TFIIS helical bundle-like domain
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G48050 AT3G48050 AT3G48060 AT3G48060 AT3G48060 |
| fragaria_vesca | FvH4_5g16640 FvH4_5g16640 FvH4_5g16640 FvH4_5g16640 |
| malus_domestica | MD06G1178400.v1.1 MD14G1184800.v1.1 |
| prunus_persica | Prupe.5G177500_v2.0.a1 Prupe.5G177500_v2.0.a1 |
| pyrus_communis | pycom06g15860 pycom14g15380 |
| rosa_chinensis | RchiOBHm_Chr7g0179511 |
| rosa_laevigata | RLG00000005348 |
| rosa_multiflora | Rmu_sc0000735.1_g000008 |
| rosa_roxburghii | Rroxscaffold_3G00273930 |
| rosa_rugosa | Rorug06G0424900 Rorug06G0424900 Rorug06G0425000.1 |
| rosa_samantha | Rh7AG024900 Rh7BG024100 Rh7CG025500 Rh7DG025300 |
| rosa_wichuraiana | Rw7G002000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 4370 |
| Acc36I | ACCTGC | 2 cut(s) | 1466, 4370 |
| Acc65I | GGTACC | 2 cut(s) | 2036, 4703 |
| AccB1I | GGYRCC | 5 cut(s) | 847, 1456, 2036, 3808, 4703 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 4178 |
| AccI | GTMKAC | 3 cut(s) | 810, 2846, 4266 |
| AccII | CGCG | 2 cut(s) | 2145, 3787 |
| AciI | CCGC | 7 cut(s) | 1147, 1914, 2121, 2334, 3300, 3572, 4701 |
| AclWI | GGATC | 5 cut(s) | 619, 2104, 2996, 3647, 3843 |
| AcoI | YGGCCR | 5 cut(s) | 60, 556, 883, 2331, 3590 |
| AcsI | RAATTY | 5 cut(s) | 88, 303, 923, 3111, 3374 |
| AcyI | GRCGYC | 1 cut(s) | 3676 |
| AdeI | CACNNNGTG | 2 cut(s) | 1907, 2821 |
| AfaI | GTAC | 4 cut(s) | 1999, 2038, 3705, 4705 |
| AflIII | ACRYGT | 3 cut(s) | 42, 1210, 3199 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 688 |
| AjiI | CACGTC | 1 cut(s) | 4612 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 175, 207, 249, 281, 2164, 2196 |
| AleI | CACNNNNGTG | 1 cut(s) | 3093 |
| Alw21I | GWGCWC | 7 cut(s) | 145, 1355, 1661, 1753, 2387, 2923, 3102 |
| Alw26I | GTCTC | 5 cut(s) | 675, 1587, 2521, 2980, 4602 |
| Alw44I | GTGCAC | 1 cut(s) | 2919 |
| AlwI | GGATC | 5 cut(s) | 619, 2104, 2996, 3647, 3843 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 2396, 3404, 4583 |
| Ama87I | CYCGRG | 2 cut(s) | 2457, 3722 |
| ApaI | GGGCCC | 1 cut(s) | 2558 |
| ApaLI | GTGCAC | 1 cut(s) | 2919 |
| ApoI | RAATTY | 5 cut(s) | 88, 303, 923, 3111, 3374 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 1854, 1886, 4213, 4245 |
| AseI | ATTAAT | 2 cut(s) | 480, 1865 |
| Asp718I | GGTACC | 2 cut(s) | 2036, 4703 |
| AspA2I | CCTAGG | 1 cut(s) | 1706 |
| AspLEI | GCGC | 3 cut(s) | 2145, 2621, 3787 |
| AsuC2I | CCSGG | 2 cut(s) | 677, 1504 |
| AsuHPI | GGTGA | 7 cut(s) | 29, 1022, 1455, 2109, 2427, 3178, 4611 |
| AsuII | TTCGAA | 1 cut(s) | 86 |
