TFIIS helical bundle-like domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G48050 AT3G48050 AT3G48060 AT3G48060 AT3G48060 |
| fragaria_vesca | FvH4_5g16640 FvH4_5g16640 FvH4_5g16640 FvH4_5g16640 |
| malus_domestica | MD06G1178400.v1.1 MD14G1184800.v1.1 |
| prunus_persica | Prupe.5G177500_v2.0.a1 Prupe.5G177500_v2.0.a1 |
| pyrus_communis | pycom06g15860 pycom14g15380 |
| rosa_chinensis | RchiOBHm_Chr7g0179511 |
| rosa_laevigata | RLG00000005348 |
| rosa_multiflora | Rmu_sc0000735.1_g000008 |
| rosa_roxburghii | Rroxscaffold_3G00273930 |
| rosa_rugosa | Rorug06G0424900 Rorug06G0424900 Rorug06G0425000.1 |
| rosa_samantha | Rh7AG024900 Rh7BG024100 Rh7CG025500 Rh7DG025300 |
| rosa_wichuraiana | Rw7G002000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 2 cut(s) | 1010, 3926 |
| Acc36I | ACCTGC | 4 cut(s) | 271, 1010, 3005, 3926 |
| AccB1I | GGYRCC | 1 cut(s) | 4853 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 590, 1928 |
| AccBSI | CCGCTC | 1 cut(s) | 1742 |
| AccI | GTMKAC | 2 cut(s) | 885, 2402 |
| AccII | CGCG | 3 cut(s) | 61, 380, 4783 |
| AclWI | GGATC | 8 cut(s) | 567, 985, 998, 1326, 1339, 1450, 1967, 3715 |
| AcoI | YGGCCR | 7 cut(s) | 72, 568, 895, 1263, 3091, 3731, 4518 |
| AcsI | RAATTY | 5 cut(s) | 315, 935, 3759, 3855, 4255 |
| AcuI | CTGAAG | 7 cut(s) | 849, 1374, 1989, 2233, 2313, 3083, 3603 |
| AcyI | GRCGYC | 2 cut(s) | 1521, 3814 |
| AdeI | CACNNNGTG | 1 cut(s) | 1949 |
| AflIII | ACRYGT | 4 cut(s) | 42, 59, 3244, 3896 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 4145 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 101, 133, 261, 293, 2182, 2214 |
| Alw21I | GWGCWC | 4 cut(s) | 157, 1358, 1661, 3202 |
| Alw26I | GTCTC | 3 cut(s) | 1273, 1281, 3887 |
| AlwI | GGATC | 8 cut(s) | 567, 985, 998, 1326, 1339, 1450, 1967, 3715 |
| AlwNI | CAGNNNCTG | 5 cut(s) | 2129, 2414, 3542, 3632, 4733 |
| Ama87I | CYCGRG | 6 cut(s) | 534, 1438, 2475, 3188, 3860, 4874 |
| ApoI | RAATTY | 5 cut(s) | 315, 935, 3759, 3855, 4255 |
| AseI | ATTAAT | 2 cut(s) | 492, 2267 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 3130, 3855 |
| AspLEI | GCGC | 2 cut(s) | 307, 647 |
| AsuC2I | CCSGG | 3 cut(s) | 1439, 1440, 3575 |
| AsuII | TTCGAA | 1 cut(s) | 1607 |
| AvaI | CYCGRG | 6 cut(s) | 534, 1438, 2475, 3188, 3860, 4874 |
