AT3G46920

PB1 domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0004627
Physical Location & Seq
Reverse (-)
17280430 .. 17285048
4619 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G46920.1

Sequence Viewer

Length: 3270 bp
ATGGATGATGAAGAATTGGAAAAGGTGAAGTTTTTATGTAGCTACAATGGAAAGATAATCCCTAGACCAAGTGATGGCATGTTACGTTACGTTGGTGGTCAAACAAGGATCGTTAGTGTTAAAAAGAATGTGAGATTTGATGAATTTGAGCAAAAGATGATTCAGGTTTATGGTCACCCTGTTGTTGTTAAGTATCAGCTTCCTGATGAGGATCTTGATGCTTTGGTTTCTGTTTCATCTAGTGAAGATATTGATAATATGATGGAGGAGTTTGAGAAGTTGGTAGAGAGATCTTCTGATGGGTCAGGGAAGTTGAGAGTTTTTTTGTTTGATGCTTCTTCGTCTGAGGTGGATGATTCTTTCGGAATATTGGAGTATGGTGATGGAGTTGATATTGGGCAGAGATATGTAGAGGCTGTGAATGGTGTTGTTGTGAGTAAGGAAAGTGTAGCTAGTGGTAGTTCTAATCCGAATTCTGATTTTAGTGGCGTGGATGTTGTTGATAGCTTGGGCGTTGGTCAGAGTGATTTTGTCGCAACTACTTGGACCTCGAGTAATTTTTCACCTCAGACTTATCATAGTAATGTATCAAGACTTGTTCCTCCTGATCCACGCTCTTCTGCTTATGTTGTGCCAATGACTGTCCACGCCGATCCGCCTCATTCTTTTCAGCTTGAGACTGTTTCAGAGAAACCAATAGTTGGTAAGATGCAGCAGCAACAACAGGGGTATACTACACCATCTGAACATCATCCACCGGCCTATGTTGAATCTCGCCAAGAAGCTTTAAGACAACCAGATATTGTTCATTCACCTATCCAGCTTTTGCCAAGTAGTACTTCTTTGTTCTCCCAACAACCTTTTCAAGATAGTCCTTTAAGTGTCTCATCCCACCAGTTCCTTCCTGCTGCTCACATGTCAATGGCTCCCTTGAATTCTCAGATTAGTTCCACACCAGTTTTGATTAACCCGGTAATGCAAACCCAAGAAAATCTGTTGGGGAACTATCATGCTGCTCAAAAGTTAGTACCGCTTCCTACAGAGCCAAGAAACACTGCATATCAAGGTACGATTTCTCCTGGTATACCATTTGATGGTTATGGCGGGTCTCAAGTTCCACCATCTAACCATGTTGTTCTCCCCGATGGAAGTTTCTATCAACAAGTAACTATGGCTGAAAGTTTTCAAAGGGTAAATGATTGTCATATGTGCCAGACATCTTTTCCTCATATGCATTCTGATCCGATTATGCGGGAGGGAAATGATGGTTCTACAATGTATGTGCCATATGTGAGCTCAGCTTTCTATGCTTCTCGTCCAGATGATATCATGAGAATCCAACAAACGGATAAGTTTACGGGTCAACAAAGCTTCCTCAATCATTCAAATCATCAAGAAAGAGATACTTTACATAACGCCAATCTTGCCACTGCTCAGGTCGAGACTACTGAACCTTTTGTCAATGAGATAGTAAGAGATGTTCCGATAAAAGTTCAAGTAACTAGGCAGCAGCAACATCCCGTAGACCCTTCAGTAGCATATGCACAATGCCGAGAACTAAGTGGATTGGTGGATAATGTTAACATACATGCTCCTGAAATATATAGCAATTGTCAGAATTTCATCTCACCAGTTGACAAAATTGGGAAAGAAGATATTATGGGTACCAGTTCTCAACAAATGGCAAGGAAGAATATGTTCTTACATGACACCTCTGGTCAGTCTCCAGTAAGTCCAAACATAGATCACACTGATTCAGCTAAGAGGCTAACAAGAGTAGTTCTTCCAGGCCATGAATCTCAGCCTAAGGAATCATGTGTGCCAACACAGTCTCCCTTATTAGGCAATCCTGGTTTGTATCTACAATCATTGGTTGGAGGTCAGCAGTTCGATTCAGCGGAAGCGCAGTCCAGCAATCCCGCTTATGACGTTGTTGAATCTACATTTGATGCTGCAAACTTACCATCATCCTTATCATCAAATCCTGATGCTGCTAATTTACCATCATCCTTGTCATCTAGTGTTGGTGGTGCAGACCACAAAGAATCATCAAAATCACTTTTTAGTAACCAGGACCCATGGAATTTGCAAACTAACTCAAACGAGGATGTCAAACCTGATCTACTTAATTCTTCGAAAGGCTCCGAGGAGGAGCACATCAAACAAGAACTTCAGAATGTTGCTGAAGGAGTCGCCGCTTCTGTGTTACAGTCAAGCACACCTTCATATCATGAACCTCCAATTAAGGTGGATGAGTATGCTTTTAATTCGAAAGGAGAAGTTTCACGTAATGATGAAATGAAACAGCAGTCTACACACTTCAAGGATATCAGGAACCAACTTCTAGAAAGACTGAATTTCGGATATTCTGGTTCTGATTCGCTGGATCAGTTGCAGATTATAAAGGACAGCGACCTTGAGGAATTGCGAGAACTAGGATCTGGCACATTTGGCACAGTTTATCATGGGAAATGGCGAGGCACTGATGTTGCAATCAAAAGGATCAATGATCGATGTTTTGCTGGCAAACCATCTGAGCAAGAACGAATGATCGATGACTTTTGGAATGAGGCACAGAACCTAGCTGGCTTGCACCATCCTAACGTCGTTGCTTTTTATGGGGTTGTGCTGGATTCACCTGGAGGTTCTGTGGCAACAGTTACAGAGTATATGGTCAATGGTTCTTTACGAAATGCGTTGCAGAAGAATGTTAGGAATTTTGATAGGTGCAAGCGTCAACTGATCGCTATGGACATTGCTTTTGGGATGGAGTATTTGCATGGAAAGAAGATAGTACACTTTGATCTTAAAAGTGACAACCTGCTCGTCAATCTCAGGGATCCTCATCGCCCAATTTGCAAGGTTGGGGATTTGGGTCTCTCAAAGGTGAAATGTCAGACATTAATATCAGGTGGTGTTCGGGGAACACTTCCATGGATGGCACCCGAGCTTCTAAATGGAACCAGTAGCCTTGTTTCTGAGAAGGTCGATGTGTTTTCATTCGGAATTGTCCTCTGGGAACTTTTCACCGGTGAAGAACCTTACGCCGACTTGCACTATGGAGCGATCATAGGTGGTATAGTTAGTAATACGCTACGGCCGCAGATTCCCGACTTTTGTGACATGGACTGGAAATTGCTGATGGAGAGATGTTGGTCTGCAGAACCATCAGAGAGGCCAAGCTTCACTGAGATCGTGAACGAACTACGGACCATGGCTACAAAGCTTCCTTCCAAAGAACAAGGCTCAACACAGGGACCACAATCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001666 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004712 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006082 GO:0006464 GO:0006468 GO:0006629 GO:0006720 GO:0006721 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009628 GO:0009685 GO:0009686 GO:0009719 GO:0009723 GO:0009725 GO:0009743 GO:0009744 GO:0009746 GO:0009750 GO:0009756 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0010104 GO:0010105 GO:0010182 GO:0010646 GO:0010648 GO:0010817 GO:0012505 GO:0016020 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019752 GO:0023051 GO:0023052 GO:0023057 GO:0031984 GO:0034284 GO:0034285 GO:0036211 GO:0036293 GO:0040034 GO:0042175 GO:0042221 GO:0042445 GO:0042446 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046777 GO:0048506 GO:0048509 GO:0048510 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051302 GO:0051716 GO:0065007 GO:0065008 GO:0070297 GO:0070298 GO:0070482 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071310 GO:0071322 GO:0071704 GO:0098827 GO:0140096 GO:1901564 GO:1901576 GO:1901700 GO:1901701 GO:1902531 GO:1902532 GO:2000026 GO:2000035 GO:2000069 GO:2000280