| AvaI | CYCGRG | 2 cut(s) | 2457, 3722 |
| AvrII | CCTAGG | 1 cut(s) | 1706 |
| BaeGI | GKGCMC | 3 cut(s) | 1078, 2558, 2923 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2376, 2409 |
| BanI | GGYRCC | 5 cut(s) | 847, 1456, 2036, 3808, 4703 |
| BanII | GRGCYC | 5 cut(s) | 1355, 1661, 1753, 2558, 3068 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 4456, 4488 |
| Bbv12I | GWGCWC | 7 cut(s) | 145, 1355, 1661, 1753, 2387, 2923, 3102 |
| BbvCI | CCTCAGC | 1 cut(s) | 4668 |
| BceAI | ACGGC | 4 cut(s) | 75, 1444, 1718, 3062 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1641, 1675, 3995, 4029 |
| BciVI | GTATCC | 2 cut(s) | 632, 1339 |
| BclI | TGATCA | 5 cut(s) | 466, 1612, 1984, 3136, 3790 |
| BcnI | CCSGG | 2 cut(s) | 677, 1504 |
| BcoDI | GTCTC | 5 cut(s) | 675, 1587, 2521, 2980, 4602 |
| BfmI | CTRYAG | 6 cut(s) | 2160, 3057, 3282, 3498, 3657, 4267 |
| BfuAI | ACCTGC | 2 cut(s) | 1466, 4370 |
| BfuI | GTATCC | 2 cut(s) | 632, 1339 |
| BglII | AGATCT | 1 cut(s) | 1930 |
| BlnI | CCTAGG | 1 cut(s) | 1706 |
| BlpI | GCTNAGC | 2 cut(s) | 291, 3597 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 688 |
| BmeT110I | CYCGRG | 2 cut(s) | 2457, 3722 |
| BmgBI | CACGTC | 1 cut(s) | 4612 |
| BmrI | ACTGGG | 3 cut(s) | 2384, 2813, 4438 |
| BmuI | ACTGGG | 3 cut(s) | 2384, 2813, 4438 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2737 |
| BpmI | CTGGAG | 5 cut(s) | 1422, 1767, 3846, 4113, 4278 |
| Bpu10I | CCTNAGC | 3 cut(s) | 953, 2220, 4668 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 291, 3597 |
| Bpu14I | TTCGAA | 1 cut(s) | 86 |
| BpuEI | CTTGAG | 4 cut(s) | 507, 636, 2465, 3723 |
| BpuMI | CCSGG | 2 cut(s) | 677, 1504 |
| Bsa29I | ATCGAT | 1 cut(s) | 3797 |
| BsaBI | GATNNNNATC | 3 cut(s) | 2022, 2496, 3846 |
| BsaHI | GRCGYC | 1 cut(s) | 3676 |
| BsaI | GGTCTC | 2 cut(s) | 675, 2980 |
| BsaXI | ACNNNNNCTCC | 9 cut(s) | 31, 792, 822, 2356, 2386, 2584, 2614, 4216, 4246 |
| Bse118I | RCCGGY | 5 cut(s) | 420, 885, 1090, 1667, 4021 |
| Bse3DI | GCAATG | 2 cut(s) | 1784, 2422 |
| Bse8I | GATNNNNATC | 3 cut(s) | 2022, 2496, 3846 |
| BseCI | ATCGAT | 1 cut(s) | 3797 |
| BseJI | GATNNNNATC | 3 cut(s) | 2022, 2496, 3846 |
| BseMI | GCAATG | 2 cut(s) | 1784, 2422 |
| BseRI | GAGGAG | 5 cut(s) | 35, 813, 1064, 2395, 4685 |
| BseSI | GKGCMC | 3 cut(s) | 1078, 2558, 2923 |
| BseX3I | CGGCCG | 1 cut(s) | 60 |
| BsgI | GTGCAG | 3 cut(s) | 566, 968, 2798 |
| Bsh1236I | CGCG | 2 cut(s) | 2145, 3787 |
| Bsh1285I | CGRYCG | 1 cut(s) | 63 |
| BshNI | GGYRCC | 5 cut(s) | 847, 1456, 2036, 3808, 4703 |
| BshVI | ATCGAT | 1 cut(s) | 3797 |
