Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0011815

Physical Location & Seq

Genomic Coordinates Forward (+)

10925516 .. 10933467

Gene Structure 7952 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG129200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2082 bp

ATGTTATCTGTCAGATATCTTCTGTGTACAGTAGGATCTGTTTACATCAAATCTAAGGAAGCTCCTGCTAAGGATGTCCTGAAAGATCTTGTGGAAATGTCACGTGGCATTCAGAATCCTGTACGTGGGCTCTTTTTAAGGAGTTACCTTTCTCAAGTCAGTAGGGATAAGTTGCCTGATATTGGGTCGGAGTATGAAGGGGATGCGGATACTGTCAGGGATGCTGTTGAGTTTGTTCTCCAAAACTTCACTGAGATGAACAAGCTTTGGGTGCGGATGCAACATCAGGGGCCTGCTAGGGAAAAGGAGAAACGGGAGAAAGAAAGGAGCGAGCTACGTGATCTTGTTGGTAAAAACCTGCATGTTCTCAGTCAGATAGAAGGTGTTGATCTGGATTTGTACAAAGAGACCGTGCTTCCCAGAGTCCTGGAGCAGGTTGTCAATTGTAAAGATGAGCTGGCACAGTTTTATTTGATGGATTGCATTATTCAAGTCTTTCCTGATGAGTACCACTTGCAAACTCTTGATATATTGTTGGGTGCTTGCCCCCAACTTCAGCCATCTGTTGATATCAAGACAGTGCTATCCCAGTTAATGGAAAGGCTTTCCAACTATGCTGCCTCAAGCATAGAAGTGTTGCCCGAGTTCTTACAAGTAGAAGCTTTTTCTAAACTGAGCAATGCGATTGGAAAGGTGATTGAAGCGCACGTTGACATGCCTGTAATTGGTGTTGTTACTTTGTACTCATCCCTTCTTAAATTTACTCTCCATGTGCATCCGGATCGACTTGATTATGCTGATCAAGTGTTGGGGTCATTTGTTAAGAAGCTCTCCGGAAAAGGAAAAATTGAAGACAGCAGGGCAACAAAACAAGTTGTTGCACTTTTAAGTGCTCCATTGGAGAAATATAATGATATTGTGACTGCTTTGAAGCTTACAAATTATCCCCGTGTCATGGAATTCCTTGATACTGGAACAAATAAAGTCATGGCAACTGTTATAATACAAAGCATTATGAAAAATACAACTCATATATTAACTGCTGAGAAGGTCGAGGCATTGTTTGAATTAATAAAAGGACTTATCGAGGATTTGGATGGGACTCTTCATGATGAGGTTGATGAAGATGATTTCAAGGAGGAGCAGAATTCTGTTGCGAGACTTATTCAAATGTTCCACAATGAAGATCCAGAAGAGATGTTTAAGATCATAGGTACTGTGCGGAAGCACATCATGTCTGGAGGACCAAAGCGCCTACCCTTTACTGTCCCTCCCCTAGTCTTTAATTCTCTAAAGTTGGTCAGACAATTGCAAGGAGGACATGAAGATAAAGAAAATCCTTTTGGAGAAGAAGCGTCAACTACACCAAAGAAAATTTTTCAGCTCTTGTCTCAGACTATTGAGGCTCTGTTGAATGTGCCAGCTCCTGAGCTAGCTTTACGGCTGTACTTGCAATGTGCTGAGGCTGCAAATGACTGTGATTTAGAACCTGTTGCGTACGAATTCTTCACCCAAGCATATATTCTCTATGAAGAAGAAATTTCAGATTCGAAAGCACAGGTGACTGCAATTCATTTGATAATTGGGACTCTCCAGAGGATGCATGTATTTGGTGTTGAGAACAGAGATACTTTAACTCACAAAGCCACAGGGTATTCGGCAAAGCTTTTAAAGAAGCCTGATCAGTGCCGAGCTGTCTATGCTTGCTCGCATCTTTTCTGGGTTGATGATCAGGAGAACATGAAGGATGGGGAAAGGGTACTGATTTGCCTAAAGAGAGCTTTAAGGATTGCAAACGCTGCCCAGCAGATGGCCAACGCAACCCGTGGTAGCACTGGTTCAGCGACACTCTTCGTTGAAATACTGAACAAGTACCTTTATTTCTTTGAGAAGGGCAACCCACAGATAACTGTTGCTTCTGTACAAAGCCTGATTGAATTGATTACTACTGAAATGCAAAGTGACTCAACCCCAGCAGAGTCGGCTACAAATGCATTCTTTGCCAGCACGATGCGGTACATTCAATTCCAGAAGCAGAAAGGTGGCGCAGTTGGTGAAAAATATGAGCAAATCAAGGTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005770 GO:0005771 GO:0006810 GO:0006886 GO:0008104 GO:0008150 GO:0008565 GO:0010008 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016192 GO:0016197 GO:0016482 GO:0030904 GO:0031090 GO:0031410 GO:0031982 GO:0032991 GO:0033036 GO:0034613 GO:0042147 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046907 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0070727 GO:0071702 GO:0071705 GO:0097708 GO:0098588 GO:0098796 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko04144 map04144

