Domain in the N-terminus of transcription elongation factor S-II (and elsewhere)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G48050 AT3G48050 AT3G48060 AT3G48060 AT3G48060 |
| fragaria_vesca | FvH4_5g16640 FvH4_5g16640 FvH4_5g16640 FvH4_5g16640 |
| malus_domestica | MD06G1178400.v1.1 MD14G1184800.v1.1 |
| prunus_persica | Prupe.5G177500_v2.0.a1 Prupe.5G177500_v2.0.a1 |
| pyrus_communis | pycom06g15860 pycom14g15380 |
| rosa_chinensis | RchiOBHm_Chr7g0179511 |
| rosa_laevigata | RLG00000005348 |
| rosa_multiflora | Rmu_sc0000735.1_g000008 |
| rosa_roxburghii | Rroxscaffold_3G00273930 |
| rosa_rugosa | Rorug06G0424900 Rorug06G0424900 Rorug06G0425000.1 |
| rosa_samantha | Rh7AG024900 Rh7BG024100 Rh7CG025500 Rh7DG025300 |
| rosa_wichuraiana | Rw7G002000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 33, 3788 |
| Acc36I | ACCTGC | 2 cut(s) | 370, 3997 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 4025, 4310, 4589 |
| AccBSI | CCGCTC | 1 cut(s) | 22 |
| AccI | GTMKAC | 3 cut(s) | 528, 1059, 3016 |
| AccII | CGCG | 4 cut(s) | 1118, 1319, 2139, 4622 |
| AclI | AACGTT | 2 cut(s) | 724, 4391 |
| AcoI | YGGCCR | 1 cut(s) | 895 |
| AcuI | CTGAAG | 9 cut(s) | 849, 1418, 1530, 2634, 2765, 3348, 3612, 4353, 4805 |
| AcyI | GRCGYC | 1 cut(s) | 3476 |
| AdeI | CACNNNGTG | 1 cut(s) | 4118 |
| AfaI | GTAC | 9 cut(s) | 2494, 2506, 2967, 3212, 3322, 3777, 3838, 3870, 4340 |
| AfeI | AGCGCT | 1 cut(s) | 476 |
| AflII | CTTAAG | 1 cut(s) | 2150 |
| AflIII | ACRYGT | 2 cut(s) | 48, 2524 |
| AgeI | ACCGGT | 1 cut(s) | 1936 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 4029 |
| AhlI | ACTAGT | 1 cut(s) | 3644 |
| AjiI | CACGTC | 1 cut(s) | 1413 |
| AjnI | CCWGG | 8 cut(s) | 1260, 1271, 1276, 1417, 3232, 4450, 4531, 4660 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 276, 308, 2282, 2314 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 4527, 4559 |
| Alw21I | GWGCWC | 3 cut(s) | 172, 2039, 2600 |
| Alw26I | GTCTC | 8 cut(s) | 19, 594, 1372, 2279, 3262, 3417, 4368, 4680 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 2612, 2777 |
| Ama87I | CYCGRG | 1 cut(s) | 1582 |
| Aor51HI | AGCGCT | 1 cut(s) | 476 |
| AoxI | GGCC | 6 cut(s) | 895, 1274, 3278, 3913, 4282, 4576 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 4513, 4545 |
| AsiGI | ACCGGT | 1 cut(s) | 1936 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1303 |
| AspA2I | CCTAGG | 1 cut(s) | 1733 |
| AspLEI | GCGC | 5 cut(s) | 147, 477, 1120, 2139, 4622 |
| AsuC2I | CCSGG | 2 cut(s) | 1446, 4506 |
| AvaI | CYCGRG | 1 cut(s) | 1582 |
