PB1 domain
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G46920 AT3G46920 |
| fragaria_vesca | FvH4_1g01730 FvH4_1g01730 FvH4_1g01730 FvH4_1g01730 |
| malus_domestica | MD02G1013000.v1.1 MD15G1159900.v1.1 |
| prunus_persica | Prupe.7G254900_v2.0.a1 Prupe.7G254900_v2.0.a1 Prupe.7G254900_v2.0.a1 Prupe.7G254900_v2.0.a1 Prupe.7G254900_v2.0.a1 Prupe.7G254900_v2.0.a1 Prupe.7G254900_v2.0.a1 Prupe.7G254900_v2.0.a1 Prupe.7G254900_v2.0.a1 Prupe.7G254900_v2.0.a1 Prupe.7G254900_v2.0.a1 |
| pyrus_communis | pycom02g01210 pycom15g14370 |
| rosa_chinensis | RchiOBHm_Chr2g0086681 |
| rosa_laevigata | RLG00000015773 |
| rosa_multiflora | Rmu_sc0002376.1_g000007 |
| rosa_roxburghii | Rroxscaffold_2G00154320 |
| rosa_rugosa | Rorug01G0468400 |
| rosa_samantha | Rh2AG020400 Rh2BG020300 Rh2CG019900 Rh2DG020800 |
| rosa_wichuraiana | Rw2G001670 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 3315 |
| Acc36I | ACCTGC | 2 cut(s) | 1714, 3768 |
| Acc65I | GGTACC | 3 cut(s) | 2293, 2818, 3437 |
| AccB1I | GGYRCC | 5 cut(s) | 2293, 2641, 2818, 3437, 3925 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 644, 2303 |
| AccBSI | CCGCTC | 1 cut(s) | 3529 |
| AccI | GTMKAC | 1 cut(s) | 3444 |
| AccIII | TCCGGA | 1 cut(s) | 2326 |
| AclWI | GGATC | 8 cut(s) | 420, 789, 1208, 2087, 2927, 3014, 3818, 4100 |
| AcoI | YGGCCR | 4 cut(s) | 207, 3370, 4082, 4200 |
| AcsI | RAATTY | 6 cut(s) | 16, 1054, 2140, 2369, 2630, 2941 |
| AcuI | CTGAAG | 5 cut(s) | 891, 1589, 2395, 2592, 3501 |
| AcyI | GRCGYC | 1 cut(s) | 3312 |
| AfeI | AGCGCT | 1 cut(s) | 259 |
| AhdI | GACNNNNNGTC | 4 cut(s) | 1384, 1476, 1563, 2075 |
| AjnI | CCWGG | 7 cut(s) | 145, 1101, 1369, 1673, 2211, 2334, 2898 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1650, 1682, 2031, 2063 |
| AleI | CACNNNNGTG | 1 cut(s) | 4044 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2755, 2787 |
| Alw21I | GWGCWC | 3 cut(s) | 3411, 3783, 4008 |
| Alw26I | GTCTC | 7 cut(s) | 1585, 1917, 1976, 2352, 2605, 3964, 4153 |
| Alw44I | GTGCAC | 1 cut(s) | 3779 |
| AlwI | GGATC | 8 cut(s) | 420, 789, 1208, 2087, 2927, 3014, 3818, 4100 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 350, 3886 |
| Ama87I | CYCGRG | 2 cut(s) | 2072, 3622 |
| Aor13HI | TCCGGA | 1 cut(s) | 2326 |
| Aor51HI | AGCGCT | 1 cut(s) | 259 |
| ApaI | GGGCCC | 1 cut(s) | 221 |
| ApaLI | GTGCAC | 1 cut(s) | 3779 |
| ApoI | RAATTY | 6 cut(s) | 16, 1054, 2140, 2369, 2630, 2941 |
| AseI | ATTAAT | 1 cut(s) | 1260 |
| Asp718I | GGTACC | 3 cut(s) | 2293, 2818, 3437 |