Pfam Domains

Protein Families

Vps35

Protein Analysis

693

Amino Acids

78.12

Weight (kDa)

5.41

Isoelectric Point (pI)

40.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Vps35	PF03635	6 - 650	4.9e-244	Vacuolar protein sorting-associated protein 35

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011815)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17790 AT3G51310
fragaria_vesca	FvH4_1g11410
malus_domestica	MD02G1126400.v1.1 MD15G1242400.v1.1
prunus_persica	Prupe.7G171800_v2.0.a1 Prupe.7G171800_v2.0.a1
pyrus_communis	pycom02g09870 pycom15g21360
rosa_chinensis	RchiOBHm_Chr2g0098981
rosa_laevigata	RLG00000016838
rosa_multiflora	Rmu_sc0000577.1_g000009
rosa_roxburghii	Rroxscaffold_2G00143530
rosa_rugosa	Rorug02G0075400
rosa_samantha	Rh2AG124900 Rh2BG128100 Rh2CG129000 Rh2DG129200
rosa_wichuraiana	Rw2G009590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1001
Acc36I	ACCTGC	2 cut(s)	366, 424
AccB7I	CCANNNNNTGG	2 cut(s)	595, 1810
AccIII	TCCGGA	2 cut(s)	778, 833
AciI	CCGC	4 cut(s)	206, 274, 1222, 2014
AclWI	GGATC	3 cut(s)	43, 789, 1181
AcoI	YGGCCR	1 cut(s)	1812
AcsI	RAATTY	6 cut(s)	758, 959, 1147, 1374, 1502, 1539
AcuI	CTGAAG	1 cut(s)	539
AcvI	CACGTG	1 cut(s)	104
AfiI	CCNNNNNNNGG	7 cut(s)	125, 182, 433, 595, 725, 955, 1810
AjnI	CCWGG	1 cut(s)	426
AjuI	GAANNNNNNNTTGG	4 cut(s)	1326, 1358, 1506, 1538
Alw21I	GWGCWC	1 cut(s)	895
Alw26I	GTCTC	3 cut(s)	401, 1153, 1395
AlwI	GGATC	3 cut(s)	43, 789, 1181
AlwNI	CAGNNNCTG	1 cut(s)	1427
Ama87I	CYCGRG	1 cut(s)	641
Aor13HI	TCCGGA	2 cut(s)	778, 833
AoxI	GGCC	2 cut(s)	290, 1812
ApeKI	GCWGC	3 cut(s)	617, 1466, 1799
ApoI	RAATTY	6 cut(s)	758, 959, 1147, 1374, 1502, 1539
AseI	ATTAAT	1 cut(s)	1070
AspLEI	GCGC	3 cut(s)	706, 1254, 2048
AspS9I	GGNCC	2 cut(s)	290, 1244
AsuHPI	GGTGA	4 cut(s)	706, 1501, 1573, 2066
AsuII	TTCGAA	1 cut(s)	1550
AsuNHI	GCTAGC	1 cut(s)	1432
AvaI	CYCGRG	1 cut(s)	641
AvaII	GGWCC	1 cut(s)	1244
BalI	TGGCCA	1 cut(s)	1814
BanII	GRGCYC	1 cut(s)	132
BarI	GAAGNNNNNNTAC	2 cut(s)	1490, 1522
BbrPI	CACGTG	1 cut(s)	104
BbsI	GAAGAC	1 cut(s)	858
Bbv12I	GWGCWC	1 cut(s)	895
