Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0011815

Physical Location & Seq

Genomic Coordinates Forward (+)

6219639 .. 6226394

Gene Structure 6756 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g11410.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2382 bp

ATGATCTCCGACGGAGTTGAAGACGAAGAGAAGTACCTCGCCGCCGGAATCGCCGGCCTTCAACAGAATGCCTTCTACATGCATCGCGCTCTGGACTCGAACAATCTCAGAGACGCGCTCAAGTACTCGGCTCAGATGCTATCGGAGCTCCGGACCTCGAAGCTCTCGCCTCACAAGTACTACGAGCTCTATATGCGAGCTTTTGACGAATTGAGGAAATTGGAGATGTTCTTCAAGGAGGAGGCGCGGCGCGGTTGCTCTATTATTGATCTGTATGAGCTTGTGCAGCATGCTGGCAACATTTTGCCCAGATTATATCTACTATGTACAGTAGGATCTGTTTATATCAAATCTAAGGAAGCACCTGCTAAGGATGTCCTGAAAGATCTTGTGGAAATGTCACGTGGTATTCAGAATCCTGTACGTGGGCTCTTCTTAAGGAGCTACCTTTCTCAAGTCAGTAGGGATAAGTTGCCTGATATCGGGTCGGAGTATGAAGGGGATGCAGATACTGTCAGGGATGCTGTTGAGTTTGTTCTCCAAAATTTCACCGAGATGAACAAGCTTTGGGTGCGGATGCAACATCAGGGGTCTGCTAGGGAAAAGGAGAAGCGGGAGAAAGAAAGGAGCGAGCTGCGCGATCTTGTTGGTAAAAACCTGCATGTTCTCAGCCAGATAGAAGGTGTTGATCTGGATTTGTACAAAGAGACCGTGCTTCCCAGAGTCCTGGAGCAGATTGTCAATTGTAAAGACGAGCTTGCACAGTTTTATTTGATGGATTGCATAATTCAAGTCTTTCCTGATGAGTACCACTTGCAAACTCTTGATATTTTGTTGGGTGCTTGCCCCCAACTTCAGCCATCTGTTGATATCAAGACAGTGCTATCCCAGTTAATGGAAAGGCTTTCCAACTATGCTGCATCAAGCATAGAAGTGTTGCCTGAGTTTTTACAAGTAGAAGCTTTTTCTAGACTGAGCAATGCGATAGGAAAGGTGATTGAAGCACACGTTGACATGCCTGTAATTGGTGTTGTTACTTTGTACTCATCCCTTCTTAAGTTCACTCTGCATGTGCATCCGGATCGACTTGATTATGCTGATCAAGTGTTGGGGTCATTTGTTAAGAAGCTCTCAGGAAAAGGAAAAATTGAAGACAGCAGGGCAACAAAACAAGTTGTTGCACTTTTAAGTGCTCCTTTGGAGAAATATAATGATATTGTGACTGCTTTGAAGCTTACAAATTATCCCCGTGTCATGGAATTCCTTGATACTGGAACGAATAAAGTCATGGCAACTGTCATAATACAAAGCATTATGAAAAATACAACTCATATTTTAACTGCTGAGAAGGTCGAGGCATTGTTTGAATTAATAAAAGGACTTATCGTGGATTTGGATGGGACTCTTCATGATGAGGTTGATGAAGAGGATTTCAAAGAGGAGCAGAATTCTGTTGCAAGACTTATTCAAATGTTCCATAATGAAGATCCAGAAGAGATGTTTAAGATCATATGTACTGTGCGGAAGCACATCATGTCTGGAGGACCAAAGCGGCTACCCTTTACTGTCCCTCCCCTAGTCTTTTCTTCTCTAAAGTTGGTCAGGCAATTGCATGGAGGACATGAAGATAGAGAAAATCCTTTTGGAGAAGAAGCGTCCACTACACCAAAGAAAATTTTTCAGCTCTTGACTCAGACTATTGAGGCTCTTTTGAATGTGCCAGCTCCTGAGCTAGCATTACGGCTGTACTTGCAATGTGCTGAGGCTGCAAATGATTGTGATTTAGAACCTGTTGCGTACGAATTCTTCACCCAAGCTTATATTCTGTACGAAGAAGAAATTTCGGATTCGAAAGCACAGGTGACTGCAATTCATTTGATAATTGGGACCCTCCAGAGGATGCAAGTATTTGGTGTTGAGAACAGAGATACTTTAACTCACAAGGCCACAGGGTATTCAGCAAAGCTTTTGAAGAAGCCTGATCAGTGCCGAGCTGTTTATGCTTGCTCACATCTTTTCTGGGTTGACGATCAAGAGAACATGAAAGATGGGGAAAGGGTACTGATTTGCCTAAAGAGAGCTTTAAGGATTGCAAATGCTGCCCAGCAGCAGGCCAATGCAACACGTGGTAGCACGGGTTCAGCAACACTCTTTGTTGAAATACTGAACAAGTACCTTTATTTCTTTGAGAAGGGCAACCCACAGATAACTGTTGCTTCTGTACAAAGCCTGATTGAATTGATTACTACTGAAATGCAAAGTGACTCAACTCCAGCAGAACCAGCTACAAATGCATTCTTTGCCAGCACGATGCGGTACATTCAATTCCAAAAGCAGAAAGGCGGCGCAGTTGGTGAAAAATATGAGCAAATCAAGGTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005770 GO:0005771 GO:0006810 GO:0006886 GO:0008104 GO:0008150 GO:0008565 GO:0010008 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016192 GO:0016197 GO:0016482 GO:0030904 GO:0031090 GO:0031410 GO:0031982 GO:0032991 GO:0033036 GO:0034613 GO:0042147 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0070727 GO:0071702 GO:0071705 GO:0097708 GO:0098588 GO:0098796 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko04144 map04144