| AvaII | GGWCC | 8 cut(s) | 755, 3061, 3575, 4058, 4301, 4346, 4529, 4658 |
| AvrII | CCTAGG | 1 cut(s) | 1733 |
| AxyI | CCTNAGG | 2 cut(s) | 2197, 3678 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 3090, 3123, 4330, 4363 |
| BamHI | GGATCC | 1 cut(s) | 1253 |
| BanII | GRGCYC | 3 cut(s) | 1090, 2039, 2600 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2949, 2981 |
| BauI | CACGAG | 5 cut(s) | 66, 347, 2471, 3540, 4278 |
| BbsI | GAAGAC | 3 cut(s) | 1288, 1710, 1932 |
| Bbv12I | GWGCWC | 3 cut(s) | 172, 2039, 2600 |
| BbvCI | CCTCAGC | 4 cut(s) | 231, 3127, 3255, 4438 |
| BceAI | ACGGC | 3 cut(s) | 882, 2687, 2940 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 566, 600 |
| BciT130I | CCWGG | 8 cut(s) | 1262, 1273, 1278, 1419, 3234, 4452, 4533, 4662 |
| BciVI | GTATCC | 2 cut(s) | 3115, 4410 |
| BclI | TGATCA | 5 cut(s) | 222, 493, 3898, 3957, 4252 |
| BcnI | CCSGG | 2 cut(s) | 1446, 4506 |
| BcoDI | GTCTC | 8 cut(s) | 19, 594, 1372, 2279, 3262, 3417, 4368, 4680 |
| BcuI | ACTAGT | 1 cut(s) | 3644 |
| BfmI | CTRYAG | 6 cut(s) | 995, 1121, 1521, 2427, 3357, 4461 |
| BfoI | RGCGCY | 1 cut(s) | 478 |
| BfrI | CTTAAG | 1 cut(s) | 2150 |
| BfuAI | ACCTGC | 2 cut(s) | 370, 3997 |
| BfuI | GTATCC | 2 cut(s) | 3115, 4410 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2300 |
| BglII | AGATCT | 3 cut(s) | 2617, 3595, 3815 |
| BlnI | CCTAGG | 1 cut(s) | 1733 |
| BlpI | GCTNAGC | 2 cut(s) | 318, 3663 |
| BmcAI | AGTACT | 1 cut(s) | 2506 |
| Bme18I | GGWCC | 8 cut(s) | 755, 3061, 3575, 4058, 4301, 4346, 4529, 4658 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 4029 |
| BmeT110I | CYCGRG | 1 cut(s) | 1582 |
| BmgBI | CACGTC | 1 cut(s) | 1413 |
| BpiI | GAAGAC | 3 cut(s) | 1288, 1710, 1932 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 4213, 4245 |
| BpmI | CTGGAG | 7 cut(s) | 1534, 2238, 3216, 3930, 4350, 4554, 4683 |
| Bpu10I | CCTNAGC | 5 cut(s) | 231, 965, 3127, 3255, 4438 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 318, 3663 |
| BpuEI | CTTGAG | 2 cut(s) | 1847, 3284 |
| BpuMI | CCSGG | 2 cut(s) | 1446, 4506 |
| BsaBI | GATNNNNATC | 1 cut(s) | 3924 |
| BsaHI | GRCGYC | 1 cut(s) | 3476 |
| BsaI | GGTCTC | 2 cut(s) | 594, 3262 |
| BsaJI | CCNNGG | 6 cut(s) | 1261, 1317, 1733, 2880, 4450, 4504 |
| BsaWI | WCCGGW | 6 cut(s) | 1667, 1850, 1936, 2579, 3514, 4798 |
| BsaXI | ACNNNNNCTCC | 5 cut(s) | 31, 3466, 3496, 4527, 4557 |
| Bse118I | RCCGGY | 2 cut(s) | 1936, 3131 |
| Bse1I | ACTGG | 7 cut(s) | 1551, 3288, 3494, 4030, 4315, 4396, 4541 |
| Bse21I | CCTNAGG | 2 cut(s) | 2197, 3678 |
| Bse3DI | GCAATG | 4 cut(s) | 225, 2074, 2659, 4603 |
