TFIIS helical bundle-like domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G48050 AT3G48050 AT3G48060 AT3G48060 AT3G48060 |
| fragaria_vesca | FvH4_5g16640 FvH4_5g16640 FvH4_5g16640 FvH4_5g16640 |
| malus_domestica | MD06G1178400.v1.1 MD14G1184800.v1.1 |
| prunus_persica | Prupe.5G177500_v2.0.a1 Prupe.5G177500_v2.0.a1 |
| pyrus_communis | pycom06g15860 pycom14g15380 |
| rosa_chinensis | RchiOBHm_Chr7g0179511 |
| rosa_laevigata | RLG00000005348 |
| rosa_multiflora | Rmu_sc0000735.1_g000008 |
| rosa_roxburghii | Rroxscaffold_3G00273930 |
| rosa_rugosa | Rorug06G0424900 Rorug06G0424900 Rorug06G0425000.1 |
| rosa_samantha | Rh7AG024900 Rh7BG024100 Rh7CG025500 Rh7DG025300 |
| rosa_wichuraiana | Rw7G002000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 2663, 3446 |
| AccB1I | GGYRCC | 1 cut(s) | 3691 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 590, 1910 |
| AccBSI | CCGCTC | 3 cut(s) | 688, 4126, 4650 |
| AccI | GTMKAC | 1 cut(s) | 763 |
| AccII | CGCG | 3 cut(s) | 61, 535, 1224 |
| AclWI | GGATC | 7 cut(s) | 1326, 1339, 1453, 1949, 2128, 3188, 3775 |
| AcoI | YGGCCR | 3 cut(s) | 72, 895, 3791 |
| AcsI | RAATTY | 8 cut(s) | 315, 935, 1179, 1246, 2611, 2971, 3319, 3915 |
| AcuI | CTGAAG | 9 cut(s) | 849, 1317, 1374, 2181, 2334, 3146, 3608, 3666, 4956 |
| AcyI | GRCGYC | 2 cut(s) | 288, 3874 |
| AdeI | CACNNNGTG | 1 cut(s) | 1931 |
| AflIII | ACRYGT | 3 cut(s) | 42, 59, 1222 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 4205 |
| AhlI | ACTAGT | 2 cut(s) | 3833, 4442 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 101, 133, 187, 219, 261, 293 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 738, 770 |
| Alw21I | GWGCWC | 5 cut(s) | 157, 1358, 1661, 2423, 4751 |
| Alw26I | GTCTC | 5 cut(s) | 1273, 2490, 2681, 3028, 4380 |
| Alw44I | GTGCAC | 1 cut(s) | 153 |
| AlwI | GGATC | 7 cut(s) | 1326, 1339, 1453, 1949, 2128, 3188, 3775 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1742, 4793 |
| Ama87I | CYCGRG | 1 cut(s) | 2493 |
| ApaI | GGGCCC | 1 cut(s) | 3714 |
| ApaLI | GTGCAC | 1 cut(s) | 153 |
| ApoI | RAATTY | 8 cut(s) | 315, 935, 1179, 1246, 2611, 2971, 3319, 3915 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 3360, 3915 |
| AspLEI | GCGC | 2 cut(s) | 307, 3997 |
| AsuC2I | CCSGG | 2 cut(s) | 1443, 2426 |
| AsuHPI | GGTGA | 9 cut(s) | 29, 1034, 1455, 2192, 2463, 2783, 3365, 4754, 4821 |
| AsuNHI | GCTAGC | 1 cut(s) | 2360 |
| AvaI | CYCGRG | 1 cut(s) | 2493 |