Pfam Domains

Protein Families

Vps35

Protein Analysis

794

Amino Acids

89.85

Weight (kDa)

5.48

Isoelectric Point (pI)

42.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Vps35	PF03635	13 - 750	2.1e-288	Vacuolar protein sorting-associated protein 35

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0011815)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17790 AT3G51310
fragaria_vesca	FvH4_1g11410
malus_domestica	MD02G1126400.v1.1 MD15G1242400.v1.1
prunus_persica	Prupe.7G171800_v2.0.a1 Prupe.7G171800_v2.0.a1
pyrus_communis	pycom02g09870 pycom15g21360
rosa_chinensis	RchiOBHm_Chr2g0098981
rosa_laevigata	RLG00000016838
rosa_multiflora	Rmu_sc0000577.1_g000009
rosa_roxburghii	Rroxscaffold_2G00143530
rosa_rugosa	Rorug02G0075400
rosa_samantha	Rh2AG124900 Rh2BG128100 Rh2CG129000 Rh2DG129200
rosa_wichuraiana	Rw2G009590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	373
Acc36I	ACCTGC	2 cut(s)	373, 666
AccB7I	CCANNNNNTGG	1 cut(s)	895
AccII	CGCG	5 cut(s)	87, 116, 247, 252, 639
AccIII	TCCGGA	2 cut(s)	150, 1078
AciI	CCGC	9 cut(s)	42, 247, 252, 574, 613, 1522, 1552, 2314, 2343
AclWI	GGATC	3 cut(s)	343, 1089, 1481
AcsI	RAATTY	6 cut(s)	544, 1259, 1447, 1674, 1802, 1839
AcuI	CTGAAG	1 cut(s)	839
AcvI	CACGTG	2 cut(s)	404, 2126
AfiI	CCNNNNNNNGG	7 cut(s)	425, 482, 895, 1025, 1255, 1896, 2110
AflII	CTTAAG	2 cut(s)	436, 1055
AflIII	ACRYGT	2 cut(s)	1006, 2123
AjnI	CCWGG	1 cut(s)	726
AjuI	GAANNNNNNNTTGG	4 cut(s)	1626, 1658, 1806, 1838
Alw21I	GWGCWC	3 cut(s)	150, 189, 1195
Alw26I	GTCTC	2 cut(s)	105, 701
AlwI	GGATC	3 cut(s)	343, 1089, 1481
AlwNI	CAGNNNCTG	2 cut(s)	512, 1727
Aor13HI	TCCGGA	2 cut(s)	150, 1078
AoxI	GGCC	3 cut(s)	55, 1944, 2112
ApeKI	GCWGC	6 cut(s)	286, 634, 917, 1766, 2099, 2107
ApoI	RAATTY	6 cut(s)	544, 1259, 1447, 1674, 1802, 1839
AseI	ATTAAT	1 cut(s)	1370
Asp700I	GAANNNNTTC	1 cut(s)	71
AspLEI	GCGC	6 cut(s)	89, 118, 247, 252, 639, 2348
AspS9I	GGNCC	3 cut(s)	153, 1544, 1887
AsuHPI	GGTGA	5 cut(s)	541, 1006, 1801, 1873, 2366
AsuII	TTCGAA	1 cut(s)	1850
AsuNHI	GCTAGC	1 cut(s)	1732
AvaII	GGWCC	3 cut(s)	153, 1544, 1887
BanII	GRGCYC	3 cut(s)	150, 189, 432
BarI	GAAGNNNNNNTAC	2 cut(s)	1790, 1822
BbrPI	CACGTG	2 cut(s)	404, 2126
BbsI	GAAGAC	2 cut(s)	27, 1158
Bbv12I	GWGCWC	3 cut(s)	150, 189, 1195
BbvCI	CCTCAGC	1 cut(s)	1761
BbvI	GCAGC	6 cut(s)	298, 621, 904, 1753, 2086, 2119
BccI	CCATC	4 cut(s)	769, 868, 1391, 2042
BceAI	ACGGC	1 cut(s)	1757
BcgI	CGANNNNNNTGC	2 cut(s)	1064, 1098
BciT130I	CCWGG	1 cut(s)	728
BclI	TGATCA	2 cut(s)	1099, 1981
BcoDI	GTCTC	2 cut(s)	105, 701
BfaI	CTAG	4 cut(s)	597, 969, 1577, 1733
BfrI	CTTAAG	2 cut(s)	436, 1055
BfuAI	ACCTGC	2 cut(s)	373, 666
BglII	AGATCT	1 cut(s)	385
BmcAI	AGTACT	2 cut(s)	125, 179
Bme1390I	CCNGG	1 cut(s)	728
Bme18I	GGWCC	3 cut(s)	153, 1544, 1887
BmgT120I	GGNCC	3 cut(s)	153, 1544, 1887
BmiI	GGNNCC	2 cut(s)	1888, 1889
BmrFI	CCNGG	1 cut(s)	728
BmrI	ACTGGG	1 cut(s)	883
BmsI	GCATC	9 cut(s)	91, 126, 493, 511, 567, 929, 1084, 1890, 2301
BmtI	GCTAGC	1 cut(s)	1736
BmuI	ACTGGG	1 cut(s)	883
BpiI	GAAGAC	2 cut(s)	27, 1158
BplI	GAGNNNNNCTC	2 cut(s)	102, 134
BpmI	CTGGAG	4 cut(s)	749, 1560, 1877, 2256
Bpu10I	CCTNAGC	3 cut(s)	369, 1728, 1761
Bpu14I	TTCGAA	1 cut(s)	1850
BpuEI	CTTGAG	2 cut(s)	104, 438
BsaAI	YACGTR	3 cut(s)	404, 425, 2126
BsaI	GGTCTC	1 cut(s)	701
BsaWI	WCCGGW	2 cut(s)	150, 1078
BsaXI	ACNNNNNCTCC	2 cut(s)	1555, 1585
Bsc4I	CCNNNNNNNGG	7 cut(s)	425, 482, 895, 1025, 1255, 1896, 2110
Bse118I	RCCGGY	1 cut(s)	53
Bse1I	ACTGG	2 cut(s)	889, 1276
Bse3DI	GCAATG	2 cut(s)	985, 1760
BseAI	TCCGGA	2 cut(s)	150, 1078
BseBI	CCWGG	1 cut(s)	728
BseGI	GGATG	8 cut(s)	379, 508, 526, 582, 1046, 1075, 1402, 1905
BseLI	CCNNNNNNNGG	7 cut(s)	425, 482, 895, 1025, 1255, 1896, 2110
BseMI	GCAATG	2 cut(s)	985, 1760
BseNI	ACTGG	2 cut(s)	889, 1276
BseRI	GAGGAG	2 cut(s)	254, 1454
BseXI	GCAGC	6 cut(s)	298, 621, 904, 1753, 2086, 2119
BseYI	CCCAGC	1 cut(s)	2103
BsgI	GTGCAG	1 cut(s)	305
Bsh1236I	CGCG	5 cut(s)	87, 116, 247, 252, 639
BshFI	GGCC	3 cut(s)	57, 1946, 2114
BsiHKAI	GWGCWC	3 cut(s)	150, 189, 1195
BsiSI	CCGG	4 cut(s)	45, 54, 151, 1079
BsiWI	CGTACG	1 cut(s)	1797
BslFI	GGGAC	3 cut(s)	1414, 1553, 1900
BslI	CCNNNNNNNGG	7 cut(s)	425, 482, 895, 1025, 1255, 1896, 2110