| BsiEI | CGRYCG | 1 cut(s) | 63 |
| BsiHKAI | GWGCWC | 7 cut(s) | 145, 1355, 1661, 1753, 2387, 2923, 3102 |
| BsiHKCI | CYCGRG | 2 cut(s) | 2457, 3722 |
| BsiSI | CCGG | 9 cut(s) | 421, 676, 886, 1091, 1504, 1668, 3589, 4022, 4413 |
| BslFI | GGGAC | 5 cut(s) | 38, 686, 1250, 2153, 2545 |
| BsmAI | GTCTC | 5 cut(s) | 675, 1587, 2521, 2980, 4602 |
| BsmBI | CGTCTC | 1 cut(s) | 4602 |
| BsmFI | GGGAC | 5 cut(s) | 38, 686, 1250, 2153, 2545 |
| BsmI | GAATGC | 5 cut(s) | 1318, 1969, 2860, 3272, 4425 |
| Bso31I | GGTCTC | 2 cut(s) | 675, 2980 |
| BsoBI | CYCGRG | 2 cut(s) | 2457, 3722 |
| Bsp119I | TTCGAA | 1 cut(s) | 86 |
| Bsp120I | GGGCCC | 1 cut(s) | 2554 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 291, 3597 |
| Bsp19I | CCATGG | 1 cut(s) | 4631 |
| BspACI | CCGC | 7 cut(s) | 1147, 1914, 2121, 2334, 3300, 3572, 4701 |
| BspDI | ATCGAT | 1 cut(s) | 3797 |
| BspFNI | CGCG | 2 cut(s) | 2145, 3787 |
| BspMAI | CTGCAG | 4 cut(s) | 2164, 3061, 3286, 3502 |
| BspMI | ACCTGC | 2 cut(s) | 1466, 4370 |
| BspPI | GGATC | 5 cut(s) | 619, 2104, 2996, 3647, 3843 |
| BspQI | GCTCTTC | 1 cut(s) | 2133 |
| BspT104I | TTCGAA | 1 cut(s) | 86 |
| BspT107I | GGYRCC | 5 cut(s) | 847, 1456, 2036, 3808, 4703 |
| BspTNI | GGTCTC | 2 cut(s) | 675, 2980 |
| BsrDI | GCAATG | 2 cut(s) | 1784, 2422 |
| BsrFI | RCCGGY | 5 cut(s) | 420, 885, 1090, 1667, 4021 |
| BssAI | RCCGGY | 5 cut(s) | 420, 885, 1090, 1667, 4021 |
| BssNI | GRCGYC | 1 cut(s) | 3676 |
| BssT1I | CCWWGG | 7 cut(s) | 1283, 1402, 1706, 2250, 4484, 4631, 4754 |
| Bst6I | CTCTTC | 3 cut(s) | 2133, 2445, 2667 |
| BstACI | GRCGYC | 1 cut(s) | 3676 |
| BstBI | TTCGAA | 1 cut(s) | 86 |
| BstDSI | CCRYGG | 1 cut(s) | 4631 |
| BstEII | GGTNACC | 2 cut(s) | 1287, 2115 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 4711, 4728 |
| BstFNI | CGCG | 2 cut(s) | 2145, 3787 |
| BstHHI | GCGC | 3 cut(s) | 2145, 2621, 3787 |
| BstMAI | GTCTC | 5 cut(s) | 675, 1587, 2521, 2980, 4602 |
| BstMCI | CGRYCG | 1 cut(s) | 63 |
| BstNSI | RCATGY | 4 cut(s) | 46, 539, 2249, 3203 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2737 |
| BstPI | GGTNACC | 2 cut(s) | 1287, 2115 |
| BstSFI | CTRYAG | 6 cut(s) | 2160, 3057, 3282, 3498, 3657, 4267 |
| BstSLI | GKGCMC | 3 cut(s) | 1078, 2558, 2923 |
| BstUI | CGCG | 2 cut(s) | 2145, 3787 |
| BstX2I | RGATCY | 3 cut(s) | 1930, 2096, 3835 |
| BstYI | RGATCY | 3 cut(s) | 1930, 2096, 3835 |
| BstZI | CGGCCG | 1 cut(s) | 60 |
| Bsu15I | ATCGAT | 1 cut(s) | 3797 |
| BsuI | GTATCC | 2 cut(s) | 632, 1339 |
| BsuTUI | ATCGAT | 1 cut(s) | 3797 |
| BtgI | CCRYGG | 1 cut(s) | 4631 |
| BtrI | CACGTC | 1 cut(s) | 4612 |
