MD14G1184800.v1.1

TFIIS helical bundle-like domain

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
Physical Location & Seq
Reverse (-)
27714970 .. 27722567
7598 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1184800.v1.1.491

Sequence Viewer

Length: 4839 bp
ATGCATGGGAGGGGAAGTGAGGAGAGGAAACGGAGTTGGCACATGTTGAAAGTCCCCACGCGTGTATGCGTGGCCAATGGTTCTTCTTCATCACCCTCGTCTTTACCCAATTCGTTTTTCAAGGACGGGCGTAAGATCAGTGTTGGCGATTGTGCTCTTTTCAAACCACCCCAGGATTCTCCACCCTTCATTGGAATAATTCGTTGTGTGACTACAGGCAGAGAGAAGAAGTTAAAATTAGGTGTTAATTGGCTTTATCGACCTTCTGAAATAAAGCTTGGCAAAGGCATCTTGTTGGATGCTGCGCTGAATGAAATTTTTTATTCCTTTCATAAGGATGAGATACCTGCCGCATCGTTACTTCATCCGTGTAAAGTCGCGTTCCTTCCTAAAGGTGTTGATCTTCCGTCAGGGATTTCATCTTTTGTGTGCCGGCGTGTTTATGACATCACAAATAATTGTTTATGGTGGCTAACTGATCAGGACTTTATTAATGAGCGACAAGAGGAAGTAGATCAATTGTTGTATAAAACTCAAGTAGAAATGCATGCAACTGTGCAGTCTGGTGGCCGATCCCCAAAACCATTGAATGGTCCAACATCAGCATCACAGTTAAAAGTTGTGTCAGATGGTGTCCAGAATAGTGGCTCATCTTTTTCCTCTTTAGTTAAGGGGAAGAAAAGGGAGCGGGGAGATCAAGGATCTGAGCCTGTCAAACGAGAACGCACTATGAAAACAGATTATGGGGATTCTGGCAGCTTTAGACAGGAAACCACTTTAAAATCTGAAATTGCCAAAATAACAGAAAAAGGAGGCCTTTTAGATTCTGAAGGGGTTGAGAAATTGCTGCAGCTCATGATACCTGATGAAAATGAGAAAAAAATAGACTTGGCTGGCCGGTTAATGCTTGCTAATGTCATAGCAGCCACAGATAAATTTGATTGCCTTAGTCAATTTGTACTCAAGGGTGTGCCAGTATTCGATGAATGGATCCAAGAGGTTGGACATAAAGGGAAGATAGGTGATGGGAATGGACCCAAAGATAGCGATAAATCTATTGAGGAGTTTCTCTTGGTTTTACTTCGGGCACTGGATAAGCTGCCTGTTAATCTTGAAGCTCTGCAAATGTGTAACATTGGAAAGTCTGTAAATCACTTACGGACGCATAAGAACTTGGAAATCCAGAAGAAAGTAAGAAGCTTAGTTGATAAATGGAAGAAACGAGTTGAAGCTGAAATGGATGCAAAGTCTAATTCAAATGCGGCTGTCTCCTGGTCTGCAAGACCACGCTTCCCAGAAGTTTCTCATGGTGGAAACAGGCATTCTGGTGGATCTGTTGATGTTGCCGTGAAGAGCTCAGTCACACAGCTCTCCATATCCAAATCTGCTTCAGTTAAGCTTGTCCATGGAGATGGTATTACCAAATCTGCTTCAGTATCACCGGGATCTTTGAAATCAGTTCCCTCACCAGTGTCAGCAAGTTCTAACTTAAAAGATGGACTGCCTCGAGTTGTTGCTGTTGGCGTCACAGTTGATCTTCCTTCGACAACTCCAAGGGATGAGAAAAGTAGCAGTTCTAGTCAATCTCACAACAACAGTCAGTCGTGTTCGAATGATCATGCAAGAACTGGAGGTATTTCTGGGAAAGAGGATGCGAGGAGCTCTACTGCTGGTTCAATGAATGTTAAGGTATCAGGTGGCTCTTCCCGACCTCGGAAATCAACAAATGGCTTCCCAGGCTCTGCTCTTTCTGTAGTTCAAAGGGAAACTTTGTCAAGCAGAAGTTCATCTTTGCACAAGAATCCAGTTCCAGAAAAATCATCACAGCCTGGATTGACGAGTGAAAAGGTACTAGATGGACCTTCTGCTGAGGGAAATGGACCCAAGTTGATTGTTAAGATTCCAAATTGTGGTCGCAGTCCTGCACAAAGTGGCAGTGGAGGTTCGTCTGAAGATCCTTTAAATACTATTAGCAGAGCTGCTTCTCCCATGCAAAAGGTTGAAGCTTATCGAGCCACTGTTACCTCAGATGTGAACAACGAATCATGGCAAAGTAATGATTTCAAGGATGTACTGACTGGATCGGATGAGGGTGATGGATCCCCGGCTGCTGTTACTGATGAAGAGCATGATAGGCCCGGTGACGACTCTAAGAAGATTGCCGAAGTCCCAAAAGCTGCTTCCTCGTCATCTGGGAACGAAAAGTCGGGGAATTTGCAGGATGCTTCTTTCAGCTCTATACATCTTGGTATGAATCTGCTTGCTAGTGTTGCTGGAGAGATGTCTAAATCTGAATCCCCAACTGATTCTCCTCAAAGGTCTACCCCGGTTTCTGAGTATCTCTGCAAAGGCACTGATCCCAGAGTCAAATCACCTCCAGTTGATGAGCTTGCTCGAGATGAAAATCAGTCTAATGATGTCGCTGATGATGAATGTGAGAACCACGGTGTTGCATTCACTACTTCTGGGGCTAAGAATGGGGTTGTCCAATCTTTTTCTTCCCTGCCTGAACAGTCTTCTGTAGCAGAGGACACTGGAAATCTATGCTCTTCAAATAGAAGTTTTCATCATTCTGCAGAACCCACCCCAGAAAGCAAAGAAAAATCTATGGAAGTTACTCTAGCTCCTTTTACTGCTTCCCCTCCTAGTACAGTTGAGAAAGCTATGGACGGTGAAGGAGTACCTCTTCAAGACAAAAAGGTGGTTGGTGGAGTGAGTGCTGATGTCATTTCAGAAAATAAGGTCAGTGATGTTAGTTCGAGGGTAGTAGTGGGGAATGAAGCCATTGAAGAACATTCCTTGCACCCAGAGTTTGATGTTGATGGTATGATAAAAACTTCAAGTTATGAAGGGAGTGTACATACGGAGGAGAAACCATCTAGTTTAAAGAAGCATTCTGAGTTGGTGAATGGAACCTGTGAAGAAGCGCTACTTTCTTCTAGTTTTCGTAAAGGTTTGATCTCAGAAAAAGTCAGTGAACTGAAGGCTGAAACAACTGATGAAAAGGATGGCCCGAGTTATTGTAATCAGGCTGAAAATCCCAGAATTGATTCAGAAAGTAATGGTCCTGGCACTTTGAAAACAGAAAATAATGATCTTACAACTCCTGGGAGTCAAGCTCTAGGTGGCTCTAGTTCCGCTGTTACTGATAATACCGGTGAAGATGTAGAGGAGAATATGAAAACTAAAGAAACTAATGATCAAGTTGTTGAACCTGGTATTAGGAAGGTGTCGCCTGATATTCCCATGCAGGAAGTAGAAGAATATTTGAGGCCGAAGAGTTCTAAATTAACCAACATGGAAGCAGAAGAAGCTGAGGAATGTACATCTACAACTGCAGATGCTTCTTCTGTGTCTGCTGCAGGGGCAGCAGTTGTGGATGCAAAAGTGGAGTTTGATTTGAACGAAGGCTTTAATGCCGATGATGGGAAATATGCAGAGCCAAATAATTTGACAGTACCTGGATGTTCAACTGCTCTTCGGTTGATTAGCCCGGTACCTTTTGCTGTTTCTTCTGTGTCTAGTGGCCTTCCTGCTTCAGTTTCAGTTCCTGCTGCAGCAAAAGGGCCGTGTGTTCCACCAGATGACCTGTTGAAGAGTAAAGGGGCGGAGGTTGGTTGGAGGGGATCAGCAGCTACAAGCGCGTTCCGGCCAGCTGAACCCAGAAAAGTTCAAGAATTTCCACTGGGTACAAGTATTTCAGTTCCCGAGCCTACACCGAGCAAGAAAGGACGCCCAGCTTTAGACATTGACTTGAACATACCCGATGAAAGAATTCTGGAGGATATGGCTTCTCAAAGTTCTGCTCAAGAGACATCTTCTATTGCTGACACAATAAACAATAAAGCTTTTGCGGGTGACCAGTCGATGAGTATTGCACCCGTTCACAGTTCTGGAGGTCTTGATCTTGACTTGAATCAAGTTGATGAGGCTTCTGAAATGGGCAATTATCCATTGAGCAATAGCCATCGAATGGATAACCAAATCCTATCAATAAAATCAGGTGGACCTGTCAATGGAGAAGTTAGTCTTTGTAGGGATTTTGATTTGAATAACGGACCTGTTGTTGATGAGTTGTGTGCTGAACCGGCAGTGTTTAGTCAGCATGCCATGAGCAGTGTACCATCTCAACCACCTGTATCTGGTTTTAGGATGAACAATACAGAAGTAGGGAATTTCTCATCATGGTTTCCTCCTAGCAATACGTATTCTGCAGTCGCAATTCCTTCAATTATTTCAGATTGTGGAGAGCAGCCATTCCCAGTTGTTGCAACTGGGGGACCACAGACGATGTTGGGCCCCCCTAGTGGTAGCAACCCATTTAACCCTGATCTGTACAGGGTGGGGTCGGTTTTGTCACCTTCCCCAGCAGTGCCCTATCCTTCTACTTCATTTCCATATCCAGTTTTTCCTTTTGGAAGCAATTTTCCTCTGCCCTCAGCCGCTTTTCCAGGCGGGTCAGCAACATATCTTGATTCATCATCTGCCGGGAGGCTTTTTCCTGGGGTTCGTTCCCAGCTGTTAGGACCTGCTGGTGTGGTTTCATCCAATTACCCAAGGCCTTATGTTGTTAATCTTCCTGATGGTAGCAATAACAGTAGCGGTGAAAGCAGTAGGAAGTGGGGAAGACAAGGGCTTGATCTCAATGCAGGGCCTGGAGGTCCAGACTTAGATGGGAGAGATGTGACATCACCTCTTGTCCCGCGGCAACTATCTGTTGCCAGTTCACAAGCCATGGCTGAGGACCAAGCAAGGATGTTCCAGATGCAAGGTGGCACCTTTAAAAGGAAGGAACCCGAGGGAGGGTGGGACGCCTACAGACAGTCCTTGTGGAAATAG

Protein Analysis

1613

Amino Acids

171.36

Weight (kDa)

5.31

Isoelectric Point (pI)

49.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BAH PF01426 45 - 151 7.1e-11 BAH domain
Med26 PF08711 360 - 409 1.5e-13 TFIIS helical bundle-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 355, 4537
Acc65I GGTACC 1 cut(s) 3496
AccB1I GGYRCC 2 cut(s) 3496, 4775
AccB7I CCANNNNNTGG 3 cut(s) 590, 1910, 3973
AccBSI CCGCTC 1 cut(s) 688
AccI GTMKAC 1 cut(s) 2321
AccII CGCG 4 cut(s) 61, 380, 3644, 4705
AcoI YGGCCR 4 cut(s) 72, 568, 895, 3650
AcsI RAATTY 6 cut(s) 315, 935, 2212, 3677, 3774, 4174
AcuI CTGAAG 6 cut(s) 849, 1374, 1416, 1971, 3002, 3522
AcyI GRCGYC 3 cut(s) 1524, 3733, 4812
AdeI CACNNNGTG 1 cut(s) 1931
AfeI AGCGCT 1 cut(s) 2928
AflIII ACRYGT 2 cut(s) 42, 59
AgeI ACCGGT 1 cut(s) 3155
AjuI GAANNNNNNNTTGG 6 cut(s) 101, 133, 261, 293, 2164, 2196