| BaeGI | GKGCMC | 3 cut(s) | 157, 1090, 3714 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 48, 81, 2412, 2445 |
| BamHI | GGATCC | 1 cut(s) | 1331 |
| BanI | GGYRCC | 1 cut(s) | 3691 |
| BanII | GRGCYC | 4 cut(s) | 704, 1358, 1661, 3714 |
| BauI | CACGAG | 1 cut(s) | 4966 |
| BbsI | GAAGAC | 3 cut(s) | 93, 2172, 4163 |
| Bbv12I | GWGCWC | 5 cut(s) | 157, 1358, 1661, 2423, 4751 |
| BbvCI | CCTCAGC | 3 cut(s) | 1869, 4573, 4878 |
| BceAI | ACGGC | 1 cut(s) | 4859 |
| BciVI | GTATCC | 4 cut(s) | 76, 1387, 2669, 3728 |
| BclI | TGATCA | 6 cut(s) | 478, 1612, 2008, 3292, 3343, 4000 |
| BcnI | CCSGG | 2 cut(s) | 1443, 2426 |
| BcoDI | GTCTC | 5 cut(s) | 1273, 2490, 2681, 3028, 4380 |
| BcuI | ACTAGT | 2 cut(s) | 3833, 4442 |
| BfuAI | ACCTGC | 2 cut(s) | 2663, 3446 |
| BfuI | GTATCC | 4 cut(s) | 76, 1387, 2669, 3728 |
| BglII | AGATCT | 1 cut(s) | 4777 |
| BlpI | GCTNAGC | 1 cut(s) | 2716 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 4205 |
| BmeT110I | CYCGRG | 1 cut(s) | 2493 |
| BmtI | GCTAGC | 1 cut(s) | 2364 |
| BoxI | GACNNNNGTC | 2 cut(s) | 2502, 3159 |
| BpiI | GAAGAC | 3 cut(s) | 93, 2172, 4163 |
| BpmI | CTGGAG | 7 cut(s) | 1647, 1773, 1794, 2394, 4317, 4485, 4815 |
| Bpu10I | CCTNAGC | 4 cut(s) | 1869, 4033, 4573, 4878 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2716 |
| BpuEI | CTTGAG | 6 cut(s) | 648, 950, 3869, 3921, 3933, 3941 |
| BpuMI | CCSGG | 2 cut(s) | 1443, 2426 |
| BsaAI | YACGTR | 1 cut(s) | 4344 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1450, 2046 |
| BsaHI | GRCGYC | 2 cut(s) | 288, 3874 |
| BsaI | GGTCTC | 2 cut(s) | 2681, 4380 |
| BsaXI | ACNNNNNCTCC | 9 cut(s) | 31, 738, 768, 804, 834, 1401, 1431, 2392, 2422 |
| Bse118I | RCCGGY | 2 cut(s) | 432, 897 |
| Bse3DI | GCAATG | 1 cut(s) | 2458 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1450, 2046 |
| BseJI | GATNNNNATC | 2 cut(s) | 1450, 2046 |
| BseMI | GCAATG | 1 cut(s) | 2458 |
| BseRI | GAGGAG | 8 cut(s) | 35, 1076, 1669, 3026, 3329, 3924, 4226, 4895 |
| BseSI | GKGCMC | 3 cut(s) | 157, 1090, 3714 |
| BseYI | CCCAGC | 3 cut(s) | 3212, 3826, 4622 |
| BsgI | GTGCAG | 3 cut(s) | 578, 980, 1908 |
| Bsh1236I | CGCG | 3 cut(s) | 61, 535, 1224 |
| BshNI | GGYRCC | 1 cut(s) | 3691 |
| BsiHKAI | GWGCWC | 5 cut(s) | 157, 1358, 1661, 2423, 4751 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2493 |
| BsiSI | CCGG | 6 cut(s) | 433, 898, 1262, 1442, 2426, 3790 |
| BslFI | GGGAC | 8 cut(s) | 38, 707, 1486, 2125, 2192, 2380, 2743, 4422 |
| BsmAI | GTCTC | 5 cut(s) | 1273, 2490, 2681, 3028, 4380 |
