Prupe.7G254900_v2.0.a1

PB1 domain

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Reverse (-)
21412825 .. 21419707
6883 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G254900.10

Sequence Viewer

Length: 4413 bp
ATGGCGTTTGATCAAAATTCGTTTCCCAAAGAGTTAAGACCGTTAAACGTAGCTCGAACTGTGGCTGATGAGCCCCGCATTGCGCTCGCTACTGCAACTGGACGAAACCCAGATGGACTTTTCCCCAACCTGGCTCTTGAAGTTAATAGCCCTAATTCGATACCTGTCTTTTACCCATCAACGGTCGCGGAGGCTGGGCTTGTTGGCGTAGGGTATGGAAATGCCATGTCTGGGGTGCCCACATGGCGCCCTCGCATCCCTGTGCCGGTGGGGCATCCAGGGATGAACACTGCCGTTGCTGTTGGAATTGGTTACAGTCCTAATTTGGGCGGTCGGCTTGGCGGCAATGCTGTTGATCTTGTAAGCTCTTCTACTACAACAACTGCTTCTGGGCCTTCTGTCTGTAATTTTAATATGTCTAATAGGGTTGTAGGCAATGGTTTGGATCATGGTGTTAATGATATGGCAGTTAGATTTGGTTATAATCCCAATTTGGGAAATAAGGTCAGTGGTAATGTTGCTAATCAAACTGGGAATGATTTGACATCTGGGTATGGTAATAATGCCAATTTTGGCAATCGGGTTGGTGGCAATGGAACTGATCAAGCAAGCGACGATGGTGGAGATGATTCTGTGTCAGGGAAGAAAGTCAAGCTTCTGTGCAGCTTTGGGGGAAAGATTTTGCCCAGACCAAGTGATGGAATGTTGAGATACGTTGGAGGGCAGACAAGGATTATTAGTGTTCGGAGAGATGTGAGCTTCAGTGAGCTAGTGCAGAAGATGTTGGATACATATGGGCAACCTGTGGTTATTAAATATCAGCTCCCTGATGAGGATCTCGATGCACTGGTGTCAGTTTCATGTGTTGATGATCTTGACAATATGAAGGATGAGTATGGGAAGTTGGTTGAGCGATCTCCAGATGGGTCCGCAAAACTGAGGGTGTTTTTGTTTTCTGCTTCAGAAGTTGATCCATCTAGTGCTGTACAATTCGGGGATTTACATAATAGTGAGCAAAGATATGTTGATGCTGTCAATGGGATTATGGATGGGGTCGGTGGTGGTATCATGAGGAAGGAGAGTATGACAAGTGCTACTTCAACACAGAATTCTGATTTTAGCGGAACTGATATTGTTGATAGCTCAATTCCTGGTCAGGGTGACACTACTGGACCTCCATCAGCAGGCAAATTATCACCTAAAGGGGATTCAGCTACTTCTCATGATAATAGTACAAGATTGGTAATTGTGGATCCTAACCCTGCAGTTTATTCTGAAGTTTCTACAGTTCCATTGGGCATTCCTGTGGTTAAGTCTGCGCCTCCCCAAACATCACCTTCTCAGCCTGAGTGTGAGTTAGAAAGGTCTGTTCCTGTTACAGTATCGCAGCAGCAAGTGGGGTTGCAGCAACCTGGAATTGGCATTCCATCCACTGCTCCTTATCTGCAAACTTATGTTGGTCCTCGCCAAGAAGTTATGAACCGAGCAGATCATCTCCAGCTTCCTCCTCAGATGGGTTTCCCAAATGCTCACCTATTGGGGACTGCTAGTCCTGTATATACCCAACAGCAATTCTGTGATAGTGTTGCTGGCATCACCCAACATCACTTCATTCCTGCAGTGCACATGACAATGACTCCCTCATCTTCTCATGTTAATATAAGACCAAATGTGCTTCAGCCATTGATGCAACCCCAGCAGACTCGATTAGATCATTATGTAGATGAGAGCACCTTTGTTCCCAGGGTAGTCCAGTTTCCTACTGAGCAAAGCTATAATTCCTATCAGGTTCAGGTCCCATCACCAGTGGTAGGAGGTGCTTATGGCTGGCATCAGGTTCCACCACCAGAGCATGTGATTTTTCATGATGGTTTGGTATCCCACCAACAGGTAATGTATCCTGAGAAATCCCAAAGGTTGGAGGACTGTTATATGTGTCAGAGAGCATTGCCTCATGCTCATTCTGATACTTTGGTACAGGTTCATAGAGACAGTGGTGGAAGCCCAGTATCTGATTCAAATTCAACTTATCATAGTCCCCGCCTGGAGGACAATTTGCGAGCTCAACCAATGAACATGGTTATGGTAAGTGGAGCATTAGCAGAAGGTAATTTTGGGCAAGGAGTTGAGGCTCGACTTAGGGTCCAAGGTCAAGTAGATCCTCTTGTTGGAACATCTCATTCAGAGGTGACTGGGATCTCGCAGATTTCTGAGGGAACTCGTGAAAATGAGACAATGAATCTTCAACAAGTTGATCTTCCAATGATTTCAGCTCCCCATGGTGTTATCAGGAGAGGGGGTGACGTACAGTCACCAAATAGCACATTCATGGTGGCTATTCCTCAGCGCTGTCAAGATGATGCTGTTCAACAACATTCTGCGCCATTCCAGTACCAGGTTAAACAGGAAAATTTAGTTAATGATCCTTTTAATCAAGATGTACCTCTTGTTGGGGGCACACCTGTTCAAACTTCAGAATATCTGGTTCATGAATGTCCAACTGCATACCCCAACAAATTTCCTGGAGTTATTCCAAAAGAAGACAATGTAGACACTTGCATTGCATATGATCATCTGAGACAAATCGACGGGAGAATGGAGACCCTCAGGATAAGCCCCACTGAGGTTTATGTTAATAATGAGCATGGGAAGTCACCCATTGATACGCCTAGAGTGGAAGACAGCTTTGACCATAAAGCACCACAAGTTGGGGGTAGGGAGGTGACTCTAGATAACACTGTTGGCAGGAGTCACTTTAAACCAACCGAAGTAGTGGCTTCTTCCCCTGCTGAAGTCTCACATGGGTATAATTCGCAGCCTGTAGAATTCTTTGAGGCGGTACAGCCATCTATGTGGGGAAATCCTGAATCTTACCCACAATCAAGAGTTGGATTCCATCCTCAGGATGCTTATGAATTTAATTATGGCAACCCTGTTGTTTCTACCCATATAACTAATGGAATTCAACCTCCTGCTGAATGGAAGGATGAGAACTTAAGATTGCAGCCCAAGATGGTACCTAATGATGTGGACGGTGTTACCTCAAATGATGCTGTTCCCCAGGACTCCTCAAACTCACTGTTCAGCAATCAGGATCCTTGGAGTTTGAGCCACGATACTCATTTGCCTCCTAAACCAACCAAAATACAATTGAGAAAAGAACCATTTACAGAATTGCGAATGGATGATGGGGGTCAGCAGTCACTGGGCAATTTGAACAGGGATCTTAGTTCAGAGCCTGCCCAGTCTTCCAAAGGATCAGCCGAGGAACAAATAAAGCAAGAACTTCAAGCTGTTGCTGAGGGAGTAGCTGCCTGTGTTTTTCAGTCATCTTCGCCGTCAAATCCTGACTTACGTGATAAAGATGAGTATGCTTATCAATCCAATCAAGATGAAGATGTTCAAAACAATACTGCAGGCATGCAAAACAGAGCGAAAGTTGAGGATGTCAAGACCAAATTCAGAGATAAGGCAAATATTGGTTTTCCAGTATCAGATAGCCGAGGCCGATTGCAGATTATAAAGAACAGTGACCTTGAAGAGCGAAGAGAATTGGGTTCTGGAACCTTTGGTACTGTTTATCATGGGAAATGGAGGGGCACTGATGTTGCAATTAAAAGAATAAATGATAGGTGTTTTGCTGGGAAGCCTTCAGAACAAGAGCGCATGAGAGAAGATTTCTGGAATGAGGCCATCAAACTTGCTGACTTGCACCACCCTAATGTGGTAGCTTTCTATGGCGTTGTGCTTGATGGGCCGGGAGGTTCAGTGGCAACAGTGACAGAGTATATGATTAATGGCTCTCTGAGAAATGCCTTGCAGAAGAATGAGAACAGGACTCTGGACAAGCGCAAGCGTCTCTTGATTGCAATGGATGTGGCATTTGGGATGGAGTACCTGCATGAAAAGAATATAGTACACTTTGATTTGAAAAGTGACAACTTACTTGTCAATCTTCGAGATCCACACCGCCCAATATGCAAGGTTGGTGACTTGGGGCTATCTAAAGTGAAATGTCATACACTGATCTCCGGTGGTGTGCGGGGAACACTTCCATGGATGGCACCAGAACTGTTGAATGGTGGCAGTAGCCTTGTTTCTGAGAAGGTAGATGTGTTTTCTTTTGGTATTGTGTTGTGGGAGCTCCTCACCGGAGATGAACCATATGCAGATTTGCACTACGGTGCTATCATAGGAGGTATTGTGAGCAATACATTGCGGCCACCAGTCCCGGACTCTTGTGATCCAGAATGGAAATCACTGATGGAGAGATGCTGGTCTTCGGAGCCAACTGAGAGGCTGAACTTCACTGAAATTGCAAACGAATTACGTGCTATGACCGCAAAGATTCCTCCTAAAGGACAAAGCCAACCGCAGCAACCCCCTTCTACACAGCCTCAGATTCAAAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001666 