| AspA2I | CCTAGG | 1 cut(s) | 221 |
| AspLEI | GCGC | 4 cut(s) | 260, 2949, 3300, 3714 |
| AsuC2I | CCSGG | 7 cut(s) | 249, 1901, 2073, 2074, 3090, 3623, 3624 |
| AsuHPI | GGTGA | 7 cut(s) | 208, 494, 1451, 1725, 2451, 3863, 3883 |
| AsuII | TTCGAA | 1 cut(s) | 377 |
| AvaI | CYCGRG | 2 cut(s) | 2072, 3622 |
| AvaII | GGWCC | 4 cut(s) | 1478, 1726, 1903, 2077 |
| AvrII | CCTAGG | 1 cut(s) | 221 |
| AxyI | CCTNAGG | 1 cut(s) | 1305 |
| BaeGI | GKGCMC | 3 cut(s) | 221, 3467, 3783 |
| BalI | TGGCCA | 1 cut(s) | 209 |
| BanI | GGYRCC | 5 cut(s) | 2293, 2641, 2818, 3437, 3925 |
| BanII | GRGCYC | 4 cut(s) | 75, 221, 3411, 4008 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2082, 2114 |
| BbsI | GAAGAC | 2 cut(s) | 1860, 2490 |
| Bbv12I | GWGCWC | 3 cut(s) | 3411, 3783, 4008 |
| BbvCI | CCTCAGC | 2 cut(s) | 66, 3174 |
| BceAI | ACGGC | 1 cut(s) | 3196 |
| BciT130I | CCWGG | 7 cut(s) | 147, 1103, 1371, 1675, 2213, 2336, 2900 |
| BciVI | GTATCC | 1 cut(s) | 1839 |
| BclI | TGATCA | 6 cut(s) | 10, 484, 547, 2188, 2494, 3150 |
| BcnI | CCSGG | 7 cut(s) | 249, 1901, 2073, 2074, 3090, 3623, 3624 |
| BcoDI | GTCTC | 7 cut(s) | 1585, 1917, 1976, 2352, 2605, 3964, 4153 |
| BfaI | CTAG | 5 cut(s) | 222, 716, 2315, 2475, 2579 |
| BfmI | CTRYAG | 6 cut(s) | 93, 342, 1224, 1242, 1545, 3377 |
| BfoI | RGCGCY | 1 cut(s) | 261 |
| BfuAI | ACCTGC | 2 cut(s) | 1714, 3768 |
| BfuI | GTATCC | 1 cut(s) | 1839 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 241 |
| BglII | AGATCT | 2 cut(s) | 860, 1994 |
| BlnI | CCTAGG | 1 cut(s) | 221 |
| BlpI | GCTNAGC | 1 cut(s) | 1090 |
| BmcAI | AGTACT | 1 cut(s) | 2577 |
| Bme18I | GGWCC | 4 cut(s) | 1478, 1726, 1903, 2077 |
| BmeRI | GACNNNNNGTC | 4 cut(s) | 1384, 1476, 1563, 2075 |
| BmeT110I | CYCGRG | 2 cut(s) | 2072, 3622 |
| BmrI | ACTGGG | 4 cut(s) | 1364, 1901, 2136, 3121 |
| BmuI | ACTGGG | 4 cut(s) | 1364, 1901, 2136, 3121 |
| BpiI | GAAGAC | 2 cut(s) | 1860, 2490 |
| BpmI | CTGGAG | 7 cut(s) | 372, 849, 2011, 2325, 2517, 2616, 4035 |
| Bpu10I | CCTNAGC | 2 cut(s) | 66, 3174 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1090 |
| Bpu14I | TTCGAA | 1 cut(s) | 377 |
| BpuEI | CTTGAG | 2 cut(s) | 105, 2818 |
| BpuMI | CCSGG | 7 cut(s) | 249, 1901, 2073, 2074, 3090, 3623, 3624 |
| BsaAI | YACGTR | 1 cut(s) | 4193 |
| BsaBI | GATNNNNATC | 2 cut(s) | 2931, 2958 |
| BsaHI | GRCGYC | 1 cut(s) | 3312 |
| BsaI | GGTCTC | 1 cut(s) | 1585 |
| BsaWI | WCCGGW | 3 cut(s) | 193, 2326, 3893 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 1012, 1042, 2688, 2718, 2755, 2785, 3618, 3648 |