| Bse8I | GATNNNNATC | 1 cut(s) | 3924 |
| BseBI | CCWGG | 8 cut(s) | 1262, 1273, 1278, 1419, 3234, 4452, 4533, 4662 |
| BseDI | CCNNGG | 6 cut(s) | 1261, 1317, 1733, 2880, 4450, 4504 |
| BseJI | GATNNNNATC | 1 cut(s) | 3924 |
| BseMI | GCAATG | 4 cut(s) | 225, 2074, 2659, 4603 |
| BseNI | ACTGG | 7 cut(s) | 1551, 3288, 3494, 4030, 4315, 4396, 4541 |
| BseRI | GAGGAG | 1 cut(s) | 3474 |
| BseYI | CCCAGC | 2 cut(s) | 1490, 3658 |
| BsgI | GTGCAG | 1 cut(s) | 1917 |
| Bsh1236I | CGCG | 4 cut(s) | 1118, 1319, 2139, 4622 |
| BshFI | GGCC | 6 cut(s) | 897, 1276, 3280, 3915, 4284, 4578 |
| BshTI | ACCGGT | 1 cut(s) | 1936 |
| BsiHKAI | GWGCWC | 3 cut(s) | 172, 2039, 2600 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1582 |
| BsiSI | CCGG | 9 cut(s) | 1445, 1668, 1851, 1937, 2580, 3132, 3515, 4506, 4799 |
| BslFI | GGGAC | 4 cut(s) | 741, 1020, 1763, 3455 |
| BsmAI | GTCTC | 8 cut(s) | 19, 594, 1372, 2279, 3262, 3417, 4368, 4680 |
| BsmBI | CGTCTC | 4 cut(s) | 2279, 3417, 4368, 4680 |
| BsmFI | GGGAC | 4 cut(s) | 741, 1020, 1763, 3455 |
| BsmI | GAATGC | 4 cut(s) | 1303, 2053, 2257, 2296 |
| BsnI | GGCC | 6 cut(s) | 897, 1276, 3280, 3915, 4284, 4578 |
| Bso31I | GGTCTC | 2 cut(s) | 594, 3262 |
| BsoBI | CYCGRG | 1 cut(s) | 1582 |
| Bsp1286I | GDGCHC | 4 cut(s) | 172, 1090, 2039, 2600 |
| Bsp1407I | TGTACA | 1 cut(s) | 3836 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 318, 3663 |
| BspANI | GGCC | 6 cut(s) | 897, 1276, 3280, 3915, 4284, 4578 |
| BspFNI | CGCG | 4 cut(s) | 1118, 1319, 2139, 4622 |
| BspHI | TCATGA | 1 cut(s) | 4669 |
| BspMAI | CTGCAG | 3 cut(s) | 999, 1525, 3361 |
| BspMI | ACCTGC | 2 cut(s) | 370, 3997 |
| BspQI | GCTCTTC | 1 cut(s) | 1681 |
| BspTI | CTTAAG | 1 cut(s) | 2150 |
| BspTNI | GGTCTC | 2 cut(s) | 594, 3262 |
| BsrBI | CCGCTC | 1 cut(s) | 22 |
| BsrDI | GCAATG | 4 cut(s) | 225, 2074, 2659, 4603 |
| BsrFI | RCCGGY | 2 cut(s) | 1936, 3131 |
| BsrGI | TGTACA | 1 cut(s) | 3836 |
| BsrI | ACTGG | 7 cut(s) | 1551, 3288, 3494, 4030, 4315, 4396, 4541 |
| BssAI | RCCGGY | 2 cut(s) | 1936, 3131 |
| BssECI | CCNNGG | 6 cut(s) | 1261, 1317, 1733, 2880, 4450, 4504 |
| BssNI | GRCGYC | 1 cut(s) | 3476 |
| BssSI | CACGAG | 5 cut(s) | 66, 347, 2471, 3540, 4278 |
| BssT1I | CCWWGG | 2 cut(s) | 1733, 2880 |
| Bst2BI | CACGAG | 5 cut(s) | 66, 347, 2471, 3540, 4278 |
| Bst2UI | CCWGG | 8 cut(s) | 1262, 1273, 1278, 1419, 3234, 4452, 4533, 4662 |
| Bst6I | CTCTTC | 4 cut(s) | 1681, 2904, 4678, 4781 |
| BstACI | GRCGYC | 1 cut(s) | 3476 |
| BstAFI | CTTAAG | 1 cut(s) | 2150 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 908 |