| BtsI | GCAGTG | 2 cut(s) | 4057, 4305 |
| BveI | ACCTGC | 2 cut(s) | 1466, 4370 |
| CaiI | CAGNNNCTG | 3 cut(s) | 2396, 3404, 4583 |
| CfoI | GCGC | 3 cut(s) | 2145, 2621, 3787 |
| Cfr10I | RCCGGY | 5 cut(s) | 420, 885, 1090, 1667, 4021 |
| ClaI | ATCGAT | 1 cut(s) | 3797 |
| CseI | GACGC | 2 cut(s) | 126, 3684 |
| CsiI | ACCWGGT | 2 cut(s) | 2209, 4456 |
| Csp6I | GTAC | 4 cut(s) | 1998, 2037, 3704, 4704 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1321, 1356 |
| CviQI | GTAC | 4 cut(s) | 1998, 2037, 3704, 4704 |
| DraI | TTTAAA | 3 cut(s) | 768, 1254, 2080 |
| DraIII | CACNNNGTG | 2 cut(s) | 1907, 2821 |
| DriI | GACNNNNNGTC | 1 cut(s) | 688 |
| EaeI | YGGCCR | 5 cut(s) | 60, 556, 883, 2331, 3590 |
| EagI | CGGCCG | 1 cut(s) | 60 |
| Eam1104I | CTCTTC | 3 cut(s) | 2133, 2445, 2667 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 688 |
| EarI | CTCTTC | 3 cut(s) | 2133, 2445, 2667 |
| Ecl136II | GAGCTC | 3 cut(s) | 1353, 1659, 1751 |
| EclXI | CGGCCG | 1 cut(s) | 60 |
| Eco130I | CCWWGG | 7 cut(s) | 1283, 1402, 1706, 2250, 4484, 4631, 4754 |
| Eco24I | GRGCYC | 5 cut(s) | 1355, 1661, 1753, 2558, 3068 |
| Eco31I | GGTCTC | 2 cut(s) | 675, 2980 |
| Eco52I | CGGCCG | 1 cut(s) | 60 |
| Eco53kI | GAGCTC | 3 cut(s) | 1353, 1659, 1751 |
| Eco88I | CYCGRG | 2 cut(s) | 2457, 3722 |
| Eco91I | GGTNACC | 2 cut(s) | 1287, 2115 |
| EcoICRI | GAGCTC | 3 cut(s) | 1353, 1659, 1751 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 4711, 4728 |
| EcoO109I | RGGNCCY | 7 cut(s) | 2449, 2554, 2555, 3509, 4229, 4454, 4580 |
| EcoO65I | GGTNACC | 2 cut(s) | 1287, 2115 |
| EcoRI | GAATTC | 1 cut(s) | 88 |
| EcoT14I | CCWWGG | 7 cut(s) | 1283, 1402, 1706, 2250, 4484, 4631, 4754 |
| EcoT22I | ATGCAT | 5 cut(s) | 6, 537, 1971, 2247, 2862 |
| EcoT38I | GRGCYC | 5 cut(s) | 1355, 1661, 1753, 2558, 3068 |
| ErhI | CCWWGG | 7 cut(s) | 1283, 1402, 1706, 2250, 4484, 4631, 4754 |
| Esp3I | CGTCTC | 1 cut(s) | 4602 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 249, 281 |
| FaqI | GGGAC | 5 cut(s) | 38, 686, 1250, 2153, 2545 |
| FauI | CCCGC | 1 cut(s) | 2128 |
| FbaI | TGATCA | 5 cut(s) | 466, 1612, 1984, 3136, 3790 |
| FblI | GTMKAC | 3 cut(s) | 810, 2846, 4266 |
| FriOI | GRGCYC | 5 cut(s) | 1355, 1661, 1753, 2558, 3068 |
| GlaI | GCGC | 3 cut(s) | 2144, 2620, 3786 |
| GsuI | CTGGAG | 5 cut(s) | 1422, 1767, 3846, 4113, 4278 |
| HapII | CCGG | 9 cut(s) | 421, 676, 886, 1091, 1504, 1668, 3589, 4022, 4413 |
| HgaI | GACGC | 2 cut(s) | 126, 3684 |
| HhaI | GCGC | 3 cut(s) | 2145, 2621, 3787 |
| Hin1I | GRCGYC | 1 cut(s) | 3676 |
| Hin6I | GCGC | 3 cut(s) | 2143, 2619, 3785 |
