Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0011815

Physical Location & Seq

Genomic Coordinates Reverse (-)

19044331 .. 19049454

Gene Structure 5124 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G51310.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2373 bp

ATGATCGCCGACGACGATGAGAAGTGGCTTGCCGCCGCAATCGCCGCCGTTAAGCAAAATGCTTTCTATATGCAGCGCGCTATCGACTCCAACAATCTCAAAGACGCTCTAAAGTTTTCTGCTCAAATGCTCAGCGAGCTTCGTACTTCCAAGCTTTCTCCTCATAAATACTATGAACTCTATATGCGAGTTTTTAATGAATTGGGGACTTTGGAGATATTCTTCAAGGAAGAGACGGGACGTGGTTGCTCCATCGCAGAGCTCTACGAGTTAGTTCAGCATGCCGGTAACATTTTGCCAAGATTGTATCTTTTATGTACCATAGGATCTGTATATATCAAATCCAAGGATGTTACTGCTACGGATATACTTAAGGATCTTGTTGAAATGTGTCGAGCTGTTCAACATCCCTTGCGTGGTCTTTTCTTGAGAAGTTATCTTGCTCAAGTTACTAGGGATAAGTTACCCAGCATTGGTTCTGACTTGGAAGGAGATGGTGATGCACACATGAATGCTTTAGAGTTCGTGCTTCAAAATTTTACCGAGATGAACAAATTATGGGTTCGAATGCAACATCAGGGACCTAGTCGGGAGAAAGAAAAACGTGAGAAAGAAAGGAATGAACTACGTGATCTTGTTGGTAAGAACCTTCATGTACTGAGTCAGTTAGAAGGTGTTGACCTTGGAATCTACAGAGATACTGTTCTTCCTAGAATACTGGAGCAGGTTGTCAACTGTAAGGATGAACTTGCACAGTGCTACCTTATGGATTGCATTATTCAAGTCTTTCCTGATGATTTTCACCTTCAAACTCTCGATGTATTATTGGGAGCTTGTCCACAACTTCAGCCGTCTGTTGATATCAAGACGGTTCTTTCGGGTCTAATGGAAAGGCTTTCGAACTATGCTGCATCCAGTGTGGAAGCATTGCCTAATTTCCTGCAAGTAGAAGCCTTTTCAAAGTTAAATTATGCCATTGGGAAGGTTGTAGAAGCACAGGCGGACTTGCCGGCCGCAGCATCTGTAACATTGTATTTGTTTCTTCTAAAATTCACTCTCCATGTCTATTCCGATCGTCTGGACTATGTGGACCAAGTTTTGGGATCATGTGTTACTCAACTATCTGCCACAGGAAAGCTTTGTGATGACAAGGCAGCAAAACAGATCGTCGCATTTCTTAGCGCTCCATTGGAAAAGTATAATAATGTAGTAACTATCTTGAAGCTTACCAACTATCCTCTAGTAATGGAATACCTTGACCGTGAGACAAACAAAGCAATGGCAATCATTCTAGTTCAGAGCGTTTTTAAAAATAATACTCACATTGCTACTGCTGATGAGGTCGATGCATTGTTTGAACTGGCAAAGGGTCTCATGAAGGATTTTGACGGAACAATTGATGATGAGATTGATGAAGAAGATTTCCAGGAAGAGCAGAACCTTGTTGCACGGCTTGTTAACAAGCTCTACATTGATGATCCAGAAGAAATGTCTAAGATTATTTTCACTGTAAGGAAGCACATCGTGGCTGGAGGACCTAAGCGTTTGCCTTTAACTATACCACCCCTTGTCTTTTCCGCGCTCAAGTTAATTCGGCGACTGCGAGGTGGAGATGAAAACCCATTTGGAGATGATGCATCAGCAACACCGAAGAGAATTCTACAGCTGTTAAGCGAGACGGTGGAAGTTCTATCTGATGTTTCCGCACCTGATTTGGCATTGCGCCTCTACTTGCAGTGTGCTCAGGCAGCAAATAACTGTGAGTTAGAAACAGTTGCTTATGAGTTCTTCACAAAGGCATATCTTCTGTATGAAGAAGAAATTTCAGATTCAAAGGCACAAGTAACAGCACTACGTTTAATAATAGGGACACTCCAGAGGATGCGTGTATTTAATGTTGAGAACAGAGATACTCTGACTCACAAGGCGACAGGGTATTCTGCAAGACTCCTAAGGAAGCCAGATCAGTGTAGAGCTGTTTATGAATGTGCGCATCTCTTCTGGGCTGACGAATGCGAGAACCTGAAAGATGGAGAGAGGGTTGTGCTTTGCCTGAAGAGGGCACAAAGGATTGCAGATGCTGTTCAACAAATGGCCAACGCATCCCGTGGTACCAGTAGCACTGGGTCGGTGTCTCTATATGTCGAACTGCTGAACAAGTATCTCTACTTCCTGGAGAAAGGAAACCAACAAGTAACAGGCGATACAATCAAGAGCTTAGCTGAATTAATCAAAAGCGAGACAAAGAAGGTTGAGTCAGGCGCAGAGCCATTCATAAATAGTACTCTACGTTACATCGAGTTTCAGAGACAGCAAGAAGATGGTGGCATGAATGAGAAATACGAGAAAATCAAAATGGAATGGTTTGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005770 GO:0005771 GO:0006810 GO:0006886 GO:0008104 GO:0008150 GO:0008565 GO:0010008 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016192 GO:0016197 GO:0016482 GO:0030904 GO:0031090 GO:0031410 GO:0031982 GO:0032991 GO:0033036 GO:0034613 GO:0042147 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0070727 GO:0071702 GO:0071705 GO:0097708 GO:0098588 GO:0098796 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko04144 map04144