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004712 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006082 GO:0006464 GO:0006468 GO:0006629 GO:0006720 GO:0006721 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009628 GO:0009685 GO:0009686 GO:0009719 GO:0009723 GO:0009725 GO:0009743 GO:0009744 GO:0009746 GO:0009750 GO:0009756 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0010104 GO:0010105 GO:0010182 GO:0010646 GO:0010648 GO:0010817 GO:0012505 GO:0016020 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019752 GO:0023051 GO:0023052 GO:0023057 GO:0031984 GO:0034284 GO:0034285 GO:0036211 GO:0036293 GO:0040034 GO:0042175 GO:0042221 GO:0042445 GO:0042446 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046777 GO:0048506 GO:0048509 GO:0048510 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051302 GO:0051716 GO:0065007 GO:0065008 GO:0070297 GO:0070298 GO:0070482 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071310 GO:0071322 GO:0071704 GO:0098827 GO:0140096 GO:1901564 GO:1901576 GO:1901700 GO:1901701 GO:1902531 GO:1902532 GO:2000026 GO:2000035 GO:2000069 GO:2000280
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1471

Amino Acids

160.23

Weight (kDa)

5.29

Isoelectric Point (pI)

46.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 483, 3521
Acc36I ACCTGC 1 cut(s) 3906
Acc65I GGTACC 1 cut(s) 3016
AccB1I GGYRCC 4 cut(s) 235, 246, 3016, 4063
AccB7I CCANNNNNTGG 3 cut(s) 698, 1918, 2708
AccI GTMKAC 1 cut(s) 2550
AccII CGCG 1 cut(s) 188
AcoI YGGCCR 1 cut(s) 4220
AcsI RAATTY 9 cut(s) 16, 1108, 2020, 2410, 2516, 2825, 2915, 2961, 3458
AcuI CTGAAG 7 cut(s) 745, 945, 1296, 1661, 2457, 2811, 3636
AcyI GRCGYC 1 cut(s) 247
AfeI AGCGCT 1 cut(s) 2348
AflII CTTAAG 1 cut(s) 2995
AhdI GACNNNNNGTC 3 cut(s) 1548, 2141, 2308
AjnI CCWGG 9 cut(s) 129, 277, 1150, 1411, 1742, 2043, 2394, 2521, 3060
AjuI GAANNNNNNNTTGG 2 cut(s) 2097, 2129
AleI CACNNNNGTG 1 cut(s) 4182
Alw21I GWGCWC 4 cut(s) 1626, 1733, 2065, 4146
Alw26I GTCTC 6 cut(s) 1983, 2225, 2572, 2594, 2800, 3863
Alw44I GTGCAC 1 cut(s) 1622
AlwNI CAGNNNCTG 3 cut(s) 2012, 3205, 3239
Aor51HI AGCGCT 1 cut(s) 2348
AoxI GGCC 5 cut(s) 392, 3505, 3690, 3755, 4220
ApaLI GTGCAC 1 cut(s) 1622
ApeKI GCWGC 8 cut(s) 663, 1387, 1390, 1405, 2815, 3004, 3311, 4375