| BaeGI | GKGCMC | 1 cut(s) | 1090 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 48, 81, 2394, 2427 |
| BamHI | GGATCC | 2 cut(s) | 990, 1331 |
| BanI | GGYRCC | 1 cut(s) | 4853 |
| BanII | GRGCYC | 3 cut(s) | 1358, 1661, 3202 |
| BbsI | GAAGAC | 5 cut(s) | 93, 2589, 4103, 4711, 4896 |
| Bbv12I | GWGCWC | 4 cut(s) | 157, 1358, 1661, 3202 |
| BbvCI | CCTCAGC | 4 cut(s) | 1866, 1887, 3396, 4818 |
| BceAI | ACGGC | 4 cut(s) | 615, 1250, 1331, 4906 |
| BciVI | GTATCC | 2 cut(s) | 1444, 4488 |
| BclI | TGATCA | 4 cut(s) | 478, 1612, 3280, 3940 |
| BcnI | CCSGG | 3 cut(s) | 1439, 1440, 3575 |
| BcoDI | GTCTC | 3 cut(s) | 1273, 1281, 3887 |
| BfoI | RGCGCY | 1 cut(s) | 648 |
| BfuAI | ACCTGC | 4 cut(s) | 271, 1010, 3005, 3926 |
| BfuI | GTATCC | 2 cut(s) | 1444, 4488 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 4145 |
| BmeT110I | CYCGRG | 6 cut(s) | 534, 1438, 2475, 3188, 3860, 4874 |
| BmrI | ACTGGG | 3 cut(s) | 2402, 3776, 4588 |
| BmuI | ACTGGG | 3 cut(s) | 2402, 3776, 4588 |
| BpiI | GAAGAC | 5 cut(s) | 93, 2589, 4103, 4711, 4896 |
| BpmI | CTGGAG | 9 cut(s) | 1647, 1770, 1791, 2337, 2376, 2617, 3996, 4260, 4755 |
| Bpu10I | CCTNAGC | 4 cut(s) | 1866, 1887, 3396, 4818 |
| Bpu14I | TTCGAA | 1 cut(s) | 1607 |
| BpuEI | CTTGAG | 1 cut(s) | 3873 |
| BpuMI | CCSGG | 3 cut(s) | 1439, 1440, 3575 |
| Bsa29I | ATCGAT | 1 cut(s) | 3947 |
| BsaAI | YACGTR | 1 cut(s) | 4287 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2025 |
| BsaHI | GRCGYC | 2 cut(s) | 1521, 3814 |
| BsaI | GGTCTC | 1 cut(s) | 1281 |
| BsaXI | ACNNNNNCTCC | 5 cut(s) | 31, 1275, 1305, 3088, 3118 |
| Bse118I | RCCGGY | 4 cut(s) | 432, 897, 4168, 4426 |
| Bse3DI | GCAATG | 2 cut(s) | 2119, 4455 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2025 |
| BseCI | ATCGAT | 1 cut(s) | 3947 |
| BseJI | GATNNNNATC | 1 cut(s) | 2025 |
| BseMI | GCAATG | 2 cut(s) | 2119, 4455 |
| BseMII | CTCAG | 8 cut(s) | 1857, 1878, 2058, 2406, 2970, 3057, 3387, 4809 |
| BseRI | GAGGAG | 7 cut(s) | 35, 521, 1076, 1669, 2620, 2963, 3266 |
| BseSI | GKGCMC | 1 cut(s) | 1090 |
| BseX3I | CGGCCG | 2 cut(s) | 1263, 4518 |
| BseYI | CCCAGC | 4 cut(s) | 2122, 3817, 4444, 4565 |
| BsgI | GTGCAG | 2 cut(s) | 578, 1926 |
| Bsh1236I | CGCG | 3 cut(s) | 61, 380, 4783 |
| Bsh1285I | CGRYCG | 2 cut(s) | 1266, 4521 |