| Bse118I | RCCGGY | 4 cut(s) | 151, 235, 1128, 3372 |
| Bse21I | CCTNAGG | 1 cut(s) | 1305 |
| Bse3DI | GCAATG | 4 cut(s) | 78, 3040, 3738, 4076 |
| Bse8I | GATNNNNATC | 2 cut(s) | 2931, 2958 |
| BseAI | TCCGGA | 1 cut(s) | 2326 |
| BseBI | CCWGG | 7 cut(s) | 147, 1103, 1371, 1675, 2213, 2336, 2900 |
| BseJI | GATNNNNATC | 2 cut(s) | 2931, 2958 |
| BseMI | GCAATG | 4 cut(s) | 78, 3040, 3738, 4076 |
| BseRI | GAGGAG | 6 cut(s) | 83, 1033, 2174, 2177, 2239, 3998 |
| BseSI | GKGCMC | 3 cut(s) | 221, 3467, 3783 |
| BseYI | CCCAGC | 3 cut(s) | 98, 356, 2236 |
| BsgI | GTGCAG | 5 cut(s) | 628, 740, 1742, 2156, 3060 |
| BshNI | GGYRCC | 5 cut(s) | 2293, 2641, 2818, 3437, 3925 |
| BsiHKAI | GWGCWC | 3 cut(s) | 3411, 3783, 4008 |
| BsiHKCI | CYCGRG | 2 cut(s) | 2072, 3622 |
| BslFI | GGGAC | 7 cut(s) | 1160, 1483, 1712, 1889, 2684, 3922, 4046 |
| BsmAI | GTCTC | 7 cut(s) | 1585, 1917, 1976, 2352, 2605, 3964, 4153 |
| BsmBI | CGTCTC | 1 cut(s) | 1917 |
| BsmFI | GGGAC | 7 cut(s) | 1160, 1483, 1712, 1889, 2684, 3922, 4046 |
| BsmI | GAATGC | 2 cut(s) | 2113, 2336 |
| Bso31I | GGTCTC | 1 cut(s) | 1585 |
| BsoBI | CYCGRG | 2 cut(s) | 2072, 3622 |
| Bsp119I | TTCGAA | 1 cut(s) | 377 |
| Bsp120I | GGGCCC | 1 cut(s) | 217 |
| Bsp1286I | GDGCHC | 6 cut(s) | 75, 221, 3411, 3467, 3783, 4008 |
| Bsp13I | TCCGGA | 1 cut(s) | 2326 |
| Bsp1407I | TGTACA | 1 cut(s) | 3008 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1090 |
| Bsp19I | CCATGG | 2 cut(s) | 3448, 3917 |
| BspEI | TCCGGA | 1 cut(s) | 2326 |
| BspHI | TCATGA | 2 cut(s) | 2220, 3229 |
| BspMAI | CTGCAG | 4 cut(s) | 346, 1228, 1549, 3381 |
| BspMI | ACCTGC | 2 cut(s) | 1714, 3768 |
| BspPI | GGATC | 8 cut(s) | 420, 789, 1208, 2087, 2927, 3014, 3818, 4100 |
| BspQI | GCTCTTC | 1 cut(s) | 3399 |
| BspT104I | TTCGAA | 1 cut(s) | 377 |
| BspT107I | GGYRCC | 5 cut(s) | 2293, 2641, 2818, 3437, 3925 |
| BspTNI | GGTCTC | 1 cut(s) | 1585 |
| BsrBI | CCGCTC | 1 cut(s) | 3529 |
| BsrDI | GCAATG | 4 cut(s) | 78, 3040, 3738, 4076 |
| BsrFI | RCCGGY | 4 cut(s) | 151, 235, 1128, 3372 |
| BsrGI | TGTACA | 1 cut(s) | 3008 |
| BssAI | RCCGGY | 4 cut(s) | 151, 235, 1128, 3372 |
| BssNI | GRCGYC | 1 cut(s) | 3312 |
| BssT1I | CCWWGG | 5 cut(s) | 221, 2080, 2936, 3448, 3917 |
| Bst2UI | CCWGG | 7 cut(s) | 147, 1103, 1371, 1675, 2213, 2336, 2900 |
| Bst4CI | ACNGT | 9 cut(s) | 287, 1246, 1327, 1339, 2244, 2737, 3442, 3643, 3999 |
| Bst6I | CTCTTC | 4 cut(s) | 2103, 2911, 3399, 3692 |
| BstACI | GRCGYC | 1 cut(s) | 3312 |
| BstAUI | TGTACA | 1 cut(s) | 3008 |