| BstAUI | TGTACA | 1 cut(s) | 3836 |
| BstDSI | CCRYGG | 1 cut(s) | 1317 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 311, 4245 |
| BstFNI | CGCG | 4 cut(s) | 1118, 1319, 2139, 4622 |
| BstH2I | RGCGCY | 1 cut(s) | 478 |
| BstHHI | GCGC | 5 cut(s) | 147, 477, 1120, 2139, 4622 |
| BstMAI | GTCTC | 8 cut(s) | 19, 594, 1372, 2279, 3262, 3417, 4368, 4680 |
| BstNI | CCWGG | 8 cut(s) | 1262, 1273, 1278, 1419, 3234, 4452, 4533, 4662 |
| BstNSI | RCATGY | 6 cut(s) | 52, 1355, 1595, 1970, 2528, 4228 |
| BstSFI | CTRYAG | 6 cut(s) | 995, 1121, 1521, 2427, 3357, 4461 |
| BstUI | CGCG | 4 cut(s) | 1118, 1319, 2139, 4622 |
| BstV2I | GAAGAC | 3 cut(s) | 1288, 1710, 1932 |
| BstX2I | RGATCY | 8 cut(s) | 1253, 2146, 2617, 3259, 3461, 3595, 3632, 3815 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 3818 |
| BstYI | RGATCY | 8 cut(s) | 1253, 2146, 2617, 3259, 3461, 3595, 3632, 3815 |
| Bsu36I | CCTNAGG | 2 cut(s) | 2197, 3678 |
| BsuI | GTATCC | 2 cut(s) | 3115, 4410 |
| BsuRI | GGCC | 6 cut(s) | 897, 1276, 3280, 3915, 4284, 4578 |
| BtgI | CCRYGG | 1 cut(s) | 1317 |
| BtrI | CACGTC | 1 cut(s) | 1413 |
| BtsIMutI | CAGTG | 6 cut(s) | 279, 751, 1051, 2610, 2645, 3295 |
| BveI | ACCTGC | 2 cut(s) | 370, 3997 |
| CaiI | CAGNNNCTG | 2 cut(s) | 2612, 2777 |
| CciI | TCATGA | 1 cut(s) | 4669 |
| CfoI | GCGC | 5 cut(s) | 147, 477, 1120, 2139, 4622 |
| Cfr10I | RCCGGY | 2 cut(s) | 1936, 3131 |
| Cfr42I | CCGCGG | 1 cut(s) | 1320 |
| CseI | GACGC | 1 cut(s) | 3484 |
| Csp6I | GTAC | 9 cut(s) | 2493, 2505, 2966, 3211, 3321, 3776, 3837, 3869, 4339 |
| CspAI | ACCGGT | 1 cut(s) | 1936 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1594, 1629, 4683, 4718 |
| CviQI | GTAC | 9 cut(s) | 2493, 2505, 2966, 3211, 3321, 3776, 3837, 3869, 4339 |
| DraI | TTTAAA | 3 cut(s) | 780, 795, 4050 |
| DraIII | CACNNNGTG | 1 cut(s) | 4118 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 33, 3788 |
| DriI | GACNNNNNGTC | 1 cut(s) | 4029 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 33, 3788 |
| EaeI | YGGCCR | 1 cut(s) | 895 |
| Eam1104I | CTCTTC | 4 cut(s) | 1681, 2904, 4678, 4781 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 4029 |
| EarI | CTCTTC | 4 cut(s) | 1681, 2904, 4678, 4781 |
| EciI | GGCGGA | 3 cut(s) | 2247, 3644, 3880 |
| Ecl136II | GAGCTC | 2 cut(s) | 2037, 2598 |
| Eco130I | CCWWGG | 2 cut(s) | 1733, 2880 |
| Eco147I | AGGCCT | 1 cut(s) | 3915 |
| Eco24I | GRGCYC | 3 cut(s) | 1090, 2039, 2600 |
| Eco31I | GGTCTC | 2 cut(s) | 594, 3262 |
| Eco32I | GATATC | 2 cut(s) | 57, 3847 |
| Eco47I | GGWCC | 8 cut(s) | 755, 3061, 3575, 4058, 4301, 4346, 4529, 4658 |
