 2 cut(s) 1189, 1400
AcsI RAATTY 6 cut(s) 476, 541, 658, 866, 1064, 1806
AcuI CTGAAG 2 cut(s) 267, 1659
AcyI GRCGYC 1 cut(s) 1148
AdeI CACNNNGTG 1 cut(s) 1183
AfaI GTAC 1 cut(s) 1461
AfiI CCNNNNNNNGG 6 cut(s) 1157, 1322, 1409, 1496, 1802, 2027
AgeI ACCGGT 1 cut(s) 166
AgsI TTSAA 6 cut(s) 443, 587, 742, 1052, 1064, 1852
AjuI GAANNNNNNNTTGG 2 cut(s) 1533, 1565
AluBI AGCT 7 cut(s) 373, 403, 623, 1032, 1199, 1373, 1685
AluI AGCT 7 cut(s) 373, 403, 623, 1032, 1199, 1373, 1685
Alw21I GWGCWC 1 cut(s) 1687
Alw26I GTCTC 1 cut(s) 871
AlwI GGATC 8 cut(s) 132, 749, 762, 942, 955, 1129, 1724, 1823
Ama87I CYCGRG 2 cut(s) 9, 374
AoxI GGCC 3 cut(s) 615, 1189, 1400
ApeKI GCWGC 4 cut(s) 255, 1207, 1312, 1381
ApoI RAATTY 6 cut(s) 476, 541, 658, 866, 1064, 1806
ArsI GACNNNNNNTTYG 2 cut(s) 580, 612
AsiGI ACCGGT 1 cut(s) 166
Asp700I GAANNNNTTC 3 cut(s) 1548, 1782, 2013
AspLEI GCGC 4 cut(s) 643, 1150, 1279, 1581
AspS9I GGNCC 4 cut(s) 262, 615, 1555, 1631
AsuC2I CCSGG 2 cut(s) 260, 1798
AsuHPI GGTGA 3 cut(s) 76, 1871, 1919
AsuII TTCGAA 1 cut(s) 55
AvaI CYCGRG 2 cut(s) 9, 374
AvaII GGWCC 3 cut(s) 262, 1555, 1631
BaeGI GKGCMC 1 cut(s) 781
BalI TGGCCA 1 cut(s) 1191
BamHI GGATCC 2 cut(s) 754, 947
BanI GGYRCC 1 cut(s) 1147
BanII GRGCYC 3 cut(s) 8, 888, 1687
BauI CACGAG 1 cut(s) 360
BbsI GAAGAC 1 cut(s) 1059
Bbv12I GWGCWC 1 cut(s) 1687
BbvCI CCTCAGC 1 cut(s) 24
BbvI GCAGC 4 cut(s) 267, 1219, 1299, 1393
BccI CCATC 5 cut(s) 283, 524, 569, 740, 1886
BclI TGATCA 1 cut(s) 484
BcnI CCSGG 2 cut(s) 260, 1798
BcoDI GTCTC 1 cut(s) 871
BfaI CTAG 3 cut(s) 189, 680, 1688
BfmI CTRYAG 4 cut(s) 413, 861, 1612, 1678
BfoI RGCGCY 1 cut(s) 1151
BfuAI ACCTGC 2 cut(s) 418, 570
BglII AGATCT 1 cut(s) 1093
BisI GCNGC 7 cut(s) 256, 1208, 1226, 1313, 1382, 1400, 1487
BlsI GCNGC 7 cut(s) 257, 1209, 1227, 1314, 1383, 1401, 1488
BmcAI AGTACT 1 cut(s) 1461
Bme1390I CCNGG 2 cut(s) 260, 1798
Bme18I GGWCC 3 cut(s) 262, 1555, 1631
BmeT110I CYCGRG 2 cut(s) 9, 374
BmgT120I GGNCC 4 cut(s) 262, 615, 1555, 1631
BmiI GGNNCC 7 cut(s) 756, 949, 1015, 1149, 1296, 1470, 1557
BmrFI CCNGG 2 cut(s) 260, 1798
BmrI ACTGGG 1 cut(s) 805
BmsI GCATC 1 cut(s) 567
BmuI ACTGGG 1 cut(s) 805
BoxI GACNNNNGTC 3 cut(s) 1354, 1528, 1560
BpiI GAAGAC 1 cut(s) 1059
BpmI CTGGAG 1 cut(s) 1726
Bpu10I CCTNAGC 1 cut(s) 24
Bpu14I TTCGAA 1 cut(s) 55
BpuEI CTTGAG 2 cut(s) 74, 287
BpuMI CCSGG 2 cut(s) 260, 1798
