Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0011815

Physical Location & Seq

Genomic Coordinates Reverse (-)

17307799 .. 17314776

Gene Structure 6978 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G171800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2379 bp

ATGGCTGGCAGCGGGAATCTCCGGCCTTCAACAAAACGCCTTCTATATGCATCGCGCTCTGGACTCGAACAATCTCAGAGATGCCCTCAAGTATTCAGCTCAGATGCTTTCGGAACTTCGAACCTCGAAGCTTTCCCCTCACAAATACTACGAACTCTTTTTTGGCTTGGTGATTTTGTGGTTTGGATGCCCTTAGATATGCGAGCGTTTGACGAATTGAGGAAATTGGAGATGTTCTTCAAGGAGGAGGCTCGGCGCGGTTGCTCCATTATCGATCTCTATGAGCTTGTGCAGCATGCTGGCAACATATTGCCCAGATTGTATCTTCTCTGTACAGTAGGATCTGTGTACATCAAATCTAAGGAGGCTCCTGCCAAGGATGTTCTGAAAGATCTCGTGGAAATGTCCAGGGGCATTCAGAATCCTGTACGTGGGCTTTTCTTAAGGAGTTACCTTTCTCAAGTGAGTAGGGATAAATTGCCTGATATTGGTTCTGAATATGAAGGAGATGCTGACACTGTCAAGGATGCTGTTGAGTTTGTGCTCCAAAATTTCACTGAGATGAACAAACTTTGGGTGCGGATGCAGCATCAGGGACCTGCCCGGGAAAAGGAGAAACGGGAGAAAGAAAGGAGCGAGCTACGTGATCTTGTTGGTAAAAACCTGCATGTCCTCAGCCAGATAGAAGGTGTCGATCTGGAGTTATACAAGGATACAGTACTTCCGAGAGTCTTGGAGCAGGTTGTCAATTGTAAAGATGAGCTTGCACAGTTTTATTTAATGGATTGCATAATTCAAGTCTTCCCGGATGAGTACCACTTGCAAACTCTTGATATATTATTGGGTGCTTGCCCTCAACTTCAGCCATCTGTTGATATCAAGACAGTTCTATCCCAATTAATGGAAAGGCTCTCAAATTATGCTGCTTCAAGTACAGAAGTGTTGCCTGAGTTTTTACAAGTAGAAGCTTTTTCCAAACTGAGCAACGCTATTGGAAAGGTGATTGAAGCACAAGTTGACATGCCTATCATAGGTGTTGTAACTTTATATTCATCTCTTCTTAAATTCACCCTCCATGTGCACCCTGATCGACTCGATTATGCTGATCAAGTGTTGGGATCATTTGTTAAGAAACTTTCTGGAAAAGGGAAAATTGAAGACAGCAGGGCTACAAAGCAAGTGGTTGCTCTTTTAAGCGCTCCACTTGAGAAATACAATGATATTGTCACTGCTTTGAAGCTTTCAAATTATCCACGTGTCCTAGAATTCCTTGATAGCGGAACAAATAAAGTCATGGCTACTGTTATAATTCAAAGCATTATGAAAAATACGACTCATGTTTTAACTGCTGAGAAGGTTGAGGCATTGTTTGAATTGATAAAAGGACTTATTGAGGATTTGGATGGAACTCCTGATGATGAGGTTGATGAAGAGGATTTCAAGGAGGAGCAAAATTCAGTTGCACGACTTATTCAAATGTTCTCTAATGATGATTCTGAAGAGATGTTCAAGATCATATGTACTGTGAAGAAGCACATCCTTACTGGAGGACCAAAGCGTCTACCTTTTACTGTCCCTCCCCTAGTTTTCTCTTCTCTAAAGTTGGTTAGGAAATTGCAAGCCCAGGATGAGAATCCTTTTGGAGATGAAGCATCAACCACACCAAAGAAACTTTTTCAGCTCTTGACTCAGACTATTGAGGCTCTGCTGAATGTTCCAGCACCTGAACTGGCATTACGGTTATACTTGCAATGTGCGGAGGCTGCAAATGACTGTGATTTGGAACCTGTTGCATATGAATTCTTCACCCAAGCATATATTCTTTACGAAGAAGAAATTTCAGATTCAAAAGCACAGGTGACTGCAATTCATTTGATTATTGGGACTCTCCAGAGGATGCATGTATTTGGTGTTGAGAACAGGGATACTTTAACTCACAAAGCCACAGGGTATTCGGCGAAGCTTTTAAAGAAGCCTGATCAGTGCCGAGCTGTTTATGCTTGCTCGCATCTCTTCTGGGTTGATGATCAAGAAACCATGAAGGATGGAGAAAGGGTACTGATTTGCCTAAAGCGAGCTTTAAGAATTGCAAATGCTGCCCAACAGATGTCCAATGCAACTCGGGGTAGCACCGGCCCAGTGGCGCTCTTTGTTGAAATACTGAACAAGTACCTATATTTCTTCGAGAAGGGGAACCCACAGATAACTGTTGCTTCAGTCCAAAGCCTGATTGAATTGATCACAACTGAACTGCATAGCGACTCGACCTCACCAGAGCCGGCTACAGATGCTTTCTTTGCCAGCACACTGCGGTACATCCAGTTCCAGAAGCAGAAAGGTGGCGCAGTTGGTGAAAGATACGAGTCCATCAAAGTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005770 GO:0005771 GO:0006810 GO:0006886 GO:0008104 GO:0008150 GO:0008565 GO:0010008 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016192 GO:0016197 GO:0016482 GO:0030904 GO:0031090 GO:0031410 GO:0031982 GO:0032991 GO:0033036 GO:0034613 GO:0042147 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0070727 GO:0071702 GO:0071705 GO:0097708 GO:0098588 GO:0098796 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko04144 map04144

Pfam Domains

Protein Families

Vps35

Protein Analysis

793

Amino Acids

89.27

Weight (kDa)

5.34

Isoelectric Point (pI)

44.34

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011815)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17790 AT3G51310
fragaria_vesca	FvH4_1g11410
malus_domestica	MD02G1126400.v1.1 MD15G1242400.v1.1
prunus_persica	Prupe.7G171800_v2.0.a1 Prupe.7G171800_v2.0.a1
pyrus_communis	pycom02g09870 pycom15g21360
rosa_chinensis	RchiOBHm_Chr2g0098981
rosa_laevigata	RLG00000016838
rosa_multiflora	Rmu_sc0000577.1_g000009
rosa_roxburghii	Rroxscaffold_2G00143530
rosa_rugosa	Rorug02G0075400
rosa_samantha	Rh2AG124900 Rh2BG128100 Rh2CG129000 Rh2DG129200
rosa_wichuraiana	Rw2G009590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1307
AasI	GACNNNNNNGTC	1 cut(s)	1557
Acc36I	ACCTGC	3 cut(s)	607, 672, 730
AccB7I	CCANNNNNTGG	1 cut(s)	901
AccI	GTMKAC	1 cut(s)	1561
AccII	CGCG	2 cut(s)	55, 258
AciI	CCGC	6 cut(s)	12, 258, 580, 1278, 1757, 2311
AclWI	GGATC	2 cut(s)	349, 1126
AcsI	RAATTY	6 cut(s)	550, 1064, 1265, 1453, 1799, 1836
AcuI	CTGAAG	3 cut(s)	845, 1518, 2199
AcvI	CACGTG	1 cut(s)	1256
AfeI	AGCGCT	1 cut(s)	1198
AfiI	CCNNNNNNNGG	5 cut(s)	431, 488, 610, 901, 1031
AflII	CTTAAG	1 cut(s)	442
AflIII	ACRYGT	1 cut(s)	1255
AjnI	CCWGG	2 cut(s)	407, 1623
AjuI	GAANNNNNNNTTGG	4 cut(s)	145, 177, 1803, 1835
Alw21I	GWGCWC	2 cut(s)	546, 1083
Alw44I	GTGCAC	1 cut(s)	1079
AlwI	GGATC	2 cut(s)	349, 1126
AlwNI	CAGNNNCTG	1 cut(s)	1724
Ama87I	CYCGRG	2 cut(s)	603, 2121
Aor51HI	AGCGCT	1 cut(s)	1198
AoxI	GGCC	2 cut(s)	23, 2134
ApaLI	GTGCAC	1 cut(s)	1079
ApeKI	GCWGC	6 cut(s)	9, 292, 586, 923, 1763, 2096
ApoI	RAATTY	6 cut(s)	550, 1064, 1265, 1453, 1799, 1836
AseI	ATTAAT	1 cut(s)	899
AspLEI	GCGC	5 cut(s)	57, 258, 1199, 2146, 2345
AspS9I	GGNCC	3 cut(s)	596, 1550, 2135
AsuC2I	CCSGG	3 cut(s)	604, 605, 806
AsuHPI	GGTGA	7 cut(s)	182, 1012, 1060, 1798, 1870, 2262, 2363
AsuII	TTCGAA	1 cut(s)	119
AvaI	CYCGRG	2 cut(s)	603, 2121
AvaII	GGWCC	2 cut(s)	596, 1550
BaeGI	GKGCMC	1 cut(s)	1083
BauI	CACGAG	1 cut(s)	395
BbrPI	CACGTG	1 cut(s)	1256
BbsI	GAAGAC	2 cut(s)	793, 1164
Bbv12I	GWGCWC	2 cut(s)	546, 1083