| BsmBI | CGTCTC | 1 cut(s) | 2490 |
| BsmFI | GGGAC | 8 cut(s) | 38, 707, 1486, 2125, 2192, 2380, 2743, 4422 |
| BsmI | GAATGC | 4 cut(s) | 380, 1321, 2826, 3785 |
| Bso31I | GGTCTC | 2 cut(s) | 2681, 4380 |
| BsoBI | CYCGRG | 1 cut(s) | 2493 |
| Bsp120I | GGGCCC | 1 cut(s) | 3710 |
| Bsp1286I | GDGCHC | 8 cut(s) | 157, 704, 1090, 1358, 1661, 2423, 3714, 4751 |
| Bsp1407I | TGTACA | 2 cut(s) | 525, 3467 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2716 |
| BspFNI | CGCG | 3 cut(s) | 61, 535, 1224 |
| BspMAI | CTGCAG | 5 cut(s) | 2674, 3484, 3508, 3703, 4354 |
| BspMI | ACCTGC | 2 cut(s) | 2663, 3446 |
| BspOI | GCTAGC | 1 cut(s) | 2364 |
| BspPI | GGATC | 7 cut(s) | 1326, 1339, 1453, 1949, 2128, 3188, 3775 |
| BspQI | GCTCTTC | 3 cut(s) | 1346, 1708, 3627 |
| BspT107I | GGYRCC | 1 cut(s) | 3691 |
| BspTNI | GGTCTC | 2 cut(s) | 2681, 4380 |
| BsrBI | CCGCTC | 3 cut(s) | 688, 4126, 4650 |
| BsrDI | GCAATG | 1 cut(s) | 2458 |
| BsrFI | RCCGGY | 2 cut(s) | 432, 897 |
| BsrGI | TGTACA | 2 cut(s) | 525, 3467 |
| BssAI | RCCGGY | 2 cut(s) | 432, 897 |
| BssNI | GRCGYC | 2 cut(s) | 288, 3874 |
| BssSI | CACGAG | 1 cut(s) | 4966 |
| BssT1I | CCWWGG | 4 cut(s) | 1135, 1405, 1550, 4694 |
| Bst2BI | CACGAG | 1 cut(s) | 4966 |
| Bst6I | CTCTTC | 4 cut(s) | 1346, 1708, 3627, 3734 |
| BstACI | GRCGYC | 2 cut(s) | 288, 3874 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 386, 3782, 4107 |
| BstAUI | TGTACA | 2 cut(s) | 525, 3467 |
| BstBAI | YACGTR | 1 cut(s) | 4344 |
| BstDSI | CCRYGG | 3 cut(s) | 69, 1909, 4841 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 4877, 4938 |
| BstFNI | CGCG | 3 cut(s) | 61, 535, 1224 |
| BstHHI | GCGC | 2 cut(s) | 307, 3997 |
| BstMAI | GTCTC | 5 cut(s) | 1273, 2490, 2681, 3028, 4380 |
| BstNSI | RCATGY | 5 cut(s) | 46, 551, 2285, 3311, 4889 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 2502, 3159 |
| BstSLI | GKGCMC | 3 cut(s) | 157, 1090, 3714 |
| BstSNI | TACGTA | 1 cut(s) | 4344 |
| BstUI | CGCG | 3 cut(s) | 61, 535, 1224 |
| BstV2I | GAAGAC | 3 cut(s) | 93, 2172, 4163 |
| BstX2I | RGATCY | 5 cut(s) | 1331, 1445, 1954, 2120, 4777 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1996 |
| BstYI | RGATCY | 5 cut(s) | 1331, 1445, 1954, 2120, 4777 |
| BsuI | GTATCC | 4 cut(s) | 76, 1387, 2669, 3728 |
| BtgI | CCRYGG | 3 cut(s) | 69, 1909, 4841 |
| BtgZI | GCGATG | 1 cut(s) | 2148 |
| BtsI | GCAGTG | 5 cut(s) | 1942, 2910, 3004, 4239, 4264 |
| BveI | ACCTGC | 2 cut(s) | 2663, 3446 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1742, 4793 |