| Eco47III | AGCGCT | 1 cut(s) | 476 |
| Eco53kI | GAGCTC | 2 cut(s) | 2037, 2598 |
| Eco57I | CTGAAG | 9 cut(s) | 849, 1418, 1530, 2634, 2765, 3348, 3612, 4353, 4805 |
| Eco81I | CCTNAGG | 2 cut(s) | 2197, 3678 |
| Eco88I | CYCGRG | 1 cut(s) | 1582 |
| EcoICRI | GAGCTC | 2 cut(s) | 2037, 2598 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 311, 4245 |
| EcoO109I | RGGNCCY | 2 cut(s) | 4346, 4529 |
| EcoRI | GAATTC | 2 cut(s) | 2602, 4149 |
| EcoRII | CCWGG | 8 cut(s) | 1260, 1271, 1276, 1417, 3232, 4450, 4531, 4660 |
| EcoRV | GATATC | 2 cut(s) | 57, 3847 |
| EcoT14I | CCWWGG | 2 cut(s) | 1733, 2880 |
| EcoT22I | ATGCAT | 3 cut(s) | 6, 564, 3724 |
| EcoT38I | GRGCYC | 3 cut(s) | 1090, 2039, 2600 |
| ErhI | CCWWGG | 2 cut(s) | 1733, 2880 |
| Esp3I | CGTCTC | 4 cut(s) | 2279, 3417, 4368, 4680 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 291, 323 |
| FaqI | GGGAC | 4 cut(s) | 741, 1020, 1763, 3455 |
| FauI | CCCGC | 2 cut(s) | 3304, 4481 |
| FauNDI | CATATG | 1 cut(s) | 3057 |
| FbaI | TGATCA | 5 cut(s) | 222, 493, 3898, 3957, 4252 |
| FblI | GTMKAC | 3 cut(s) | 528, 1059, 3016 |
| FriOI | GRGCYC | 3 cut(s) | 1090, 2039, 2600 |
| GlaI | GCGC | 5 cut(s) | 146, 476, 1119, 2138, 4621 |
| GsaI | CCCAGC | 2 cut(s) | 1494, 3662 |
| GsuI | CTGGAG | 7 cut(s) | 1534, 2238, 3216, 3930, 4350, 4554, 4683 |
| HaeII | RGCGCY | 1 cut(s) | 478 |
| HaeIII | GGCC | 6 cut(s) | 897, 1276, 3280, 3915, 4284, 4578 |
| HapII | CCGG | 9 cut(s) | 1445, 1668, 1851, 1937, 2580, 3132, 3515, 4506, 4799 |
| HgaI | GACGC | 1 cut(s) | 3484 |
| HhaI | GCGC | 5 cut(s) | 147, 477, 1120, 2139, 4622 |
| Hin1I | GRCGYC | 1 cut(s) | 3476 |
| Hin6I | GCGC | 5 cut(s) | 145, 475, 1118, 2137, 4620 |
| HinP1I | GCGC | 5 cut(s) | 145, 475, 1118, 2137, 4620 |
| HincII | GTYRAC | 2 cut(s) | 1207, 4513 |
| HindII | GTYRAC | 2 cut(s) | 1207, 4513 |
| HindIII | AAGCTT | 1 cut(s) | 1756 |
| HpaII | CCGG | 9 cut(s) | 1445, 1668, 1851, 1937, 2580, 3132, 3515, 4506, 4799 |
| Hpy166II | GTNNAC | 9 cut(s) | 197, 457, 529, 1060, 1207, 2114, 3017, 4386, 4513 |
| Hpy8I | GTNNAC | 9 cut(s) | 197, 457, 529, 1060, 1207, 2114, 3017, 4386, 4513 |
| Hpy99I | CGWCG | 5 cut(s) | 42, 45, 464, 1417, 4363 |
| HpyCH4IV | ACGT | 7 cut(s) | 462, 724, 1412, 3323, 3752, 3871, 4391 |
| HpySE526I | ACGT | 7 cut(s) | 462, 724, 1412, 3323, 3752, 3871, 4391 |
| Hsp92I | GRCGYC | 1 cut(s) | 3476 |
| HspAI | GCGC | 5 cut(s) | 145, 475, 1118, 2137, 4620 |
| Ksp22I | TGATCA | 5 cut(s) | 222, 493, 3898, 3957, 4252 |
| KspI | CCGCGG | 1 cut(s) | 1320 |
| LguI | GCTCTTC | 1 cut(s) | 1681 |