KEGG Pathways
Metabolic & Signaling
ko04010 map04010
Pfam Domains
Protein Families
PB1 Pkinase_Tyr

Protein Analysis

1089

Amino Acids

120.29

Weight (kDa)

5.03

Isoelectric Point (pI)

50.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PB1 PF00564 28 - 111 2.8e-15 PB1 domain
Pkinase PF00069 807 - 1067 6e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 808 - 1069 1.9e-59 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2402
Acc36I ACCTGC 1 cut(s) 2829
Acc65I GGTACC 1 cut(s) 1664
AccB1I GGYRCC 2 cut(s) 1664, 2941
AccB7I CCANNNNNTGG 3 cut(s) 74, 701, 1094
AccI GTMKAC 4 cut(s) 731, 1084, 1524, 2312
AciI CCGC 8 cut(s) 656, 1031, 1104, 1252, 1898, 1920, 2196, 3101
AcoI YGGCCR 1 cut(s) 3098
AcsI RAATTY 7 cut(s) 143, 472, 934, 1618, 2083, 2356, 2716
AcuI CTGAAG 3 cut(s) 1515, 2156, 2205
AfaI GTAC 5 cut(s) 838, 1029, 1069, 1666, 2796
AfiI CCNNNNNNNGG 5 cut(s) 74, 701, 1094, 1345, 1841
AflIII ACRYGT 1 cut(s) 915
AgeI ACCGGT 1 cut(s) 3029
AgsI TTSAA 8 cut(s) 770, 866, 934, 1187, 1386, 1496, 1937, 2323
AjnI CCWGG 5 cut(s) 1078, 1786, 1849, 2070, 2638
AjuI GAANNNNNNNTTGG 4 cut(s) 823, 846, 855, 878
Alw21I GWGCWC 2 cut(s) 1298, 2157
Alw26I GTCTC 7 cut(s) 671, 889, 1113, 1436, 1728, 1836, 2882
Ama87I CYCGRG 2 cut(s) 550, 2945
AoxI GGCC 4 cut(s) 759, 1789, 3098, 3176
ApeKI GCWGC 8 cut(s) 712, 715, 908, 1013, 1507, 1510, 1952, 1991
ApoI RAATTY 7 cut(s) 143, 472, 934, 1618, 2083, 2356, 2716
ArsI GACNNNNNNTTYG 2 cut(s) 2744, 2776
AseI ATTAAT 1 cut(s) 2903
AsiGI ACCGGT 1 cut(s) 3029
Asp700I GAANNNNTTC 2 cut(s) 1182, 1697
Asp718I GGTACC 1 cut(s) 1664
AspLEI GCGC 1 cut(s) 1906
AspS9I GGNCC 4 cut(s) 546, 2074, 3210, 3257
AsuC2I CCSGG 1 cut(s) 971
AsuII TTCGAA 2 cut(s) 2135, 2270
AvaI CYCGRG 2 cut(s) 550, 2945
AvaII GGWCC 4 cut(s) 546, 2074, 3210, 3257
AxyI CCTNAGG 1 cut(s) 1806
BamHI GGATCC 1 cut(s) 2839
BanI GGYRCC 2 cut(s) 1664, 2941
BanII GRGCYC 1 cut(s) 1298
Bbv12I GWGCWC 2 cut(s) 1298, 2157