BbvCI	CCTCAGC	1 cut(s)	674
BbvI	GCAGC	6 cut(s)	21, 304, 598, 910, 1750, 2083
BccI	CCATC	4 cut(s)	874, 1397, 2039, 2375
BcgI	CGANNNNNNTGC	2 cut(s)	1070, 1104
BciT130I	CCWGG	2 cut(s)	409, 1625
BciVI	GTATCC	2 cut(s)	706, 1918
BclI	TGATCA	4 cut(s)	1105, 1978, 2026, 2238
BcnI	CCSGG	3 cut(s)	604, 605, 806
BfaI	CTAG	2 cut(s)	1262, 1583
BfmI	CTRYAG	1 cut(s)	2283
BfoI	RGCGCY	2 cut(s)	1200, 2147
BfrI	CTTAAG	1 cut(s)	442
BfuAI	ACCTGC	3 cut(s)	607, 672, 730
BfuI	GTATCC	2 cut(s)	706, 1918
BglII	AGATCT	1 cut(s)	391
BisI	GCNGC	6 cut(s)	10, 293, 587, 924, 1764, 2097
BlsI	GCNGC	6 cut(s)	11, 294, 588, 925, 1765, 2098
BmcAI	AGTACT	1 cut(s)	720
Bme1390I	CCNGG	5 cut(s)	409, 604, 605, 806, 1625
Bme18I	GGWCC	2 cut(s)	596, 1550
BmeT110I	CYCGRG	2 cut(s)	603, 2121
BmgT120I	GGNCC	3 cut(s)	596, 1550, 2135
BmiI	GGNNCC	4 cut(s)	369, 597, 1785, 2195
BmrFI	CCNGG	5 cut(s)	409, 604, 605, 806, 1625
BmrI	ACTGGG	1 cut(s)	2132
BmuI	ACTGGG	1 cut(s)	2132
BpiI	GAAGAC	2 cut(s)	793, 1164
BplI	GAGNNNNNCTC	2 cut(s)	70, 102
BpmI	CTGGAG	3 cut(s)	719, 1566, 1874
Bpu10I	CCTNAGC	1 cut(s)	674
Bpu14I	TTCGAA	1 cut(s)	119
BpuEI	CTTGAG	3 cut(s)	72, 444, 1226
BpuMI	CCSGG	3 cut(s)	604, 605, 806
Bsa29I	ATCGAT	1 cut(s)	273
BsaAI	YACGTR	3 cut(s)	431, 644, 1256
BsaBI	GATNNNNATC	1 cut(s)	1632
BsaJI	CCNNGG	4 cut(s)	375, 408, 603, 1623
BsaXI	ACNNNNNCTCC	4 cut(s)	1561, 1591, 2040, 2070
Bsc4I	CCNNNNNNNGG	5 cut(s)	431, 488, 610, 901, 1031
Bse118I	RCCGGY	2 cut(s)	2132, 2278
Bse1I	ACTGG	4 cut(s)	1549, 1734, 2138, 2320
Bse3DI	GCAATG	1 cut(s)	1757
Bse8I	GATNNNNATC	1 cut(s)	1632
BseBI	CCWGG	2 cut(s)	409, 1625
BseCI	ATCGAT	1 cut(s)	273
BseDI	CCNNGG	4 cut(s)	375, 408, 603, 1623
BseJI	GATNNNNATC	1 cut(s)	1632
BseLI	CCNNNNNNNGG	5 cut(s)	431, 488, 610, 901, 1031
BseMI	GCAATG	1 cut(s)	1757
BseMII	CTCAG	8 cut(s)	89, 114, 549, 688, 939, 971, 1341, 1703
BseNI	ACTGG	4 cut(s)	1549, 1734, 2138, 2320
BseRI	GAGGAG	2 cut(s)	260, 1460
BseSI	GKGCMC	1 cut(s)	1083
BseXI	GCAGC	6 cut(s)	21, 304, 598, 910, 1750, 2083
BsgI	GTGCAG	1 cut(s)	311
Bsh1236I	CGCG	2 cut(s)	55, 258
BshFI	GGCC	2 cut(s)	25, 2136
BshVI	ATCGAT	1 cut(s)	273
BsiHKAI	GWGCWC	2 cut(s)	546, 1083
BsiHKCI	CYCGRG	2 cut(s)	603, 2121
