Rmu_sc0000735.1_g000008

TFIIS helical bundle-like domain

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000735.1
Physical Location & Seq
Forward (+)
26494 .. 43164
16671 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000735.1_g000008.1.cds

Sequence Viewer

Length: 6096 bp
atgaagaagaggattgcaaaatggctcagtgtcccttttagccttcgttctccacagcaatcgccgccgaatcgccgcccgttcagctccagacgtaagattacaatgatgatggtgacaaggtatttcaggcgaacactgtttgctgcagccaaatcagaatcttctggtgctgcttctatggctaggacgacggcccacaacccgctcgaggagttctttgaagcagataggaaggctgatgaagaaaagccagttgtatatggtcgaagttggaaggctcaggaactgcgcctgaagtcttgggatgatctcaataagctatggtttgttctgcttaaagagaaaaacatgctgatgactcaacgtcagatgcttcacgcacagaatcttcgttttcctaatcctgagcgccttcccaaagtgaggaagtcaatgtgtcgtatcaagcatgtactcactgagagagcaattgaagaacctgattcaaggaggtctgctgagatgaagaggatgataaatgcgttcagccgatcttgtgcggcgaccacccaacctagccctaggttggccatcatctctggccggcaggaaataggggatgtgagggatttggatctgtgttccagtccgatcagcctcaacggttggagggcaagggatgagaggccctgtgtggcggacgtgcgatctctggacccggatcaaagcggtcccgttcaggttgatggcggcgagggtgtttgcatacctacccgtggatgtggcggagatcgcagttgtgcaccgtgcagtgctccagagagcacgctggtgggatgtctgcctcaaggatggtggttacatctgatgcccgggttggcagagaagtggtcacggcggcgtctggcgtatgcggcagaggagcggcaagtggggtgcccagaactttttgggggcccaaagggtttgggtggctcaaatcaggttgggtgcccaaatcattttggaagcccaaaaaatttgtggtggtttaggctacaatcagatgggcttggagtgtttttctgttggaatggggctctttggcggaccttgcgatttgaccctgtctctccagggtttcgtatttgggatcctggaggagcattacccagtagttggagctcacctgcgggtgaggctagtttattctccgctgcccgatctgcccgagctgcccgtcctctgcagctagctagctcgctcgctcgctcgcgcttaccaagtaccaagaaggcccagccagccatccggtgtgtggaattagggtttcgatttcgttttcggcgcgatcgggattggggaaaatgcaaggctatgcatgggaggggaggtgaggagaggaaacggagtcggcacatgttgacagtccctacggccgatggttcttcttcttcatcttcgaattcgactaattcctttttcaaggacggacgcaagatcagtgttggtgattgtgctctgttcaaacctccccaggattccccacctttcattggaataattcgttggttaattacaggcaaagagaacaagttaagagtaggagtgaattggctttatcgaccttctgaagtaaagcttggcaaaggcgaactgttcgatgctgagctgaacgaaattttctattcgttccataaggatgagattcctgccgcatcgttacttcatccatgtaaagtcgcgttccttcctaaaggtgttaagcttccatctgggatttcatcttttgtatgccggcgtgtttatgacattacaaacaagtgtttatggtggctaactgatcaggactatattaatgagcgacaagaggaagtagataaattgttatataaaactcgagtagaaatgcaggcaacagtgcagtcaggtggccgatctccaaaaccaatgaacggtccatcttcagcatcacagttaaaagctggatcagatggtgtccagaatagtgcctcatccttttcttctcaagttaaggggaaaaaaagggagcggggggaccaggggtctgagcctgtcaaacgagaacgcattacaagaatagatgatggggattctggtcactgtaaacaggaaagcactttaaagtcagaaattgcaaaaataactgaaagaggagggcttgtagactctgaaggggttgaaaaattggttcagctcatggggcctgatagaaatgagaaaaaaatagatgtggctggccggtctatgcttgctagtgttttagcagccacagataaatttgattgccttagtcgatttgtgcagctcaggggtttgcctgtattcgatgagtggctacaagaggtccacaaagggaagataggtgatggcagtgcatccaaagatagtgacaaatgtgttgaggagtttctcttggttttacttcgtgccctggataagctgccagtaaatcttaatgctctacaaatgtgtaacattggaaagtccgtcaatcacttgcggacacataagaacttggaaatccagaagaaagcaagaagtttagttgatacatggaagaaacgtgttgaagctgaaatgaagatcaatgaggcaaagtctggtttaaatcaggctggcccctggtctgctagacctaggttacctgaagtttcacatggtggaaacaggcattcaggtgtatccactgatgttgctgtcaagagctcagttacacagctttctgtatcaaacaaatcttcagttaagcttgtccaaggagataatattaccaaatctgcttctgcatctccagtttctttgaaatcggtgccgtcacctgtttcagcaggttctaacttaaaagatggacaatcccggattgctcctgttggtgtcacagttgatcttcctatgacaactacaagggatgagaaaagcagcagttctagtcagtctcacaacaatagccagtcatgttcaaatgatcatgctagaaatggaggcgtttctggtaaagaggatgcaaggagctcgactgctggttctatgaataagacatcaggtggttcttcacggcctaggaaatcaataaatggcttcccaggttctactccctctggagctcaaaaagaaaccgtatcgagcagaagttcatcattgcacaagaatccagcttcagaaaaatcattacaggctggaataagtgagaaggtagttgatgataacaaattaattgtcaagattccgaatcgaggtcgcagtccagcacaaagtggaagcggaggttcttttgaggatctttcgaacatgaacagcagagcttcttctcctatgcattctgaaaagcatgatcaacttgattgtaccttaaaggaaaaggttgatgtttatcgagccactggtacctcagatgttaacacagagtcctggcaaagcaacgattttaaagacatattgactggatctgatgagggggatgggtcacctgctgctgttactaatgaagagcgcgaccctaagaaaactgcagaagtcccaaaagctgcttcctcatcatcagggaatgaacagaaaccaggtaacgctcaggaggcttctttcagctctatgcatgccttggttgaaagctgtgtgaagtattctgaaggtaatgcttctgttggagatgatcttggtatgaatctgcttgctagtgtggccgctgatgagatgtctaaatcagaatctccaactgattctccacagaggagcaccccagtatctgagcatctttgcaaaggcaatgattccagagtcaaatcacctcttcttgaggaccttgctcaagatgaaagccagtctaatgtcggtgctgatgatgaatatcagaagcatggtattgtctctgctacttttgggactaaggatgggggtggtaaaggccccttcccagagaacaaagaaaaaccaattgaagttactttagctcctgctgtgactccctgccctgctgttgcagttgaggaaactatggatagtgaaggaaccaaaccacctgcagagaaaaaggtggtgggtggagtcgatgagactcaagatattaaacaaggtctaactggtcatttgtcaaatgaaactaaggctaatgatgcaatttcaagggcagtagatgggaaagaagccactgaagaatcatctttgcacccagcgttggaagttgatggtaaactgtctaccatacagatgcattctgagtcagtaaaaggaacaagtgaaggtgtgatgctttcttcagaaaaagtctctgcaccaaaggctgataatacagatgaaatggaggataggagttgctctaatcagacagaaagacacagaccagaaagtaatgatcctatcttgcctaaaaaagaaagtgataattctttaattcctgagaatcgagctgcaaggggctctagttctgctgttactgaccacaacagtgagcacatggaggaaattttggaaagtaaagtggctaatgatcaacttagcgaatctgttgttttgaaggtgaaacctgatcgtccaatgcaagaagtagaacatgtgaggtccaagaagtctaaagttactggaatggatgcaaaagtggaagtcgaagaagccggggaatgcacatctacaactgcagatactcctatgtccgctgtgggagtatcagacatggatgcaaaagtggagtttgatttgaatgaaggctttaatgcagatgatgggaaatttggggagccaaataacttgacagcacctggatgttcaactgctctacggttgattagccctttaccattttctgtttcttctttgtctagtggccttcctgcttcagttacagtgccttctgcagcgaaagggccctgtgttccaccagatgacttgttgaagggtaaacaggaggatggttggaaaggaacagcagcaacaagtgccttccggccagctgagcctagaaaagtatcagagttgccattaggtgcaacaaatattgcaattcctgaccctacagctggcaagcaaggacgccctgctttggatattgacttgaatgtaccggacgagagagttctcgaggatatggcttctcaagagatattttctctttttgccccgacaagtaataatgatttttcgcgtgatcaatcgatgagtatggcacctgttcgcagctcaggaggtctggatcttgatttgaatcaagttgacgaggcttccgaaattggtagttactcattgagcaatattcgccgaatgaataacccaattctgtcaacaaaagcatcaggtggacctccaaatggagaagtcagtcatcgtagggattttgatttgaataatggaccagcctttgacgatgtaagtgctgaaccggcagtgtttagtcagcataccaggagcagtatgccatctcaacctcctaattctggttttaggatgagcaatacagaagcgggaaacttctcatcttggttttctgcagccaatacctactcagctgtcacaattccttcgattatgccagatcgtggagagcaaccattcccaattgttgcaactggtggaccacaaaggacgggtcctcctaccggtagcaacccctttactcctgatgtctacaggggttcagtggtgtcatcttctccagcagtgccttatccttctacttcatttcaatatccagtttttccttttggaagcagttttcctctgccttcagccacgtttgcaggtggttcaacaacatatctggattcatctgctggaaggctttgcattcctgctgtccgttcccagttgttaggacctggtagtatgattccttccaactacccaaggccatatgtagttaatgttccagatggtagcaataacagtagtgctgagaacagtaggaaatggggaaggcaggggctagacctcaatgcagggcctggtggcccagacttagaggggagagacatgacttcacctcttgcaccatggcaattctctgttgccagttcacaggcattagctgaggagcaagcaagaatgttccagatgtcaggcggcacctttaagaggaaggaacctgagggaggatgggatggctacaaacaaccttggaaatag

Protein Analysis

2031

Amino Acids

219.78

Weight (kDa)

8.17

Isoelectric Point (pI)

56.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 4 cut(s) 1159, 3460, 4009, 5702
Acc36I ACCTGC 5 cut(s) 1159, 2804, 3460, 4009, 5702
Acc65I GGTACC 1 cut(s) 3368
AccB1I GGYRCC 6 cut(s) 918, 972, 2794, 3368, 5140, 6035
AccB7I CCANNNNNTGG 2 cut(s) 1140, 5510
AccBSI CCGCTC 3 cut(s) 208, 907, 2014
AccI GTMKAC 3 cut(s) 2148, 4178, 5598
AccII CGCG 5 cut(s) 1237, 1311, 1706, 3477, 5119
AclWI GGATC 9 cut(s) 624, 711, 1109, 1122, 1957, 3270, 3436, 4328, 5175
AcoI YGGCCR 7 cut(s) 570, 583, 1398, 1894, 2221, 3663, 4922
AcsI RAATTY 6 cut(s) 1000, 1426, 1641, 2261, 4443, 4706
AcyI GRCGYC 2 cut(s) 883, 5008
AdeI CACNNNGTG 2 cut(s) 2645, 3239
AfaI GTAC 5 cut(s) 456, 1249, 3331, 3370, 5037
AflIII ACRYGT 3 cut(s) 1380, 2548, 4531
AgeI ACCGGT 1 cut(s) 5570
AhdI GACNNNNNGTC 2 cut(s) 366, 2026
AjiI CACGTC 1 cut(s) 685
AjuI GAANNNNNNNTTGG 6 cut(s) 1513, 1545, 1587, 1619, 3496, 3528
AleI CACNNNNGTG 2 cut(s) 812, 4425