| CfoI | GCGC | 2 cut(s) | 307, 3997 |
| Cfr10I | RCCGGY | 2 cut(s) | 432, 897 |
| CseI | GACGC | 4 cut(s) | 277, 1171, 1923, 3882 |
| CsiI | ACCWGGT | 1 cut(s) | 4666 |
| CspCI | CAANNNNNGTGG | 3 cut(s) | 1324, 1359, 4949 |
| DraI | TTTAAA | 3 cut(s) | 780, 2104, 3030 |
| DraIII | CACNNNGTG | 1 cut(s) | 1931 |
| DriI | GACNNNNNGTC | 1 cut(s) | 4205 |
| EaeI | YGGCCR | 3 cut(s) | 72, 895, 3791 |
| Eam1104I | CTCTTC | 4 cut(s) | 1346, 1708, 3627, 3734 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 4205 |
| EarI | CTCTTC | 4 cut(s) | 1346, 1708, 3627, 3734 |
| EciI | GGCGGA | 1 cut(s) | 1344 |
| Ecl136II | GAGCTC | 2 cut(s) | 1356, 1659 |
| Eco105I | TACGTA | 1 cut(s) | 4344 |
| Eco130I | CCWWGG | 4 cut(s) | 1135, 1405, 1550, 4694 |
| Eco24I | GRGCYC | 4 cut(s) | 704, 1358, 1661, 3714 |
| Eco31I | GGTCTC | 2 cut(s) | 2681, 4380 |
| Eco32I | GATATC | 1 cut(s) | 1692 |
| Eco53kI | GAGCTC | 2 cut(s) | 1356, 1659 |
| Eco57I | CTGAAG | 9 cut(s) | 849, 1317, 1374, 2181, 2334, 3146, 3608, 3666, 4956 |
| Eco88I | CYCGRG | 1 cut(s) | 2493 |
| EcoICRI | GAGCTC | 2 cut(s) | 1356, 1659 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 4877, 4938 |
| EcoRI | GAATTC | 2 cut(s) | 2611, 3915 |
| EcoRV | GATATC | 1 cut(s) | 1692 |
| EcoT14I | CCWWGG | 4 cut(s) | 1135, 1405, 1550, 4694 |
| EcoT22I | ATGCAT | 4 cut(s) | 6, 549, 2283, 2287 |
| EcoT38I | GRGCYC | 4 cut(s) | 704, 1358, 1661, 3714 |
| ErhI | CCWWGG | 4 cut(s) | 1135, 1405, 1550, 4694 |
| Esp3I | CGTCTC | 1 cut(s) | 2490 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 801, 833, 4155, 4187 |
| FaqI | GGGAC | 8 cut(s) | 38, 707, 1486, 2125, 2192, 2380, 2743, 4422 |
| FauI | CCCGC | 5 cut(s) | 681, 2152, 3685, 3729, 4131 |
| FbaI | TGATCA | 6 cut(s) | 478, 1612, 2008, 3292, 3343, 4000 |
| FblI | GTMKAC | 1 cut(s) | 763 |
| FriOI | GRGCYC | 4 cut(s) | 704, 1358, 1661, 3714 |
| GlaI | GCGC | 2 cut(s) | 306, 3996 |
| GsaI | CCCAGC | 3 cut(s) | 3216, 3830, 4626 |
| GsuI | CTGGAG | 7 cut(s) | 1647, 1773, 1794, 2394, 4317, 4485, 4815 |
| HapII | CCGG | 6 cut(s) | 433, 898, 1262, 1442, 2426, 3790 |
| HgaI | GACGC | 4 cut(s) | 277, 1171, 1923, 3882 |
| HhaI | GCGC | 2 cut(s) | 307, 3997 |
| Hin1I | GRCGYC | 2 cut(s) | 288, 3874 |
| Hin6I | GCGC | 2 cut(s) | 305, 3995 |
| HinP1I | GCGC | 2 cut(s) | 305, 3995 |
| HincII | GTYRAC | 2 cut(s) | 48, 3435 |
| HindII | GTYRAC | 2 cut(s) | 48, 3435 |
| HindIII | AAGCTT | 3 cut(s) | 275, 1299, 1397 |