Pfam Domains

Protein Families

Vps35

Protein Analysis

790

Amino Acids

89.4

Weight (kDa)

5.21

Isoelectric Point (pI)

32.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Vps35	PF03635	9 - 746	2.1e-276	Vacuolar protein sorting-associated protein 35

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011815)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17790 AT3G51310
fragaria_vesca	FvH4_1g11410
malus_domestica	MD02G1126400.v1.1 MD15G1242400.v1.1
prunus_persica	Prupe.7G171800_v2.0.a1 Prupe.7G171800_v2.0.a1
pyrus_communis	pycom02g09870 pycom15g21360
rosa_chinensis	RchiOBHm_Chr2g0098981
rosa_laevigata	RLG00000016838
rosa_multiflora	Rmu_sc0000577.1_g000009
rosa_roxburghii	Rroxscaffold_2G00143530
rosa_rugosa	Rorug02G0075400
rosa_samantha	Rh2AG124900 Rh2BG128100 Rh2CG129000 Rh2DG129200
rosa_wichuraiana	Rw2G009590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1992
Acc36I	ACCTGC	1 cut(s)	715
Acc65I	GGTACC	1 cut(s)	2111
AccB1I	GGYRCC	1 cut(s)	2111
AccB7I	CCANNNNNTGG	1 cut(s)	1099
AccII	CGCG	2 cut(s)	78, 1580
AciI	CCGC	7 cut(s)	33, 36, 45, 1001, 1014, 1578, 1704
AclWI	GGATC	4 cut(s)	334, 384, 1111, 1472
AcoI	YGGCCR	2 cut(s)	1011, 2094
AcsI	RAATTY	4 cut(s)	535, 1049, 1656, 1821
AcuI	CTGAAG	2 cut(s)	830, 2075
AdeI	CACNNNGTG	1 cut(s)	1525
AfaI	GTAC	5 cut(s)	145, 319, 657, 2113, 2284
AfeI	AGCGCT	1 cut(s)	1183
AfiI	CCNNNNNNNGG	4 cut(s)	416, 473, 1099, 2059
AflII	CTTAAG	1 cut(s)	371
AjiI	CACGTC	1 cut(s)	242
AjnI	CCWGG	2 cut(s)	1425, 2172
AjuI	GAANNNNNNNTTGG	2 cut(s)	1608, 1640
Alw21I	GWGCWC	2 cut(s)	264, 1744
Alw26I	GTCTC	7 cut(s)	227, 1259, 1376, 1670, 2139, 2234, 2302
AlwI	GGATC	4 cut(s)	334, 384, 1111, 1472
AlwNI	CAGNNNCTG	2 cut(s)	1022, 2081
Aor51HI	AGCGCT	1 cut(s)	1183
AoxI	GGCC	2 cut(s)	1011, 2094
ApeKI	GCWGC	5 cut(s)	73, 908, 1016, 1154, 1748
ApoI	RAATTY	4 cut(s)	535, 1049, 1656, 1821
ArsI	GACNNNNNNTTYG	2 cut(s)	859, 891
AseI	ATTAAT	1 cut(s)	2228
Asp718I	GGTACC	1 cut(s)	2111
AspLEI	GCGC	7 cut(s)	78, 80, 1184, 1582, 1725, 1993, 2264
AspS9I	GGNCC	3 cut(s)	581, 1090, 1535
AsuHPI	GGTGA	2 cut(s)	509, 794
AsuII	TTCGAA	2 cut(s)	565, 899
AvaII	GGWCC	3 cut(s)	581, 1090, 1535