BbvI GCAGC 8 cut(s) 724, 727, 895, 1000, 1519, 1522, 1939, 1978
BceAI ACGGC 1 cut(s) 3113
BciT130I CCWGG 5 cut(s) 1080, 1788, 1851, 2072, 2640
BcnI CCSGG 1 cut(s) 971
BcoDI GTCTC 7 cut(s) 671, 889, 1113, 1436, 1728, 1836, 2882
BfaI CTAG 8 cut(s) 63, 240, 453, 1503, 2019, 2345, 2435, 2582
BfmI CTRYAG 2 cut(s) 1038, 3159
BfuAI ACCTGC 1 cut(s) 2829
BglII AGATCT 1 cut(s) 290
BlpI GCTNAGC 1 cut(s) 1297
BmcAI AGTACT 1 cut(s) 838
Bme1390I CCNGG 6 cut(s) 971, 1080, 1788, 1851, 2072, 2640
Bme18I GGWCC 4 cut(s) 546, 2074, 3210, 3257
BmeT110I CYCGRG 2 cut(s) 550, 2945
BmgT120I GGNCC 4 cut(s) 546, 2074, 3210, 3257
BmiI GGNNCC 9 cut(s) 927, 1666, 2076, 2143, 2336, 2841, 2943, 2962, 3258
BmrFI CCNGG 6 cut(s) 971, 1080, 1788, 1851, 2072, 2640
BmsI GCATC 5 cut(s) 208, 322, 699, 1939, 1978
BpmI CTGGAG 2 cut(s) 1710, 2661
Bpu10I CCTNAGC 1 cut(s) 1434
Bpu1102I GCTNAGC 1 cut(s) 1297
Bpu14I TTCGAA 2 cut(s) 2135, 2270
BpuEI CTTGAG 3 cut(s) 695, 1095, 2438
BpuMI CCSGG 1 cut(s) 971
Bsa29I ATCGAT 2 cut(s) 2512, 2553
BsaAI YACGTR 1 cut(s) 2288
BsaBI GATNNNNATC 2 cut(s) 210, 2844
BsaI GGTCTC 2 cut(s) 1113, 2882
BsaJI CCNNGG 4 cut(s) 2078, 2145, 2933, 3213
BsaWI WCCGGW 1 cut(s) 3029
BsaXI ACNNNNNCTCC 6 cut(s) 1060, 1090, 1816, 1846, 2634, 2664
Bsc4I CCNNNNNNNGG 5 cut(s) 74, 701, 1094, 1345, 1841
Bse118I RCCGGY 2 cut(s) 757, 3029
Bse1I ACTGG 7 cut(s) 895, 956, 1631, 1668, 1727, 2964, 3134
Bse21I CCTNAGG 1 cut(s) 1806
Bse3DI GCAATG 1 cut(s) 2754
Bse8I GATNNNNATC 2 cut(s) 210, 2844
BseBI CCWGG 5 cut(s) 1080, 1788, 1851, 2072, 2640
BseCI ATCGAT 2 cut(s) 2512, 2553
BseDI CCNNGG 4 cut(s) 2078, 2145, 2933, 3213
BseJI GATNNNNATC 2 cut(s) 210, 2844
BseLI CCNNNNNNNGG 5 cut(s) 74, 701, 1094, 1345, 1841
BseMI GCAATG 1 cut(s) 2754
BseNI ACTGG 7 cut(s) 895, 956, 1631, 1668, 1727, 2964, 3134
BseRI GAGGAG 3 cut(s) 281, 2162, 2165
BseX3I CGGCCG 1 cut(s) 3098
BseXI GCAGC 8 cut(s) 724, 727, 895, 1000, 1519, 1522, 1939, 1978
BsgI GTGCAG 1 cut(s) 2052
Bsh1285I CGRYCG 1 cut(s) 3101
BshFI GGCC 4 cut(s) 761, 1791, 3100, 3178
BshNI GGYRCC 2 cut(s) 1664, 2941
BshTI ACCGGT 1 cut(s) 3029
BshVI ATCGAT 2 cut(s) 2512, 2553
BsiEI CGRYCG 1 cut(s) 3101
BsiHKAI GWGCWC 2 cut(s) 1298, 2157
BsiHKCI CYCGRG 2 cut(s) 550, 2945