Alw21I GWGCWC 3 cut(s) 157, 1358, 1664
Alw26I GTCTC 2 cut(s) 1273, 3806
AlwNI CAGNNNCTG 4 cut(s) 1742, 3461, 3551, 4655
Ama87I CYCGRG 5 cut(s) 1506, 2394, 3013, 3707, 4796
Aor51HI AGCGCT 1 cut(s) 2928
ApaI GGGCCC 1 cut(s) 4301
ApoI RAATTY 6 cut(s) 315, 935, 2212, 3677, 3774, 4174
AseI ATTAAT 1 cut(s) 492
AsiGI ACCGGT 1 cut(s) 3155
Asp700I GAANNNNTTC 2 cut(s) 3049, 3774
Asp718I GGTACC 1 cut(s) 3496
AspLEI GCGC 3 cut(s) 307, 2929, 3644
AsuC2I CCSGG 6 cut(s) 1443, 2105, 2139, 2327, 3494, 4489
AsuII TTCGAA 1 cut(s) 1610
AvaI CYCGRG 5 cut(s) 1506, 2394, 3013, 3707, 4796
BaeGI GKGCMC 3 cut(s) 1090, 4301, 4377
BalI TGGCCA 1 cut(s) 74
BamHI GGATCC 2 cut(s) 990, 2099
BanI GGYRCC 2 cut(s) 3496, 4775
BanII GRGCYC 3 cut(s) 1358, 1664, 4301
BarI GAAGNNNNNNTAC 4 cut(s) 2841, 2873, 2913, 2945
BbsI GAAGAC 2 cut(s) 2508, 4633
Bbv12I GWGCWC 3 cut(s) 157, 1358, 1664
BbvCI CCTCAGC 4 cut(s) 1869, 3315, 4438, 4740
BceAI ACGGC 2 cut(s) 1331, 3553
BclI TGATCA 3 cut(s) 478, 1615, 3199
BcnI CCSGG 6 cut(s) 1443, 2105, 2139, 2327, 3494, 4489
BcoDI GTCTC 2 cut(s) 1273, 3806
BfoI RGCGCY 1 cut(s) 2930
BfuAI ACCTGC 2 cut(s) 355, 4537
BmeT110I CYCGRG 5 cut(s) 1506, 2394, 3013, 3707, 4796
BmrI ACTGGG 3 cut(s) 3695, 4256, 4284
BmuI ACTGGG 3 cut(s) 3695, 4256, 4284
BpiI GAAGAC 2 cut(s) 2508, 4633
BplI GAGNNNNNCTC 2 cut(s) 3103, 3135
BpmI CTGGAG 6 cut(s) 1650, 2295, 2361, 3800, 3915, 4677
Bpu10I CCTNAGC 4 cut(s) 1869, 3315, 4438, 4740
Bpu14I TTCGAA 1 cut(s) 1610
BpuEI CTTGAG 3 cut(s) 519, 947, 3792
BpuMI CCSGG 6 cut(s) 1443, 2105, 2139, 2327, 3494, 4489
BsaAI YACGTR 1 cut(s) 4206
BsaBI GATNNNNATC 1 cut(s) 2403
BsaHI GRCGYC 3 cut(s) 1524, 3733, 4812
BsaWI WCCGGW 1 cut(s) 3155
BsaXI ACNNNNNCTCC 5 cut(s) 31, 2293, 2323, 2608, 2638
Bse118I RCCGGY 4 cut(s) 432, 897, 3155, 4087
Bse8I GATNNNNATC 1 cut(s) 2403
BseJI GATNNNNATC 1 cut(s) 2403
BseRI GAGGAG 6 cut(s) 35, 1076, 1672, 2301, 2882, 3185
BseSI GKGCMC 3 cut(s) 1090, 4301, 4377
BseYI CCCAGC 3 cut(s) 3736, 4366, 4515
BsgI GTGCAG 2 cut(s) 578, 1908