AxyI	CCTNAGG	1 cut(s)	1952
BaeGI	GKGCMC	1 cut(s)	2065
BalI	TGGCCA	1 cut(s)	2096
BanI	GGYRCC	1 cut(s)	2111
BanII	GRGCYC	1 cut(s)	264
BarI	GAAGNNNNNNTAC	2 cut(s)	2153, 2185
Bbv12I	GWGCWC	2 cut(s)	264, 1744
BbvI	GCAGC	5 cut(s)	85, 895, 1028, 1166, 1760
BccI	CCATC	4 cut(s)	260, 488, 2024, 2315
BceAI	ACGGC	3 cut(s)	32, 835, 1466
BciT130I	CCWGG	2 cut(s)	1427, 2174
BcoDI	GTCTC	7 cut(s)	227, 1259, 1376, 1670, 2139, 2234, 2302
BfaI	CTAG	5 cut(s)	453, 585, 711, 1241, 1292
BfmI	CTRYAG	2 cut(s)	691, 1661
BfoI	RGCGCY	1 cut(s)	1185
BfrI	CTTAAG	1 cut(s)	371
BfuAI	ACCTGC	1 cut(s)	715
BisI	GCNGC	9 cut(s)	33, 36, 45, 74, 909, 1014, 1017, 1155, 1749
BlpI	GCTNAGC	2 cut(s)	131, 2218
BlsI	GCNGC	9 cut(s)	34, 37, 46, 75, 910, 1015, 1018, 1156, 1750
BmcAI	AGTACT	1 cut(s)	2284
Bme1390I	CCNGG	2 cut(s)	1427, 2174
Bme18I	GGWCC	3 cut(s)	581, 1090, 1535
BmgBI	CACGTC	1 cut(s)	242
BmgT120I	GGNCC	3 cut(s)	581, 1090, 1535
BmiI	GGNNCC	2 cut(s)	582, 2113
BmrFI	CCNGG	2 cut(s)	1427, 2174
BmrI	ACTGGG	1 cut(s)	2133
BmuI	ACTGGG	1 cut(s)	2133
BpmI	CTGGAG	4 cut(s)	740, 1551, 1859, 2195
Bpu10I	CCTNAGC	2 cut(s)	1539, 1743
Bpu1102I	GCTNAGC	2 cut(s)	131, 2218
Bpu14I	TTCGAA	2 cut(s)	565, 899
BpuEI	CTTGAG	3 cut(s)	429, 448, 1568
BsaAI	YACGTR	1 cut(s)	629
BsaI	GGTCTC	1 cut(s)	1376
BsaJI	CCNNGG	3 cut(s)	345, 682, 2107
BsaXI	ACNNNNNCTCC	2 cut(s)	2025, 2055
Bsc4I	CCNNNNNNNGG	4 cut(s)	416, 473, 1099, 2059
Bse118I	RCCGGY	2 cut(s)	284, 1009
Bse1I	ACTGG	5 cut(s)	723, 915, 1365, 2115, 2128
Bse21I	CCTNAGG	1 cut(s)	1952
Bse3DI	GCAATG	4 cut(s)	926, 1284, 1323, 1718
BseBI	CCWGG	2 cut(s)	1427, 2174
BseDI	CCNNGG	3 cut(s)	345, 682, 2107
BseGI	GGATG	6 cut(s)	355, 406, 748, 911, 1887, 2102
BseLI	CCNNNNNNNGG	4 cut(s)	416, 473, 1099, 2059
BseMI	GCAATG	4 cut(s)	926, 1284, 1323, 1718
BseMII	CTCAG	3 cut(s)	145, 650, 1757
BseNI	ACTGG	5 cut(s)	723, 915, 1365, 2115, 2128
BsePI	GCGCGC	1 cut(s)	76
BseRI	GAGGAG	1 cut(s)	150
BseSI	GKGCMC	1 cut(s)	2065
BseX3I	CGGCCG	1 cut(s)	1011
BseXI	GCAGC	5 cut(s)	85, 895, 1028, 1166, 1760
BseYI	CCCAGC	1 cut(s)	467
Bsh1236I	CGCG	2 cut(s)	78, 1580
Bsh1285I	CGRYCG	2 cut(s)	1014, 1075
BshFI	GGCC	2 cut(s)	1013, 2096