ApoI RAATTY 9 cut(s) 16, 1108, 2020, 2410, 2516, 2825, 2915, 2961, 3458
AseI ATTAAT 1 cut(s) 3795
Asp700I GAANNNNTTC 1 cut(s) 3399
Asp718I GGTACC 1 cut(s) 3016
AspLEI GCGC 7 cut(s) 85, 249, 1321, 2349, 2383, 3666, 3852
AspS9I GGNCC 7 cut(s) 392, 927, 1172, 1460, 1795, 2143, 3755
AsuC2I CCSGG 2 cut(s) 3759, 4232
AvaII GGWCC 5 cut(s) 927, 1172, 1460, 1795, 2143
AxyI CCTNAGG 2 cut(s) 2606, 2901
BaeGI GKGCMC 4 cut(s) 240, 1626, 2459, 3602
BaeI ACNNNNGTAYC 2 cut(s) 1959, 1992
BamHI GGATCC 2 cut(s) 1252, 3094
BanI GGYRCC 4 cut(s) 235, 246, 3016, 4063
BanII GRGCYC 3 cut(s) 75, 2065, 4146
BauI CACGAG 1 cut(s) 2220
BbsI GAAGAC 4 cut(s) 2547, 2685, 3240, 4272
Bbv12I GWGCWC 4 cut(s) 1626, 1733, 2065, 4146
BbvCI CCTCAGC 2 cut(s) 2343, 3300
BbvI GCAGC 8 cut(s) 675, 1399, 1402, 1417, 2827, 3016, 3298, 4387
BceAI ACGGC 2 cut(s) 278, 3322
BcgI CGANNNNNNTGC 4 cut(s) 67, 101, 4313, 4347
BciT130I CCWGG 9 cut(s) 131, 279, 1152, 1413, 1744, 2045, 2396, 2523, 3062
BciVI GTATCC 3 cut(s) 781, 1888, 1908
BclI TGATCA 3 cut(s) 10, 601, 2569
BcnI CCSGG 2 cut(s) 3759, 4232
BcoDI GTCTC 6 cut(s) 1983, 2225, 2572, 2594, 2800, 3863
BfaI CTAG 5 cut(s) 770, 978, 1548, 2670, 2729
BfmI CTRYAG 5 cut(s) 1263, 1284, 1617, 2820, 3414
BfoI RGCGCY 2 cut(s) 250, 2350
BfrI CTTAAG 1 cut(s) 2995
BfuAI ACCTGC 1 cut(s) 3906
BfuI GTATCC 3 cut(s) 781, 1888, 1908
BglI GCCNNNNNGGC 2 cut(s) 244, 271
Bme18I GGWCC 5 cut(s) 927, 1172, 1460, 1795, 2143
BmeRI GACNNNNNGTC 3 cut(s) 1548, 2141, 2308
BmgT120I GGNCC 7 cut(s) 392, 927, 1172, 1460, 1795, 2143, 3755
BmrI ACTGGG 5 cut(s) 540, 2000, 2202, 3215, 3238
BmuI ACTGGG 5 cut(s) 540, 2000, 2202, 3215, 3238
BpiI GAAGAC 4 cut(s) 2547, 2685, 3240, 4272
BpmI CTGGAG 4 cut(s) 903, 1481, 2066, 2544
Bpu10I CCTNAGC 2 cut(s) 2343, 3300
BpuMI CCSGG 2 cut(s) 3759, 4232
BsaAI YACGTR 2 cut(s) 3356, 4331
BsaBI GATNNNNATC 1 cut(s) 834
BsaHI GRCGYC 1 cut(s) 247
BsaI GGTCTC 1 cut(s) 2594
BsaWI WCCGGW 2 cut(s) 4031, 4151
Bse118I RCCGGY 1 cut(s) 265
Bse21I CCTNAGG 2 cut(s) 2606, 2901
Bse3DI GCAATG 8 cut(s) 78, 352, 442, 598, 1946, 2559, 3876, 4214
Bse8I GATNNNNATC 1 cut(s) 834
BseBI CCWGG 9 cut(s) 131, 279, 1152, 1413, 1744, 2045, 2396, 2523, 3062
BseJI GATNNNNATC 1 cut(s) 834
BseMI GCAATG 8 cut(s) 78, 352, 442, 598, 1946, 2559, 3876, 4214
BseRI GAGGAG 3 cut(s) 1497, 3058, 4136