Bsh1236I CGCG 4 cut(s) 61, 380, 3644, 4705
BshNI GGYRCC 2 cut(s) 3496, 4775
BshTI ACCGGT 1 cut(s) 3155
BsiHKAI GWGCWC 3 cut(s) 157, 1358, 1664
BsiHKCI CYCGRG 5 cut(s) 1506, 2394, 3013, 3707, 4796
BslFI GGGAC 5 cut(s) 38, 2153, 4293, 4685, 4823
BsmAI GTCTC 2 cut(s) 1273, 3806
BsmFI GGGAC 5 cut(s) 38, 2153, 4293, 4685, 4823
BsmI GAATGC 3 cut(s) 1321, 2453, 2893
BsoBI CYCGRG 5 cut(s) 1506, 2394, 3013, 3707, 4796
Bsp119I TTCGAA 1 cut(s) 1610
Bsp120I GGGCCC 1 cut(s) 4297
Bsp1286I GDGCHC 6 cut(s) 157, 1090, 1358, 1664, 4301, 4377
Bsp1407I TGTACA 3 cut(s) 2857, 3323, 4335
Bsp19I CCATGG 2 cut(s) 1405, 4734
BspFNI CGCG 4 cut(s) 61, 380, 3644, 4705
BspHI TCATGA 1 cut(s) 855
BspMAI CTGCAG 6 cut(s) 852, 2578, 3340, 3364, 3559, 4216
BspMI ACCTGC 2 cut(s) 355, 4537
BspQI GCTCTTC 5 cut(s) 1346, 1708, 2118, 2554, 3483
BspT104I TTCGAA 1 cut(s) 1610
BspT107I GGYRCC 2 cut(s) 3496, 4775
BsrBI CCGCTC 1 cut(s) 688
BsrFI RCCGGY 4 cut(s) 432, 897, 3155, 4087
BsrGI TGTACA 3 cut(s) 2857, 3323, 4335
BssAI RCCGGY 4 cut(s) 432, 897, 3155, 4087
BssNI GRCGYC 3 cut(s) 1524, 3733, 4812
BssT1I CCWWGG 4 cut(s) 1405, 1553, 4556, 4734
Bst6I CTCTTC 8 cut(s) 1346, 1708, 2118, 2554, 2691, 3272, 3483, 3590
BstACI GRCGYC 3 cut(s) 1524, 3733, 4812
BstAUI TGTACA 3 cut(s) 2857, 3323, 4335
BstBAI YACGTR 1 cut(s) 4206
BstBI TTCGAA 1 cut(s) 1610
BstC8I GCNNGC 8 cut(s) 434, 549, 895, 909, 2262, 2391, 3654, 4107
BstDSI CCRYGG 4 cut(s) 1405, 2443, 4703, 4734
BstEII GGTNACC 1 cut(s) 3857
BstENI CCTNNNNNAGG 1 cut(s) 4783
BstFNI CGCG 4 cut(s) 61, 380, 3644, 4705
BstH2I RGCGCY 1 cut(s) 2930
BstHHI GCGC 3 cut(s) 307, 2929, 3644
BstMAI GTCTC 2 cut(s) 1273, 3806
BstNSI RCATGY 3 cut(s) 46, 551, 4109
BstPI GGTNACC 1 cut(s) 3857
BstSLI GKGCMC 3 cut(s) 1090, 4301, 4377
BstSNI TACGTA 1 cut(s) 4206
BstUI CGCG 4 cut(s) 61, 380, 3644, 4705
BstV2I GAAGAC 2 cut(s) 2508, 4633
BstX2I RGATCY 6 cut(s) 701, 990, 1331, 1445, 1954, 2099
BstXI CCANNNNNNTGG 3 cut(s) 644, 1001, 1412
BstYI RGATCY 6 cut(s) 701, 990, 1331, 1445, 1954, 2099