| LmnI | GCTCC | 7 cut(s) | 1197, 1427, 1441, 1553, 1739, 3110, 3526 |
| MaeII | ACGT | 7 cut(s) | 462, 724, 1412, 3323, 3752, 3871, 4391 |
| MaeIII | GTNAC | 9 cut(s) | 161, 463, 647, 1130, 1988, 2729, 3148, 3687, 4432 |
| MbiI | CCGCTC | 1 cut(s) | 22 |
| MflI | RGATCY | 8 cut(s) | 1253, 2146, 2617, 3259, 3461, 3595, 3632, 3815 |
| MhlI | GDGCHC | 4 cut(s) | 172, 1090, 2039, 2600 |
| MmeI | TCCRAC | 6 cut(s) | 635, 1281, 2299, 2529, 3605, 4328 |
| Mph1103I | ATGCAT | 3 cut(s) | 6, 564, 3724 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1303 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1308, 1350, 1773 |
| MspA1I | CMGCKG | 7 cut(s) | 1319, 2108, 3356, 3368, 3662, 4079, 4217 |
| MspCI | CTTAAG | 1 cut(s) | 2150 |
| MspI | CCGG | 9 cut(s) | 1445, 1668, 1851, 1937, 2580, 3132, 3515, 4506, 4799 |
| Mva1269I | GAATGC | 4 cut(s) | 1303, 2053, 2257, 2296 |
| MvaI | CCWGG | 8 cut(s) | 1262, 1273, 1278, 1419, 3234, 4452, 4533, 4662 |
| MvnI | CGCG | 4 cut(s) | 1118, 1319, 2139, 4622 |
| NciI | CCSGG | 2 cut(s) | 1446, 4506 |
| NdeI | CATATG | 1 cut(s) | 3057 |
| NmuCI | GTSAC | 3 cut(s) | 161, 1988, 2729 |
| NsiI | ATGCAT | 3 cut(s) | 6, 564, 3724 |
| NspI | RCATGY | 6 cut(s) | 52, 1355, 1595, 1970, 2528, 4228 |
| PaeI | GCATGC | 3 cut(s) | 1595, 1970, 4228 |
| PaeR7I | CTCGAG | 1 cut(s) | 1582 |
| PagI | TCATGA | 1 cut(s) | 4669 |
| PceI | AGGCCT | 1 cut(s) | 3915 |
| PciI | ACATGT | 2 cut(s) | 48, 2524 |
| PciSI | GCTCTTC | 1 cut(s) | 1681 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 468, 730 |
| PctI | GAATGC | 4 cut(s) | 1303, 2053, 2257, 2296 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1303 |
| PflFI | GACNNNGTC | 1 cut(s) | 1287 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 4025, 4310, 4589 |
| PfoI | TCCNGGA | 4 cut(s) | 1444, 3232, 4531, 4660 |
| PinAI | ACCGGT | 1 cut(s) | 1936 |
| PpuMI | RGGWCCY | 2 cut(s) | 4346, 4529 |
| PscI | ACATGT | 2 cut(s) | 48, 2524 |
| Psp124BI | GAGCTC | 2 cut(s) | 2039, 2600 |
| Psp1406I | AACGTT | 2 cut(s) | 724, 4391 |
| Psp5II | RGGWCCY | 2 cut(s) | 4346, 4529 |
| Psp6I | CCWGG | 8 cut(s) | 1260, 1271, 1276, 1417, 3232, 4450, 4531, 4660 |
| PspFI | CCCAGC | 2 cut(s) | 1490, 3658 |
| PspGI | CCWGG | 8 cut(s) | 1260, 1271, 1276, 1417, 3232, 4450, 4531, 4660 |
| PspPPI | RGGWCCY | 2 cut(s) | 4346, 4529 |
| PspXI | VCTCGAGB | 1 cut(s) | 1582 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 535, 567 |
| PstI | CTGCAG | 3 cut(s) | 999, 1525, 3361 |
| PstNI | CAGNNNCTG | 2 cut(s) | 2612, 2777 |
| PsuI | RGATCY | 8 cut(s) | 1253, 2146, 2617, 3259, 3461, 3595, 3632, 3815 |