Alw26I GTCTC 6 cut(s) 1096, 2925, 3853, 4028, 4252, 5934
Alw44I GTGCAC 1 cut(s) 783
AlwI GGATC 9 cut(s) 624, 711, 1109, 1122, 1957, 3270, 3436, 4328, 5175
AlwNI CAGNNNCTG 4 cut(s) 289, 3728, 4736, 5915
Ama87I CYCGRG 5 cut(s) 209, 854, 1191, 1860, 5054
ApaI GGGCCC 2 cut(s) 941, 4845
ApaLI GTGCAC 1 cut(s) 783
ApoI RAATTY 6 cut(s) 1000, 1426, 1641, 2261, 4443, 4706
ArsI GACNNNNNNTTYG 4 cut(s) 3186, 3218, 5545, 5577
AseI ATTAAT 2 cut(s) 1818, 3197
AsiGI ACCGGT 1 cut(s) 5570
Asp718I GGTACC 1 cut(s) 3368
AspA2I CCTAGG 3 cut(s) 563, 2621, 3044
AspLEI GCGC 5 cut(s) 294, 414, 1239, 1311, 3477
AsuC2I CCSGG 5 cut(s) 701, 855, 856, 2842, 4594
AsuII TTCGAA 2 cut(s) 1424, 3269
AsuNHI GCTAGC 2 cut(s) 1213, 1217
AvaI CYCGRG 5 cut(s) 209, 854, 1191, 1860, 5054
AvrII CCTAGG 3 cut(s) 563, 2621, 3044
AxyI CCTNAGG 1 cut(s) 6057
BaeGI GKGCMC 6 cut(s) 787, 923, 941, 977, 2416, 4845
BaeI ACNNNNGTAYC 2 cut(s) 3708, 3741
BalI TGGCCA 1 cut(s) 572
BamHI GGATCC 1 cut(s) 1114
BanI GGYRCC 6 cut(s) 918, 972, 2794, 3368, 5140, 6035
BanII GRGCYC 8 cut(s) 941, 1063, 1148, 2693, 2999, 3091, 4400, 4845
BarI GAAGNNNNNNTAC 2 cut(s) 5788, 5820
BbvCI CCTCAGC 1 cut(s) 6000
BceAI ACGGC 5 cut(s) 210, 893, 1413, 2782, 3056
BcgI CGANNNNNNTGC 4 cut(s) 2979, 3013, 5327, 5361
BciVI GTATCC 1 cut(s) 2677
BclI TGATCA 5 cut(s) 1804, 2950, 3316, 4468, 5122
BcnI CCSGG 5 cut(s) 701, 855, 856, 2842, 4594
BcoDI GTCTC 6 cut(s) 1096, 2925, 3853, 4028, 4252, 5934
BfmI CTRYAG 9 cut(s) 147, 1208, 3492, 4002, 4614, 4830, 4989, 5460, 5599
BfoI RGCGCY 1 cut(s) 415
BfuAI ACCTGC 5 cut(s) 1159, 2804, 3460, 4009, 5702
BfuI GTATCC 1 cut(s) 2677
BlnI CCTAGG 3 cut(s) 563, 2621, 3044
BlpI GCTNAGC 2 cut(s) 1629, 4929
BmeRI GACNNNNNGTC 2 cut(s) 366, 2026
BmeT110I CYCGRG 5 cut(s) 209, 854, 1191, 1860, 5054
BmgBI CACGTC 1 cut(s) 685
BmrI ACTGGG 3 cut(s) 1128, 3716, 5770
BmtI GCTAGC 2 cut(s) 1217, 1221
BmuI ACTGGG 3 cut(s) 1128, 3716, 5770
BpmI CTGGAG 7 cut(s) 73, 783, 1080, 1140, 2760, 3105, 5610
Bpu10I CCTNAGC 6 cut(s) 282, 408, 2291, 3552, 5155, 6000
Bpu1102I GCTNAGC 2 cut(s) 1629, 4929
Bpu14I TTCGAA 2 cut(s) 1424, 3269
BpuEI CTTGAG 6 cut(s) 813, 1974, 3774, 3797, 4023, 5055
BpuMI CCSGG 5 cut(s) 701, 855, 856, 2842, 4594
Bsa29I ATCGAT 1 cut(s) 5129
BsaBI GATNNNNATC 4 cut(s) 615, 3354, 3828, 5178
BsaHI GRCGYC 2 cut(s) 883, 5008
BsaWI WCCGGW 3 cut(s) 1272, 5038, 5570
Bse118I RCCGGY 5 cut(s) 585, 1758, 2223, 5353, 5570
Bse21I CCTNAGG 1 cut(s) 6057
Bse3DI GCAATG 2 cut(s) 3122, 3754
Bse8I GATNNNNATC 4 cut(s) 615, 3354, 3828, 5178