BbvCI	CCTCAGC	1 cut(s)	1461
BbvI	GCAGC	3 cut(s)	604, 1453, 1786
BccI	CCATC	5 cut(s)	469, 568, 1091, 1742, 1804
BceAI	ACGGC	1 cut(s)	1457
BcgI	CGANNNNNNTGC	2 cut(s)	764, 798
BciT130I	CCWGG	1 cut(s)	428
BciVI	GTATCC	1 cut(s)	202
BclI	TGATCA	3 cut(s)	799, 1681, 1729
BcoDI	GTCTC	3 cut(s)	401, 1153, 1395
BfaI	CTAG	3 cut(s)	297, 1277, 1433
BfoI	RGCGCY	1 cut(s)	1255
BfuAI	ACCTGC	2 cut(s)	366, 424
BfuI	GTATCC	1 cut(s)	202
BglII	AGATCT	1 cut(s)	85
BisI	GCNGC	3 cut(s)	618, 1467, 1800
BlsI	GCNGC	3 cut(s)	619, 1468, 1801
Bme1390I	CCNGG	1 cut(s)	428
Bme18I	GGWCC	1 cut(s)	1244
BmeT110I	CYCGRG	1 cut(s)	641
BmgT120I	GGNCC	2 cut(s)	290, 1244
BmiI	GGNNCC	1 cut(s)	291
BmrFI	CCNGG	1 cut(s)	428
BmrI	ACTGGG	1 cut(s)	583
BmsI	GCATC	7 cut(s)	193, 211, 267, 784, 1590, 1720, 2001
BmtI	GCTAGC	1 cut(s)	1436
BmuI	ACTGGG	1 cut(s)	583
BpiI	GAAGAC	1 cut(s)	858
BpmI	CTGGAG	3 cut(s)	449, 1260, 1577
Bpu10I	CCTNAGC	3 cut(s)	69, 1428, 1461
Bpu14I	TTCGAA	1 cut(s)	1550
BpuEI	CTTGAG	2 cut(s)	138, 607
BsaAI	YACGTR	3 cut(s)	104, 125, 338
BsaI	GGTCTC	1 cut(s)	401
BsaJI	CCNNGG	1 cut(s)	1825
BsaWI	WCCGGW	2 cut(s)	778, 833
BsaXI	ACNNNNNCTCC	2 cut(s)	1255, 1285
Bsc4I	CCNNNNNNNGG	7 cut(s)	125, 182, 433, 595, 725, 955, 1810
Bse1I	ACTGG	3 cut(s)	589, 976, 1840
Bse3DI	GCAATG	2 cut(s)	685, 1460
BseAI	TCCGGA	2 cut(s)	778, 833
BseBI	CCWGG	1 cut(s)	428
BseDI	CCNNGG	1 cut(s)	1825
BseGI	GGATG	9 cut(s)	79, 208, 226, 282, 746, 775, 1102, 1605, 1753
BseLI	CCNNNNNNNGG	7 cut(s)	125, 182, 433, 595, 725, 955, 1810
BseMI	GCAATG	2 cut(s)	685, 1460
BseMII	CTCAG	7 cut(s)	243, 382, 665, 1035, 1406, 1419, 1452
BseNI	ACTGG	3 cut(s)	589, 976, 1840
BseRI	GAGGAG	1 cut(s)	1154
BseXI	GCAGC	3 cut(s)	604, 1453, 1786
BseYI	CCCAGC	2 cut(s)	1803, 1972
BshFI	GGCC	2 cut(s)	292, 1814
BsiHKAI	GWGCWC	1 cut(s)	895
BsiHKCI	CYCGRG	1 cut(s)	641
BsiSI	CCGG	2 cut(s)	779, 834
BsiWI	CGTACG	1 cut(s)	1497
BslFI	GGGAC	3 cut(s)	1114, 1253, 1600
BslI	CCNNNNNNNGG	7 cut(s)	125, 182, 433, 595, 725, 955, 1810
BsmAI	GTCTC	3 cut(s)	401, 1153, 1395
BsmFI	GGGAC	3 cut(s)	1114, 1253, 1600
BsmI	GAATGC	2 cut(s)	108, 1994