BshNI	GGYRCC	1 cut(s)	2111
BsiEI	CGRYCG	2 cut(s)	1014, 1075
BsiHKAI	GWGCWC	2 cut(s)	264, 1744
BsiSI	CCGG	2 cut(s)	285, 1010
BslFI	GGGAC	4 cut(s)	220, 252, 594, 1882
BslI	CCNNNNNNNGG	4 cut(s)	416, 473, 1099, 2059
BsmAI	GTCTC	7 cut(s)	227, 1259, 1376, 1670, 2139, 2234, 2302
BsmBI	CGTCTC	2 cut(s)	227, 1670
BsmFI	GGGAC	4 cut(s)	220, 252, 594, 1882
BsmI	GAATGC	3 cut(s)	517, 573, 2018
BsnI	GGCC	2 cut(s)	1013, 2096
Bso31I	GGTCTC	1 cut(s)	1376
Bsp119I	TTCGAA	2 cut(s)	565, 899
Bsp1286I	GDGCHC	3 cut(s)	264, 1744, 2065
Bsp143I	GATC	9 cut(s)	3, 326, 376, 631, 1072, 1103, 1164, 1477, 1963
Bsp1720I	GCTNAGC	2 cut(s)	131, 2218
BspACI	CCGC	7 cut(s)	33, 36, 45, 1001, 1014, 1578, 1704
BspANI	GGCC	2 cut(s)	1013, 2096
BspCNI	CTCAG	3 cut(s)	144, 651, 1756
BspFNI	CGCG	2 cut(s)	78, 1580
BspHI	TCATGA	1 cut(s)	1374
BspLI	GGNNCC	2 cut(s)	582, 2113
BspMI	ACCTGC	1 cut(s)	715
BspPI	GGATC	4 cut(s)	334, 384, 1111, 1472
BspQI	GCTCTTC	1 cut(s)	1425
BspT104I	TTCGAA	2 cut(s)	565, 899
BspT107I	GGYRCC	1 cut(s)	2111
BspTI	CTTAAG	1 cut(s)	371
BspTNI	GGTCTC	1 cut(s)	1376
BsrDI	GCAATG	4 cut(s)	926, 1284, 1323, 1718
BsrFI	RCCGGY	2 cut(s)	284, 1009
BsrI	ACTGG	5 cut(s)	723, 915, 1365, 2115, 2128
BssAI	RCCGGY	2 cut(s)	284, 1009
BssECI	CCNNGG	3 cut(s)	345, 682, 2107
BssHII	GCGCGC	1 cut(s)	76
BssMI	GATC	9 cut(s)	3, 326, 376, 631, 1072, 1103, 1164, 1477, 1963
BssT1I	CCWWGG	2 cut(s)	345, 682
Bst2UI	CCWGG	2 cut(s)	1427, 2174
Bst4CI	ACNGT	9 cut(s)	703, 737, 756, 871, 1262, 1510, 1681, 1760, 1774
Bst6I	CTCTTC	5 cut(s)	225, 1425, 1646, 2003, 2051
BstAFI	CTTAAG	1 cut(s)	371
BstBAI	YACGTR	1 cut(s)	629
BstBI	TTCGAA	2 cut(s)	565, 899
BstC8I	GCNNGC	5 cut(s)	30, 78, 137, 282, 1011
BstDEI	CTNAG	8 cut(s)	131, 659, 1178, 1494, 1539, 1743, 1952, 2218
BstDSI	CCRYGG	1 cut(s)	2107
BstF5I	GGATG	6 cut(s)	355, 406, 748, 911, 1887, 2102
BstFNI	CGCG	2 cut(s)	78, 1580
BstH2I	RGCGCY	1 cut(s)	1185
BstHHI	GCGC	7 cut(s)	78, 80, 1184, 1582, 1725, 1993, 2264
BstKTI	GATC	9 cut(s)	6, 329, 379, 634, 1075, 1106, 1167, 1480, 1966
BstMAI	GTCTC	7 cut(s)	227, 1259, 1376, 1670, 2139, 2234, 2302
BstMBI	GATC	9 cut(s)	3, 326, 376, 631, 1072, 1103, 1164, 1477, 1963