BseCI ATCGAT 1 cut(s) 5129
BseJI GATNNNNATC 4 cut(s) 615, 3354, 3828, 5178
BseMI GCAATG 2 cut(s) 3122, 3754
BseRI GAGGAG 8 cut(s) 227, 917, 1137, 1373, 2151, 2402, 3727, 6017
BseSI GKGCMC 6 cut(s) 787, 923, 941, 977, 2416, 4845
BseX3I CGGCCG 1 cut(s) 1398
BseYI CCCAGC 2 cut(s) 1260, 4150
BsgI GTGCAG 4 cut(s) 811, 1904, 2306, 4236
Bsh1236I CGCG 5 cut(s) 1237, 1311, 1706, 3477, 5119
Bsh1285I CGRYCG 2 cut(s) 1315, 1401
BshNI GGYRCC 6 cut(s) 918, 972, 2794, 3368, 5140, 6035
BshTI ACCGGT 1 cut(s) 5570
BshVI ATCGAT 1 cut(s) 5129
BsiEI CGRYCG 2 cut(s) 1315, 1401
BsiHKCI CYCGRG 5 cut(s) 209, 854, 1191, 1860, 5054
BslFI GGGAC 6 cut(s) 17, 699, 1376, 2033, 3485, 3877
BsmAI GTCTC 6 cut(s) 1096, 2925, 3853, 4028, 4252, 5934
BsmFI GGGAC 6 cut(s) 17, 699, 1376, 2033, 3485, 3877
BsmI GAATGC 5 cut(s) 2656, 3301, 4192, 4604, 5757
BsoBI CYCGRG 5 cut(s) 209, 854, 1191, 1860, 5054
Bsp119I TTCGAA 2 cut(s) 1424, 3269
Bsp120I GGGCCC 2 cut(s) 937, 4841
Bsp1720I GCTNAGC 2 cut(s) 1629, 4929
Bsp19I CCATGG 1 cut(s) 5963
BspDI ATCGAT 1 cut(s) 5129
BspFNI CGCG 5 cut(s) 1237, 1311, 1706, 3477, 5119
BspMAI CTGCAG 7 cut(s) 151, 1212, 3496, 4006, 4618, 4834, 5464
BspMI ACCTGC 5 cut(s) 1159, 2804, 3460, 4009, 5702
BspOI GCTAGC 2 cut(s) 1217, 1221
BspPI GGATC 9 cut(s) 624, 711, 1109, 1122, 1957, 3270, 3436, 4328, 5175
BspQI GCTCTTC 1 cut(s) 3465
BspT104I TTCGAA 2 cut(s) 1424, 3269
BspT107I GGYRCC 6 cut(s) 918, 972, 2794, 3368, 5140, 6035
BsrBI CCGCTC 3 cut(s) 208, 907, 2014
BsrDI GCAATG 2 cut(s) 3122, 3754
BsrFI RCCGGY 5 cut(s) 585, 1758, 2223, 5353, 5570
BssAI RCCGGY 5 cut(s) 585, 1758, 2223, 5353, 5570
BssNI GRCGYC 2 cut(s) 883, 5008
BssT1I CCWWGG 8 cut(s) 563, 2621, 2740, 3044, 3582, 5816, 5963, 6086
Bst6I CTCTTC 4 cut(s) 2, 503, 3465, 3777
BstACI GRCGYC 2 cut(s) 883, 5008
BstAPI GCANNNNNTGC 1 cut(s) 4913
BstBI TTCGAA 2 cut(s) 1424, 3269
BstDSI CCRYGG 2 cut(s) 757, 5963
BstEII GGTNACC 2 cut(s) 2625, 3447
BstENI CCTNNNNNAGG 2 cut(s) 6043, 6060
BstFNI CGCG 5 cut(s) 1237, 1311, 1706, 3477, 5119
BstH2I RGCGCY 1 cut(s) 415
BstHHI GCGC 5 cut(s) 294, 414, 1239, 1311, 3477
BstMAI GTCTC 6 cut(s) 1096, 2925, 3853, 4028, 4252, 5934
BstMCI CGRYCG 2 cut(s) 1315, 1401
BstNSI RCATGY 5 cut(s) 355, 455, 1384, 3581, 4535
BstPI GGTNACC 2 cut(s) 2625, 3447
BstSFI CTRYAG 9 cut(s) 147, 1208, 3492, 4002, 4614, 4830, 4989, 5460, 5599
BstSLI GKGCMC 6 cut(s) 787, 923, 941, 977, 2416, 4845
BstUI CGCG 5 cut(s) 1237, 1311, 1706, 3477, 5119
BstX2I RGATCY 5 cut(s) 616, 1114, 3262, 3428, 5167