BtgI CCRYGG 4 cut(s) 1405, 2443, 4703, 4734
BtsI GCAGTG 4 cut(s) 1942, 4098, 4123, 4377
BveI ACCTGC 2 cut(s) 355, 4537
Cac8I GCNNGC 8 cut(s) 434, 549, 895, 909, 2262, 2391, 3654, 4107
CaiI CAGNNNCTG 4 cut(s) 1742, 3461, 3551, 4655
CciI TCATGA 1 cut(s) 855
CfoI GCGC 3 cut(s) 307, 2929, 3644
Cfr10I RCCGGY 4 cut(s) 432, 897, 3155, 4087
Cfr42I CCGCGG 1 cut(s) 4706
CseI GACGC 4 cut(s) 1171, 1513, 3741, 4820
CsiI ACCWGGT 1 cut(s) 3214
CspAI ACCGGT 1 cut(s) 3155
DraI TTTAAA 4 cut(s) 780, 1962, 2886, 4783
DraIII CACNNNGTG 1 cut(s) 1931
EaeI YGGCCR 4 cut(s) 72, 568, 895, 3650
Eam1104I CTCTTC 8 cut(s) 1346, 1708, 2118, 2554, 2691, 3272, 3483, 3590
EarI CTCTTC 8 cut(s) 1346, 1708, 2118, 2554, 2691, 3272, 3483, 3590
EciI GGCGGA 1 cut(s) 3623
Ecl136II GAGCTC 2 cut(s) 1356, 1662
Eco105I TACGTA 1 cut(s) 4206
Eco130I CCWWGG 4 cut(s) 1405, 1553, 4556, 4734
Eco147I AGGCCT 2 cut(s) 816, 4561
Eco24I GRGCYC 3 cut(s) 1358, 1664, 4301
Eco47III AGCGCT 1 cut(s) 2928
Eco53kI GAGCTC 2 cut(s) 1356, 1662
Eco57I CTGAAG 6 cut(s) 849, 1374, 1416, 1971, 3002, 3522
Eco88I CYCGRG 5 cut(s) 1506, 2394, 3013, 3707, 4796
Eco91I GGTNACC 1 cut(s) 3857
EcoICRI GAGCTC 2 cut(s) 1356, 1662
EcoNI CCTNNNNNAGG 1 cut(s) 4783
EcoO109I RGGNCCY 3 cut(s) 4298, 4526, 4652
EcoO65I GGTNACC 1 cut(s) 3857
EcoRI GAATTC 1 cut(s) 3774
EcoT14I CCWWGG 4 cut(s) 1405, 1553, 4556, 4734
EcoT22I ATGCAT 2 cut(s) 6, 549
EcoT38I GRGCYC 3 cut(s) 1358, 1664, 4301
ErhI CCWWGG 4 cut(s) 1405, 1553, 4556, 4734
FaqI GGGAC 5 cut(s) 38, 2153, 4293, 4685, 4823
FauI CCCGC 4 cut(s) 681, 3847, 4448, 4710
FbaI TGATCA 3 cut(s) 478, 1615, 3199
FblI GTMKAC 1 cut(s) 2321
FriOI GRGCYC 3 cut(s) 1358, 1664, 4301
GlaI GCGC 3 cut(s) 306, 2928, 3643
GsaI CCCAGC 3 cut(s) 3740, 4370, 4519
GsuI CTGGAG 6 cut(s) 1650, 2295, 2361, 3800, 3915, 4677
HaeII RGCGCY 1 cut(s) 2930
HgaI GACGC 4 cut(s) 1171, 1513, 3741, 4820
HhaI GCGC 3 cut(s) 307, 2929, 3644
Hin1I GRCGYC 3 cut(s) 1524, 3733, 4812
Hin6I GCGC 3 cut(s) 305, 2927, 3642
HinP1I GCGC 3 cut(s) 305, 2927, 3642