BsiSI	CCGG	5 cut(s)	22, 604, 806, 2133, 2279
BslFI	GGGAC	3 cut(s)	609, 1559, 1897
BslI	CCNNNNNNNGG	5 cut(s)	431, 488, 610, 901, 1031
BsmFI	GGGAC	3 cut(s)	609, 1559, 1897
BsmI	GAATGC	1 cut(s)	414
BsnI	GGCC	2 cut(s)	25, 2136
BsoBI	CYCGRG	2 cut(s)	603, 2121
Bsp119I	TTCGAA	1 cut(s)	119
Bsp1286I	GDGCHC	2 cut(s)	546, 1083
Bsp1407I	TGTACA	2 cut(s)	332, 348
BspACI	CCGC	6 cut(s)	12, 258, 580, 1278, 1757, 2311
BspANI	GGCC	2 cut(s)	25, 2136
BspCNI	CTCAG	8 cut(s)	88, 113, 550, 687, 940, 972, 1342, 1702
BspDI	ATCGAT	1 cut(s)	273
BspFNI	CGCG	2 cut(s)	55, 258
BspLI	GGNNCC	4 cut(s)	369, 597, 1785, 2195
BspMI	ACCTGC	3 cut(s)	607, 672, 730
BspPI	GGATC	2 cut(s)	349, 1126
BspT104I	TTCGAA	1 cut(s)	119
BspTI	CTTAAG	1 cut(s)	442
BsrDI	GCAATG	1 cut(s)	1757
BsrFI	RCCGGY	2 cut(s)	2132, 2278
BsrGI	TGTACA	2 cut(s)	332, 348
BsrI	ACTGG	4 cut(s)	1549, 1734, 2138, 2320
BssAI	RCCGGY	2 cut(s)	2132, 2278
BssECI	CCNNGG	4 cut(s)	375, 408, 603, 1623
BssSI	CACGAG	1 cut(s)	395
BssT1I	CCWWGG	1 cut(s)	375
Bst2BI	CACGAG	1 cut(s)	395
Bst2UI	CCWGG	2 cut(s)	409, 1625
Bst6I	CTCTTC	5 cut(s)	1062, 1425, 1494, 1597, 2018
BstAFI	CTTAAG	1 cut(s)	442
BstAPI	GCANNNNNTGC	1 cut(s)	2096
BstAUI	TGTACA	2 cut(s)	332, 348
BstBAI	YACGTR	3 cut(s)	431, 644, 1256
BstBI	TTCGAA	1 cut(s)	119
BstENI	CCTNNNNNAGG	1 cut(s)	1029
BstFNI	CGCG	2 cut(s)	55, 258
BstH2I	RGCGCY	2 cut(s)	1200, 2147
BstHHI	GCGC	5 cut(s)	57, 258, 1199, 2146, 2345
BstMWI	GCNNNNNNNGC	7 cut(s)	292, 586, 1763, 1997, 2096, 2288, 2297
BstNI	CCWGG	2 cut(s)	409, 1625
BstNSI	RCATGY	4 cut(s)	299, 671, 1024, 1904
BstSCI	CCNGG	5 cut(s)	407, 602, 603, 804, 1623
BstSFI	CTRYAG	1 cut(s)	2283
BstSLI	GKGCMC	1 cut(s)	1083
BstUI	CGCG	2 cut(s)	55, 258
BstV1I	GCAGC	6 cut(s)	21, 304, 598, 910, 1750, 2083
BstV2I	GAAGAC	2 cut(s)	793, 1164
BstX2I	RGATCY	2 cut(s)	341, 391
BstYI	RGATCY	2 cut(s)	341, 391
Bsu15I	ATCGAT	1 cut(s)	273
BsuI	GTATCC	2 cut(s)	706, 1918
BsuRI	GGCC	2 cut(s)	25, 2136
BsuTUI	ATCGAT	1 cut(s)	273
BtgZI	GCGATG	1 cut(s)	36
BtsI	GCAGTG	2 cut(s)	1227, 2306
BtsIMutI	CAGTG	6 cut(s)	516, 555, 1227, 1988, 2145, 2306
BveI	ACCTGC	3 cut(s)	607, 672, 730
CaiI	CAGNNNCTG	1 cut(s)	1724