BsiSI CCGG 3 cut(s) 758, 971, 3030
BslI CCNNNNNNNGG 5 cut(s) 74, 701, 1094, 1345, 1841
BsmAI GTCTC 7 cut(s) 671, 889, 1113, 1436, 1728, 1836, 2882
BsmI GAATGC 1 cut(s) 1234
BsnI GGCC 4 cut(s) 761, 1791, 3100, 3178
Bso31I GGTCTC 2 cut(s) 1113, 2882
BsoBI CYCGRG 2 cut(s) 550, 2945
Bsp119I TTCGAA 2 cut(s) 2135, 2270
Bsp1286I GDGCHC 2 cut(s) 1298, 2157
Bsp1720I GCTNAGC 1 cut(s) 1297
Bsp19I CCATGG 3 cut(s) 2078, 2933, 3213
BspACI CCGC 8 cut(s) 656, 1031, 1104, 1252, 1898, 1920, 2196, 3101
BspANI GGCC 4 cut(s) 761, 1791, 3100, 3178
BspDI ATCGAT 2 cut(s) 2512, 2553
BspHI TCATGA 2 cut(s) 1329, 2230
BspLI GGNNCC 9 cut(s) 927, 1666, 2076, 2143, 2336, 2841, 2943, 2962, 3258
BspMAI CTGCAG 1 cut(s) 3163
BspMI ACCTGC 1 cut(s) 2829
BspQI GCTCTTC 1 cut(s) 622
BspT104I TTCGAA 2 cut(s) 2135, 2270
BspT107I GGYRCC 2 cut(s) 1664, 2941
BspTNI GGTCTC 2 cut(s) 1113, 2882
BsrDI GCAATG 1 cut(s) 2754
BsrFI RCCGGY 2 cut(s) 757, 3029
BsrI ACTGG 7 cut(s) 895, 956, 1631, 1668, 1727, 2964, 3134
BssAI RCCGGY 2 cut(s) 757, 3029
BssECI CCNNGG 4 cut(s) 2078, 2145, 2933, 3213
BssNAI GTATAC 2 cut(s) 732, 1085
BssT1I CCWWGG 3 cut(s) 2078, 2933, 3213
Bst1107I GTATAC 2 cut(s) 732, 1085
Bst2UI CCWGG 5 cut(s) 1080, 1788, 1851, 2072, 2640
Bst4CI ACNGT 6 cut(s) 643, 682, 1830, 2211, 2458, 2659
Bst6I CTCTTC 1 cut(s) 622
BstBAI YACGTR 1 cut(s) 2288
BstBI TTCGAA 2 cut(s) 2135, 2270
BstC8I GCNNGC 4 cut(s) 2524, 2587, 2591, 2732
BstDSI CCRYGG 3 cut(s) 2078, 2933, 3213
BstEII GGTNACC 1 cut(s) 173
BstHHI GCGC 1 cut(s) 1906
BstMAI GTCTC 7 cut(s) 671, 889, 1113, 1436, 1728, 1836, 2882
BstMCI CGRYCG 1 cut(s) 3101
BstMWI GCNNNNNNNGC 5 cut(s) 1307, 1424, 2451, 2856, 3100
BstNI CCWGG 5 cut(s) 1080, 1788, 1851, 2072, 2640
BstNSI RCATGY 3 cut(s) 82, 919, 1592
BstPI GGTNACC 1 cut(s) 173
BstSCI CCNGG 6 cut(s) 969, 1078, 1786, 1849, 2070, 2638
BstSFI CTRYAG 2 cut(s) 1038, 3159
BstV1I GCAGC 8 cut(s) 724, 727, 895, 1000, 1519, 1522, 1939, 1978
BstX2I RGATCY 4 cut(s) 211, 290, 2438, 2839
BstYI RGATCY 4 cut(s) 211, 290, 2438, 2839
BstZ17I GTATAC 2 cut(s) 732, 1085
BstZI CGGCCG 1 cut(s) 3098
Bsu15I ATCGAT 2 cut(s) 2512, 2553
Bsu36I CCTNAGG 1 cut(s) 1806
BsuRI GGCC 4 cut(s) 761, 1791, 3100, 3178
BsuTUI ATCGAT 2 cut(s) 2512, 2553