BstYI RGATCY 5 cut(s) 616, 1114, 3262, 3428, 5167
BstZI CGGCCG 1 cut(s) 1398
Bsu15I ATCGAT 1 cut(s) 5129
Bsu36I CCTNAGG 1 cut(s) 6057
BsuI GTATCC 1 cut(s) 2677
BsuTUI ATCGAT 1 cut(s) 5129
BtgI CCRYGG 2 cut(s) 757, 5963
BtrI CACGTC 1 cut(s) 685
BtsI GCAGTG 4 cut(s) 799, 2362, 5364, 5637
BveI ACCTGC 5 cut(s) 1159, 2804, 3460, 4009, 5702
CaiI CAGNNNCTG 4 cut(s) 289, 3728, 4736, 5915
CfoI GCGC 5 cut(s) 294, 414, 1239, 1311, 3477
Cfr10I RCCGGY 5 cut(s) 585, 1758, 2223, 5353, 5570
Cfr9I CCCGGG 1 cut(s) 854
ClaI ATCGAT 1 cut(s) 5129
CseI GACGC 3 cut(s) 872, 1464, 5016
CsiI ACCWGGT 2 cut(s) 3541, 5788
Csp6I GTAC 5 cut(s) 455, 1248, 3330, 3369, 5036
CspAI ACCGGT 1 cut(s) 5570
CspCI CAANNNNNGTGG 4 cut(s) 818, 853, 2659, 2694
CviQI GTAC 5 cut(s) 455, 1248, 3330, 3369, 5036
DraI TTTAAA 3 cut(s) 2106, 2592, 3412
DraIII CACNNNGTG 2 cut(s) 2645, 3239
DriI GACNNNNNGTC 2 cut(s) 366, 2026
EaeI YGGCCR 7 cut(s) 570, 583, 1398, 1894, 2221, 3663, 4922
EagI CGGCCG 1 cut(s) 1398
Eam1104I CTCTTC 4 cut(s) 2, 503, 3465, 3777
Eam1105I GACNNNNNGTC 2 cut(s) 366, 2026
EarI CTCTTC 4 cut(s) 2, 503, 3465, 3777
EciI GGCGGA 3 cut(s) 695, 783, 1084
Ecl136II GAGCTC 4 cut(s) 1146, 2691, 2997, 3089
EclXI CGGCCG 1 cut(s) 1398
Eco130I CCWWGG 8 cut(s) 563, 2621, 2740, 3044, 3582, 5816, 5963, 6086
Eco24I GRGCYC 8 cut(s) 941, 1063, 1148, 2693, 2999, 3091, 4400, 4845
Eco52I CGGCCG 1 cut(s) 1398
Eco53kI GAGCTC 4 cut(s) 1146, 2691, 2997, 3089
Eco81I CCTNAGG 1 cut(s) 6057
Eco88I CYCGRG 5 cut(s) 209, 854, 1191, 1860, 5054
Eco91I GGTNACC 2 cut(s) 2625, 3447
EcoICRI GAGCTC 4 cut(s) 1146, 2691, 2997, 3089
EcoNI CCTNNNNNAGG 2 cut(s) 6043, 6060
EcoO65I GGTNACC 2 cut(s) 2625, 3447
EcoRI GAATTC 1 cut(s) 1426
EcoT14I CCWWGG 8 cut(s) 563, 2621, 2740, 3044, 3582, 5816, 5963, 6086
EcoT22I ATGCAT 4 cut(s) 1344, 3303, 3579, 4194
EcoT38I GRGCYC 8 cut(s) 941, 1063, 1148, 2693, 2999, 3091, 4400, 4845
ErhI CCWWGG 8 cut(s) 563, 2621, 2740, 3044, 3582, 5816, 5963, 6086
FalI AAGNNNNNCTT 2 cut(s) 1587, 1619
FaqI GGGAC 6 cut(s) 17, 699, 1376, 2033, 3485, 3877
FauI CCCGC 4 cut(s) 213, 1147, 2007, 5428
FauNDI CATATG 1 cut(s) 5824
FbaI TGATCA 5 cut(s) 1804, 2950, 3316, 4468, 5122
FblI GTMKAC 3 cut(s) 2148, 4178, 5598
FriOI GRGCYC 8 cut(s) 941, 1063, 1148, 2693, 2999, 3091, 4400, 4845
GlaI GCGC 5 cut(s) 293, 413, 1238, 1310, 3476
GsaI CCCAGC 2 cut(s) 1264, 4154
GsuI CTGGAG 7 cut(s) 73, 783, 1080, 1140, 2760, 3105, 5610
HaeII RGCGCY 1 cut(s) 415
HgaI GACGC 3 cut(s) 872, 1464, 5016
HhaI GCGC 5 cut(s) 294, 414, 1239, 1311, 3477
