PB1 domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G46920 AT3G46920 |
| fragaria_vesca | FvH4_1g01730 FvH4_1g01730 FvH4_1g01730 FvH4_1g01730 |
| malus_domestica | MD02G1013000.v1.1 MD15G1159900.v1.1 |
| prunus_persica | Prupe.7G254900_v2.0.a1 Prupe.7G254900_v2.0.a1 Prupe.7G254900_v2.0.a1 Prupe.7G254900_v2.0.a1 Prupe.7G254900_v2.0.a1 Prupe.7G254900_v2.0.a1 Prupe.7G254900_v2.0.a1 Prupe.7G254900_v2.0.a1 Prupe.7G254900_v2.0.a1 Prupe.7G254900_v2.0.a1 Prupe.7G254900_v2.0.a1 |
| pyrus_communis | pycom02g01210 pycom15g14370 |
| rosa_chinensis | RchiOBHm_Chr2g0086681 |
| rosa_laevigata | RLG00000015773 |
| rosa_multiflora | Rmu_sc0002376.1_g000007 |
| rosa_roxburghii | Rroxscaffold_2G00154320 |
| rosa_rugosa | Rorug01G0468400 |
| rosa_samantha | Rh2AG020400 Rh2BG020300 Rh2CG019900 Rh2DG020800 |
| rosa_wichuraiana | Rw2G001670 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 3228 |
| Acc36I | ACCTGC | 2 cut(s) | 1714, 3681 |
| Acc65I | GGTACC | 2 cut(s) | 2725, 3350 |
| AccB1I | GGYRCC | 4 cut(s) | 2548, 2725, 3350, 3838 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 644 |
| AccBSI | CCGCTC | 1 cut(s) | 3442 |
| AccI | GTMKAC | 1 cut(s) | 3357 |
| AccII | CGCG | 1 cut(s) | 2020 |
| AclWI | GGATC | 9 cut(s) | 420, 789, 1208, 1994, 2834, 2921, 3021, 3055, 3731 |
| AcoI | YGGCCR | 4 cut(s) | 207, 3283, 3995, 4113 |
| AcsI | RAATTY | 7 cut(s) | 16, 1054, 2047, 2107, 2276, 2537, 2848 |
| AcuI | CTGAAG | 5 cut(s) | 891, 1589, 2302, 2499, 3414 |
| AcyI | GRCGYC | 1 cut(s) | 3225 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 1563, 1982 |
| AjnI | CCWGG | 7 cut(s) | 145, 1101, 1369, 1673, 2118, 2241, 2805 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 1650, 1682, 1938, 1970, 3814, 3846 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2662, 2694 |
| Alw21I | GWGCWC | 3 cut(s) | 3324, 3696, 3921 |
| Alw26I | GTCTC | 8 cut(s) | 1585, 1813, 1824, 1883, 2259, 2512, 3877, 4066 |
| Alw44I | GTGCAC | 1 cut(s) | 3692 |
| AlwI | GGATC | 9 cut(s) | 420, 789, 1208, 1994, 2834, 2921, 3021, 3055, 3731 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 350, 3799 |
| Ama87I | CYCGRG | 4 cut(s) | 1304, 1979, 3535, 4007 |
| ApaI | GGGCCC | 1 cut(s) | 221 |
| ApaLI | GTGCAC | 1 cut(s) | 3692 |
| ApoI | RAATTY | 7 cut(s) | 16, 1054, 2047, 2107, 2276, 2537, 2848 |
| AseI | ATTAAT | 1 cut(s) | 1260 |
| Asp718I | GGTACC | 2 cut(s) | 2725, 3350 |
| AspA2I | CCTAGG | 1 cut(s) | 221 |