BstMCI	CGRYCG	2 cut(s)	1014, 1075
BstMWI	GCNNNNNNNGC	4 cut(s)	41, 44, 136, 1748
BstNI	CCWGG	2 cut(s)	1427, 2174
BstNSI	RCATGY	1 cut(s)	284
BstSCI	CCNGG	2 cut(s)	1425, 2172
BstSFI	CTRYAG	2 cut(s)	691, 1661
BstSLI	GKGCMC	1 cut(s)	2065
BstUI	CGCG	2 cut(s)	78, 1580
BstV1I	GCAGC	5 cut(s)	85, 895, 1028, 1166, 1760
BstX2I	RGATCY	2 cut(s)	326, 376
BstYI	RGATCY	2 cut(s)	326, 376
BstZI	CGGCCG	1 cut(s)	1011
Bsu36I	CCTNAGG	1 cut(s)	1952
BsuRI	GGCC	2 cut(s)	1013, 2096
BtgI	CCRYGG	1 cut(s)	2107
BtgZI	GCGATG	1 cut(s)	238
BtrI	CACGTC	1 cut(s)	242
BtsCI	GGATG	6 cut(s)	355, 406, 748, 911, 1887, 2102
BtsI	GCAGTG	1 cut(s)	1742
BtsIMutI	CAGTG	6 cut(s)	761, 922, 1506, 1742, 1973, 2121
BveI	ACCTGC	1 cut(s)	715
Cac8I	GCNNGC	5 cut(s)	30, 78, 137, 282, 1011
CaiI	CAGNNNCTG	2 cut(s)	1022, 2081
CciI	TCATGA	1 cut(s)	1374
CfoI	GCGC	7 cut(s)	78, 80, 1184, 1582, 1725, 1993, 2264
Cfr10I	RCCGGY	2 cut(s)	284, 1009
Cfr13I	GGNCC	3 cut(s)	581, 1090, 1535
CseI	GACGC	1 cut(s)	113
Csp6I	GTAC	5 cut(s)	144, 318, 656, 2112, 2283
CviAII	CATG	7 cut(s)	281, 508, 653, 1061, 1107, 1375, 2329
CviQI	GTAC	5 cut(s)	144, 318, 656, 2112, 2283
DdeI	CTNAG	8 cut(s)	131, 659, 1178, 1494, 1539, 1743, 1952, 2218
DpnI	GATC	9 cut(s)	5, 328, 378, 633, 1074, 1105, 1166, 1479, 1965
DpnII	GATC	9 cut(s)	3, 326, 376, 631, 1072, 1103, 1164, 1477, 1963
DraI	TTTAAA	1 cut(s)	1309
DraIII	CACNNNGTG	1 cut(s)	1525
EaeI	YGGCCR	2 cut(s)	1011, 2094
EagI	CGGCCG	1 cut(s)	1011
Eam1104I	CTCTTC	5 cut(s)	225, 1425, 1646, 2003, 2051
EarI	CTCTTC	5 cut(s)	225, 1425, 1646, 2003, 2051
EciI	GGCGGA	1 cut(s)	1016
Ecl136II	GAGCTC	1 cut(s)	262
EclXI	CGGCCG	1 cut(s)	1011
Eco130I	CCWWGG	2 cut(s)	345, 682
Eco24I	GRGCYC	1 cut(s)	264
Eco31I	GGTCTC	1 cut(s)	1376
Eco32I	GATATC	1 cut(s)	862
Eco47I	GGWCC	3 cut(s)	581, 1090, 1535
Eco47III	AGCGCT	1 cut(s)	1183
Eco52I	CGGCCG	1 cut(s)	1011
Eco53kI	GAGCTC	1 cut(s)	262
Eco57I	CTGAAG	2 cut(s)	830, 2075
Eco81I	CCTNAGG	1 cut(s)	1952
EcoICRI	GAGCTC	1 cut(s)	262
EcoO109I	RGGNCCY	2 cut(s)	581, 1535
EcoRI	GAATTC	1 cut(s)	1656
EcoRII	CCWGG	2 cut(s)	1425, 2172
EcoRV	GATATC	1 cut(s)	862
EcoT14I	CCWWGG	2 cut(s)	345, 682
EcoT22I	ATGCAT	2 cut(s)	1351, 1639