BseSI GKGCMC 4 cut(s) 240, 1626, 2459, 3602
BseXI GCAGC 8 cut(s) 675, 1399, 1402, 1417, 2827, 3016, 3298, 4387
BseYI CCCAGC 3 cut(s) 194, 1695, 3641
BsgI GTGCAG 2 cut(s) 682, 794
Bsh1236I CGCG 1 cut(s) 188
Bsh1285I CGRYCG 2 cut(s) 186, 334
BshFI GGCC 5 cut(s) 394, 3507, 3692, 3757, 4222
BshNI GGYRCC 4 cut(s) 235, 246, 3016, 4063
BsiEI CGRYCG 2 cut(s) 186, 334
BsiHKAI GWGCWC 4 cut(s) 1626, 1733, 2065, 4146
BsiSI CCGG 5 cut(s) 266, 3758, 4032, 4152, 4232
BslFI GGGAC 4 cut(s) 1555, 1781, 2022, 4214
BsmAI GTCTC 6 cut(s) 1983, 2225, 2572, 2594, 2800, 3863
BsmBI CGTCTC 1 cut(s) 3863
BsmFI GGGAC 4 cut(s) 1555, 1781, 2022, 4214
BsmI GAATGC 2 cut(s) 1299, 1422
BsnI GGCC 5 cut(s) 394, 3507, 3692, 3757, 4222
Bso31I GGTCTC 1 cut(s) 2594
Bsp1286I GDGCHC 8 cut(s) 75, 240, 1626, 1733, 2065, 2459, 3602, 4146
Bsp1407I TGTACA 1 cut(s) 985
Bsp19I CCATGG 2 cut(s) 2278, 4055
BspANI GGCC 5 cut(s) 394, 3507, 3692, 3757, 4222
BspFNI CGCG 1 cut(s) 188
BspHI TCATGA 4 cut(s) 1068, 1222, 1864, 2488
BspMAI CTGCAG 3 cut(s) 1267, 1621, 3418
BspMI ACCTGC 1 cut(s) 3906
BspQI GCTCTTC 2 cut(s) 373, 3534
BspT107I GGYRCC 4 cut(s) 235, 246, 3016, 4063
BspTI CTTAAG 1 cut(s) 2995
BspTNI GGTCTC 1 cut(s) 2594
BsrDI GCAATG 8 cut(s) 78, 352, 442, 598, 1946, 2559, 3876, 4214
BsrFI RCCGGY 1 cut(s) 265
BsrGI TGTACA 1 cut(s) 985
BssAI RCCGGY 1 cut(s) 265
BssNI GRCGYC 1 cut(s) 247
BssSI CACGAG 1 cut(s) 2220
BssT1I CCWWGG 4 cut(s) 2146, 2278, 3098, 4055
Bst2BI CACGAG 1 cut(s) 2220
Bst2UI CCWGG 9 cut(s) 131, 279, 1152, 1413, 1744, 2045, 2396, 2523, 3062
Bst6I CTCTTC 3 cut(s) 373, 3534, 3541
BstACI GRCGYC 1 cut(s) 247
BstAFI CTTAAG 1 cut(s) 2995
BstAUI TGTACA 1 cut(s) 985
BstBAI YACGTR 2 cut(s) 3356, 4331
BstDSI CCRYGG 2 cut(s) 2278, 4055
BstENI CCTNNNNNAGG 1 cut(s) 4356
BstFNI CGCG 1 cut(s) 188
BstH2I RGCGCY 2 cut(s) 250, 2350
BstHHI GCGC 7 cut(s) 85, 249, 1321, 2349, 2383, 3666, 3852
BstMAI GTCTC 6 cut(s) 1983, 2225, 2572, 2594, 2800, 3863
BstMCI CGRYCG 2 cut(s) 186, 334
BstMWI GCNNNNNNNGC 7 cut(s) 244, 271, 1687, 1696, 3754, 3978, 4340
BstNI CCWGG 9 cut(s) 131, 279, 1152, 1413, 1744, 2045, 2396, 2523, 3062
BstNSI RCATGY 2 cut(s) 1856, 3424
BstSFI CTRYAG 5 cut(s) 1263, 1284, 1617, 2820, 3414
BstSLI GKGCMC 4 cut(s) 240, 1626, 2459, 3602
BstUI CGCG 1 cut(s) 188
BstV1I GCAGC 8 cut(s) 675, 1399, 1402, 1417, 2827, 3016, 3298, 4387