| AspLEI | GCGC | 2 cut(s) | 2856, 3627 |
| AsuC2I | CCSGG | 6 cut(s) | 249, 1980, 1981, 2997, 3536, 3537 |
| AsuHPI | GGTGA | 7 cut(s) | 494, 1451, 1725, 2358, 3776, 3796, 4075 |
| AsuII | TTCGAA | 2 cut(s) | 377, 2753 |
| AvaI | CYCGRG | 4 cut(s) | 1304, 1979, 3535, 4007 |
| AvaII | GGWCC | 3 cut(s) | 1478, 1726, 1984 |
| AvrII | CCTAGG | 1 cut(s) | 221 |
| AxyI | CCTNAGG | 1 cut(s) | 4161 |
| BaeGI | GKGCMC | 3 cut(s) | 221, 3380, 3696 |
| BalI | TGGCCA | 1 cut(s) | 209 |
| BanI | GGYRCC | 4 cut(s) | 2548, 2725, 3350, 3838 |
| BanII | GRGCYC | 5 cut(s) | 75, 221, 260, 3324, 3921 |
| BbsI | GAAGAC | 2 cut(s) | 2397, 3030 |
| Bbv12I | GWGCWC | 3 cut(s) | 3324, 3696, 3921 |
| BbvCI | CCTCAGC | 3 cut(s) | 66, 2544, 3087 |
| BceAI | ACGGC | 1 cut(s) | 3109 |
| BciT130I | CCWGG | 7 cut(s) | 147, 1103, 1371, 1675, 2120, 2243, 2807 |
| BclI | TGATCA | 5 cut(s) | 10, 484, 547, 2401, 3063 |
| BcnI | CCSGG | 6 cut(s) | 249, 1980, 1981, 2997, 3536, 3537 |
| BcoDI | GTCTC | 8 cut(s) | 1585, 1813, 1824, 1883, 2259, 2512, 3877, 4066 |
| BfaI | CTAG | 4 cut(s) | 222, 716, 2382, 3257 |
| BfmI | CTRYAG | 7 cut(s) | 93, 342, 1122, 1224, 1242, 1545, 3290 |
| BfuAI | ACCTGC | 2 cut(s) | 1714, 3681 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 241 |
| BglII | AGATCT | 2 cut(s) | 860, 1901 |
| BlnI | CCTAGG | 1 cut(s) | 221 |
| BlpI | GCTNAGC | 1 cut(s) | 1090 |
| BmcAI | AGTACT | 1 cut(s) | 2484 |
| Bme18I | GGWCC | 3 cut(s) | 1478, 1726, 1984 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 1563, 1982 |
| BmeT110I | CYCGRG | 4 cut(s) | 1304, 1979, 3535, 4007 |
| BmrI | ACTGGG | 3 cut(s) | 1364, 2143, 3028 |
| BmsI | GCATC | 9 cut(s) | 216, 253, 778, 964, 1066, 1605, 1771, 2017, 4037 |
| BmuI | ACTGGG | 3 cut(s) | 1364, 2143, 3028 |
| BpiI | GAAGAC | 2 cut(s) | 2397, 3030 |
| BpmI | CTGGAG | 9 cut(s) | 372, 849, 1799, 1918, 2217, 2232, 2424, 2523, 3948 |
| Bpu10I | CCTNAGC | 3 cut(s) | 66, 2544, 3087 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1090 |
| Bpu14I | TTCGAA | 2 cut(s) | 377, 2753 |
| BpuEI | CTTGAG | 3 cut(s) | 105, 2244, 2725 |
| BpuMI | CCSGG | 6 cut(s) | 249, 1980, 1981, 2997, 3536, 3537 |
| BsaAI | YACGTR | 1 cut(s) | 4106 |
| BsaBI | GATNNNNATC | 3 cut(s) | 2460, 2838, 2865 |
| BsaHI | GRCGYC | 1 cut(s) | 3225 |
| BsaI | GGTCTC | 2 cut(s) | 1585, 1813 |
| Bse118I | RCCGGY | 3 cut(s) | 151, 1128, 3285 |
| Bse21I | CCTNAGG | 1 cut(s) | 4161 |
| Bse3DI | GCAATG | 4 cut(s) | 78, 2947, 3651, 3989 |