| HpaII | CCGG | 6 cut(s) | 433, 898, 1262, 1442, 2426, 3790 |
| HphI | GGTGA | 9 cut(s) | 29, 1034, 1455, 2192, 2463, 2783, 3365, 4754, 4821 |
| HpyCH4IV | ACGT | 4 cut(s) | 130, 724, 2977, 4343 |
| HpySE526I | ACGT | 4 cut(s) | 130, 724, 2977, 4343 |
| Hsp92I | GRCGYC | 2 cut(s) | 288, 3874 |
| HspAI | GCGC | 2 cut(s) | 305, 3995 |
| KflI | GGGWCCC | 2 cut(s) | 2139, 4436 |
| KroI | GCCGGC | 1 cut(s) | 432 |
| KroNI | GCCGGC | 1 cut(s) | 434 |
| Ksp22I | TGATCA | 6 cut(s) | 478, 1612, 2008, 3292, 3343, 4000 |
| LguI | GCTCTTC | 3 cut(s) | 1346, 1708, 3627 |
| MabI | ACCWGGT | 1 cut(s) | 4666 |
| MaeII | ACGT | 4 cut(s) | 130, 724, 2977, 4343 |
| MbiI | CCGCTC | 3 cut(s) | 688, 4126, 4650 |
| MfeI | CAATTG | 4 cut(s) | 518, 1994, 4401, 4655 |
| MflI | RGATCY | 5 cut(s) | 1331, 1445, 1954, 2120, 4777 |
| MhlI | GDGCHC | 8 cut(s) | 157, 704, 1090, 1358, 1661, 2423, 3714, 4751 |
| MluI | ACGCGT | 2 cut(s) | 59, 1222 |
| MlyI | GAGTC | 3 cut(s) | 2090, 2402, 2472 |
| MmeI | TCCRAC | 4 cut(s) | 276, 620, 2311, 3740 |
| Mph1103I | ATGCAT | 4 cut(s) | 6, 549, 2283, 2287 |
| MroNI | GCCGGC | 1 cut(s) | 432 |
| MroXI | GAANNNNTTC | 2 cut(s) | 3360, 3915 |
| MslI | CAYNNNNRTG | 3 cut(s) | 336, 3300, 3607 |
| MspA1I | CMGCKG | 6 cut(s) | 1032, 2147, 3008, 3797, 3860, 4577 |
| MspI | CCGG | 6 cut(s) | 433, 898, 1262, 1442, 2426, 3790 |
| MunI | CAATTG | 4 cut(s) | 518, 1994, 4401, 4655 |
| Mva1269I | GAATGC | 4 cut(s) | 380, 1321, 2826, 3785 |
| MvnI | CGCG | 3 cut(s) | 61, 535, 1224 |
| NaeI | GCCGGC | 1 cut(s) | 434 |
| NciI | CCSGG | 2 cut(s) | 1443, 2426 |
| NgoMIV | GCCGGC | 1 cut(s) | 432 |
| NheI | GCTAGC | 1 cut(s) | 2360 |
| NmuCI | GTSAC | 5 cut(s) | 1360, 1522, 1880, 2180, 4822 |
| NsiI | ATGCAT | 4 cut(s) | 6, 549, 2283, 2287 |
| NspI | RCATGY | 5 cut(s) | 46, 551, 2285, 3311, 4889 |
| PaeI | GCATGC | 2 cut(s) | 551, 2285 |
| PaeR7I | CTCGAG | 1 cut(s) | 2493 |
| PciI | ACATGT | 1 cut(s) | 42 |
| PciSI | GCTCTTC | 3 cut(s) | 1346, 1708, 3627 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 110 |
| PctI | GAATGC | 4 cut(s) | 380, 1321, 2826, 3785 |
| PdiI | GCCGGC | 1 cut(s) | 434 |
| PdmI | GAANNNNTTC | 2 cut(s) | 3360, 3915 |
| PflFI | GACNNNGTC | 1 cut(s) | 1917 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 590, 1910 |
| PfoI | TCCNGGA | 2 cut(s) | 1441, 3419 |
| PleI | GAGTC | 3 cut(s) | 2089, 2401, 2471 |
| PpsI | GAGTC | 3 cut(s) | 2089, 2401, 2471 |
| Ppu21I | YACGTR | 1 cut(s) | 4344 |
| PpuMI | RGGWCCY | 6 cut(s) | 2139, 2626, 3730, 3941, 4436, 4664 |