BsmAI	GTCTC	2 cut(s)	105, 701
BsmBI	CGTCTC	1 cut(s)	105
BsmFI	GGGAC	3 cut(s)	1414, 1553, 1900
BsmI	GAATGC	2 cut(s)	73, 2294
BsnI	GGCC	3 cut(s)	57, 1946, 2114
Bso31I	GGTCTC	1 cut(s)	701
Bsp119I	TTCGAA	1 cut(s)	1850
Bsp1286I	GDGCHC	4 cut(s)	150, 189, 432, 1195
Bsp13I	TCCGGA	2 cut(s)	150, 1078
Bsp1407I	TGTACA	3 cut(s)	326, 699, 2221
BspACI	CCGC	9 cut(s)	42, 247, 252, 574, 613, 1522, 1552, 2314, 2343
BspANI	GGCC	3 cut(s)	57, 1946, 2114
BspEI	TCCGGA	2 cut(s)	150, 1078
BspFNI	CGCG	5 cut(s)	87, 116, 247, 252, 639
BspHI	TCATGA	1 cut(s)	1408
BspLI	GGNNCC	2 cut(s)	1888, 1889
BspMI	ACCTGC	2 cut(s)	373, 666
BspOI	GCTAGC	1 cut(s)	1736
BspPI	GGATC	3 cut(s)	343, 1089, 1481
BspQI	GCTCTTC	1 cut(s)	437
BspT104I	TTCGAA	1 cut(s)	1850
BspTI	CTTAAG	2 cut(s)	436, 1055
BspTNI	GGTCTC	1 cut(s)	701
BsrDI	GCAATG	2 cut(s)	985, 1760
BsrFI	RCCGGY	1 cut(s)	53
BsrGI	TGTACA	3 cut(s)	326, 699, 2221
BsrI	ACTGG	2 cut(s)	889, 1276
BssAI	RCCGGY	1 cut(s)	53
Bst2UI	CCWGG	1 cut(s)	728
Bst4CI	ACNGT	9 cut(s)	331, 514, 712, 765, 880, 1297, 1519, 1567, 2212
Bst6I	CTCTTC	5 cut(s)	21, 437, 1410, 1419, 1488
BstAFI	CTTAAG	2 cut(s)	436, 1055
BstAPI	GCANNNNNTGC	2 cut(s)	2099, 2300
BstAUI	TGTACA	3 cut(s)	326, 699, 2221
BstBAI	YACGTR	3 cut(s)	404, 425, 2126
BstBI	TTCGAA	1 cut(s)	1850
BstF5I	GGATG	8 cut(s)	379, 508, 526, 582, 1046, 1075, 1402, 1905
BstFNI	CGCG	5 cut(s)	87, 116, 247, 252, 639
BstHHI	GCGC	6 cut(s)	89, 118, 247, 252, 639, 2348
BstMAI	GTCTC	2 cut(s)	105, 701
BstNI	CCWGG	1 cut(s)	728
BstNSI	RCATGY	5 cut(s)	82, 293, 665, 1018, 1073
BstSCI	CCNGG	1 cut(s)	726
BstUI	CGCG	5 cut(s)	87, 116, 247, 252, 639
BstV1I	GCAGC	6 cut(s)	298, 621, 904, 1753, 2086, 2119
BstV2I	GAAGAC	2 cut(s)	27, 1158
BstX2I	RGATCY	3 cut(s)	335, 385, 1486
BstXI	CCANNNNNNTGG	1 cut(s)	727
BstYI	RGATCY	3 cut(s)	335, 385, 1486
BsuRI	GGCC	3 cut(s)	57, 1946, 2114
BtgZI	GCGATG	1 cut(s)	68
BtsCI	GGATG	8 cut(s)	379, 508, 526, 582, 1046, 1075, 1402, 1905
BtsIMutI	CAGTG	2 cut(s)	885, 1991
BveI	ACCTGC	2 cut(s)	373, 666
CaiI	CAGNNNCTG	2 cut(s)	512, 1727
CciI	TCATGA	1 cut(s)	1408
CfoI	GCGC	6 cut(s)	89, 118, 247, 252, 639, 2348