| BshNI | GGYRCC | 1 cut(s) | 4853 |
| BshVI | ATCGAT | 1 cut(s) | 3947 |
| BsiEI | CGRYCG | 2 cut(s) | 1266, 4521 |
| BsiHKAI | GWGCWC | 4 cut(s) | 157, 1358, 1661, 3202 |
| BsiHKCI | CYCGRG | 6 cut(s) | 534, 1438, 2475, 3188, 3860, 4874 |
| BsiSI | CCGG | 8 cut(s) | 433, 863, 898, 1439, 3094, 3575, 4169, 4427 |
| BslFI | GGGAC | 7 cut(s) | 427, 2104, 2171, 2563, 4365, 4763, 4901 |
| BsmAI | GTCTC | 3 cut(s) | 1273, 1281, 3887 |
| BsmBI | CGTCTC | 1 cut(s) | 1273 |
| BsmFI | GGGAC | 7 cut(s) | 427, 2104, 2171, 2563, 4365, 4763, 4901 |
| BsmI | GAATGC | 1 cut(s) | 2974 |
| Bso31I | GGTCTC | 1 cut(s) | 1281 |
| BsoBI | CYCGRG | 6 cut(s) | 534, 1438, 2475, 3188, 3860, 4874 |
| Bsp119I | TTCGAA | 1 cut(s) | 1607 |
| Bsp1286I | GDGCHC | 5 cut(s) | 157, 1090, 1358, 1661, 3202 |
| Bsp1407I | TGTACA | 3 cut(s) | 525, 3404, 4416 |
| Bsp19I | CCATGG | 2 cut(s) | 1405, 2688 |
| BspCNI | CTCAG | 8 cut(s) | 1858, 1879, 2057, 2407, 2971, 3056, 3388, 4810 |
| BspDI | ATCGAT | 1 cut(s) | 3947 |
| BspFNI | CGCG | 3 cut(s) | 61, 380, 4783 |
| BspHI | TCATGA | 1 cut(s) | 2926 |
| BspMAI | CTGCAG | 6 cut(s) | 852, 2659, 3421, 3445, 3640, 4297 |
| BspMI | ACCTGC | 4 cut(s) | 271, 1010, 3005, 3926 |
| BspPI | GGATC | 8 cut(s) | 567, 985, 998, 1326, 1339, 1450, 1967, 3715 |
| BspQI | GCTCTTC | 3 cut(s) | 1346, 1705, 2136 |
| BspT104I | TTCGAA | 1 cut(s) | 1607 |
| BspT107I | GGYRCC | 1 cut(s) | 4853 |
| BspTNI | GGTCTC | 1 cut(s) | 1281 |
| BsrBI | CCGCTC | 1 cut(s) | 1742 |
| BsrDI | GCAATG | 2 cut(s) | 2119, 4455 |
| BsrFI | RCCGGY | 4 cut(s) | 432, 897, 4168, 4426 |
| BsrGI | TGTACA | 3 cut(s) | 525, 3404, 4416 |
| BssAI | RCCGGY | 4 cut(s) | 432, 897, 4168, 4426 |
| BssNI | GRCGYC | 2 cut(s) | 1521, 3814 |
| BssT1I | CCWWGG | 4 cut(s) | 1405, 1550, 2688, 4634 |
| Bst6I | CTCTTC | 5 cut(s) | 1346, 1705, 2136, 3336, 3671 |
| BstACI | GRCGYC | 2 cut(s) | 1521, 3814 |
| BstAUI | TGTACA | 3 cut(s) | 525, 3404, 4416 |
| BstBAI | YACGTR | 1 cut(s) | 4287 |
| BstBI | TTCGAA | 1 cut(s) | 1607 |
| BstC8I | GCNNGC | 7 cut(s) | 434, 549, 895, 909, 2343, 2472, 3735 |
| BstDSI | CCRYGG | 3 cut(s) | 1405, 2688, 4781 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 4817, 4861 |
| BstFNI | CGCG | 3 cut(s) | 61, 380, 4783 |
| BstH2I | RGCGCY | 1 cut(s) | 648 |