BstV2I GAAGAC 4 cut(s) 2547, 2685, 3240, 4272
BstX2I RGATCY 7 cut(s) 835, 1252, 2158, 2196, 3094, 3223, 3961
BstXI CCANNNNNNTGG 1 cut(s) 2853
BstYI RGATCY 7 cut(s) 835, 1252, 2158, 2196, 3094, 3223, 3961
Bsu36I CCTNAGG 2 cut(s) 2606, 2901
BsuI GTATCC 3 cut(s) 781, 1888, 1908
BsuRI GGCC 5 cut(s) 394, 3507, 3692, 3757, 4222
BtgI CCRYGG 2 cut(s) 2278, 4055
BtsI GCAGTG 3 cut(s) 288, 1431, 1626
BveI ACCTGC 1 cut(s) 3906
CaiI CAGNNNCTG 3 cut(s) 2012, 3205, 3239
CciI TCATGA 4 cut(s) 1068, 1222, 1864, 2488
CfoI GCGC 7 cut(s) 85, 249, 1321, 2349, 2383, 3666, 3852
Cfr10I RCCGGY 1 cut(s) 265
Cfr13I GGNCC 7 cut(s) 392, 927, 1172, 1460, 1795, 2143, 3755
CseI GACGC 1 cut(s) 3845
CsiI ACCWGGT 1 cut(s) 2394
CspCI CAANNNNNGTGG 2 cut(s) 3858, 3893
DinI GGCGCC 1 cut(s) 248
DraI TTTAAA 1 cut(s) 2758
DriI GACNNNNNGTC 3 cut(s) 1548, 2141, 2308
EaeI YGGCCR 1 cut(s) 4220
Eam1104I CTCTTC 3 cut(s) 373, 3534, 3541
Eam1105I GACNNNNNGTC 3 cut(s) 1548, 2141, 2308
EarI CTCTTC 3 cut(s) 373, 3534, 3541
Ecl136II GAGCTC 2 cut(s) 2063, 4144
Eco130I CCWWGG 4 cut(s) 2146, 2278, 3098, 4055
Eco24I GRGCYC 3 cut(s) 75, 2065, 4146
Eco31I GGTCTC 1 cut(s) 2594
Eco47I GGWCC 5 cut(s) 927, 1172, 1460, 1795, 2143
Eco47III AGCGCT 1 cut(s) 2348
Eco53kI GAGCTC 2 cut(s) 2063, 4144
Eco57I CTGAAG 7 cut(s) 745, 945, 1296, 1661, 2457, 2811, 3636
Eco81I CCTNAGG 2 cut(s) 2606, 2901
EcoICRI GAGCTC 2 cut(s) 2063, 4144
EcoNI CCTNNNNNAGG 1 cut(s) 4356
EcoO109I RGGNCCY 1 cut(s) 1795
EcoRI GAATTC 3 cut(s) 1108, 2825, 2961
EcoRII CCWGG 9 cut(s) 129, 277, 1150, 1411, 1742, 2043, 2394, 2521, 3060
EcoT14I CCWWGG 4 cut(s) 2146, 2278, 3098, 4055
EcoT38I GRGCYC 3 cut(s) 75, 2065, 4146
EgeI GGCGCC 1 cut(s) 248
EheI GGCGCC 1 cut(s) 248
ErhI CCWWGG 4 cut(s) 2146, 2278, 3098, 4055
Esp3I CGTCTC 1 cut(s) 3863
FalI AAGNNNNNCTT 8 cut(s) 639, 671, 1081, 1113, 2241, 2273, 3845, 3877
FaqI GGGAC 4 cut(s) 1555, 1781, 2022, 4214
FauI CCCGC 3 cut(s) 83, 2048, 4035
FauNDI CATATG 3 cut(s) 793, 2566, 4165
FbaI TGATCA 3 cut(s) 10, 601, 2569
FblI GTMKAC 1 cut(s) 2550
FriOI GRGCYC 3 cut(s) 75, 2065, 4146
FspBI CTAG 5 cut(s) 770, 978, 1548, 2670, 2729
GlaI GCGC 7 cut(s) 84, 248, 1320, 2348, 2382, 3665, 3851
GsaI CCCAGC 3 cut(s) 198, 1699, 3645
GsuI CTGGAG 4 cut(s) 903, 1481, 2066, 2544
HaeII RGCGCY 2 cut(s) 250, 2350
HaeIII GGCC 5 cut(s) 394, 3507, 3692, 3757, 4222