| HinP1I | GCGC | 3 cut(s) | 2143, 2619, 3785 |
| HincII | GTYRAC | 4 cut(s) | 48, 2050, 3856, 3924 |
| HindII | GTYRAC | 4 cut(s) | 48, 2050, 3856, 3924 |
| HindIII | AAGCTT | 3 cut(s) | 263, 389, 1394 |
| HpaI | GTTAAC | 1 cut(s) | 2050 |
| HpaII | CCGG | 9 cut(s) | 421, 676, 886, 1091, 1504, 1668, 3589, 4022, 4413 |
| HphI | GGTGA | 7 cut(s) | 29, 1022, 1455, 2109, 2427, 3178, 4611 |
| HpyCH4IV | ACGT | 3 cut(s) | 1210, 4373, 4611 |
| HpySE526I | ACGT | 3 cut(s) | 1210, 4373, 4611 |
| Hsp92I | GRCGYC | 1 cut(s) | 3676 |
| HspAI | GCGC | 3 cut(s) | 2143, 2619, 3785 |
| KpnI | GGTACC | 2 cut(s) | 2040, 4707 |
| KroI | GCCGGC | 1 cut(s) | 420 |
| KroNI | GCCGGC | 1 cut(s) | 422 |
| Ksp22I | TGATCA | 5 cut(s) | 466, 1612, 1984, 3136, 3790 |
| KspAI | GTTAAC | 1 cut(s) | 2050 |
| LguI | GCTCTTC | 1 cut(s) | 2133 |
| LmnI | GCTCC | 8 cut(s) | 987, 1656, 1748, 2382, 2605, 3382, 4047, 4672 |
| MabI | ACCWGGT | 2 cut(s) | 2209, 4456 |
| MaeII | ACGT | 3 cut(s) | 1210, 4373, 4611 |
| MfeI | CAATTG | 2 cut(s) | 2583, 4197 |
| MflI | RGATCY | 3 cut(s) | 1930, 2096, 3835 |
| MlyI | GAGTC | 7 cut(s) | 43, 806, 2066, 2436, 2605, 2703, 2876 |
| MmeI | TCCRAC | 6 cut(s) | 264, 2275, 2387, 2805, 3539, 4500 |
| Mph1103I | ATGCAT | 5 cut(s) | 6, 537, 1971, 2247, 2862 |
| MroNI | GCCGGC | 1 cut(s) | 420 |
| MslI | CAYNNNNRTG | 6 cut(s) | 324, 1323, 2475, 2855, 3093, 3406 |
| MspA1I | CMGCKG | 7 cut(s) | 2123, 2336, 3302, 3572, 3596, 3662, 4148 |
| MspI | CCGG | 9 cut(s) | 421, 676, 886, 1091, 1504, 1668, 3589, 4022, 4413 |
| MunI | CAATTG | 2 cut(s) | 2583, 4197 |
| Mva1269I | GAATGC | 5 cut(s) | 1318, 1969, 2860, 3272, 4425 |
| MvnI | CGCG | 2 cut(s) | 2145, 3787 |
| NaeI | GCCGGC | 1 cut(s) | 422 |
| NciI | CCSGG | 2 cut(s) | 677, 1504 |
| NcoI | CCATGG | 1 cut(s) | 4631 |
| NgoMIV | GCCGGC | 1 cut(s) | 420 |
| NmeAIII | GCCGAG | 1 cut(s) | 3286 |
| NmuCI | GTSAC | 8 cut(s) | 743, 1034, 1461, 1522, 2115, 2608, 4150, 4612 |
| NsiI | ATGCAT | 5 cut(s) | 6, 537, 1971, 2247, 2862 |
| NspI | RCATGY | 4 cut(s) | 46, 539, 2249, 3203 |
| NspV | TTCGAA | 1 cut(s) | 86 |
| OliI | CACNNNNGTG | 1 cut(s) | 3093 |
| PaeI | GCATGC | 2 cut(s) | 539, 2249 |
| PaeR7I | CTCGAG | 2 cut(s) | 2457, 3722 |
| PaqCI | CACCTGC | 1 cut(s) | 4370 |
| PciI | ACATGT | 2 cut(s) | 42, 3199 |
| PciSI | GCTCTTC | 1 cut(s) | 2133 |
| PctI | GAATGC | 5 cut(s) | 1318, 1969, 2860, 3272, 4425 |
| PdiI | GCCGGC | 1 cut(s) | 422 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 4178 |
| PfoI | TCCNGGA | 1 cut(s) | 1502 |
| PleI | GAGTC | 7 cut(s) | 42, 806, 2065, 2435, 2605, 2702, 2875 |