| BstBAI | YACGTR | 1 cut(s) | 4193 |
| BstBI | TTCGAA | 1 cut(s) | 377 |
| BstC8I | GCNNGC | 9 cut(s) | 1407, 1427, 1519, 1760, 1936, 2312, 2355, 3293, 3374 |
| BstDSI | CCRYGG | 2 cut(s) | 3448, 3917 |
| BstENI | CCTNNNNNAGG | 3 cut(s) | 1164, 1979, 3866 |
| BstH2I | RGCGCY | 1 cut(s) | 261 |
| BstHHI | GCGC | 4 cut(s) | 260, 2949, 3300, 3714 |
| BstMAI | GTCTC | 7 cut(s) | 1585, 1917, 1976, 2352, 2605, 3964, 4153 |
| BstNI | CCWGG | 7 cut(s) | 147, 1103, 1371, 1675, 2213, 2336, 2900 |
| BstNSI | RCATGY | 1 cut(s) | 3295 |
| BstSFI | CTRYAG | 6 cut(s) | 93, 342, 1224, 1242, 1545, 3377 |
| BstSLI | GKGCMC | 3 cut(s) | 221, 3467, 3783 |
| BstV2I | GAAGAC | 2 cut(s) | 1860, 2490 |
| BstX2I | RGATCY | 8 cut(s) | 781, 860, 1213, 1994, 2092, 2932, 3019, 3823 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1849, 2658 |
| BstYI | RGATCY | 8 cut(s) | 781, 860, 1213, 1994, 2092, 2932, 3019, 3823 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1305 |
| BsuI | GTATCC | 1 cut(s) | 1839 |
| BtgI | CCRYGG | 2 cut(s) | 3448, 3917 |
| BtsI | GCAGTG | 1 cut(s) | 1554 |
| BtsIMutI | CAGTG | 8 cut(s) | 562, 791, 1188, 1554, 2733, 3465, 4011, 4170 |
| BveI | ACCTGC | 2 cut(s) | 1714, 3768 |
| Cac8I | GCNNGC | 9 cut(s) | 1407, 1427, 1519, 1760, 1936, 2312, 2355, 3293, 3374 |
| CaiI | CAGNNNCTG | 2 cut(s) | 350, 3886 |
| CciI | TCATGA | 2 cut(s) | 2220, 3229 |
| CfoI | GCGC | 4 cut(s) | 260, 2949, 3300, 3714 |
| Cfr10I | RCCGGY | 4 cut(s) | 151, 235, 1128, 3372 |
| Cfr9I | CCCGGG | 2 cut(s) | 2072, 3622 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 252, 287, 3720, 3755 |
| DraI | TTTAAA | 1 cut(s) | 45 |
| DriI | GACNNNNNGTC | 4 cut(s) | 1384, 1476, 1563, 2075 |
| EaeI | YGGCCR | 4 cut(s) | 207, 3370, 4082, 4200 |
| Eam1104I | CTCTTC | 4 cut(s) | 2103, 2911, 3399, 3692 |
| Eam1105I | GACNNNNNGTC | 4 cut(s) | 1384, 1476, 1563, 2075 |
| EarI | CTCTTC | 4 cut(s) | 2103, 2911, 3399, 3692 |
| EciI | GGCGGA | 1 cut(s) | 3198 |
| Ecl136II | GAGCTC | 2 cut(s) | 3409, 4006 |
| Eco130I | CCWWGG | 5 cut(s) | 221, 2080, 2936, 3448, 3917 |
| Eco147I | AGGCCT | 2 cut(s) | 40, 2310 |
| Eco24I | GRGCYC | 4 cut(s) | 75, 221, 3411, 4008 |
| Eco31I | GGTCTC | 1 cut(s) | 1585 |
| Eco47I | GGWCC | 4 cut(s) | 1478, 1726, 1903, 2077 |
| Eco47III | AGCGCT | 1 cut(s) | 259 |
| Eco53kI | GAGCTC | 2 cut(s) | 3409, 4006 |
| Eco57I | CTGAAG | 5 cut(s) | 891, 1589, 2395, 2592, 3501 |
| Eco81I | CCTNAGG | 1 cut(s) | 1305 |
| Eco88I | CYCGRG | 2 cut(s) | 2072, 3622 |
| EcoICRI | GAGCTC | 2 cut(s) | 3409, 4006 |