| Bse8I | GATNNNNATC | 3 cut(s) | 2460, 2838, 2865 |
| BseBI | CCWGG | 7 cut(s) | 147, 1103, 1371, 1675, 2120, 2243, 2807 |
| BseJI | GATNNNNATC | 3 cut(s) | 2460, 2838, 2865 |
| BseMI | GCAATG | 4 cut(s) | 78, 2947, 3651, 3989 |
| BseRI | GAGGAG | 7 cut(s) | 83, 1033, 2081, 2084, 2146, 2247, 3911 |
| BseSI | GKGCMC | 3 cut(s) | 221, 3380, 3696 |
| BseYI | CCCAGC | 4 cut(s) | 98, 356, 2143, 3419 |
| BsgI | GTGCAG | 5 cut(s) | 628, 740, 1742, 2063, 2967 |
| Bsh1236I | CGCG | 1 cut(s) | 2020 |
| BshNI | GGYRCC | 4 cut(s) | 2548, 2725, 3350, 3838 |
| BsiHKAI | GWGCWC | 3 cut(s) | 3324, 3696, 3921 |
| BsiHKCI | CYCGRG | 4 cut(s) | 1304, 1979, 3535, 4007 |
| BsiSI | CCGG | 7 cut(s) | 152, 248, 1129, 1980, 2996, 3286, 3536 |
| BslFI | GGGAC | 4 cut(s) | 1160, 1712, 2591, 3959 |
| BsmAI | GTCTC | 8 cut(s) | 1585, 1813, 1824, 1883, 2259, 2512, 3877, 4066 |
| BsmBI | CGTCTC | 1 cut(s) | 1824 |
| BsmFI | GGGAC | 4 cut(s) | 1160, 1712, 2591, 3959 |
| BsmI | GAATGC | 1 cut(s) | 2243 |
| Bso31I | GGTCTC | 2 cut(s) | 1585, 1813 |
| BsoBI | CYCGRG | 4 cut(s) | 1304, 1979, 3535, 4007 |
| Bsp119I | TTCGAA | 2 cut(s) | 377, 2753 |
| Bsp120I | GGGCCC | 1 cut(s) | 217 |
| Bsp1286I | GDGCHC | 7 cut(s) | 75, 221, 260, 3324, 3380, 3696, 3921 |
| Bsp1407I | TGTACA | 2 cut(s) | 931, 2915 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1090 |
| Bsp19I | CCATGG | 1 cut(s) | 3361 |
| BspFNI | CGCG | 1 cut(s) | 2020 |
| BspHI | TCATGA | 2 cut(s) | 2127, 3142 |
| BspMAI | CTGCAG | 4 cut(s) | 346, 1228, 1549, 3294 |
| BspMI | ACCTGC | 2 cut(s) | 1714, 3681 |
| BspPI | GGATC | 9 cut(s) | 420, 789, 1208, 1994, 2834, 2921, 3021, 3055, 3731 |
| BspQI | GCTCTTC | 1 cut(s) | 3312 |
| BspT104I | TTCGAA | 2 cut(s) | 377, 2753 |
| BspT107I | GGYRCC | 4 cut(s) | 2548, 2725, 3350, 3838 |
| BspTNI | GGTCTC | 2 cut(s) | 1585, 1813 |
| BsrBI | CCGCTC | 1 cut(s) | 3442 |
| BsrDI | GCAATG | 4 cut(s) | 78, 2947, 3651, 3989 |
| BsrFI | RCCGGY | 3 cut(s) | 151, 1128, 3285 |
| BsrGI | TGTACA | 2 cut(s) | 931, 2915 |
| BssAI | RCCGGY | 3 cut(s) | 151, 1128, 3285 |
| BssNI | GRCGYC | 1 cut(s) | 3225 |
| BssT1I | CCWWGG | 5 cut(s) | 221, 1987, 2843, 3361, 3830 |
| Bst2UI | CCWGG | 7 cut(s) | 147, 1103, 1371, 1675, 2120, 2243, 2807 |
| Bst6I | CTCTTC | 3 cut(s) | 2818, 3312, 3605 |
| BstACI | GRCGYC | 1 cut(s) | 3225 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1748 |
| BstAUI | TGTACA | 2 cut(s) | 931, 2915 |
| BstBAI | YACGTR | 1 cut(s) | 4106 |