Hin1I GRCGYC 2 cut(s) 883, 5008
Hin6I GCGC 5 cut(s) 292, 412, 1237, 1309, 3475
HinP1I GCGC 5 cut(s) 292, 412, 1237, 1309, 3475
HincII GTYRAC 4 cut(s) 1386, 3382, 5188, 5256
HindII GTYRAC 4 cut(s) 1386, 3382, 5188, 5256
HindIII AAGCTT 3 cut(s) 1601, 1727, 2732
HpaI GTTAAC 1 cut(s) 3382
Hpy99I CGWCG 1 cut(s) 196
HpyCH4IV ACGT 5 cut(s) 94, 367, 684, 2548, 5705
HpySE526I ACGT 5 cut(s) 94, 367, 684, 2548, 5705
Hsp92I GRCGYC 2 cut(s) 883, 5008
HspAI GCGC 5 cut(s) 292, 412, 1237, 1309, 3475
KpnI GGTACC 1 cut(s) 3372
KroI GCCGGC 2 cut(s) 585, 1758
KroNI GCCGGC 2 cut(s) 587, 1760
Ksp22I TGATCA 5 cut(s) 1804, 2950, 3316, 4468, 5122
KspAI GTTAAC 1 cut(s) 3382
LguI GCTCTTC 1 cut(s) 3465
MabI ACCWGGT 2 cut(s) 3541, 5788
MaeII ACGT 5 cut(s) 94, 367, 684, 2548, 5705
MbiI CCGCTC 3 cut(s) 208, 907, 2014
MfeI CAATTG 3 cut(s) 471, 3915, 5529
MflI RGATCY 5 cut(s) 616, 1114, 3262, 3428, 5167
MlsI TGGCCA 1 cut(s) 572
MluNI TGGCCA 1 cut(s) 572
MlyI GAGTC 9 cut(s) 355, 1381, 2144, 3398, 3768, 3937, 4030, 4035, 4208
MmeI TCCRAC 9 cut(s) 254, 629, 1031, 1121, 3607, 3719, 4137, 4871, 5832
Mox20I TGGCCA 1 cut(s) 572
Mph1103I ATGCAT 4 cut(s) 1344, 3303, 3579, 4194
MroNI GCCGGC 2 cut(s) 585, 1758
MscI TGGCCA 1 cut(s) 572
MslI CAYNNNNRTG 7 cut(s) 356, 812, 1662, 2661, 4187, 4425, 4738
Msp20I TGGCCA 1 cut(s) 572
MspA1I CMGCKG 6 cut(s) 1178, 3668, 4634, 4928, 4994, 5480
MunI CAATTG 3 cut(s) 471, 3915, 5529
Mva1269I GAATGC 5 cut(s) 2656, 3301, 4192, 4604, 5757
MvnI CGCG 5 cut(s) 1237, 1311, 1706, 3477, 5119
NaeI GCCGGC 2 cut(s) 587, 1760
NciI CCSGG 5 cut(s) 701, 855, 856, 2842, 4594
NcoI CCATGG 1 cut(s) 5963
NdeI CATATG 1 cut(s) 5824
NgoMIV GCCGGC 2 cut(s) 585, 1758
NheI GCTAGC 2 cut(s) 1213, 1217
NmuCI GTSAC 9 cut(s) 115, 873, 2081, 2372, 2799, 2860, 3447, 3940, 5482
NsiI ATGCAT 4 cut(s) 1344, 3303, 3579, 4194
NspI RCATGY 5 cut(s) 355, 455, 1384, 3581, 4535
NspV TTCGAA 2 cut(s) 1424, 3269
OliI CACNNNNGTG 2 cut(s) 812, 4425
PaeI GCATGC 1 cut(s) 3581
PaeR7I CTCGAG 3 cut(s) 209, 1860, 5054
PaqCI CACCTGC 4 cut(s) 1159, 3460, 4009, 5702
PciI ACATGT 2 cut(s) 1380, 4531
PciSI GCTCTTC 1 cut(s) 3465
PcsI WCGNNNNNNNCGW 1 cut(s) 5196
PctI GAATGC 5 cut(s) 2656, 3301, 4192, 4604, 5757
PdiI GCCGGC 2 cut(s) 587, 1760
PflFI GACNNNGTC 1 cut(s) 1088
PflMI CCANNNNNTGG 2 cut(s) 1140, 5510
PfoI TCCNGGA 2 cut(s) 1117, 2840
PinAI ACCGGT 1 cut(s) 5570
Ple19I CGATCG 1 cut(s) 1315
PleI GAGTC 9 cut(s) 355, 1380, 2144, 3397, 3767, 3937, 4030, 4034, 4207