HindIII AAGCTT 5 cut(s) 275, 1198, 1397, 2004, 3846
Hpy166II GTNNAC 8 cut(s) 2035, 2322, 2858, 2978, 3886, 4007, 4121, 4727
Hpy8I GTNNAC 8 cut(s) 2035, 2322, 2858, 2978, 3886, 4007, 4121, 4727
HpyCH4IV ACGT 1 cut(s) 4205
HpySE526I ACGT 1 cut(s) 4205
Hsp92I GRCGYC 3 cut(s) 1524, 3733, 4812
HspAI GCGC 3 cut(s) 305, 2927, 3642
KpnI GGTACC 1 cut(s) 3500
KroI GCCGGC 1 cut(s) 432
KroNI GCCGGC 1 cut(s) 434
Ksp22I TGATCA 3 cut(s) 478, 1615, 3199
KspI CCGCGG 1 cut(s) 4706
LguI GCTCTTC 5 cut(s) 1346, 1708, 2118, 2554, 3483
LmnI GCTCC 3 cut(s) 685, 1659, 2629
MabI ACCWGGT 1 cut(s) 3214
MaeII ACGT 1 cut(s) 4205
MbiI CCGCTC 1 cut(s) 688
MfeI CAATTG 1 cut(s) 518
MflI RGATCY 6 cut(s) 701, 990, 1331, 1445, 1954, 2099
MhlI GDGCHC 6 cut(s) 157, 1090, 1358, 1664, 4301, 4377
MlsI TGGCCA 1 cut(s) 74
MluI ACGCGT 1 cut(s) 59
MluNI TGGCCA 1 cut(s) 74
MlyI GAGTC 3 cut(s) 2141, 2373, 3121
MmeI TCCRAC 4 cut(s) 276, 620, 982, 3599
Mox20I TGGCCA 1 cut(s) 74
Mph1103I ATGCAT 2 cut(s) 6, 549
MroNI GCCGGC 1 cut(s) 432
MroXI GAANNNNTTC 2 cut(s) 3049, 3774
MscI TGGCCA 1 cut(s) 74
MslI CAYNNNNRTG 3 cut(s) 336, 1326, 1410
Msp20I TGGCCA 1 cut(s) 74
MspA1I CMGCKG 4 cut(s) 3140, 3656, 4519, 4705
MunI CAATTG 1 cut(s) 518
Mva1269I GAATGC 3 cut(s) 1321, 2453, 2893
MvnI CGCG 4 cut(s) 61, 380, 3644, 4705
NaeI GCCGGC 1 cut(s) 434
NciI CCSGG 6 cut(s) 1443, 2105, 2139, 2327, 3494, 4489
NcoI CCATGG 2 cut(s) 1405, 4734
NgoMIV GCCGGC 1 cut(s) 432
NmuCI GTSAC 7 cut(s) 208, 1360, 1525, 2141, 3857, 4356, 4684
NsiI ATGCAT 2 cut(s) 6, 549
NspI RCATGY 3 cut(s) 46, 551, 4109
NspV TTCGAA 1 cut(s) 1610
PaeI GCATGC 2 cut(s) 551, 4109
PaeR7I CTCGAG 2 cut(s) 1506, 2394
PagI TCATGA 1 cut(s) 855
PceI AGGCCT 2 cut(s) 816, 4561
PciI ACATGT 1 cut(s) 42
PciSI GCTCTTC 5 cut(s) 1346, 1708, 2118, 2554, 3483
PctI GAATGC 3 cut(s) 1321, 2453, 2893
PdiI GCCGGC 1 cut(s) 434
PdmI GAANNNNTTC 2 cut(s) 3049, 3774
PflMI CCANNNNNTGG 3 cut(s) 590, 1910, 3973
PinAI ACCGGT 1 cut(s) 3155
PleI GAGTC 3 cut(s) 2141, 2372, 3120
PpsI GAGTC 3 cut(s) 2141, 2372, 3120