| BstBI | TTCGAA | 2 cut(s) | 377, 2753 |
| BstC8I | GCNNGC | 8 cut(s) | 1407, 1427, 1519, 1760, 1843, 2219, 3206, 3287 |
| BstDSI | CCRYGG | 1 cut(s) | 3361 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 1886, 3779 |
| BstFNI | CGCG | 1 cut(s) | 2020 |
| BstHHI | GCGC | 2 cut(s) | 2856, 3627 |
| BstMAI | GTCTC | 8 cut(s) | 1585, 1813, 1824, 1883, 2259, 2512, 3877, 4066 |
| BstNI | CCWGG | 7 cut(s) | 147, 1103, 1371, 1675, 2120, 2243, 2807 |
| BstNSI | RCATGY | 1 cut(s) | 3208 |
| BstSFI | CTRYAG | 7 cut(s) | 93, 342, 1122, 1224, 1242, 1545, 3290 |
| BstSLI | GKGCMC | 3 cut(s) | 221, 3380, 3696 |
| BstUI | CGCG | 1 cut(s) | 2020 |
| BstV2I | GAAGAC | 2 cut(s) | 2397, 3030 |
| BstX2I | RGATCY | 9 cut(s) | 781, 860, 1213, 1901, 1999, 2839, 2926, 3013, 3736 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2565 |
| BstYI | RGATCY | 9 cut(s) | 781, 860, 1213, 1901, 1999, 2839, 2926, 3013, 3736 |
| Bsu36I | CCTNAGG | 1 cut(s) | 4161 |
| BtgI | CCRYGG | 1 cut(s) | 3361 |
| BtsI | GCAGTG | 3 cut(s) | 1188, 1470, 1554 |
| BveI | ACCTGC | 2 cut(s) | 1714, 3681 |
| Cac8I | GCNNGC | 8 cut(s) | 1407, 1427, 1519, 1760, 1843, 2219, 3206, 3287 |
| CaiI | CAGNNNCTG | 2 cut(s) | 350, 3799 |
| CciI | TCATGA | 2 cut(s) | 2127, 3142 |
| CfoI | GCGC | 2 cut(s) | 2856, 3627 |
| Cfr10I | RCCGGY | 3 cut(s) | 151, 1128, 3285 |
| Cfr9I | CCCGGG | 2 cut(s) | 1979, 3535 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 252, 287, 3633, 3668 |
| DraI | TTTAAA | 1 cut(s) | 45 |
| DriI | GACNNNNNGTC | 2 cut(s) | 1563, 1982 |
| EaeI | YGGCCR | 4 cut(s) | 207, 3283, 3995, 4113 |
| Eam1104I | CTCTTC | 3 cut(s) | 2818, 3312, 3605 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 1563, 1982 |
| EarI | CTCTTC | 3 cut(s) | 2818, 3312, 3605 |
| EciI | GGCGGA | 1 cut(s) | 2862 |
| Ecl136II | GAGCTC | 2 cut(s) | 3322, 3919 |
| Eco130I | CCWWGG | 5 cut(s) | 221, 1987, 2843, 3361, 3830 |
| Eco147I | AGGCCT | 2 cut(s) | 40, 2217 |
| Eco24I | GRGCYC | 5 cut(s) | 75, 221, 260, 3324, 3921 |
| Eco31I | GGTCTC | 2 cut(s) | 1585, 1813 |
| Eco47I | GGWCC | 3 cut(s) | 1478, 1726, 1984 |
| Eco53kI | GAGCTC | 2 cut(s) | 3322, 3919 |
| Eco57I | CTGAAG | 5 cut(s) | 891, 1589, 2302, 2499, 3414 |
| Eco81I | CCTNAGG | 1 cut(s) | 4161 |
| Eco88I | CYCGRG | 4 cut(s) | 1304, 1979, 3535, 4007 |
| EcoICRI | GAGCTC | 2 cut(s) | 3322, 3919 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 1886, 3779 |
| EcoO109I | RGGNCCY | 3 cut(s) | 217, 218, 1726 |