| EcoNI | CCTNNNNNAGG | 3 cut(s) | 1164, 1979, 3866 |
| EcoO109I | RGGNCCY | 3 cut(s) | 217, 218, 1726 |
| EcoRI | GAATTC | 3 cut(s) | 1054, 2140, 2630 |
| EcoRII | CCWGG | 7 cut(s) | 145, 1101, 1369, 1673, 2211, 2334, 2898 |
| EcoT14I | CCWWGG | 5 cut(s) | 221, 2080, 2936, 3448, 3917 |
| EcoT22I | ATGCAT | 2 cut(s) | 2613, 2719 |
| EcoT38I | GRGCYC | 4 cut(s) | 75, 221, 3411, 4008 |
| ErhI | CCWWGG | 5 cut(s) | 221, 2080, 2936, 3448, 3917 |
| Esp3I | CGTCTC | 1 cut(s) | 1917 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1027, 1059 |
| FaqI | GGGAC | 7 cut(s) | 1160, 1483, 1712, 1889, 2684, 3922, 4046 |
| FauI | CCCGC | 2 cut(s) | 83, 157 |
| FauNDI | CATATG | 4 cut(s) | 1554, 1785, 3250, 4027 |
| FbaI | TGATCA | 6 cut(s) | 10, 484, 547, 2188, 2494, 3150 |
| FblI | GTMKAC | 1 cut(s) | 3444 |
| FriOI | GRGCYC | 4 cut(s) | 75, 221, 3411, 4008 |
| FspBI | CTAG | 5 cut(s) | 222, 716, 2315, 2475, 2579 |
| GlaI | GCGC | 4 cut(s) | 259, 2948, 3299, 3713 |
| GsaI | CCCAGC | 3 cut(s) | 102, 360, 2240 |
| GsuI | CTGGAG | 7 cut(s) | 372, 849, 2011, 2325, 2517, 2616, 4035 |
| HaeII | RGCGCY | 1 cut(s) | 261 |
| HhaI | GCGC | 4 cut(s) | 260, 2949, 3300, 3714 |
| Hin1I | GRCGYC | 1 cut(s) | 3312 |
| Hin6I | GCGC | 4 cut(s) | 258, 2947, 3298, 3712 |
| HinP1I | GCGC | 4 cut(s) | 258, 2947, 3298, 3712 |
| HincII | GTYRAC | 4 cut(s) | 1417, 1919, 2272, 3080 |
| HindII | GTYRAC | 4 cut(s) | 1417, 1919, 2272, 3080 |
| HindIII | AAGCTT | 1 cut(s) | 1407 |
| HpaI | GTTAAC | 2 cut(s) | 1417, 2272 |
| HphI | GGTGA | 7 cut(s) | 208, 494, 1451, 1725, 2451, 3863, 3883 |
| Hpy166II | GTNNAC | 8 cut(s) | 703, 1389, 1417, 1919, 2272, 3080, 3445, 3781 |
| Hpy8I | GTNNAC | 8 cut(s) | 703, 1389, 1417, 1919, 2272, 3080, 3445, 3781 |
| Hpy99I | CGWCG | 1 cut(s) | 779 |
| HpyCH4III | ACNGT | 9 cut(s) | 287, 1246, 1327, 1339, 2244, 2737, 3442, 3643, 3999 |
| HpyCH4IV | ACGT | 3 cut(s) | 3312, 3718, 4192 |
| HpySE526I | ACGT | 3 cut(s) | 3312, 3718, 4192 |
| Hsp92I | GRCGYC | 1 cut(s) | 3312 |
| HspAI | GCGC | 4 cut(s) | 258, 2947, 3298, 3712 |
| Kpn2I | TCCGGA | 1 cut(s) | 2326 |
| KpnI | GGTACC | 3 cut(s) | 2297, 2822, 3441 |
| KroI | GCCGGC | 1 cut(s) | 3372 |
| KroNI | GCCGGC | 1 cut(s) | 3374 |
| Ksp22I | TGATCA | 6 cut(s) | 10, 484, 547, 2188, 2494, 3150 |
| KspAI | GTTAAC | 2 cut(s) | 1417, 2272 |
| LguI | GCTCTTC | 1 cut(s) | 3399 |
| LmnI | GCTCC | 8 cut(s) | 70, 353, 774, 1099, 2027, 3526, 4003, 4011 |
| MaeI | CTAG | 5 cut(s) | 222, 716, 2315, 2475, 2579 |
| MaeII | ACGT | 3 cut(s) | 3312, 3718, 4192 |