HapII CCGG 5 cut(s) 266, 3758, 4032, 4152, 4232
HgaI GACGC 1 cut(s) 3845
HhaI GCGC 7 cut(s) 85, 249, 1321, 2349, 2383, 3666, 3852
Hin1I GRCGYC 1 cut(s) 247
Hin6I GCGC 7 cut(s) 83, 247, 1319, 2347, 2381, 3664, 3850
HinP1I GCGC 7 cut(s) 83, 247, 1319, 2347, 2381, 3664, 3850
HindIII AAGCTT 1 cut(s) 653
HpaII CCGG 5 cut(s) 266, 3758, 4032, 4152, 4232
Hpy166II GTNNAC 4 cut(s) 1624, 2551, 3031, 3919
Hpy8I GTNNAC 4 cut(s) 1624, 2551, 3031, 3919
Hpy99I CGWCG 2 cut(s) 617, 2591
HpyAV CCTTC 9 cut(s) 405, 880, 1069, 1347, 2099, 2977, 3660, 4099, 4395
HpyCH4IV ACGT 5 cut(s) 48, 714, 2304, 3355, 4330
HpyF10VI GCNNNNNNNGC 7 cut(s) 244, 271, 1687, 1696, 3754, 3978, 4340
HpySE526I ACGT 5 cut(s) 48, 714, 2304, 3355, 4330
Hsp92I GRCGYC 1 cut(s) 247
HspAI GCGC 7 cut(s) 83, 247, 1319, 2347, 2381, 3664, 3850
KasI GGCGCC 1 cut(s) 246
KpnI GGTACC 1 cut(s) 3020
Ksp22I TGATCA 3 cut(s) 10, 601, 2569
LguI GCTCTTC 2 cut(s) 373, 3534
LmnI GCTCC 7 cut(s) 828, 1441, 2093, 2278, 4141, 4149, 4285
Lsp1109I GCAGC 8 cut(s) 675, 1399, 1402, 1417, 2827, 3016, 3298, 4387
MabI ACCWGGT 1 cut(s) 2394
MaeI CTAG 5 cut(s) 770, 978, 1548, 2670, 2729
MaeII ACGT 5 cut(s) 48, 714, 2304, 3355, 4330
MfeI CAATTG 1 cut(s) 3149
MflI RGATCY 7 cut(s) 835, 1252, 2158, 2196, 3094, 3223, 3961
MhlI GDGCHC 8 cut(s) 75, 240, 1626, 1733, 2065, 2459, 3602, 4146
Mly113I GGCGCC 1 cut(s) 247
MlyI GAGTC 7 cut(s) 1630, 1696, 2719, 2758, 3059, 3832, 4229
MmeI TCCRAC 7 cut(s) 283, 697, 765, 1899, 2149, 2522, 2869
MroXI GAANNNNTTC 1 cut(s) 3399
MspCI CTTAAG 1 cut(s) 2995
MspI CCGG 5 cut(s) 266, 3758, 4032, 4152, 4232
MunI CAATTG 1 cut(s) 3149
Mva1269I GAATGC 2 cut(s) 1299, 1422
MvaI CCWGG 9 cut(s) 131, 279, 1152, 1413, 1744, 2045, 2396, 2523, 3062
MvnI CGCG 1 cut(s) 188
MwoI GCNNNNNNNGC 7 cut(s) 244, 271, 1687, 1696, 3754, 3978, 4340
NarI GGCGCC 1 cut(s) 247
NciI CCSGG 2 cut(s) 3759, 4232
NcoI CCATGG 2 cut(s) 2278, 4055
NdeI CATATG 3 cut(s) 793, 2566, 4165
NmeAIII GCCGAG 2 cut(s) 3289, 3527
NspI RCATGY 2 cut(s) 1856, 3424
OliI CACNNNNGTG 1 cut(s) 4182
PaeI GCATGC 1 cut(s) 3424
PagI TCATGA 4 cut(s) 1068, 1222, 1864, 2488
PasI CCCWGGG 1 cut(s) 1743
PciSI GCTCTTC 2 cut(s) 373, 3534
PctI GAATGC 2 cut(s) 1299, 1422
PdmI GAANNNNTTC 1 cut(s) 3399
PfeI GAWTC 8 cut(s) 629, 1208, 2015, 2239, 2867, 2892, 4348, 4402
PflMI CCANNNNNTGG 3 cut(s) 698, 1918, 2708