| EcoRI | GAATTC | 4 cut(s) | 1054, 2047, 2107, 2537 |
| EcoRII | CCWGG | 7 cut(s) | 145, 1101, 1369, 1673, 2118, 2241, 2805 |
| EcoT14I | CCWWGG | 5 cut(s) | 221, 1987, 2843, 3361, 3830 |
| EcoT22I | ATGCAT | 2 cut(s) | 2520, 2626 |
| EcoT38I | GRGCYC | 5 cut(s) | 75, 221, 260, 3324, 3921 |
| ErhI | CCWWGG | 5 cut(s) | 221, 1987, 2843, 3361, 3830 |
| Esp3I | CGTCTC | 1 cut(s) | 1824 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1027, 1059, 2082, 2114 |
| FaqI | GGGAC | 4 cut(s) | 1160, 1712, 2591, 3959 |
| FauI | CCCGC | 2 cut(s) | 83, 157 |
| FauNDI | CATATG | 5 cut(s) | 739, 1554, 1785, 3163, 3940 |
| FbaI | TGATCA | 5 cut(s) | 10, 484, 547, 2401, 3063 |
| FblI | GTMKAC | 1 cut(s) | 3357 |
| FriOI | GRGCYC | 5 cut(s) | 75, 221, 260, 3324, 3921 |
| FspBI | CTAG | 4 cut(s) | 222, 716, 2382, 3257 |
| GlaI | GCGC | 2 cut(s) | 2855, 3626 |
| GsaI | CCCAGC | 4 cut(s) | 102, 360, 2147, 3423 |
| GsuI | CTGGAG | 9 cut(s) | 372, 849, 1799, 1918, 2217, 2232, 2424, 2523, 3948 |
| HapII | CCGG | 7 cut(s) | 152, 248, 1129, 1980, 2996, 3286, 3536 |
| HhaI | GCGC | 2 cut(s) | 2856, 3627 |
| Hin1I | GRCGYC | 1 cut(s) | 3225 |
| Hin6I | GCGC | 2 cut(s) | 2854, 3625 |
| HinP1I | GCGC | 2 cut(s) | 2854, 3625 |
| HincII | GTYRAC | 3 cut(s) | 1417, 1826, 2179 |
| HindII | GTYRAC | 3 cut(s) | 1417, 1826, 2179 |
| HindIII | AAGCTT | 1 cut(s) | 1407 |
| HpaI | GTTAAC | 2 cut(s) | 1417, 2179 |
| HpaII | CCGG | 7 cut(s) | 152, 248, 1129, 1980, 2996, 3286, 3536 |
| HphI | GGTGA | 7 cut(s) | 494, 1451, 1725, 2358, 3776, 3796, 4075 |
| Hpy166II | GTNNAC | 7 cut(s) | 703, 1417, 1826, 2179, 2525, 3358, 3694 |
| Hpy8I | GTNNAC | 7 cut(s) | 703, 1417, 1826, 2179, 2525, 3358, 3694 |
| Hpy99I | CGWCG | 1 cut(s) | 779 |
| HpyAV | CCTTC | 9 cut(s) | 826, 1578, 1940, 2326, 2379, 2421, 3176, 3438, 3874 |
| HpyCH4IV | ACGT | 3 cut(s) | 3225, 3631, 4105 |
| HpySE526I | ACGT | 3 cut(s) | 3225, 3631, 4105 |
| Hsp92I | GRCGYC | 1 cut(s) | 3225 |
| HspAI | GCGC | 2 cut(s) | 2854, 3625 |
| KpnI | GGTACC | 2 cut(s) | 2729, 3354 |
| KroI | GCCGGC | 1 cut(s) | 3285 |
| KroNI | GCCGGC | 1 cut(s) | 3287 |
| Ksp22I | TGATCA | 5 cut(s) | 10, 484, 547, 2401, 3063 |
| KspAI | GTTAAC | 2 cut(s) | 1417, 2179 |
| LguI | GCTCTTC | 1 cut(s) | 3312 |
| LweI | GCATC | 9 cut(s) | 216, 253, 778, 964, 1066, 1605, 1771, 2017, 4037 |
| MaeI | CTAG | 4 cut(s) | 222, 716, 2382, 3257 |
| MaeII | ACGT | 3 cut(s) | 3225, 3631, 4105 |