BtgI CCRYGG 3 cut(s) 2078, 2933, 3213
BtgZI GCGATG 1 cut(s) 2831
BtsI GCAGTG 2 cut(s) 1053, 1428
BtsIMutI CAGTG 5 cut(s) 1053, 1428, 1749, 2481, 3186
BveI ACCTGC 1 cut(s) 2829
Cac8I GCNNGC 4 cut(s) 2524, 2587, 2591, 2732
CciI TCATGA 2 cut(s) 1329, 2230
CfoI GCGC 1 cut(s) 1906
Cfr10I RCCGGY 2 cut(s) 757, 3029
Cfr13I GGNCC 4 cut(s) 546, 2074, 3210, 3257
ClaI ATCGAT 2 cut(s) 2512, 2553
CseI GACGC 1 cut(s) 2723
Csp6I GTAC 5 cut(s) 837, 1028, 1068, 1665, 2795
CspAI ACCGGT 1 cut(s) 3029
CspCI CAANNNNNGTGG 2 cut(s) 2229, 2264
CviQI GTAC 5 cut(s) 837, 1028, 1068, 1665, 2795
EaeI YGGCCR 1 cut(s) 3098
EagI CGGCCG 1 cut(s) 3098
Eam1104I CTCTTC 1 cut(s) 622
EarI CTCTTC 1 cut(s) 622
EciI GGCGGA 1 cut(s) 645
Ecl136II GAGCTC 1 cut(s) 1296
EclXI CGGCCG 1 cut(s) 3098
Eco130I CCWWGG 3 cut(s) 2078, 2933, 3213
Eco24I GRGCYC 1 cut(s) 1298
Eco31I GGTCTC 2 cut(s) 1113, 2882
Eco32I GATATC 2 cut(s) 1327, 2329
Eco47I GGWCC 4 cut(s) 546, 2074, 3210, 3257
Eco52I CGGCCG 1 cut(s) 3098
Eco53kI GAGCTC 1 cut(s) 1296
Eco57I CTGAAG 3 cut(s) 1515, 2156, 2205
Eco81I CCTNAGG 1 cut(s) 1806
Eco88I CYCGRG 2 cut(s) 550, 2945
Eco91I GGTNACC 1 cut(s) 173
EcoICRI GAGCTC 1 cut(s) 1296
EcoO109I RGGNCCY 1 cut(s) 2074
EcoO65I GGTNACC 1 cut(s) 173
EcoRI GAATTC 2 cut(s) 472, 934
EcoRII CCWGG 5 cut(s) 1078, 1786, 1849, 2070, 2638
EcoRV GATATC 2 cut(s) 1327, 2329
EcoT14I CCWWGG 3 cut(s) 2078, 2933, 3213
EcoT22I ATGCAT 1 cut(s) 1236
EcoT38I GRGCYC 1 cut(s) 1298
ErhI CCWWGG 3 cut(s) 2078, 2933, 3213
FalI AAGNNNNNCTT 6 cut(s) 823, 855, 1390, 1422, 2206, 2238
FauI CCCGC 3 cut(s) 1097, 1245, 1927
FauNDI CATATG 4 cut(s) 1206, 1230, 1288, 1540
FblI GTMKAC 4 cut(s) 731, 1084, 1524, 2312
FriOI GRGCYC 1 cut(s) 1298
FspBI CTAG 8 cut(s) 63, 240, 453, 1503, 2019, 2345, 2435, 2582
GlaI GCGC 1 cut(s) 1905
GsuI CTGGAG 2 cut(s) 1710, 2661
HaeIII GGCC 4 cut(s) 761, 1791, 3100, 3178
HapII CCGG 3 cut(s) 758, 971, 3030
HgaI GACGC 1 cut(s) 2723
HhaI GCGC 1 cut(s) 1906
Hin6I GCGC 1 cut(s) 1904
HinP1I GCGC 1 cut(s) 1904
HincII GTYRAC 4 cut(s) 1364, 1582, 1636, 2738
HindII GTYRAC 4 cut(s) 1364, 1582, 1636, 2738
HindIII AAGCTT 4 cut(s) 783, 1369, 3181, 3224
HpaI GTTAAC 1 cut(s) 1582
HpaII CCGG 3 cut(s) 758, 971, 3030
Hpy99I CGWCG 1 cut(s) 2609