Cfr10I	RCCGGY	1 cut(s)	53
Cfr13I	GGNCC	3 cut(s)	153, 1544, 1887
CseI	GACGC	2 cut(s)	122, 1644
Eam1104I	CTCTTC	5 cut(s)	21, 437, 1410, 1419, 1488
EarI	CTCTTC	5 cut(s)	21, 437, 1410, 1419, 1488
Ecl136II	GAGCTC	2 cut(s)	148, 187
Eco24I	GRGCYC	3 cut(s)	150, 189, 432
Eco31I	GGTCTC	1 cut(s)	701
Eco32I	GATATC	2 cut(s)	481, 871
Eco47I	GGWCC	3 cut(s)	153, 1544, 1887
Eco53kI	GAGCTC	2 cut(s)	148, 187
Eco57I	CTGAAG	1 cut(s)	839
Eco72I	CACGTG	2 cut(s)	404, 2126
EcoICRI	GAGCTC	2 cut(s)	148, 187
EcoO109I	RGGNCCY	1 cut(s)	1887
EcoRI	GAATTC	3 cut(s)	1259, 1447, 1802
EcoRII	CCWGG	1 cut(s)	726
EcoRV	GATATC	2 cut(s)	481, 871
EcoT22I	ATGCAT	2 cut(s)	84, 2296
EcoT38I	GRGCYC	3 cut(s)	150, 189, 432
Esp3I	CGTCTC	1 cut(s)	105
FalI	AAGNNNNNCTT	4 cut(s)	741, 773, 1180, 1212
FaqI	GGGAC	3 cut(s)	1414, 1553, 1900
FauI	CCCGC	1 cut(s)	606
FauNDI	CATATG	1 cut(s)	1511
FbaI	TGATCA	2 cut(s)	1099, 1981
FokI	GGATG	8 cut(s)	386, 515, 533, 589, 1033, 1062, 1409, 1912
FriOI	GRGCYC	3 cut(s)	150, 189, 432
FspBI	CTAG	4 cut(s)	597, 969, 1577, 1733
GlaI	GCGC	6 cut(s)	88, 117, 246, 251, 638, 2347
GsaI	CCCAGC	1 cut(s)	2107
GsuI	CTGGAG	4 cut(s)	749, 1560, 1877, 2256
HaeIII	GGCC	3 cut(s)	57, 1946, 2114
HapII	CCGG	4 cut(s)	45, 54, 151, 1079
HgaI	GACGC	2 cut(s)	122, 1644
HhaI	GCGC	6 cut(s)	89, 118, 247, 252, 639, 2348
Hin6I	GCGC	6 cut(s)	87, 116, 245, 250, 637, 2346
HinP1I	GCGC	6 cut(s)	87, 116, 245, 250, 637, 2346
HincII	GTYRAC	2 cut(s)	1012, 2026
HindII	GTYRAC	2 cut(s)	1012, 2026
HindIII	AAGCTT	5 cut(s)	563, 960, 1232, 1815, 1964
HinfI	GANTC	8 cut(s)	48, 95, 415, 723, 1402, 1690, 1847, 2264
HpaII	CCGG	4 cut(s)	45, 54, 151, 1079
HphI	GGTGA	5 cut(s)	541, 1006, 1801, 1873, 2366
Hpy166II	GTNNAC	4 cut(s)	1012, 1062, 1659, 2026
Hpy188I	TCNGA	8 cut(s)	10, 110, 135, 145, 414, 490, 1695, 1846
Hpy8I	GTNNAC	4 cut(s)	1012, 1062, 1659, 2026
Hpy99I	CGWCG	1 cut(s)	14
HpyAV	CCTTC	7 cut(s)	68, 82, 491, 674, 1061, 1342, 2185
HpyCH4III	ACNGT	9 cut(s)	331, 514, 712, 765, 880, 1297, 1519, 1567, 2212
HpyCH4IV	ACGT	4 cut(s)	403, 424, 1008, 2125
HpySE526I	ACGT	4 cut(s)	403, 424, 1008, 2125