PfoI TCCNGGA 2 cut(s) 2521, 4230
PleI GAGTC 7 cut(s) 1630, 1696, 2719, 2757, 3059, 3832, 4229
PluTI GGCGCC 1 cut(s) 250
PpsI GAGTC 7 cut(s) 1630, 1696, 2719, 2757, 3059, 3832, 4229
Ppu21I YACGTR 2 cut(s) 3356, 4331
PpuMI RGGWCCY 1 cut(s) 1795
PshBI ATTAAT 1 cut(s) 3795
PsiI TTATAA 2 cut(s) 483, 3521
Psp124BI GAGCTC 2 cut(s) 2065, 4146
Psp5II RGGWCCY 1 cut(s) 1795
Psp6I CCWGG 9 cut(s) 129, 277, 1150, 1411, 1742, 2043, 2394, 2521, 3060
PspFI CCCAGC 3 cut(s) 194, 1695, 3641
PspGI CCWGG 9 cut(s) 129, 277, 1150, 1411, 1742, 2043, 2394, 2521, 3060
PspPI GGNCC 7 cut(s) 392, 927, 1172, 1460, 1795, 2143, 3755
PspPPI RGGWCCY 1 cut(s) 1795
PsrI GAACNNNNNNTAC 2 cut(s) 3556, 3588
PstI CTGCAG 3 cut(s) 1267, 1621, 3418
PstNI CAGNNNCTG 3 cut(s) 2012, 3205, 3239
PsuI RGATCY 7 cut(s) 835, 1252, 2158, 2196, 3094, 3223, 3961
SacI GAGCTC 2 cut(s) 2065, 4146
SapI GCTCTTC 2 cut(s) 373, 3534
Sau96I GGNCC 7 cut(s) 392, 927, 1172, 1460, 1795, 2143, 3755
SchI GAGTC 7 cut(s) 1630, 1696, 2719, 2758, 3059, 3832, 4229
SduI GDGCHC 8 cut(s) 75, 240, 1626, 1733, 2065, 2459, 3602, 4146
SexAI ACCWGGT 1 cut(s) 2394
SfcI CTRYAG 5 cut(s) 1263, 1284, 1617, 2820, 3414
SfoI GGCGCC 1 cut(s) 248
SinI GGWCC 5 cut(s) 927, 1172, 1460, 1795, 2143
SmlI CTYRAG 1 cut(s) 2995
SmoI CTYRAG 1 cut(s) 2995
SphI GCATGC 1 cut(s) 3424
SspDI GGCGCC 1 cut(s) 246
SspI AATATT 1 cut(s) 3478
SspMI CTAG 5 cut(s) 770, 978, 1548, 2670, 2729
SstI GAGCTC 2 cut(s) 2065, 4146
StyI CCWWGG 4 cut(s) 2146, 2278, 3098, 4055
TaiI ACGT 5 cut(s) 51, 717, 2307, 3358, 4333
TaqI TCGA 7 cut(s) 55, 158, 840, 1705, 2134, 2586, 3958
TatI WGTACW 3 cut(s) 985, 1232, 3916
TauI GCSGC 2 cut(s) 345, 4222
TfiI GAWTC 8 cut(s) 629, 1208, 2015, 2239, 2867, 2892, 4348, 4402
TseI GCWGC 8 cut(s) 663, 1387, 1390, 1405, 2815, 3004, 3311, 4375
Van91I CCANNNNNTGG 3 cut(s) 698, 1918, 2708
Vha464I CTTAAG 1 cut(s) 2995
VneI GTGCAC 1 cut(s) 1622
VpaK11BI GGWCC 5 cut(s) 927, 1172, 1460, 1795, 2143
VspI ATTAAT 1 cut(s) 3795
XagI CCTNNNNNAGG 1 cut(s) 4356
XapI RAATTY 9 cut(s) 16, 1108, 2020, 2410, 2516, 2825, 2915, 2961, 3458
XbaI TCTAGA 1 cut(s) 2728
XceI RCATGY 2 cut(s) 1856, 3424
XcmI CCANNNNNNNNNTGG 1 cut(s) 2954
XmiI GTMKAC 1 cut(s) 2550
XmnI GAANNNNTTC 1 cut(s) 3399
XspI CTAG 5 cut(s) 770, 978, 1548, 2670, 2729
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.