PpsI GAGTC 9 cut(s) 355, 1380, 2144, 3397, 3767, 3937, 4030, 4034, 4207
PpuMI RGGWCCY 3 cut(s) 3781, 5561, 5786
PscI ACATGT 2 cut(s) 1380, 4531
PshBI ATTAAT 2 cut(s) 1818, 3197
Psp124BI GAGCTC 4 cut(s) 1148, 2693, 2999, 3091
Psp5II RGGWCCY 3 cut(s) 3781, 5561, 5786
PspEI GGTNACC 2 cut(s) 2625, 3447
PspFI CCCAGC 2 cut(s) 1260, 4150
PspOMI GGGCCC 2 cut(s) 937, 4841
PspPPI RGGWCCY 3 cut(s) 3781, 5561, 5786
PspXI VCTCGAGB 2 cut(s) 209, 1860
PsrI GAACNNNNNNTAC 2 cut(s) 5820, 5852
PstI CTGCAG 7 cut(s) 151, 1212, 3496, 4006, 4618, 4834, 5464
PstNI CAGNNNCTG 4 cut(s) 289, 3728, 4736, 5915
PsuI RGATCY 5 cut(s) 616, 1114, 3262, 3428, 5167
PsyI GACNNNGTC 1 cut(s) 1088
PvuI CGATCG 1 cut(s) 1315
PvuII CAGCTG 3 cut(s) 4928, 4994, 5480
RsaI GTAC 5 cut(s) 456, 1249, 3331, 3370, 5037
RsaNI GTAC 5 cut(s) 455, 1248, 3330, 3369, 5036
RseI CAYNNNNRTG 7 cut(s) 356, 812, 1662, 2661, 4187, 4425, 4738
SacI GAGCTC 4 cut(s) 1148, 2693, 2999, 3091
SapI GCTCTTC 1 cut(s) 3465
SchI GAGTC 9 cut(s) 355, 1381, 2144, 3398, 3768, 3937, 4030, 4035, 4208
SexAI ACCWGGT 2 cut(s) 3541, 5788
SfcI CTRYAG 9 cut(s) 147, 1208, 3492, 4002, 4614, 4830, 4989, 5460, 5599
Sfr274I CTCGAG 3 cut(s) 209, 1860, 5054
SfuI TTCGAA 2 cut(s) 1424, 3269
SlaI CTCGAG 3 cut(s) 209, 1860, 5054
SmaI CCCGGG 1 cut(s) 856
SmiMI CAYNNNNRTG 7 cut(s) 356, 812, 1662, 2661, 4187, 4425, 4738
SmlI CTYRAG 9 cut(s) 209, 828, 1860, 1989, 3776, 3789, 4038, 5054, 5070
SmoI CTYRAG 9 cut(s) 209, 828, 1860, 1989, 3776, 3789, 4038, 5054, 5070
SphI GCATGC 1 cut(s) 3581
SspI AATATT 3 cut(s) 2752, 4972, 5227
SstI GAGCTC 4 cut(s) 1148, 2693, 2999, 3091
StyI CCWWGG 8 cut(s) 563, 2621, 2740, 3044, 3582, 5816, 5963, 6086
TaiI ACGT 5 cut(s) 97, 370, 687, 2551, 5708
TatI WGTACW 1 cut(s) 454
TseFI GTSAC 9 cut(s) 115, 873, 2081, 2372, 2799, 2860, 3447, 3940, 5482
Tsp45I GTSAC 9 cut(s) 115, 873, 2081, 2372, 2799, 2860, 3447, 3940, 5482
TspGWI ACGGA 4 cut(s) 1384, 1467, 2461, 5759
TspMI CCCGGG 1 cut(s) 854
Tth111I GACNNNGTC 1 cut(s) 1088
Van91I CCANNNNNTGG 2 cut(s) 1140, 5510
VneI GTGCAC 1 cut(s) 783
VspI ATTAAT 2 cut(s) 1818, 3197
XagI CCTNNNNNAGG 2 cut(s) 6043, 6060
XapI RAATTY 6 cut(s) 1000, 1426, 1641, 2261, 4443, 4706
XceI RCATGY 5 cut(s) 355, 455, 1384, 3581, 4535
XcmI CCANNNNNNNNNTGG 2 cut(s) 1002, 1276
XhoI CTCGAG 3 cut(s) 209, 1860, 5054
XmaI CCCGGG 1 cut(s) 854
XmaJI CCTAGG 3 cut(s) 563, 2621, 3044
XmiI GTMKAC 3 cut(s) 2148, 4178, 5598
Zsp2I ATGCAT 4 cut(s) 1344, 3303, 3579, 4194
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.