BsaHI GRCGYC 1 cut(s) 1148
BsaJI CCNNGG 1 cut(s) 1796
BsaWI WCCGGW 1 cut(s) 166
Bsc4I CCNNNNNNNGG 6 cut(s) 1157, 1322, 1409, 1496, 1802, 2027
Bse118I RCCGGY 1 cut(s) 166
Bse1I ACTGG 5 cut(s) 126, 499, 800, 1403, 1709
Bse3DI GCAATG 1 cut(s) 674
BseDI CCNNGG 1 cut(s) 1796
BseLI CCNNNNNNNGG 6 cut(s) 1157, 1322, 1409, 1496, 1802, 2027
BseMI GCAATG 1 cut(s) 674
BseMII CTCAG 4 cut(s) 15, 320, 342, 1111
BseNI ACTGG 5 cut(s) 126, 499, 800, 1403, 1709
BseRI GAGGAG 2 cut(s) 1206, 1383
BseSI GKGCMC 1 cut(s) 781
BseXI GCAGC 4 cut(s) 267, 1219, 1299, 1393
BsgI GTGCAG 4 cut(s) 1029, 1151, 1226, 1592
Bsh1236I CGCG 2 cut(s) 1228, 1579
Bsh1285I CGRYCG 1 cut(s) 167
BshFI GGCC 3 cut(s) 617, 1191, 1402
BshNI GGYRCC 1 cut(s) 1147
BshTI ACCGGT 1 cut(s) 166
BsiEI CGRYCG 1 cut(s) 167
BsiHKAI GWGCWC 1 cut(s) 1687
BsiHKCI CYCGRG 2 cut(s) 9, 374
BsiSI CCGG 3 cut(s) 167, 260, 1798
BslFI GGGAC 4 cut(s) 505, 813, 1829, 1941
BslI CCNNNNNNNGG 6 cut(s) 1157, 1322, 1409, 1496, 1802, 2027
BsmAI GTCTC 1 cut(s) 871
BsmFI GGGAC 4 cut(s) 505, 813, 1829, 1941
BsmI GAATGC 1 cut(s) 1858
BsnI GGCC 3 cut(s) 617, 1191, 1402
BsoBI CYCGRG 2 cut(s) 9, 374
Bsp119I TTCGAA 1 cut(s) 55
Bsp1286I GDGCHC 4 cut(s) 8, 781, 888, 1687
BspACI CCGC 6 cut(s) 1167, 1226, 1399, 1487, 1629, 1675
BspANI GGCC 3 cut(s) 617, 1191, 1402
BspCNI CTCAG 4 cut(s) 16, 319, 343, 1110
BspFNI CGCG 2 cut(s) 1228, 1579
BspHI TCATGA 1 cut(s) 625
BspLI GGNNCC 7 cut(s) 756, 949, 1015, 1149, 1296, 1470, 1557
BspMAI CTGCAG 1 cut(s) 417
BspMI ACCTGC 2 cut(s) 418, 570
BspPI GGATC 8 cut(s) 132, 749, 762, 942, 955, 1129, 1724, 1823
BspQI GCTCTTC 1 cut(s) 693
BspT104I TTCGAA 1 cut(s) 55
BspT107I GGYRCC 1 cut(s) 1147
BsrDI GCAATG 1 cut(s) 674
BsrFI RCCGGY 1 cut(s) 166
BsrI ACTGG 5 cut(s) 126, 499, 800, 1403, 1709
BssAI RCCGGY 1 cut(s) 166
BssECI CCNNGG 1 cut(s) 1796
BssNI GRCGYC 1 cut(s) 1148
BssSI CACGAG 1 cut(s) 360
Bst2BI CACGAG 1 cut(s) 360
Bst4CI ACNGT 5 cut(s) 76, 638, 831, 1048, 1622
Bst6I CTCTTC 6 cut(s) 243, 693, 1392, 1485, 1710, 1773
BstACI GRCGYC 1 cut(s) 1148
BstBI TTCGAA 1 cut(s) 55
BstC8I GCNNGC 1 cut(s) 1336
BstDEI CTNAG 5 cut(s) 24, 306, 351, 396, 1097
BstENI CCTNNNNNAGG 1 cut(s) 2025
BstFNI CGCG 2 cut(s) 1228, 1579
BstH2I RGCGCY 1 cut(s) 1151
BstHHI GCGC 4 cut(s) 643, 1150, 1279, 1581
BstMAI GTCTC 1 cut(s) 871
BstMCI CGRYCG 1 cut(s) 167
BstMWI GCNNNNNNNGC 1 cut(s) 1283
BstNSI RCATGY 1 cut(s) 1925
BstPAI GACNNNNGTC 3 cut(s) 1354, 1528, 1560
BstSCI CCNGG 2 cut(s) 258, 1796
BstSFI CTRYAG 4 cut(s) 413, 861, 1612, 1678
BstSLI GKGCMC 1 cut(s) 781
BstUI CGCG 2 cut(s) 1228, 1579
BstV1I GCAGC 4 cut(s) 267, 1219, 1299, 1393
BstV2I GAAGAC 1 cut(s) 1059
BstX2I RGATCY 6 cut(s) 124, 754, 947, 1093, 1121, 1729
BstYI RGATCY 6 cut(s) 124, 754, 947, 1093, 1121, 1729
BsuRI GGCC 3 cut(s) 617, 1191, 1402
BtgZI GCGATG 1 cut(s) 1241
BtsIMutI CAGTG 4 cut(s) 72, 643, 901, 1501
BveI ACCTGC 2 cut(s) 418, 570
Cac8I GCNNGC 1 cut(s) 1336
CciI TCATGA 1 cut(s) 625
CfoI GCGC 4 cut(s) 643, 1150, 1279, 1581
Cfr10I RCCGGY 1 cut(s) 166
Cfr13I GGNCC 4 cut(s) 262, 615, 1555, 1631
CseI GACGC 1 cut(s) 880
Csp6I GTAC 1 cut(s) 1460
CspAI ACCGGT 1 cut(s) 166
CspCI CAANNNNNGTGG 2 cut(s) 1905, 1940
CviAII CATG 4 cut(s) 626, 1352, 1889, 1922
CviQI GTAC 1 cut(s) 1460
DdeI CTNAG 5 cut(s) 24, 306, 351, 396, 1097
DinI GGCGCC 1 cut(s) 1149
DraI TTTAAA 1 cut(s) 540
DraIII CACNNNGTG 1 cut(s) 1183
EaeI YGGCCR 2 cut(s) 1189, 1400
Eam1104I CTCTTC 6 cut(s) 243, 693, 1392, 1485, 1710, 1773
EarI CTCTTC 6 cut(s) 243, 693, 1392, 1485, 1710, 1773
Ecl136II GAGCTC 1 cut(s) 1685
Eco24I GRGCYC 3 cut(s) 8, 888, 1687
Eco32I GATATC 1 cut(s) 918
Eco47I GGWCC 3 cut(s) 262, 1555, 1631
Eco53kI GAGCTC 1 cut(s) 1685
Eco57I CTGAAG 2 cut(s) 267, 1659
Eco88I CYCGRG 2 cut(s) 9, 374
EcoICRI GAGCTC 1 cut(s) 1685
EcoNI CCTNNNNNAGG 1 cut(s) 2025
EcoRI GAATTC 4 cut(s) 658, 866, 1064, 1806
EcoRV GATATC 1 cut(s) 918
EcoT22I ATGCAT 1 cut(s) 1923
EcoT38I GRGCYC 3 cut(s) 8, 888, 1687
EgeI GGCGCC 1 cut(s) 1149
EheI GGCGCC 1 cut(s) 1149
FaeI CATG 4 cut(s) 629, 1355, 1892, 1925
FaqI GGGAC 4 cut(s) 505, 813, 1829, 1941
FatI CATG 4 cut(s) 625, 1351, 1888, 1921
FbaI TGATCA 1 cut(s) 484
FblI GTMKAC 2 cut(s) 150, 826
Fnu4HI GCNGC 7 cut(s) 256, 1208, 1226, 1313, 1382, 1400, 1487
FriOI GRGCYC 3 cut(s) 8, 888, 1687
Fsp4HI GCNGC 7 cut(s) 256, 1208, 1226, 1313, 1382, 1400, 1487
FspBI CTAG 3 cut(s) 189, 680, 1688
FspI TGCGCA 1 cut(s) 1278
GlaI GCGC 4 cut(s) 642, 1149, 1278, 1580
GluI GCNGC 7 cut(s) 256, 1208, 1226, 1313, 1382, 1400, 1487
GsuI CTGGAG 1 cut(s) 1726
HaeII RGCGCY 1 cut(s) 1151
HaeIII GGCC 3 cut(s) 617, 1191, 1402
HapII CCGG 3 cut(s) 167, 260, 1798
HgaI GACGC 1 cut(s) 880
HhaI GCGC 4 cut(s) 643, 1150, 1279, 1581
Hin1I GRCGYC 1 cut(s) 1148
Hin1II CATG 4 cut(s) 629, 1355, 1892, 1925