HpyAV CCTTC 6 cut(s) 911, 1539, 2180, 2232, 2977, 3240
HpyCH4III ACNGT 6 cut(s) 643, 682, 1830, 2211, 2458, 2659
HpyCH4IV ACGT 5 cut(s) 85, 90, 1929, 2287, 2604
HpyF10VI GCNNNNNNNGC 5 cut(s) 1307, 1424, 2451, 2856, 3100
HpySE526I ACGT 5 cut(s) 85, 90, 1929, 2287, 2604
HspAI GCGC 1 cut(s) 1904
KpnI GGTACC 1 cut(s) 1668
KspAI GTTAAC 1 cut(s) 1582
LguI GCTCTTC 1 cut(s) 622
LmnI GCTCC 5 cut(s) 931, 1597, 2147, 2152, 3062
Lsp1109I GCAGC 8 cut(s) 724, 727, 895, 1000, 1519, 1522, 1939, 1978
LweI GCATC 5 cut(s) 208, 322, 699, 1939, 1978
MaeI CTAG 8 cut(s) 63, 240, 453, 1503, 2019, 2345, 2435, 2582
MaeII ACGT 5 cut(s) 85, 90, 1929, 2287, 2604
MfeI CAATTG 1 cut(s) 1609
MflI RGATCY 4 cut(s) 211, 290, 2438, 2839
MhlI GDGCHC 2 cut(s) 1298, 2157
MlyI GAGTC 1 cut(s) 2199
MmeI TCCRAC 2 cut(s) 1363, 1855
Mph1103I ATGCAT 1 cut(s) 1236
MroXI GAANNNNTTC 2 cut(s) 1182, 1697
MslI CAYNNNNRTG 3 cut(s) 582, 920, 2932
MspA1I CMGCKG 1 cut(s) 1898
MspI CCGG 3 cut(s) 758, 971, 3030
MspR9I CCNGG 6 cut(s) 971, 1080, 1788, 1851, 2072, 2640
MunI CAATTG 1 cut(s) 1609
Mva1269I GAATGC 1 cut(s) 1234
MvaI CCWGG 5 cut(s) 1080, 1788, 1851, 2072, 2640
MwoI GCNNNNNNNGC 5 cut(s) 1307, 1424, 2451, 2856, 3100
NciI CCSGG 1 cut(s) 971
NcoI CCATGG 3 cut(s) 2078, 2933, 3213
NdeI CATATG 4 cut(s) 1206, 1230, 1288, 1540
NlaIV GGNNCC 9 cut(s) 927, 1666, 2076, 2143, 2336, 2841, 2943, 2962, 3258
NmeAIII GCCGAG 1 cut(s) 1577
NmuCI GTSAC 3 cut(s) 173, 2813, 3119
NsiI ATGCAT 1 cut(s) 1236
NspI RCATGY 3 cut(s) 82, 919, 1592
NspV TTCGAA 2 cut(s) 2135, 2270
PaeR7I CTCGAG 1 cut(s) 550
PagI TCATGA 2 cut(s) 1329, 2230
PciI ACATGT 1 cut(s) 915
PciSI GCTCTTC 1 cut(s) 622
PctI GAATGC 1 cut(s) 1234
PdmI GAANNNNTTC 2 cut(s) 1182, 1697
PflMI CCANNNNNTGG 3 cut(s) 74, 701, 1094
PinAI ACCGGT 1 cut(s) 3029
PleI GAGTC 1 cut(s) 2198
PpsI GAGTC 1 cut(s) 2198
Ppu21I YACGTR 1 cut(s) 2288
PpuMI RGGWCCY 1 cut(s) 2074
PscI ACATGT 1 cut(s) 915
PshBI ATTAAT 1 cut(s) 2903
PsiI TTATAA 1 cut(s) 2402
Psp124BI GAGCTC 1 cut(s) 1298
Psp5II RGGWCCY 1 cut(s) 2074
Psp6I CCWGG 5 cut(s) 1078, 1786, 1849, 2070, 2638
PspEI GGTNACC 1 cut(s) 173
PspGI CCWGG 5 cut(s) 1078, 1786, 1849, 2070, 2638
PspN4I GGNNCC 9 cut(s) 927, 1666, 2076, 2143, 2336, 2841, 2943, 2962, 3258