| MbiI | CCGCTC | 1 cut(s) | 3442 |
| MfeI | CAATTG | 3 cut(s) | 264, 2031, 2897 |
| MflI | RGATCY | 9 cut(s) | 781, 860, 1213, 1901, 1999, 2839, 2926, 3013, 3736 |
| MhlI | GDGCHC | 7 cut(s) | 75, 221, 260, 3324, 3380, 3696, 3921 |
| MlsI | TGGCCA | 1 cut(s) | 209 |
| MluNI | TGGCCA | 1 cut(s) | 209 |
| MlyI | GAGTC | 9 cut(s) | 1573, 1624, 2261, 2514, 2613, 2804, 3164, 3622, 4019 |
| MmeI | TCCRAC | 4 cut(s) | 643, 1990, 2498, 3195 |
| Mox20I | TGGCCA | 1 cut(s) | 209 |
| Mph1103I | ATGCAT | 2 cut(s) | 2520, 2626 |
| MroNI | GCCGGC | 1 cut(s) | 3285 |
| MscI | TGGCCA | 1 cut(s) | 209 |
| MslI | CAYNNNNRTG | 7 cut(s) | 249, 948, 954, 1262, 1647, 2563, 3498 |
| Msp20I | TGGCCA | 1 cut(s) | 209 |
| MspA1I | CMGCKG | 5 cut(s) | 98, 350, 1694, 1777, 3053 |
| MspI | CCGG | 7 cut(s) | 152, 248, 1129, 1980, 2996, 3286, 3536 |
| MunI | CAATTG | 3 cut(s) | 264, 2031, 2897 |
| Mva1269I | GAATGC | 1 cut(s) | 2243 |
| MvaI | CCWGG | 7 cut(s) | 147, 1103, 1371, 1675, 2120, 2243, 2807 |
| MvnI | CGCG | 1 cut(s) | 2020 |
| NaeI | GCCGGC | 1 cut(s) | 3287 |
| NciI | CCSGG | 6 cut(s) | 249, 1980, 1981, 2997, 3536, 3537 |
| NcoI | CCATGG | 1 cut(s) | 3361 |
| NdeI | CATATG | 5 cut(s) | 739, 1554, 1785, 3163, 3940 |
| NgoMIV | GCCGGC | 1 cut(s) | 3285 |
| NmuCI | GTSAC | 3 cut(s) | 2364, 3308, 3710 |
| NsiI | ATGCAT | 2 cut(s) | 2520, 2626 |
| NspI | RCATGY | 1 cut(s) | 3208 |
| NspV | TTCGAA | 2 cut(s) | 377, 2753 |
| PaeI | GCATGC | 1 cut(s) | 3208 |
| PagI | TCATGA | 2 cut(s) | 2127, 3142 |
| PasI | CCCWGGG | 3 cut(s) | 146, 1674, 2119 |
| PceI | AGGCCT | 2 cut(s) | 40, 2217 |
| PciSI | GCTCTTC | 1 cut(s) | 3312 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 3231 |
| PctI | GAATGC | 1 cut(s) | 2243 |
| PdiI | GCCGGC | 1 cut(s) | 3287 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 644 |
| PfoI | TCCNGGA | 1 cut(s) | 2805 |
| PleI | GAGTC | 9 cut(s) | 1572, 1624, 2260, 2513, 2612, 2804, 3163, 3621, 4018 |
| PpsI | GAGTC | 9 cut(s) | 1572, 1624, 2260, 2513, 2612, 2804, 3163, 3621, 4018 |
| Ppu21I | YACGTR | 1 cut(s) | 4106 |
| PpuMI | RGGWCCY | 1 cut(s) | 1726 |
| PshBI | ATTAAT | 1 cut(s) | 1260 |
| Psp124BI | GAGCTC | 2 cut(s) | 3324, 3921 |
| Psp5II | RGGWCCY | 1 cut(s) | 1726 |
| Psp6I | CCWGG | 7 cut(s) | 145, 1101, 1369, 1673, 2118, 2241, 2805 |
| PspFI | CCCAGC | 4 cut(s) | 98, 356, 2143, 3419 |
| PspGI | CCWGG | 7 cut(s) | 145, 1101, 1369, 1673, 2118, 2241, 2805 |
| PspOMI | GGGCCC | 1 cut(s) | 217 |