CfoI	GCGC	5 cut(s)	57, 258, 1199, 2146, 2345
Cfr10I	RCCGGY	2 cut(s)	2132, 2278
Cfr13I	GGNCC	3 cut(s)	596, 1550, 2135
Cfr9I	CCCGGG	1 cut(s)	603
ClaI	ATCGAT	1 cut(s)	273
CseI	GACGC	1 cut(s)	1547
CspCI	CAANNNNNGTGG	2 cut(s)	1161, 1196
CviAII	CATG	8 cut(s)	296, 668, 1021, 1076, 1294, 1337, 1901, 2038
DraI	TTTAAA	1 cut(s)	1968
DrdI	GACNNNNNNGTC	1 cut(s)	1557
DseDI	GACNNNNNNGTC	1 cut(s)	1557
Eam1104I	CTCTTC	5 cut(s)	1062, 1425, 1494, 1597, 2018
EarI	CTCTTC	5 cut(s)	1062, 1425, 1494, 1597, 2018
Eco130I	CCWWGG	1 cut(s)	375
Eco32I	GATATC	1 cut(s)	877
Eco47I	GGWCC	2 cut(s)	596, 1550
Eco47III	AGCGCT	1 cut(s)	1198
Eco57I	CTGAAG	3 cut(s)	845, 1518, 2199
Eco72I	CACGTG	1 cut(s)	1256
Eco88I	CYCGRG	2 cut(s)	603, 2121
EcoNI	CCTNNNNNAGG	1 cut(s)	1029
EcoO109I	RGGNCCY	1 cut(s)	596
EcoRI	GAATTC	2 cut(s)	1265, 1799
EcoRII	CCWGG	2 cut(s)	407, 1623
EcoRV	GATATC	1 cut(s)	877
EcoT14I	CCWWGG	1 cut(s)	375
EcoT22I	ATGCAT	2 cut(s)	52, 1902
ErhI	CCWWGG	1 cut(s)	375
FaeI	CATG	8 cut(s)	299, 671, 1024, 1079, 1297, 1340, 1904, 2041
FalI	AAGNNNNNCTT	2 cut(s)	747, 779
FaqI	GGGAC	3 cut(s)	609, 1559, 1897
FatI	CATG	8 cut(s)	295, 667, 1020, 1075, 1293, 1336, 1900, 2037
FauI	CCCGC	1 cut(s)	5
FauNDI	CATATG	2 cut(s)	1517, 1795
FbaI	TGATCA	4 cut(s)	1105, 1978, 2026, 2238
FblI	GTMKAC	1 cut(s)	1561
Fnu4HI	GCNGC	6 cut(s)	10, 293, 587, 924, 1764, 2097
Fsp4HI	GCNGC	6 cut(s)	10, 293, 587, 924, 1764, 2097
FspBI	CTAG	2 cut(s)	1262, 1583
GlaI	GCGC	5 cut(s)	56, 257, 1198, 2145, 2344
GluI	GCNGC	6 cut(s)	10, 293, 587, 924, 1764, 2097
GsuI	CTGGAG	3 cut(s)	719, 1566, 1874
HaeII	RGCGCY	2 cut(s)	1200, 2147
HaeIII	GGCC	2 cut(s)	25, 2136
HapII	CCGG	5 cut(s)	22, 604, 806, 2133, 2279
HgaI	GACGC	1 cut(s)	1547
HhaI	GCGC	5 cut(s)	57, 258, 1199, 2146, 2345
Hin1II	CATG	8 cut(s)	299, 671, 1024, 1079, 1297, 1340, 1904, 2041
Hin6I	GCGC	5 cut(s)	55, 256, 1197, 2144, 2343
HinP1I	GCGC	5 cut(s)	55, 256, 1197, 2144, 2343
HincII	GTYRAC	1 cut(s)	1018
HindII	GTYRAC	1 cut(s)	1018
HindIII	AAGCTT	4 cut(s)	129, 966, 1238, 1961
HpaII	CCGG	5 cut(s)	22, 604, 806, 2133, 2279
HphI	GGTGA	7 cut(s)	182, 1012, 1060, 1798, 1870, 2262, 2363
Hpy166II	GTNNAC	4 cut(s)	349, 1018, 1081, 1562