| BstHHI | GCGC | 2 cut(s) | 307, 647 |
| BstMAI | GTCTC | 3 cut(s) | 1273, 1281, 3887 |
| BstMCI | CGRYCG | 2 cut(s) | 1266, 4521 |
| BstNSI | RCATGY | 5 cut(s) | 46, 551, 2264, 3248, 3900 |
| BstSLI | GKGCMC | 1 cut(s) | 1090 |
| BstSNI | TACGTA | 1 cut(s) | 4287 |
| BstUI | CGCG | 3 cut(s) | 61, 380, 4783 |
| BstV2I | GAAGAC | 5 cut(s) | 93, 2589, 4103, 4711, 4896 |
| BstX2I | RGATCY | 4 cut(s) | 990, 1331, 1442, 1972 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1001 |
| BstYI | RGATCY | 4 cut(s) | 990, 1331, 1442, 1972 |
| BstZI | CGGCCG | 2 cut(s) | 1263, 4518 |
| Bsu15I | ATCGAT | 1 cut(s) | 3947 |
| BsuI | GTATCC | 2 cut(s) | 1444, 4488 |
| BsuTUI | ATCGAT | 1 cut(s) | 3947 |
| BtgI | CCRYGG | 3 cut(s) | 1405, 2688, 4781 |
| BtsI | GCAGTG | 2 cut(s) | 4179, 4204 |
| BveI | ACCTGC | 4 cut(s) | 271, 1010, 3005, 3926 |
| Cac8I | GCNNGC | 7 cut(s) | 434, 549, 895, 909, 2343, 2472, 3735 |
| CaiI | CAGNNNCTG | 5 cut(s) | 2129, 2414, 3542, 3632, 4733 |
| CciI | TCATGA | 1 cut(s) | 2926 |
| CfoI | GCGC | 2 cut(s) | 307, 647 |
| Cfr10I | RCCGGY | 4 cut(s) | 432, 897, 4168, 4426 |
| Cfr42I | CCGCGG | 1 cut(s) | 4784 |
| Cfr9I | CCCGGG | 1 cut(s) | 1438 |
| ClaI | ATCGAT | 1 cut(s) | 3947 |
| CseI | GACGC | 2 cut(s) | 1510, 3822 |
| CsiI | ACCWGGT | 1 cut(s) | 3295 |
| DraI | TTTAAA | 5 cut(s) | 780, 1257, 1980, 2967, 4861 |
| DraIII | CACNNNGTG | 1 cut(s) | 1949 |
| DriI | GACNNNNNGTC | 1 cut(s) | 4145 |
| EaeI | YGGCCR | 7 cut(s) | 72, 568, 895, 1263, 3091, 3731, 4518 |
| EagI | CGGCCG | 2 cut(s) | 1263, 4518 |
| Eam1104I | CTCTTC | 5 cut(s) | 1346, 1705, 2136, 3336, 3671 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 4145 |
| EarI | CTCTTC | 5 cut(s) | 1346, 1705, 2136, 3336, 3671 |
| EciI | GGCGGA | 1 cut(s) | 3648 |
| Ecl136II | GAGCTC | 3 cut(s) | 1356, 1659, 3200 |
| EclXI | CGGCCG | 2 cut(s) | 1263, 4518 |
| Eco105I | TACGTA | 1 cut(s) | 4287 |
| Eco130I | CCWWGG | 4 cut(s) | 1405, 1550, 2688, 4634 |
| Eco147I | AGGCCT | 3 cut(s) | 2155, 4639, 4713 |
| Eco24I | GRGCYC | 3 cut(s) | 1358, 1661, 3202 |
| Eco31I | GGTCTC | 1 cut(s) | 1281 |
| Eco52I | CGGCCG | 2 cut(s) | 1263, 4518 |
| Eco53kI | GAGCTC | 3 cut(s) | 1356, 1659, 3200 |
| Eco57I | CTGAAG | 7 cut(s) | 849, 1374, 1989, 2233, 2313, 3083, 3603 |
| Eco88I | CYCGRG | 6 cut(s) | 534, 1438, 2475, 3188, 3860, 4874 |