| PpsI | GAGTC | 7 cut(s) | 42, 806, 2065, 2435, 2605, 2702, 2875 |
| PpuMI | RGGWCCY | 3 cut(s) | 2449, 4229, 4454 |
| PscI | ACATGT | 2 cut(s) | 42, 3199 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2737 |
| PshBI | ATTAAT | 2 cut(s) | 480, 1865 |
| Psp124BI | GAGCTC | 3 cut(s) | 1355, 1661, 1753 |
| Psp5II | RGGWCCY | 3 cut(s) | 2449, 4229, 4454 |
| PspEI | GGTNACC | 2 cut(s) | 1287, 2115 |
| PspOMI | GGGCCC | 1 cut(s) | 2554 |
| PspPPI | RGGWCCY | 3 cut(s) | 2449, 4229, 4454 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 4488, 4520 |
| PstI | CTGCAG | 4 cut(s) | 2164, 3061, 3286, 3502 |
| PstNI | CAGNNNCTG | 3 cut(s) | 2396, 3404, 4583 |
| PsuI | RGATCY | 3 cut(s) | 1930, 2096, 3835 |
| PvuII | CAGCTG | 3 cut(s) | 3596, 3662, 4148 |
| RsaI | GTAC | 4 cut(s) | 1999, 2038, 3705, 4705 |
| RsaNI | GTAC | 4 cut(s) | 1998, 2037, 3704, 4704 |
| RseI | CAYNNNNRTG | 6 cut(s) | 324, 1323, 2475, 2855, 3093, 3406 |
| SacI | GAGCTC | 3 cut(s) | 1355, 1661, 1753 |
| SapI | GCTCTTC | 1 cut(s) | 2133 |
| SchI | GAGTC | 7 cut(s) | 43, 806, 2066, 2436, 2605, 2703, 2876 |
| SexAI | ACCWGGT | 2 cut(s) | 2209, 4456 |
| SfcI | CTRYAG | 6 cut(s) | 2160, 3057, 3282, 3498, 3657, 4267 |
| Sfr274I | CTCGAG | 2 cut(s) | 2457, 3722 |
| SfuI | TTCGAA | 1 cut(s) | 86 |
| SlaI | CTCGAG | 2 cut(s) | 2457, 3722 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 324, 1323, 2475, 2855, 3093, 3406 |
| SmlI | CTYRAG | 6 cut(s) | 522, 651, 2444, 2457, 3722, 3738 |
| SmoI | CTYRAG | 6 cut(s) | 522, 651, 2444, 2457, 3722, 3738 |
| SphI | GCATGC | 2 cut(s) | 539, 2249 |
| SsiI | CCGC | 7 cut(s) | 1147, 1914, 2121, 2334, 3300, 3572, 4701 |
| SspI | AATATT | 2 cut(s) | 1414, 3895 |
| SstI | GAGCTC | 3 cut(s) | 1355, 1661, 1753 |
| StyI | CCWWGG | 7 cut(s) | 1283, 1402, 1706, 2250, 4484, 4631, 4754 |
| TaiI | ACGT | 3 cut(s) | 1213, 4376, 4614 |
| TauI | GCSGC | 2 cut(s) | 2336, 3575 |
| TseFI | GTSAC | 8 cut(s) | 743, 1034, 1461, 1522, 2115, 2608, 4150, 4612 |
| Tsp45I | GTSAC | 8 cut(s) | 743, 1034, 1461, 1522, 2115, 2608, 4150, 4612 |
| TspGWI | ACGGA | 4 cut(s) | 46, 129, 1123, 4427 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 4178 |
| VneI | GTGCAC | 1 cut(s) | 2919 |
| VspI | ATTAAT | 2 cut(s) | 480, 1865 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 4711, 4728 |
| XapI | RAATTY | 5 cut(s) | 88, 303, 923, 3111, 3374 |
| XceI | RCATGY | 4 cut(s) | 46, 539, 2249, 3203 |
| XhoI | CTCGAG | 2 cut(s) | 2457, 3722 |
| XmaJI | CCTAGG | 1 cut(s) | 1706 |
| XmiI | GTMKAC | 3 cut(s) | 810, 2846, 4266 |
| Zsp2I | ATGCAT | 5 cut(s) | 6, 537, 1971, 2247, 2862 |