EcoT38I	GRGCYC	1 cut(s)	264
ErhI	CCWWGG	2 cut(s)	345, 682
Esp3I	CGTCTC	2 cut(s)	227, 1670
FaeI	CATG	7 cut(s)	284, 511, 656, 1064, 1110, 1378, 2332
FaqI	GGGAC	4 cut(s)	220, 252, 594, 1882
FatI	CATG	7 cut(s)	280, 507, 652, 1060, 1106, 1374, 2328
Fnu4HI	GCNGC	9 cut(s)	33, 36, 45, 74, 909, 1014, 1017, 1155, 1749
FokI	GGATG	6 cut(s)	362, 393, 755, 898, 1894, 2089
FriOI	GRGCYC	1 cut(s)	264
Fsp4HI	GCNGC	9 cut(s)	33, 36, 45, 74, 909, 1014, 1017, 1155, 1749
FspAI	RTGCGCAY	1 cut(s)	1992
FspBI	CTAG	5 cut(s)	453, 585, 711, 1241, 1292
FspI	TGCGCA	1 cut(s)	1992
GlaI	GCGC	7 cut(s)	77, 79, 1183, 1581, 1724, 1992, 2263
GluI	GCNGC	9 cut(s)	33, 36, 45, 74, 909, 1014, 1017, 1155, 1749
GsaI	CCCAGC	1 cut(s)	471
GsuI	CTGGAG	4 cut(s)	740, 1551, 1859, 2195
HaeII	RGCGCY	1 cut(s)	1185
HaeIII	GGCC	2 cut(s)	1013, 2096
HapII	CCGG	2 cut(s)	285, 1010
HgaI	GACGC	1 cut(s)	113
HhaI	GCGC	7 cut(s)	78, 80, 1184, 1582, 1725, 1993, 2264
Hin1II	CATG	7 cut(s)	284, 511, 656, 1064, 1110, 1378, 2332
Hin6I	GCGC	7 cut(s)	76, 78, 1182, 1580, 1723, 1991, 2262
HinP1I	GCGC	7 cut(s)	76, 78, 1182, 1580, 1723, 1991, 2262
HincII	GTYRAC	3 cut(s)	679, 733, 1459
HindII	GTYRAC	3 cut(s)	679, 733, 1459
HindIII	AAGCTT	3 cut(s)	152, 1136, 1223
HinfI	GANTC	7 cut(s)	86, 661, 687, 1829, 1918, 1947, 2255
HpaI	GTTAAC	1 cut(s)	1459
HpaII	CCGG	2 cut(s)	285, 1010
HphI	GGTGA	2 cut(s)	509, 794
Hpy166II	GTNNAC	5 cut(s)	679, 733, 839, 1090, 1459
Hpy188I	TCNGA	7 cut(s)	481, 1072, 1299, 1696, 1828, 1917, 2307
Hpy8I	GTNNAC	5 cut(s)	679, 733, 839, 1090, 1459
Hpy99I	CGWCG	3 cut(s)	14, 17, 1172
HpyAV	CCTTC	7 cut(s)	482, 659, 665, 815, 976, 1372, 2242
HpyCH4III	ACNGT	9 cut(s)	703, 737, 756, 871, 1262, 1510, 1681, 1760, 1774
HpyCH4IV	ACGT	5 cut(s)	241, 604, 628, 1855, 2290
HpyF10VI	GCNNNNNNNGC	4 cut(s)	41, 44, 136, 1748
HpyF3I	CTNAG	8 cut(s)	131, 659, 1178, 1494, 1539, 1743, 1952, 2218
HpySE526I	ACGT	5 cut(s)	241, 604, 628, 1855, 2290
Hsp92II	CATG	7 cut(s)	284, 511, 656, 1064, 1110, 1378, 2332
HspAI	GCGC	7 cut(s)	76, 78, 1182, 1580, 1723, 1991, 2262
KpnI	GGTACC	1 cut(s)	2115
KroI	GCCGGC	1 cut(s)	1009
KroNI	GCCGGC	1 cut(s)	1011
KspAI	GTTAAC	1 cut(s)	1459