Ppu21I YACGTR 1 cut(s) 4206
PpuMI RGGWCCY 1 cut(s) 4526
PscI ACATGT 1 cut(s) 42
PshBI ATTAAT 1 cut(s) 492
Psp124BI GAGCTC 2 cut(s) 1358, 1664
Psp5II RGGWCCY 1 cut(s) 4526
PspEI GGTNACC 1 cut(s) 3857
PspFI CCCAGC 3 cut(s) 3736, 4366, 4515
PspOMI GGGCCC 1 cut(s) 4297
PspPPI RGGWCCY 1 cut(s) 4526
PspXI VCTCGAGB 1 cut(s) 1506
PstI CTGCAG 6 cut(s) 852, 2578, 3340, 3364, 3559, 4216
PstNI CAGNNNCTG 4 cut(s) 1742, 3461, 3551, 4655
PsuI RGATCY 6 cut(s) 701, 990, 1331, 1445, 1954, 2099
PvuII CAGCTG 2 cut(s) 3656, 4519
RseI CAYNNNNRTG 3 cut(s) 336, 1326, 1410
SacI GAGCTC 2 cut(s) 1358, 1664
SacII CCGCGG 1 cut(s) 4706
SapI GCTCTTC 5 cut(s) 1346, 1708, 2118, 2554, 3483
SchI GAGTC 3 cut(s) 2141, 2373, 3121
SduI GDGCHC 6 cut(s) 157, 1090, 1358, 1664, 4301, 4377
SexAI ACCWGGT 1 cut(s) 3214
Sfr274I CTCGAG 2 cut(s) 1506, 2394
Sfr303I CCGCGG 1 cut(s) 4706
SfuI TTCGAA 1 cut(s) 1610
SgrBI CCGCGG 1 cut(s) 4706
SlaI CTCGAG 2 cut(s) 1506, 2394
SmiMI CAYNNNNRTG 3 cut(s) 336, 1326, 1410
SmlI CTYRAG 5 cut(s) 534, 962, 1506, 2394, 3807
SmoI CTYRAG 5 cut(s) 534, 962, 1506, 2394, 3807
SnaBI TACGTA 1 cut(s) 4206
SphI GCATGC 2 cut(s) 551, 4109
SseBI AGGCCT 2 cut(s) 816, 4561
SspI AATATT 1 cut(s) 3266
SstI GAGCTC 2 cut(s) 1358, 1664
StuI AGGCCT 2 cut(s) 816, 4561
StyI CCWWGG 4 cut(s) 1405, 1553, 4556, 4734
TaiI ACGT 1 cut(s) 4208
TatI WGTACW 6 cut(s) 958, 2071, 2648, 2857, 3323, 4335
TauI GCSGC 4 cut(s) 353, 1265, 4445, 4708
TseFI GTSAC 7 cut(s) 208, 1360, 1525, 2141, 3857, 4356, 4684
Tsp45I GTSAC 7 cut(s) 208, 1360, 1525, 2141, 3857, 4356, 4684
TspGWI ACGGA 6 cut(s) 46, 357, 396, 1174, 2879, 4071
Van91I CCANNNNNTGG 3 cut(s) 590, 1910, 3973
VspI ATTAAT 1 cut(s) 492
XagI CCTNNNNNAGG 1 cut(s) 4783
XapI RAATTY 6 cut(s) 315, 935, 2212, 3677, 3774, 4174
XceI RCATGY 3 cut(s) 46, 551, 4109
XcmI CCANNNNNNNNNTGG 1 cut(s) 4769
XhoI CTCGAG 2 cut(s) 1506, 2394
XmiI GTMKAC 1 cut(s) 2321
XmnI GAANNNNTTC 2 cut(s) 3049, 3774
Zsp2I ATGCAT 2 cut(s) 6, 549
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.