PspPI GGNCC 4 cut(s) 546, 2074, 3210, 3257
PspPPI RGGWCCY 1 cut(s) 2074
PspXI VCTCGAGB 1 cut(s) 550
PsrI GAACNNNNNNTAC 2 cut(s) 1464, 1496
PstI CTGCAG 1 cut(s) 3163
PsuI RGATCY 4 cut(s) 211, 290, 2438, 2839
RsaI GTAC 5 cut(s) 838, 1029, 1069, 1666, 2796
RsaNI GTAC 5 cut(s) 837, 1028, 1068, 1665, 2795
RseI CAYNNNNRTG 3 cut(s) 582, 920, 2932
SacI GAGCTC 1 cut(s) 1298
SapI GCTCTTC 1 cut(s) 622
Sau96I GGNCC 4 cut(s) 546, 2074, 3210, 3257
ScaI AGTACT 1 cut(s) 838
SchI GAGTC 1 cut(s) 2199
ScrFI CCNGG 6 cut(s) 971, 1080, 1788, 1851, 2072, 2640
SduI GDGCHC 2 cut(s) 1298, 2157
SfaNI GCATC 5 cut(s) 208, 322, 699, 1939, 1978
SfcI CTRYAG 2 cut(s) 1038, 3159
Sfr274I CTCGAG 1 cut(s) 550
SfuI TTCGAA 2 cut(s) 2135, 2270
SgrAI CRCCGGYG 1 cut(s) 3029
SinI GGWCC 4 cut(s) 546, 2074, 3210, 3257
SlaI CTCGAG 1 cut(s) 550
SmiMI CAYNNNNRTG 3 cut(s) 582, 920, 2932
SmlI CTYRAG 4 cut(s) 550, 674, 1110, 2417
SmoI CTYRAG 4 cut(s) 550, 674, 1110, 2417
SsiI CCGC 8 cut(s) 656, 1031, 1104, 1252, 1898, 1920, 2196, 3101
SspI AATATT 1 cut(s) 369
SspMI CTAG 8 cut(s) 63, 240, 453, 1503, 2019, 2345, 2435, 2582
SstI GAGCTC 1 cut(s) 1298
StyD4I CCNGG 6 cut(s) 969, 1078, 1786, 1849, 2070, 2638
StyI CCWWGG 3 cut(s) 2078, 2933, 3213
TaaI ACNGT 6 cut(s) 643, 682, 1830, 2211, 2458, 2659
TaiI ACGT 5 cut(s) 88, 93, 1932, 2290, 2607
TaqI TCGA 8 cut(s) 551, 1440, 1890, 2135, 2270, 2512, 2553, 2988
TatI WGTACW 2 cut(s) 836, 2794
TauI GCSGC 2 cut(s) 2198, 3103
TscAI CASTG 5 cut(s) 1060, 1435, 1756, 2488, 3193
TseFI GTSAC 3 cut(s) 173, 2813, 3119
TseI GCWGC 8 cut(s) 712, 715, 908, 1013, 1507, 1510, 1952, 1991
Tsp45I GTSAC 3 cut(s) 173, 2813, 3119
TspGWI ACGGA 2 cut(s) 1361, 3223
TspRI CASTG 5 cut(s) 1060, 1435, 1756, 2488, 3193
Van91I CCANNNNNTGG 3 cut(s) 74, 701, 1094
VpaK11BI GGWCC 4 cut(s) 546, 2074, 3210, 3257
VspI ATTAAT 1 cut(s) 2903
XapI RAATTY 7 cut(s) 143, 472, 934, 1618, 2083, 2356, 2716
XbaI TCTAGA 1 cut(s) 2344
XceI RCATGY 3 cut(s) 82, 919, 1592
XhoI CTCGAG 1 cut(s) 550
XmiI GTMKAC 4 cut(s) 731, 1084, 1524, 2312
XmnI GAANNNNTTC 2 cut(s) 1182, 1697
XspI CTAG 8 cut(s) 63, 240, 453, 1503, 2019, 2345, 2435, 2582
ZrmI AGTACT 1 cut(s) 838
Zsp2I ATGCAT 1 cut(s) 1236
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.