Hin6I GCGC 4 cut(s) 641, 1148, 1277, 1579
HinP1I GCGC 4 cut(s) 641, 1148, 1277, 1579
HincII GTYRAC 1 cut(s) 634
HindII GTYRAC 1 cut(s) 634
HinfI GANTC 8 cut(s) 52, 355, 443, 700, 815, 1135, 1230, 1355
HpaI GTTAAC 1 cut(s) 634
HpaII CCGG 3 cut(s) 167, 260, 1798
HphI GGTGA 3 cut(s) 76, 1871, 1919
Hpy166II GTNNAC 6 cut(s) 67, 151, 634, 827, 1588, 1879
Hpy188I TCNGA 9 cut(s) 247, 309, 352, 484, 1100, 1349, 1436, 1523, 1760
Hpy8I GTNNAC 6 cut(s) 67, 151, 634, 827, 1588, 1879
HpyAV CCTTC 6 cut(s) 55, 187, 416, 1221, 1261, 1575
HpyCH4III ACNGT 5 cut(s) 76, 638, 831, 1048, 1622
HpyCH4IV ACGT 2 cut(s) 765, 1584
HpyCH4V TGCA 8 cut(s) 415, 836, 1010, 1132, 1207, 1381, 1573, 1921
HpyF10VI GCNNNNNNNGC 1 cut(s) 1283
HpyF3I CTNAG 5 cut(s) 24, 306, 351, 396, 1097
HpySE526I ACGT 2 cut(s) 765, 1584
Hsp92I GRCGYC 1 cut(s) 1148
Hsp92II CATG 4 cut(s) 629, 1355, 1892, 1925
HspAI GCGC 4 cut(s) 641, 1148, 1277, 1579
KasI GGCGCC 1 cut(s) 1147
Ksp22I TGATCA 1 cut(s) 484
KspAI GTTAAC 1 cut(s) 634
LguI GCTCTTC 1 cut(s) 693
LmnI GCTCC 5 cut(s) 408, 1013, 1037, 1294, 1468
Lsp1109I GCAGC 4 cut(s) 267, 1219, 1299, 1393
LweI GCATC 1 cut(s) 567
MaeI CTAG 3 cut(s) 189, 680, 1688
MaeII ACGT 2 cut(s) 765, 1584
MaeIII GTNAC 3 cut(s) 852, 1700, 1814
MfeI CAATTG 1 cut(s) 468
MflI RGATCY 6 cut(s) 124, 754, 947, 1093, 1121, 1729
MhlI GDGCHC 4 cut(s) 8, 781, 888, 1687
MlsI TGGCCA 1 cut(s) 1191
MluNI TGGCCA 1 cut(s) 1191
Mly113I GGCGCC 1 cut(s) 1148
MlyI GAGTC 3 cut(s) 694, 1224, 1364
MmeI TCCRAC 2 cut(s) 925, 1738
Mox20I TGGCCA 1 cut(s) 1191
Mph1103I ATGCAT 1 cut(s) 1923
MroXI GAANNNNTTC 3 cut(s) 1548, 1782, 2013
MscI TGGCCA 1 cut(s) 1191
MslI CAYNNNNRTG 1 cut(s) 1887
Msp20I TGGCCA 1 cut(s) 1191
MspA1I CMGCKG 2 cut(s) 1169, 1629
MspI CCGG 3 cut(s) 167, 260, 1798
MspR9I CCNGG 2 cut(s) 260, 1798
MunI CAATTG 1 cut(s) 468
Mva1269I GAATGC 1 cut(s) 1858
MvnI CGCG 2 cut(s) 1228, 1579
MwoI GCNNNNNNNGC 1 cut(s) 1283
NarI GGCGCC 1 cut(s) 1148
NciI CCSGG 2 cut(s) 260, 1798
NlaIII CATG 4 cut(s) 629, 1355, 1892, 1925
NlaIV GGNNCC 7 cut(s) 756, 949, 1015, 1149, 1296, 1470, 1557
NsbI TGCGCA 1 cut(s) 1278
NsiI ATGCAT 1 cut(s) 1923
NspI RCATGY 1 cut(s) 1925
NspV TTCGAA 1 cut(s) 55
PaeR7I CTCGAG 2 cut(s) 9, 374
PagI TCATGA 1 cut(s) 625
PciSI GCTCTTC 1 cut(s) 693
PctI GAATGC 1 cut(s) 1858
PdmI GAANNNNTTC 3 cut(s) 1548, 1782, 2013
PfeI GAWTC 5 cut(s) 52, 355, 443, 815, 1135