| PspPPI | RGGWCCY | 1 cut(s) | 1726 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 3334, 3366 |
| PstI | CTGCAG | 4 cut(s) | 346, 1228, 1549, 3294 |
| PstNI | CAGNNNCTG | 2 cut(s) | 350, 3799 |
| PsuI | RGATCY | 9 cut(s) | 781, 860, 1213, 1901, 1999, 2839, 2926, 3013, 3736 |
| PvuII | CAGCTG | 3 cut(s) | 98, 350, 1694 |
| RseI | CAYNNNNRTG | 7 cut(s) | 249, 948, 954, 1262, 1647, 2563, 3498 |
| SacI | GAGCTC | 2 cut(s) | 3324, 3921 |
| SapI | GCTCTTC | 1 cut(s) | 3312 |
| ScaI | AGTACT | 1 cut(s) | 2484 |
| SchI | GAGTC | 9 cut(s) | 1573, 1624, 2261, 2514, 2613, 2804, 3164, 3622, 4019 |
| SduI | GDGCHC | 7 cut(s) | 75, 221, 260, 3324, 3380, 3696, 3921 |
| SfaNI | GCATC | 9 cut(s) | 216, 253, 778, 964, 1066, 1605, 1771, 2017, 4037 |
| SfcI | CTRYAG | 7 cut(s) | 93, 342, 1122, 1224, 1242, 1545, 3290 |
| SfuI | TTCGAA | 2 cut(s) | 377, 2753 |
| SinI | GGWCC | 3 cut(s) | 1478, 1726, 1984 |
| SmaI | CCCGGG | 2 cut(s) | 1981, 3537 |
| SmiMI | CAYNNNNRTG | 7 cut(s) | 249, 948, 954, 1262, 1647, 2563, 3498 |
| SmlI | CTYRAG | 3 cut(s) | 120, 2259, 2704 |
| SmoI | CTYRAG | 3 cut(s) | 120, 2259, 2704 |
| SphI | GCATGC | 1 cut(s) | 3208 |
| SseBI | AGGCCT | 2 cut(s) | 40, 2217 |
| SspI | AATATT | 1 cut(s) | 3239 |
| SspMI | CTAG | 4 cut(s) | 222, 716, 2382, 3257 |
| SstI | GAGCTC | 2 cut(s) | 3324, 3921 |
| StuI | AGGCCT | 2 cut(s) | 40, 2217 |
| StyI | CCWWGG | 5 cut(s) | 221, 1987, 2843, 3361, 3830 |
| TaiI | ACGT | 3 cut(s) | 3228, 3634, 4108 |
| TaqI | TCGA | 7 cut(s) | 377, 1172, 1633, 2753, 3200, 3234, 3733 |
| TatI | WGTACW | 6 cut(s) | 931, 2482, 2522, 2915, 3523, 4135 |
| TauI | GCSGC | 2 cut(s) | 3997, 4118 |
| TseFI | GTSAC | 3 cut(s) | 2364, 3308, 3710 |
| Tsp45I | GTSAC | 3 cut(s) | 2364, 3308, 3710 |
| TspGWI | ACGGA | 1 cut(s) | 1493 |
| TspMI | CCCGGG | 2 cut(s) | 1979, 3535 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 644 |
| VneI | GTGCAC | 1 cut(s) | 3692 |
| VpaK11BI | GGWCC | 3 cut(s) | 1478, 1726, 1984 |
| VspI | ATTAAT | 1 cut(s) | 1260 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 1886, 3779 |
| XapI | RAATTY | 7 cut(s) | 16, 1054, 2047, 2107, 2276, 2537, 2848 |
| XceI | RCATGY | 1 cut(s) | 3208 |
| XmaI | CCCGGG | 2 cut(s) | 1979, 3535 |
| XmaJI | CCTAGG | 1 cut(s) | 221 |
| XmiI | GTMKAC | 1 cut(s) | 3357 |
| XspI | CTAG | 4 cut(s) | 222, 716, 2382, 3257 |
| ZraI | GACGTC | 1 cut(s) | 3226 |
| ZrmI | AGTACT | 1 cut(s) | 2484 |
| Zsp2I | ATGCAT | 2 cut(s) | 2520, 2626 |