| MbiI | CCGCTC | 1 cut(s) | 3529 |
| MfeI | CAATTG | 2 cut(s) | 264, 2990 |
| MflI | RGATCY | 8 cut(s) | 781, 860, 1213, 1994, 2092, 2932, 3019, 3823 |
| MhlI | GDGCHC | 6 cut(s) | 75, 221, 3411, 3467, 3783, 4008 |
| MlsI | TGGCCA | 1 cut(s) | 209 |
| MluNI | TGGCCA | 1 cut(s) | 209 |
| MlyI | GAGTC | 8 cut(s) | 1573, 1624, 2354, 2607, 2706, 2897, 3251, 3709 |
| MmeI | TCCRAC | 5 cut(s) | 643, 1830, 1866, 2388, 2591 |
| Mox20I | TGGCCA | 1 cut(s) | 209 |
| Mph1103I | ATGCAT | 2 cut(s) | 2613, 2719 |
| MroI | TCCGGA | 1 cut(s) | 2326 |
| MroNI | GCCGGC | 1 cut(s) | 3372 |
| MscI | TGGCCA | 1 cut(s) | 209 |
| MslI | CAYNNNNRTG | 9 cut(s) | 249, 954, 1262, 1647, 2118, 2656, 3585, 3916, 4044 |
| Msp20I | TGGCCA | 1 cut(s) | 209 |
| MspA1I | CMGCKG | 3 cut(s) | 98, 350, 1694 |
| MunI | CAATTG | 2 cut(s) | 264, 2990 |
| Mva1269I | GAATGC | 2 cut(s) | 2113, 2336 |
| MvaI | CCWGG | 7 cut(s) | 147, 1103, 1371, 1675, 2213, 2336, 2900 |
| NaeI | GCCGGC | 1 cut(s) | 3374 |
| NciI | CCSGG | 7 cut(s) | 249, 1901, 2073, 2074, 3090, 3623, 3624 |
| NcoI | CCATGG | 2 cut(s) | 3448, 3917 |
| NdeI | CATATG | 4 cut(s) | 1554, 1785, 3250, 4027 |
| NgoMIV | GCCGGC | 1 cut(s) | 3372 |
| NmuCI | GTSAC | 4 cut(s) | 196, 2457, 3395, 3797 |
| NsiI | ATGCAT | 2 cut(s) | 2613, 2719 |
| NspI | RCATGY | 1 cut(s) | 3295 |
| NspV | TTCGAA | 1 cut(s) | 377 |
| OliI | CACNNNNGTG | 1 cut(s) | 4044 |
| PaeI | GCATGC | 1 cut(s) | 3295 |
| PagI | TCATGA | 2 cut(s) | 2220, 3229 |
| PasI | CCCWGGG | 2 cut(s) | 146, 1674 |
| PceI | AGGCCT | 2 cut(s) | 40, 2310 |
| PciSI | GCTCTTC | 1 cut(s) | 3399 |
| PctI | GAATGC | 2 cut(s) | 2113, 2336 |
| PdiI | GCCGGC | 1 cut(s) | 3374 |
| PflFI | GACNNNGTC | 1 cut(s) | 1901 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 644, 2303 |
| PfoI | TCCNGGA | 1 cut(s) | 2898 |
| PleI | GAGTC | 8 cut(s) | 1572, 1624, 2353, 2606, 2705, 2897, 3250, 3708 |
| PpsI | GAGTC | 8 cut(s) | 1572, 1624, 2353, 2606, 2705, 2897, 3250, 3708 |
| Ppu21I | YACGTR | 1 cut(s) | 4193 |
| PpuMI | RGGWCCY | 1 cut(s) | 1726 |
| PshBI | ATTAAT | 1 cut(s) | 1260 |
| Psp124BI | GAGCTC | 2 cut(s) | 3411, 4008 |
| Psp5II | RGGWCCY | 1 cut(s) | 1726 |
| Psp6I | CCWGG | 7 cut(s) | 145, 1101, 1369, 1673, 2211, 2334, 2898 |
| PspFI | CCCAGC | 3 cut(s) | 98, 356, 2236 |
| PspGI | CCWGG | 7 cut(s) | 145, 1101, 1369, 1673, 2211, 2334, 2898 |
| PspOMI | GGGCCC | 1 cut(s) | 217 |
| PspPPI | RGGWCCY | 1 cut(s) | 1726 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 3421, 3453 |
| PstI | CTGCAG | 4 cut(s) | 346, 1228, 1549, 3381 |