PflMI CCANNNNNTGG 4 cut(s) 1157, 1322, 1409, 1496
PinAI ACCGGT 1 cut(s) 166
PkrI GCNGC 7 cut(s) 257, 1209, 1227, 1314, 1383, 1401, 1488
PleI GAGTC 3 cut(s) 694, 1224, 1363
PluTI GGCGCC 1 cut(s) 1151
PpsI GAGTC 3 cut(s) 694, 1224, 1363
PshAI GACNNNNGTC 3 cut(s) 1354, 1528, 1560
Psp124BI GAGCTC 1 cut(s) 1687
Psp1406I AACGTT 1 cut(s) 1584
PspN4I GGNNCC 7 cut(s) 756, 949, 1015, 1149, 1296, 1470, 1557
PspPI GGNCC 4 cut(s) 262, 615, 1555, 1631
PsrI GAACNNNNNNTAC 2 cut(s) 1942, 1974
PstI CTGCAG 1 cut(s) 417
PsuI RGATCY 6 cut(s) 124, 754, 947, 1093, 1121, 1729
RsaI GTAC 1 cut(s) 1461
RsaNI GTAC 1 cut(s) 1460
RseI CAYNNNNRTG 1 cut(s) 1887
SacI GAGCTC 1 cut(s) 1687
SapI GCTCTTC 1 cut(s) 693
SatI GCNGC 7 cut(s) 256, 1208, 1226, 1313, 1382, 1400, 1487
Sau96I GGNCC 4 cut(s) 262, 615, 1555, 1631
ScaI AGTACT 1 cut(s) 1461
SchI GAGTC 3 cut(s) 694, 1224, 1364
ScrFI CCNGG 2 cut(s) 260, 1798
SduI GDGCHC 4 cut(s) 8, 781, 888, 1687
SfaNI GCATC 1 cut(s) 567
SfcI CTRYAG 4 cut(s) 413, 861, 1612, 1678
SfoI GGCGCC 1 cut(s) 1149
Sfr274I CTCGAG 2 cut(s) 9, 374
SfuI TTCGAA 1 cut(s) 55
SinI GGWCC 3 cut(s) 262, 1555, 1631
SlaI CTCGAG 2 cut(s) 9, 374
SmiMI CAYNNNNRTG 1 cut(s) 1887
SmlI CTYRAG 4 cut(s) 9, 89, 266, 374
SmoI CTYRAG 4 cut(s) 9, 89, 266, 374
SsiI CCGC 6 cut(s) 1167, 1226, 1399, 1487, 1629, 1675
SspDI GGCGCC 1 cut(s) 1147
SspMI CTAG 3 cut(s) 189, 680, 1688
SstI GAGCTC 1 cut(s) 1687
StyD4I CCNGG 2 cut(s) 258, 1796
TaaI ACNGT 5 cut(s) 76, 638, 831, 1048, 1622
TaiI ACGT 2 cut(s) 768, 1587
TaqI TCGA 6 cut(s) 10, 41, 55, 163, 375, 519
TatI WGTACW 1 cut(s) 1459
TauI GCSGC 3 cut(s) 1228, 1402, 1489
TfiI GAWTC 5 cut(s) 52, 355, 443, 815, 1135
TscAI CASTG 4 cut(s) 79, 643, 901, 1501
TseI GCWGC 4 cut(s) 255, 1207, 1312, 1381
TspDTI ATGAA 4 cut(s) 291, 642, 1799, 2022
TspGWI ACGGA 1 cut(s) 395
TspRI CASTG 4 cut(s) 79, 643, 901, 1501
Van91I CCANNNNNTGG 4 cut(s) 1157, 1322, 1409, 1496
VpaK11BI GGWCC 3 cut(s) 262, 1555, 1631
XagI CCTNNNNNAGG 1 cut(s) 2025
XapI RAATTY 6 cut(s) 476, 541, 658, 866, 1064, 1806
XbaI TCTAGA 1 cut(s) 1687
XceI RCATGY 1 cut(s) 1925
XcmI CCANNNNNNNNNTGG 1 cut(s) 1889
XhoI CTCGAG 2 cut(s) 9, 374
XmiI GTMKAC 2 cut(s) 150, 826
XmnI GAANNNNTTC 3 cut(s) 1548, 1782, 2013
XspI CTAG 3 cut(s) 189, 680, 1688
ZrmI AGTACT 1 cut(s) 1461
Zsp2I ATGCAT 1 cut(s) 1923
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.