| EcoICRI | GAGCTC | 3 cut(s) | 1356, 1659, 3200 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 4817, 4861 |
| EcoO109I | RGGNCCY | 7 cut(s) | 1736, 2118, 3647, 3667, 4379, 4604, 4730 |
| EcoRI | GAATTC | 1 cut(s) | 3855 |
| EcoT14I | CCWWGG | 4 cut(s) | 1405, 1550, 2688, 4634 |
| EcoT22I | ATGCAT | 4 cut(s) | 6, 549, 1167, 2266 |
| EcoT38I | GRGCYC | 3 cut(s) | 1358, 1661, 3202 |
| ErhI | CCWWGG | 4 cut(s) | 1405, 1550, 2688, 4634 |
| Esp3I | CGTCTC | 1 cut(s) | 1273 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 801, 833, 1771, 1803, 2997, 3029, 4095, 4127 |
| FaqI | GGGAC | 7 cut(s) | 427, 2104, 2171, 2563, 4365, 4763, 4901 |
| FauI | CCCGC | 4 cut(s) | 1747, 4615, 4673, 4788 |
| FbaI | TGATCA | 4 cut(s) | 478, 1612, 3280, 3940 |
| FblI | GTMKAC | 2 cut(s) | 885, 2402 |
| FriOI | GRGCYC | 3 cut(s) | 1358, 1661, 3202 |
| GlaI | GCGC | 2 cut(s) | 306, 646 |
| GsaI | CCCAGC | 4 cut(s) | 2126, 3821, 4448, 4569 |
| GsuI | CTGGAG | 9 cut(s) | 1647, 1770, 1791, 2337, 2376, 2617, 3996, 4260, 4755 |
| HaeII | RGCGCY | 1 cut(s) | 648 |
| HapII | CCGG | 8 cut(s) | 433, 863, 898, 1439, 3094, 3575, 4169, 4427 |
| HgaI | GACGC | 2 cut(s) | 1510, 3822 |
| HhaI | GCGC | 2 cut(s) | 307, 647 |
| Hin1I | GRCGYC | 2 cut(s) | 1521, 3814 |
| Hin6I | GCGC | 2 cut(s) | 305, 645 |
| HinP1I | GCGC | 2 cut(s) | 305, 645 |
| HincII | GTYRAC | 2 cut(s) | 48, 3372 |
| HindII | GTYRAC | 2 cut(s) | 48, 3372 |
| HindIII | AAGCTT | 3 cut(s) | 275, 1198, 1397 |
| HpaI | GTTAAC | 1 cut(s) | 3372 |
| HpaII | CCGG | 8 cut(s) | 433, 863, 898, 1439, 3094, 3575, 4169, 4427 |
| HpyCH4IV | ACGT | 2 cut(s) | 130, 4286 |
| HpySE526I | ACGT | 2 cut(s) | 130, 4286 |
| Hsp92I | GRCGYC | 2 cut(s) | 1521, 3814 |
| HspAI | GCGC | 2 cut(s) | 305, 645 |
| KflI | GGGWCCC | 2 cut(s) | 2118, 4379 |
| KroI | GCCGGC | 1 cut(s) | 432 |
| KroNI | GCCGGC | 1 cut(s) | 434 |
| Ksp22I | TGATCA | 4 cut(s) | 478, 1612, 3280, 3940 |
| KspAI | GTTAAC | 1 cut(s) | 3372 |
| KspI | CCGCGG | 1 cut(s) | 4784 |
| LguI | GCTCTTC | 3 cut(s) | 1346, 1705, 2136 |
| LmnI | GCTCC | 7 cut(s) | 685, 1656, 1810, 2633, 2710, 2792, 4194 |
| MabI | ACCWGGT | 1 cut(s) | 3295 |
| MaeII | ACGT | 2 cut(s) | 130, 4286 |
| MbiI | CCGCTC | 1 cut(s) | 1742 |
| MfeI | CAATTG | 2 cut(s) | 518, 4344 |