Hpy8I	GTNNAC	4 cut(s)	349, 1018, 1081, 1562
HpyAV	CCTTC	7 cut(s)	36, 50, 497, 680, 1348, 2035, 2182
HpyCH4IV	ACGT	3 cut(s)	430, 643, 1255
HpyF10VI	GCNNNNNNNGC	7 cut(s)	292, 586, 1763, 1997, 2096, 2288, 2297
HpySE526I	ACGT	3 cut(s)	430, 643, 1255
Hsp92II	CATG	8 cut(s)	299, 671, 1024, 1079, 1297, 1340, 1904, 2041
HspAI	GCGC	5 cut(s)	55, 256, 1197, 2144, 2343
KroI	GCCGGC	1 cut(s)	2278
KroNI	GCCGGC	1 cut(s)	2280
Ksp22I	TGATCA	4 cut(s)	1105, 1978, 2026, 2238
LmnI	GCTCC	7 cut(s)	269, 373, 549, 633, 736, 1204, 1447
Lsp1109I	GCAGC	6 cut(s)	21, 304, 598, 910, 1750, 2083
MaeI	CTAG	2 cut(s)	1262, 1583
MaeII	ACGT	3 cut(s)	430, 643, 1255
MaeIII	GTNAC	4 cut(s)	449, 1039, 1225, 1858
MfeI	CAATTG	1 cut(s)	748
MflI	RGATCY	2 cut(s)	341, 391
MhlI	GDGCHC	2 cut(s)	546, 1083
MlyI	GAGTC	8 cut(s)	57, 738, 1086, 1327, 1681, 1879, 2255, 2372
Mph1103I	ATGCAT	2 cut(s)	52, 1902
MroNI	GCCGGC	1 cut(s)	2278
MslI	CAYNNNNRTG	2 cut(s)	560, 2372
MspA1I	CMGCKG	1 cut(s)	12
MspCI	CTTAAG	1 cut(s)	442
MspI	CCGG	5 cut(s)	22, 604, 806, 2133, 2279
MspR9I	CCNGG	5 cut(s)	409, 604, 605, 806, 1625
MunI	CAATTG	1 cut(s)	748
Mva1269I	GAATGC	1 cut(s)	414
MvaI	CCWGG	2 cut(s)	409, 1625
MvnI	CGCG	2 cut(s)	55, 258
MwoI	GCNNNNNNNGC	7 cut(s)	292, 586, 1763, 1997, 2096, 2288, 2297
NaeI	GCCGGC	1 cut(s)	2280
NciI	CCSGG	3 cut(s)	604, 605, 806
NdeI	CATATG	2 cut(s)	1517, 1795
NgoMIV	GCCGGC	1 cut(s)	2278
NlaIII	CATG	8 cut(s)	299, 671, 1024, 1079, 1297, 1340, 1904, 2041
NlaIV	GGNNCC	4 cut(s)	369, 597, 1785, 2195
NmeAIII	GCCGAG	2 cut(s)	232, 2012
NmuCI	GTSAC	2 cut(s)	1225, 1858
NsiI	ATGCAT	2 cut(s)	52, 1902
NspI	RCATGY	4 cut(s)	299, 671, 1024, 1904
NspV	TTCGAA	1 cut(s)	119
PaeI	GCATGC	1 cut(s)	299
PctI	GAATGC	1 cut(s)	414
PdiI	GCCGGC	1 cut(s)	2280
PfeI	GAWTC	5 cut(s)	16, 421, 1493, 1633, 1844
PflFI	GACNNNGTC	1 cut(s)	518
PflMI	CCANNNNNTGG	1 cut(s)	901
PfoI	TCCNGGA	1 cut(s)	804
PkrI	GCNGC	6 cut(s)	11, 294, 588, 925, 1765, 2098
PleI	GAGTC	8 cut(s)	57, 737, 1086, 1327, 1681, 1879, 2255, 2371
PmaCI	CACGTG	1 cut(s)	1256
PmlI	CACGTG	1 cut(s)	1256
PpsI	GAGTC	8 cut(s)	57, 737, 1086, 1327, 1681, 1879, 2255, 2371
Ppu21I	YACGTR	3 cut(s)	431, 644, 1256
PpuMI	RGGWCCY	1 cut(s)	596