Kzo9I	GATC	9 cut(s)	3, 326, 376, 631, 1072, 1103, 1164, 1477, 1963
LguI	GCTCTTC	1 cut(s)	1425
LmnI	GCTCC	4 cut(s)	254, 721, 830, 1189
Lsp1109I	GCAGC	5 cut(s)	85, 895, 1028, 1166, 1760
MaeI	CTAG	5 cut(s)	453, 585, 711, 1241, 1292
MaeII	ACGT	5 cut(s)	241, 604, 628, 1855, 2290
MalI	GATC	9 cut(s)	5, 328, 378, 633, 1074, 1105, 1166, 1479, 1965
MboI	GATC	9 cut(s)	3, 326, 376, 631, 1072, 1103, 1164, 1477, 1963
MfeI	CAATTG	1 cut(s)	1395
MflI	RGATCY	2 cut(s)	326, 376
MhlI	GDGCHC	3 cut(s)	264, 1744, 2065
MlsI	TGGCCA	1 cut(s)	2096
MluNI	TGGCCA	1 cut(s)	2096
MlyI	GAGTC	5 cut(s)	80, 670, 1912, 1941, 2264
MmeI	TCCRAC	1 cut(s)	114
MnlI	CCTC	9 cut(s)	171, 1248, 1333, 1526, 1598, 1736, 1872, 2031, 2052
Mox20I	TGGCCA	1 cut(s)	2096
Mph1103I	ATGCAT	2 cut(s)	1351, 1639
MroNI	GCCGGC	1 cut(s)	1009
MscI	TGGCCA	1 cut(s)	2096
MslI	CAYNNNNRTG	1 cut(s)	510
Msp20I	TGGCCA	1 cut(s)	2096
MspA1I	CMGCKG	1 cut(s)	1666
MspCI	CTTAAG	1 cut(s)	371
MspI	CCGG	2 cut(s)	285, 1010
MspR9I	CCNGG	2 cut(s)	1427, 2174
MunI	CAATTG	1 cut(s)	1395
Mva1269I	GAATGC	3 cut(s)	517, 573, 2018
MvaI	CCWGG	2 cut(s)	1427, 2174
MvnI	CGCG	2 cut(s)	78, 1580
MwoI	GCNNNNNNNGC	4 cut(s)	41, 44, 136, 1748
NaeI	GCCGGC	1 cut(s)	1011
NdeII	GATC	9 cut(s)	3, 326, 376, 631, 1072, 1103, 1164, 1477, 1963
NgoMIV	GCCGGC	1 cut(s)	1009
NlaIII	CATG	7 cut(s)	284, 511, 656, 1064, 1110, 1378, 2332
NlaIV	GGNNCC	2 cut(s)	582, 2113
NsbI	TGCGCA	1 cut(s)	1992
NsiI	ATGCAT	2 cut(s)	1351, 1639
NspI	RCATGY	1 cut(s)	284
NspV	TTCGAA	2 cut(s)	565, 899
PaeI	GCATGC	1 cut(s)	284
PagI	TCATGA	1 cut(s)	1374
PauI	GCGCGC	1 cut(s)	76
PciSI	GCTCTTC	1 cut(s)	1425
PcsI	WCGNNNNNNNCGW	2 cut(s)	12, 1600
PctI	GAATGC	3 cut(s)	517, 573, 2018
PdiI	GCCGGC	1 cut(s)	1011
PfeI	GAWTC	2 cut(s)	687, 1829
PflFI	GACNNNGTC	1 cut(s)	585
PflMI	CCANNNNNTGG	1 cut(s)	1099
PfoI	TCCNGGA	2 cut(s)	1425, 2172
PkrI	GCNGC	9 cut(s)	34, 37, 46, 75, 910, 1015, 1018, 1156, 1750
Ple19I	CGATCG	1 cut(s)	1075
PleI	GAGTC	5 cut(s)	80, 669, 1912, 1941, 2263
PpsI	GAGTC	5 cut(s)	80, 669, 1912, 1941, 2263
Ppu21I	YACGTR	1 cut(s)	629
PpuMI	RGGWCCY	2 cut(s)	581, 1535
PshBI	ATTAAT	1 cut(s)	2228
Psp124BI	GAGCTC	1 cut(s)	264
Psp5II	RGGWCCY	2 cut(s)	581, 1535