| MflI | RGATCY | 4 cut(s) | 990, 1331, 1442, 1972 |
| MhlI | GDGCHC | 5 cut(s) | 157, 1090, 1358, 1661, 3202 |
| MluI | ACGCGT | 1 cut(s) | 59 |
| MlyI | GAGTC | 3 cut(s) | 632, 2069, 2454 |
| MmeI | TCCRAC | 4 cut(s) | 276, 620, 982, 3680 |
| Mph1103I | ATGCAT | 4 cut(s) | 6, 549, 1167, 2266 |
| MroNI | GCCGGC | 1 cut(s) | 432 |
| MroXI | GAANNNNTTC | 2 cut(s) | 3130, 3855 |
| MslI | CAYNNNNRTG | 3 cut(s) | 336, 1326, 3544 |
| MspA1I | CMGCKG | 8 cut(s) | 1337, 1956, 2126, 2315, 3221, 3737, 4610, 4783 |
| MspI | CCGG | 8 cut(s) | 433, 863, 898, 1439, 3094, 3575, 4169, 4427 |
| MunI | CAATTG | 2 cut(s) | 518, 4344 |
| Mva1269I | GAATGC | 1 cut(s) | 2974 |
| MvnI | CGCG | 3 cut(s) | 61, 380, 4783 |
| NaeI | GCCGGC | 1 cut(s) | 434 |
| NciI | CCSGG | 3 cut(s) | 1439, 1440, 3575 |
| NcoI | CCATGG | 2 cut(s) | 1405, 2688 |
| NgoMIV | GCCGGC | 1 cut(s) | 432 |
| NmeAIII | GCCGAG | 1 cut(s) | 4496 |
| NmuCI | GTSAC | 6 cut(s) | 208, 1046, 1360, 1522, 2159, 4762 |
| NsiI | ATGCAT | 4 cut(s) | 6, 549, 1167, 2266 |
| NspI | RCATGY | 5 cut(s) | 46, 551, 2264, 3248, 3900 |
| NspV | TTCGAA | 1 cut(s) | 1607 |
| PaeI | GCATGC | 1 cut(s) | 551 |
| PaeR7I | CTCGAG | 3 cut(s) | 534, 2475, 3860 |
| PagI | TCATGA | 1 cut(s) | 2926 |
| PaqCI | CACCTGC | 2 cut(s) | 1010, 3926 |
| PceI | AGGCCT | 3 cut(s) | 2155, 4639, 4713 |
| PciI | ACATGT | 3 cut(s) | 42, 3244, 3896 |
| PciSI | GCTCTTC | 3 cut(s) | 1346, 1705, 2136 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 110 |
| PctI | GAATGC | 1 cut(s) | 2974 |
| PdiI | GCCGGC | 1 cut(s) | 434 |
| PdmI | GAANNNNTTC | 2 cut(s) | 3130, 3855 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 590, 1928 |
| PleI | GAGTC | 3 cut(s) | 631, 2068, 2453 |
| PpsI | GAGTC | 3 cut(s) | 631, 2068, 2453 |
| Ppu21I | YACGTR | 1 cut(s) | 4287 |
| PpuMI | RGGWCCY | 5 cut(s) | 1736, 2118, 3667, 4379, 4604 |
| PscI | ACATGT | 3 cut(s) | 42, 3244, 3896 |
| PshBI | ATTAAT | 2 cut(s) | 492, 2267 |
| Psp124BI | GAGCTC | 3 cut(s) | 1358, 1661, 3202 |
| Psp5II | RGGWCCY | 5 cut(s) | 1736, 2118, 3667, 4379, 4604 |
| PspFI | CCCAGC | 4 cut(s) | 2122, 3817, 4444, 4565 |
| PspPPI | RGGWCCY | 5 cut(s) | 1736, 2118, 3667, 4379, 4604 |
| PspXI | VCTCGAGB | 1 cut(s) | 534 |
| PstI | CTGCAG | 6 cut(s) | 852, 2659, 3421, 3445, 3640, 4297 |