PshBI	ATTAAT	1 cut(s)	899
PsiI	TTATAA	1 cut(s)	1307
Psp5II	RGGWCCY	1 cut(s)	596
Psp6I	CCWGG	2 cut(s)	407, 1623
PspCI	CACGTG	1 cut(s)	1256
PspGI	CCWGG	2 cut(s)	407, 1623
PspN4I	GGNNCC	4 cut(s)	369, 597, 1785, 2195
PspPI	GGNCC	3 cut(s)	596, 1550, 2135
PspPPI	RGGWCCY	1 cut(s)	596
PsrI	GAACNNNNNNTAC	4 cut(s)	1719, 1751, 2306, 2338
PstNI	CAGNNNCTG	1 cut(s)	1724
PsuI	RGATCY	2 cut(s)	341, 391
PsyI	GACNNNGTC	1 cut(s)	518
RseI	CAYNNNNRTG	2 cut(s)	560, 2372
SatI	GCNGC	6 cut(s)	10, 293, 587, 924, 1764, 2097
Sau96I	GGNCC	3 cut(s)	596, 1550, 2135
ScaI	AGTACT	1 cut(s)	720
SchI	GAGTC	8 cut(s)	57, 738, 1086, 1327, 1681, 1879, 2255, 2372
ScrFI	CCNGG	5 cut(s)	409, 604, 605, 806, 1625
SduI	GDGCHC	2 cut(s)	546, 1083
SfcI	CTRYAG	1 cut(s)	2283
SfuI	TTCGAA	1 cut(s)	119
SinI	GGWCC	2 cut(s)	596, 1550
SmaI	CCCGGG	1 cut(s)	605
SmiMI	CAYNNNNRTG	2 cut(s)	560, 2372
SmlI	CTYRAG	4 cut(s)	87, 442, 459, 1205
SmoI	CTYRAG	4 cut(s)	87, 442, 459, 1205
SphI	GCATGC	1 cut(s)	299
SsiI	CCGC	6 cut(s)	12, 258, 580, 1278, 1757, 2311
SspMI	CTAG	2 cut(s)	1262, 1583
StyD4I	CCNGG	5 cut(s)	407, 602, 603, 804, 1623
StyI	CCWWGG	1 cut(s)	375
TaiI	ACGT	3 cut(s)	433, 646, 1258
TaqI	TCGA	9 cut(s)	66, 119, 126, 273, 693, 1090, 1095, 2184, 2264
TatI	WGTACW	5 cut(s)	332, 348, 718, 932, 1520
TfiI	GAWTC	5 cut(s)	16, 421, 1493, 1633, 1844
TscAI	CASTG	6 cut(s)	523, 562, 1234, 1988, 2145, 2313
TseFI	GTSAC	2 cut(s)	1225, 1858
TseI	GCWGC	6 cut(s)	9, 292, 586, 923, 1763, 2096
Tsp45I	GTSAC	2 cut(s)	1225, 1858
TspDTI	ATGAA	9 cut(s)	516, 578, 1041, 1337, 1443, 1662, 1812, 1859, 2054
TspMI	CCCGGG	1 cut(s)	603
TspRI	CASTG	6 cut(s)	523, 562, 1234, 1988, 2145, 2313
Tth111I	GACNNNGTC	1 cut(s)	518
Van91I	CCANNNNNTGG	1 cut(s)	901
Vha464I	CTTAAG	1 cut(s)	442
VneI	GTGCAC	1 cut(s)	1079
VpaK11BI	GGWCC	2 cut(s)	596, 1550
VspI	ATTAAT	1 cut(s)	899
XagI	CCTNNNNNAGG	1 cut(s)	1029
XapI	RAATTY	6 cut(s)	550, 1064, 1265, 1453, 1799, 1836
XceI	RCATGY	4 cut(s)	299, 671, 1024, 1904
XmaI	CCCGGG	1 cut(s)	603
XmiI	GTMKAC	1 cut(s)	1561
XspI	CTAG	2 cut(s)	1262, 1583
ZrmI	AGTACT	1 cut(s)	720
Zsp2I	ATGCAT	2 cut(s)	52, 1902

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.