Psp6I	CCWGG	2 cut(s)	1425, 2172
PspFI	CCCAGC	1 cut(s)	467
PspGI	CCWGG	2 cut(s)	1425, 2172
PspN4I	GGNNCC	2 cut(s)	582, 2113
PspPI	GGNCC	3 cut(s)	581, 1090, 1535
PspPPI	RGGWCCY	2 cut(s)	581, 1535
PstNI	CAGNNNCTG	2 cut(s)	1022, 2081
PsuI	RGATCY	2 cut(s)	326, 376
PsyI	GACNNNGTC	1 cut(s)	585
PteI	GCGCGC	1 cut(s)	76
PvuI	CGATCG	1 cut(s)	1075
PvuII	CAGCTG	1 cut(s)	1666
RsaI	GTAC	5 cut(s)	145, 319, 657, 2113, 2284
RsaNI	GTAC	5 cut(s)	144, 318, 656, 2112, 2283
RseI	CAYNNNNRTG	1 cut(s)	510
SacI	GAGCTC	1 cut(s)	264
SapI	GCTCTTC	1 cut(s)	1425
SatI	GCNGC	9 cut(s)	33, 36, 45, 74, 909, 1014, 1017, 1155, 1749
Sau3AI	GATC	9 cut(s)	3, 326, 376, 631, 1072, 1103, 1164, 1477, 1963
Sau96I	GGNCC	3 cut(s)	581, 1090, 1535
ScaI	AGTACT	1 cut(s)	2284
SchI	GAGTC	5 cut(s)	80, 670, 1912, 1941, 2264
ScrFI	CCNGG	2 cut(s)	1427, 2174
SduI	GDGCHC	3 cut(s)	264, 1744, 2065
SfcI	CTRYAG	2 cut(s)	691, 1661
SfuI	TTCGAA	2 cut(s)	565, 899
SinI	GGWCC	3 cut(s)	581, 1090, 1535
SmiMI	CAYNNNNRTG	1 cut(s)	510
SmlI	CTYRAG	4 cut(s)	371, 427, 444, 1583
SmoI	CTYRAG	4 cut(s)	371, 427, 444, 1583
SphI	GCATGC	1 cut(s)	284
SsiI	CCGC	7 cut(s)	33, 36, 45, 1001, 1014, 1578, 1704
SspMI	CTAG	5 cut(s)	453, 585, 711, 1241, 1292
SstI	GAGCTC	1 cut(s)	264
StyD4I	CCNGG	2 cut(s)	1425, 2172
StyI	CCWWGG	2 cut(s)	345, 682
TaaI	ACNGT	9 cut(s)	703, 737, 756, 871, 1262, 1510, 1681, 1760, 1774
TaiI	ACGT	5 cut(s)	244, 607, 631, 1858, 2293
TaqI	TCGA	8 cut(s)	84, 394, 565, 816, 899, 1344, 2145, 2298
TatI	WGTACW	2 cut(s)	655, 2282
TauI	GCSGC	4 cut(s)	35, 38, 47, 1016
TfiI	GAWTC	2 cut(s)	687, 1829
TscAI	CASTG	6 cut(s)	761, 922, 1513, 1742, 1973, 2128
TseI	GCWGC	5 cut(s)	73, 908, 1016, 1154, 1748
TspGWI	ACGGA	2 cut(s)	377, 1404
TspRI	CASTG	6 cut(s)	761, 922, 1513, 1742, 1973, 2128
Tth111I	GACNNNGTC	1 cut(s)	585
Van91I	CCANNNNNTGG	1 cut(s)	1099
Vha464I	CTTAAG	1 cut(s)	371
VpaK11BI	GGWCC	3 cut(s)	581, 1090, 1535
VspI	ATTAAT	1 cut(s)	2228
XapI	RAATTY	4 cut(s)	535, 1049, 1656, 1821
XceI	RCATGY	1 cut(s)	284
XspI	CTAG	5 cut(s)	453, 585, 711, 1241, 1292
ZrmI	AGTACT	1 cut(s)	2284
Zsp2I	ATGCAT	2 cut(s)	1351, 1639

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.