| PstNI | CAGNNNCTG | 5 cut(s) | 2129, 2414, 3542, 3632, 4733 |
| PsuI | RGATCY | 4 cut(s) | 990, 1331, 1442, 1972 |
| PvuII | CAGCTG | 3 cut(s) | 2126, 2315, 3737 |
| RseI | CAYNNNNRTG | 3 cut(s) | 336, 1326, 3544 |
| SacI | GAGCTC | 3 cut(s) | 1358, 1661, 3202 |
| SacII | CCGCGG | 1 cut(s) | 4784 |
| SapI | GCTCTTC | 3 cut(s) | 1346, 1705, 2136 |
| SchI | GAGTC | 3 cut(s) | 632, 2069, 2454 |
| SduI | GDGCHC | 5 cut(s) | 157, 1090, 1358, 1661, 3202 |
| SexAI | ACCWGGT | 1 cut(s) | 3295 |
| Sfr274I | CTCGAG | 3 cut(s) | 534, 2475, 3860 |
| Sfr303I | CCGCGG | 1 cut(s) | 4784 |
| SfuI | TTCGAA | 1 cut(s) | 1607 |
| SgrBI | CCGCGG | 1 cut(s) | 4784 |
| SlaI | CTCGAG | 3 cut(s) | 534, 2475, 3860 |
| SmaI | CCCGGG | 1 cut(s) | 1440 |
| SmiI | ATTTAAAT | 1 cut(s) | 1257 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 336, 1326, 3544 |
| SmlI | CTYRAG | 4 cut(s) | 534, 2475, 3860, 3888 |
| SmoI | CTYRAG | 4 cut(s) | 534, 2475, 3860, 3888 |
| SnaBI | TACGTA | 1 cut(s) | 4287 |
| SphI | GCATGC | 1 cut(s) | 551 |
| SseBI | AGGCCT | 3 cut(s) | 2155, 4639, 4713 |
| SstI | GAGCTC | 3 cut(s) | 1358, 1661, 3202 |
| StuI | AGGCCT | 3 cut(s) | 2155, 4639, 4713 |
| StyI | CCWWGG | 4 cut(s) | 1405, 1550, 2688, 4634 |
| SwaI | ATTTAAAT | 1 cut(s) | 1257 |
| TaiI | ACGT | 2 cut(s) | 133, 4289 |
| TaqII | GACCGA | 1 cut(s) | 1348 |
| TatI | WGTACW | 5 cut(s) | 525, 2089, 2729, 3404, 4416 |
| TauI | GCSGC | 4 cut(s) | 353, 1265, 4523, 4786 |
| TseFI | GTSAC | 6 cut(s) | 208, 1046, 1360, 1522, 2159, 4762 |
| Tsp45I | GTSAC | 6 cut(s) | 208, 1046, 1360, 1522, 2159, 4762 |
| TspGWI | ACGGA | 8 cut(s) | 46, 141, 357, 396, 1174, 2960, 4152, 4464 |
| TspMI | CCCGGG | 1 cut(s) | 1438 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 590, 1928 |
| VspI | ATTAAT | 2 cut(s) | 492, 2267 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 4817, 4861 |
| XapI | RAATTY | 5 cut(s) | 315, 935, 3759, 3855, 4255 |
| XbaI | TCTAGA | 1 cut(s) | 2441 |
| XceI | RCATGY | 5 cut(s) | 46, 551, 2264, 3248, 3900 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 4847 |
| XhoI | CTCGAG | 3 cut(s) | 534, 2475, 3860 |
| XmaI | CCCGGG | 1 cut(s) | 1438 |
| XmiI | GTMKAC | 2 cut(s) | 885, 2402 |
| XmnI | GAANNNNTTC | 2 cut(s) | 3130, 3855 |
| Zsp2I | ATGCAT | 4 cut(s) | 6, 549, 1167, 2266 |