| PstNI | CAGNNNCTG | 2 cut(s) | 350, 3886 |
| PsuI | RGATCY | 8 cut(s) | 781, 860, 1213, 1994, 2092, 2932, 3019, 3823 |
| PsyI | GACNNNGTC | 1 cut(s) | 1901 |
| PvuII | CAGCTG | 3 cut(s) | 98, 350, 1694 |
| RseI | CAYNNNNRTG | 9 cut(s) | 249, 954, 1262, 1647, 2118, 2656, 3585, 3916, 4044 |
| SacI | GAGCTC | 2 cut(s) | 3411, 4008 |
| SapI | GCTCTTC | 1 cut(s) | 3399 |
| ScaI | AGTACT | 1 cut(s) | 2577 |
| SchI | GAGTC | 8 cut(s) | 1573, 1624, 2354, 2607, 2706, 2897, 3251, 3709 |
| SduI | GDGCHC | 6 cut(s) | 75, 221, 3411, 3467, 3783, 4008 |
| SfcI | CTRYAG | 6 cut(s) | 93, 342, 1224, 1242, 1545, 3377 |
| SfuI | TTCGAA | 1 cut(s) | 377 |
| SinI | GGWCC | 4 cut(s) | 1478, 1726, 1903, 2077 |
| SmaI | CCCGGG | 2 cut(s) | 2074, 3624 |
| SmiMI | CAYNNNNRTG | 9 cut(s) | 249, 954, 1262, 1647, 2118, 2656, 3585, 3916, 4044 |
| SmlI | CTYRAG | 2 cut(s) | 120, 2797 |
| SmoI | CTYRAG | 2 cut(s) | 120, 2797 |
| SphI | GCATGC | 1 cut(s) | 3295 |
| SseBI | AGGCCT | 2 cut(s) | 40, 2310 |
| SspMI | CTAG | 5 cut(s) | 222, 716, 2315, 2475, 2579 |
| SstI | GAGCTC | 2 cut(s) | 3411, 4008 |
| StuI | AGGCCT | 2 cut(s) | 40, 2310 |
| StyI | CCWWGG | 5 cut(s) | 221, 2080, 2936, 3448, 3917 |
| TaaI | ACNGT | 9 cut(s) | 287, 1246, 1327, 1339, 2244, 2737, 3442, 3643, 3999 |
| TaiI | ACGT | 3 cut(s) | 3315, 3721, 4195 |
| TaqI | TCGA | 4 cut(s) | 377, 1172, 1633, 3820 |
| TatI | WGTACW | 5 cut(s) | 1909, 2575, 3008, 3610, 4222 |
| TauI | GCSGC | 2 cut(s) | 4084, 4205 |
| TscAI | CASTG | 8 cut(s) | 562, 798, 1195, 1554, 2740, 3472, 4018, 4177 |
| TseFI | GTSAC | 4 cut(s) | 196, 2457, 3395, 3797 |
| Tsp45I | GTSAC | 4 cut(s) | 196, 2457, 3395, 3797 |
| TspGWI | ACGGA | 4 cut(s) | 568, 1007, 1493, 1941 |
| TspMI | CCCGGG | 2 cut(s) | 2072, 3622 |
| TspRI | CASTG | 8 cut(s) | 562, 798, 1195, 1554, 2740, 3472, 4018, 4177 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1901 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 644, 2303 |
| VneI | GTGCAC | 1 cut(s) | 3779 |
| VpaK11BI | GGWCC | 4 cut(s) | 1478, 1726, 1903, 2077 |
| VspI | ATTAAT | 1 cut(s) | 1260 |
| XagI | CCTNNNNNAGG | 3 cut(s) | 1164, 1979, 3866 |
| XapI | RAATTY | 6 cut(s) | 16, 1054, 2140, 2369, 2630, 2941 |
| XceI | RCATGY | 1 cut(s) | 3295 |
| XmaI | CCCGGG | 2 cut(s) | 2072, 3622 |
| XmaJI | CCTAGG | 1 cut(s) | 221 |
| XmiI | GTMKAC | 1 cut(s) | 3444 |
| XspI | CTAG | 5 cut(s) | 222, 716, 2315, 2475, 2579 |
| ZraI | GACGTC | 1 cut(s) | 3313 |
| ZrmI | AGTACT | 1 cut(s) | 2577 |
| Zsp2I | ATGCAT | 2 cut(s) | 2613, 2719 |