| PscI | ACATGT | 1 cut(s) | 42 |
| PshAI | GACNNNNGTC | 2 cut(s) | 2502, 3159 |
| Psp124BI | GAGCTC | 2 cut(s) | 1358, 1661 |
| Psp5II | RGGWCCY | 6 cut(s) | 2139, 2626, 3730, 3941, 4436, 4664 |
| PspFI | CCCAGC | 3 cut(s) | 3212, 3826, 4622 |
| PspOMI | GGGCCC | 1 cut(s) | 3710 |
| PspPPI | RGGWCCY | 6 cut(s) | 2139, 2626, 3730, 3941, 4436, 4664 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2650, 2682 |
| PstI | CTGCAG | 5 cut(s) | 2674, 3484, 3508, 3703, 4354 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1742, 4793 |
| PsuI | RGATCY | 5 cut(s) | 1331, 1445, 1954, 2120, 4777 |
| PsyI | GACNNNGTC | 1 cut(s) | 1917 |
| PvuII | CAGCTG | 3 cut(s) | 3797, 3860, 4577 |
| RseI | CAYNNNNRTG | 3 cut(s) | 336, 3300, 3607 |
| SacI | GAGCTC | 2 cut(s) | 1358, 1661 |
| SapI | GCTCTTC | 3 cut(s) | 1346, 1708, 3627 |
| SchI | GAGTC | 3 cut(s) | 2090, 2402, 2472 |
| SduI | GDGCHC | 8 cut(s) | 157, 704, 1090, 1358, 1661, 2423, 3714, 4751 |
| SexAI | ACCWGGT | 1 cut(s) | 4666 |
| Sfr274I | CTCGAG | 1 cut(s) | 2493 |
| SlaI | CTCGAG | 1 cut(s) | 2493 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 336, 3300, 3607 |
| SmlI | CTYRAG | 7 cut(s) | 663, 965, 2493, 3848, 3920, 3936, 3948 |
| SmoI | CTYRAG | 7 cut(s) | 663, 965, 2493, 3848, 3920, 3936, 3948 |
| SnaBI | TACGTA | 1 cut(s) | 4344 |
| SpeI | ACTAGT | 2 cut(s) | 3833, 4442 |
| SphI | GCATGC | 2 cut(s) | 551, 2285 |
| SstI | GAGCTC | 2 cut(s) | 1358, 1661 |
| StyI | CCWWGG | 4 cut(s) | 1135, 1405, 1550, 4694 |
| TaiI | ACGT | 4 cut(s) | 133, 727, 2980, 4346 |
| TaqI | TCGA | 6 cut(s) | 259, 571, 2050, 2494, 3259, 4209 |
| TatI | WGTACW | 3 cut(s) | 525, 2110, 3467 |
| TauI | GCSGC | 1 cut(s) | 353 |
| TseFI | GTSAC | 5 cut(s) | 1360, 1522, 1880, 2180, 4822 |
| Tsp45I | GTSAC | 5 cut(s) | 1360, 1522, 1880, 2180, 4822 |
| TspGWI | ACGGA | 6 cut(s) | 58, 141, 357, 396, 1174, 4212 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1917 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 590, 1910 |
| VneI | GTGCAC | 1 cut(s) | 153 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 4877, 4938 |
| XapI | RAATTY | 8 cut(s) | 315, 935, 1179, 1246, 2611, 2971, 3319, 3915 |
| XbaI | TCTAGA | 1 cut(s) | 3814 |
| XceI | RCATGY | 5 cut(s) | 46, 551, 2285, 3311, 4889 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 4907 |
| XhoI | CTCGAG | 1 cut(s) | 2493 |
| XmiI | GTMKAC | 1 cut(s) | 763 |
| XmnI | GAANNNNTTC | 2 cut(s) | 3360, 3915 |
| Zsp2I | ATGCAT | 4 cut(s) | 6, 549, 2283, 2287 |