HspAI	GCGC	6 cut(s)	87, 116, 245, 250, 637, 2346
KflI	GGGWCCC	1 cut(s)	1887
Kpn2I	TCCGGA	2 cut(s)	150, 1078
KroI	GCCGGC	1 cut(s)	53
KroNI	GCCGGC	1 cut(s)	55
Ksp22I	TGATCA	2 cut(s)	1099, 1981
LguI	GCTCTTC	1 cut(s)	437
LmnI	GCTCC	8 cut(s)	145, 153, 441, 627, 730, 1198, 1441, 1729
Lsp1109I	GCAGC	6 cut(s)	298, 621, 904, 1753, 2086, 2119
LweI	GCATC	9 cut(s)	91, 126, 493, 511, 567, 929, 1084, 1890, 2301
MaeI	CTAG	4 cut(s)	597, 969, 1577, 1733
MaeII	ACGT	4 cut(s)	403, 424, 1008, 2125
MaeIII	GTNAC	5 cut(s)	399, 1033, 1219, 1861, 2261
MfeI	CAATTG	2 cut(s)	742, 1607
MflI	RGATCY	3 cut(s)	335, 385, 1486
MhlI	GDGCHC	4 cut(s)	150, 189, 432, 1195
MlyI	GAGTC	5 cut(s)	89, 732, 1396, 1684, 2258
MmeI	TCCRAC	3 cut(s)	33, 468, 933
Mph1103I	ATGCAT	2 cut(s)	84, 2296
MroI	TCCGGA	2 cut(s)	150, 1078
MroNI	GCCGGC	1 cut(s)	53
MroXI	GAANNNNTTC	1 cut(s)	71
MslI	CAYNNNNRTG	2 cut(s)	554, 932
MspCI	CTTAAG	2 cut(s)	436, 1055
MspI	CCGG	4 cut(s)	45, 54, 151, 1079
MspR9I	CCNGG	1 cut(s)	728
MteI	GCGCNGCGC	1 cut(s)	248
MunI	CAATTG	2 cut(s)	742, 1607
Mva1269I	GAATGC	2 cut(s)	73, 2294
MvaI	CCWGG	1 cut(s)	728
MvnI	CGCG	5 cut(s)	87, 116, 247, 252, 639
NaeI	GCCGGC	1 cut(s)	55
NdeI	CATATG	1 cut(s)	1511
NgoMIV	GCCGGC	1 cut(s)	53
NheI	GCTAGC	1 cut(s)	1732
NlaIV	GGNNCC	2 cut(s)	1888, 1889
NmeAIII	GCCGAG	2 cut(s)	107, 2015
NmuCI	GTSAC	4 cut(s)	399, 1219, 1861, 2261
NsiI	ATGCAT	2 cut(s)	84, 2296
NspI	RCATGY	5 cut(s)	82, 293, 665, 1018, 1073
NspV	TTCGAA	1 cut(s)	1850
PaeI	GCATGC	1 cut(s)	293
PagI	TCATGA	1 cut(s)	1408
PaqCI	CACCTGC	1 cut(s)	373
PciSI	GCTCTTC	1 cut(s)	437
PctI	GAATGC	2 cut(s)	73, 2294
PdiI	GCCGGC	1 cut(s)	55
PdmI	GAANNNNTTC	1 cut(s)	71
PfeI	GAWTC	3 cut(s)	48, 415, 1847
Pfl23II	CGTACG	1 cut(s)	1797
PflMI	CCANNNNNTGG	1 cut(s)	895
PfoI	TCCNGGA	1 cut(s)	726
PleI	GAGTC	5 cut(s)	89, 731, 1396, 1684, 2258
PmaCI	CACGTG	2 cut(s)	404, 2126
PmlI	CACGTG	2 cut(s)	404, 2126
PpsI	GAGTC	5 cut(s)	89, 731, 1396, 1684, 2258
Ppu21I	YACGTR	3 cut(s)	404, 425, 2126
PpuMI	RGGWCCY	1 cut(s)	1887
PshBI	ATTAAT	1 cut(s)	1370
Psp124BI	GAGCTC	2 cut(s)	150, 189
Psp5II	RGGWCCY	1 cut(s)	1887
Psp6I	CCWGG	1 cut(s)	726