| PsyI | GACNNNGTC | 1 cut(s) | 1287 |
| PvuII | CAGCTG | 6 cut(s) | 2108, 3356, 3368, 3662, 4079, 4217 |
| RsaI | GTAC | 9 cut(s) | 2494, 2506, 2967, 3212, 3322, 3777, 3838, 3870, 4340 |
| RsaNI | GTAC | 9 cut(s) | 2493, 2505, 2966, 3211, 3321, 3776, 3837, 3869, 4339 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1308, 1350, 1773 |
| SacI | GAGCTC | 2 cut(s) | 2039, 2600 |
| SacII | CCGCGG | 1 cut(s) | 1320 |
| SapI | GCTCTTC | 1 cut(s) | 1681 |
| ScaI | AGTACT | 1 cut(s) | 2506 |
| SduI | GDGCHC | 4 cut(s) | 172, 1090, 2039, 2600 |
| SfcI | CTRYAG | 6 cut(s) | 995, 1121, 1521, 2427, 3357, 4461 |
| Sfr274I | CTCGAG | 1 cut(s) | 1582 |
| Sfr303I | CCGCGG | 1 cut(s) | 1320 |
| SgrAI | CRCCGGYG | 1 cut(s) | 1936 |
| SgrBI | CCGCGG | 1 cut(s) | 1320 |
| SinI | GGWCC | 8 cut(s) | 755, 3061, 3575, 4058, 4301, 4346, 4529, 4658 |
| SlaI | CTCGAG | 1 cut(s) | 1582 |
| SmiI | ATTTAAAT | 1 cut(s) | 4050 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1308, 1350, 1773 |
| SmlI | CTYRAG | 4 cut(s) | 1582, 1826, 2150, 3263 |
| SmoI | CTYRAG | 4 cut(s) | 1582, 1826, 2150, 3263 |
| SpeI | ACTAGT | 1 cut(s) | 3644 |
| SphI | GCATGC | 3 cut(s) | 1595, 1970, 4228 |
| SseBI | AGGCCT | 1 cut(s) | 3915 |
| SspI | AATATT | 1 cut(s) | 4524 |
| SstI | GAGCTC | 2 cut(s) | 2039, 2600 |
| StuI | AGGCCT | 1 cut(s) | 3915 |
| StyI | CCWWGG | 2 cut(s) | 1733, 2880 |
| SwaI | ATTTAAAT | 1 cut(s) | 4050 |
| TaiI | ACGT | 7 cut(s) | 465, 727, 1415, 3326, 3755, 3874, 4394 |
| TaqII | GACCGA | 3 cut(s) | 576, 1360, 3286 |
| TatI | WGTACW | 2 cut(s) | 2504, 3836 |
| TauI | GCSGC | 1 cut(s) | 926 |
| TscAI | CASTG | 6 cut(s) | 286, 751, 1051, 2617, 2645, 3295 |
| TseFI | GTSAC | 3 cut(s) | 161, 1988, 2729 |
| Tsp45I | GTSAC | 3 cut(s) | 161, 1988, 2729 |
| TspGWI | ACGGA | 4 cut(s) | 372, 2395, 3567, 4536 |
| TspRI | CASTG | 6 cut(s) | 286, 751, 1051, 2617, 2645, 3295 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1287 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 4025, 4310, 4589 |
| Vha464I | CTTAAG | 1 cut(s) | 2150 |
| VpaK11BI | GGWCC | 8 cut(s) | 755, 3061, 3575, 4058, 4301, 4346, 4529, 4658 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 311, 4245 |
| XbaI | TCTAGA | 1 cut(s) | 310 |
| XceI | RCATGY | 6 cut(s) | 52, 1355, 1595, 1970, 2528, 4228 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 3872 |
| XhoI | CTCGAG | 1 cut(s) | 1582 |
| XmaJI | CCTAGG | 1 cut(s) | 1733 |
| XmiI | GTMKAC | 3 cut(s) | 528, 1059, 3016 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1303 |
| ZrmI | AGTACT | 1 cut(s) | 2506 |
| Zsp2I | ATGCAT | 3 cut(s) | 6, 564, 3724 |