PspCI	CACGTG	2 cut(s)	404, 2126
PspFI	CCCAGC	1 cut(s)	2103
PspGI	CCWGG	1 cut(s)	726
PspLI	CGTACG	1 cut(s)	1797
PspN4I	GGNNCC	2 cut(s)	1888, 1889
PspPI	GGNCC	3 cut(s)	153, 1544, 1887
PspPPI	RGGWCCY	1 cut(s)	1887
PsrI	GAACNNNNNNTAC	2 cut(s)	2122, 2154
PstNI	CAGNNNCTG	2 cut(s)	512, 1727
PsuI	RGATCY	3 cut(s)	335, 385, 1486
RseI	CAYNNNNRTG	2 cut(s)	554, 932
SacI	GAGCTC	2 cut(s)	150, 189
SapI	GCTCTTC	1 cut(s)	437
Sau96I	GGNCC	3 cut(s)	153, 1544, 1887
ScaI	AGTACT	2 cut(s)	125, 179
SchI	GAGTC	5 cut(s)	89, 732, 1396, 1684, 2258
ScrFI	CCNGG	1 cut(s)	728
SduI	GDGCHC	4 cut(s)	150, 189, 432, 1195
SfaNI	GCATC	9 cut(s)	91, 126, 493, 511, 567, 929, 1084, 1890, 2301
SfuI	TTCGAA	1 cut(s)	1850
SinI	GGWCC	3 cut(s)	153, 1544, 1887
SmiMI	CAYNNNNRTG	2 cut(s)	554, 932
SmlI	CTYRAG	4 cut(s)	119, 436, 453, 1055
SmoI	CTYRAG	4 cut(s)	119, 436, 453, 1055
SphI	GCATGC	1 cut(s)	293
SsiI	CCGC	9 cut(s)	42, 247, 252, 574, 613, 1522, 1552, 2314, 2343
SspMI	CTAG	4 cut(s)	597, 969, 1577, 1733
SstI	GAGCTC	2 cut(s)	150, 189
StyD4I	CCNGG	1 cut(s)	726
TaaI	ACNGT	9 cut(s)	331, 514, 712, 765, 880, 1297, 1519, 1567, 2212
TaiI	ACGT	4 cut(s)	406, 427, 1011, 2128
TaqI	TCGA	5 cut(s)	98, 158, 1084, 1353, 1850
TatI	WGTACW	8 cut(s)	123, 177, 326, 699, 1041, 1514, 1746, 2221
TauI	GCSGC	4 cut(s)	44, 250, 1555, 2346
TfiI	GAWTC	3 cut(s)	48, 415, 1847
TscAI	CASTG	2 cut(s)	885, 1991
TseFI	GTSAC	4 cut(s)	399, 1219, 1861, 2261
TseI	GCWGC	6 cut(s)	286, 634, 917, 1766, 2099, 2107
Tsp45I	GTSAC	4 cut(s)	399, 1219, 1861, 2261
TspDTI	ATGAA	9 cut(s)	510, 572, 1331, 1397, 1437, 1497, 1638, 1862, 2057
TspGWI	ACGGA	1 cut(s)	27
TspRI	CASTG	2 cut(s)	885, 1991
Van91I	CCANNNNNTGG	1 cut(s)	895
Vha464I	CTTAAG	2 cut(s)	436, 1055
VpaK11BI	GGWCC	3 cut(s)	153, 1544, 1887
VspI	ATTAAT	1 cut(s)	1370
XapI	RAATTY	6 cut(s)	544, 1259, 1447, 1674, 1802, 1839
XbaI	TCTAGA	1 cut(s)	968
XceI	RCATGY	5 cut(s)	82, 293, 665, 1018, 1073
XmnI	GAANNNNTTC	1 cut(s)	71
XspI	CTAG	4 cut(s)	597, 969, 1577, 1733
ZrmI	AGTACT	2 cut(s)	125, 179
Zsp2I	ATGCAT	2 cut(s)	84, 2296

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.