BsnI	GGCC	2 cut(s)	292, 1814
Bso31I	GGTCTC	1 cut(s)	401
BsoBI	CYCGRG	1 cut(s)	641
Bsp119I	TTCGAA	1 cut(s)	1550
Bsp1286I	GDGCHC	2 cut(s)	132, 895
Bsp13I	TCCGGA	2 cut(s)	778, 833
Bsp1407I	TGTACA	3 cut(s)	26, 399, 1921
BspACI	CCGC	4 cut(s)	206, 274, 1222, 2014
BspANI	GGCC	2 cut(s)	292, 1814
BspCNI	CTCAG	7 cut(s)	244, 381, 666, 1036, 1405, 1420, 1453
BspEI	TCCGGA	2 cut(s)	778, 833
BspHI	TCATGA	1 cut(s)	1108
BspLI	GGNNCC	1 cut(s)	291
BspMI	ACCTGC	2 cut(s)	366, 424
BspOI	GCTAGC	1 cut(s)	1436
BspPI	GGATC	3 cut(s)	43, 789, 1181
BspT104I	TTCGAA	1 cut(s)	1550
BspTNI	GGTCTC	1 cut(s)	401
BsrDI	GCAATG	2 cut(s)	685, 1460
BsrGI	TGTACA	3 cut(s)	26, 399, 1921
BsrI	ACTGG	3 cut(s)	589, 976, 1840
BssECI	CCNNGG	1 cut(s)	1825
Bst2UI	CCWGG	1 cut(s)	428
Bst6I	CTCTTC	3 cut(s)	1110, 1188, 1856
BstAPI	GCANNNNNTGC	2 cut(s)	1799, 2000
BstAUI	TGTACA	3 cut(s)	26, 399, 1921
BstBAI	YACGTR	3 cut(s)	104, 125, 338
BstBI	TTCGAA	1 cut(s)	1550
BstC8I	GCNNGC	9 cut(s)	294, 332, 459, 544, 1422, 1434, 1705, 1709, 2005
BstDEI	CTNAG	9 cut(s)	54, 69, 252, 368, 674, 1044, 1392, 1428, 1461
BstDSI	CCRYGG	1 cut(s)	1825
BstENI	CCTNNNNNAGG	1 cut(s)	431
BstF5I	GGATG	9 cut(s)	79, 208, 226, 282, 746, 775, 1102, 1605, 1753
BstH2I	RGCGCY	1 cut(s)	1255
BstHHI	GCGC	3 cut(s)	706, 1254, 2048
BstMAI	GTCTC	3 cut(s)	401, 1153, 1395
BstMWI	GCNNNNNNNGC	8 cut(s)	271, 1450, 1466, 1700, 1799, 1982, 1991, 2000
BstNI	CCWGG	1 cut(s)	428
BstNSI	RCATGY	3 cut(s)	365, 718, 1607
BstSCI	CCNGG	1 cut(s)	426
BstV1I	GCAGC	3 cut(s)	604, 1453, 1786
BstV2I	GAAGAC	1 cut(s)	858
BstX2I	RGATCY	3 cut(s)	35, 85, 1186
BstXI	CCANNNNNNTGG	1 cut(s)	427
BstYI	RGATCY	3 cut(s)	35, 85, 1186
BsuI	GTATCC	1 cut(s)	202
BsuRI	GGCC	2 cut(s)	292, 1814
BtgI	CCRYGG	1 cut(s)	1825
BtsCI	GGATG	9 cut(s)	79, 208, 226, 282, 746, 775, 1102, 1605, 1753
BtsIMutI	CAGTG	4 cut(s)	249, 585, 1691, 1833
BveI	ACCTGC	2 cut(s)	366, 424
Cac8I	GCNNGC	9 cut(s)	294, 332, 459, 544, 1422, 1434, 1705, 1709, 2005
CaiI	CAGNNNCTG	1 cut(s)	1427
CciI	TCATGA	1 cut(s)	1108
CfoI	GCGC	3 cut(s)	706, 1254, 2048
Cfr13I	GGNCC	2 cut(s)	290, 1244
CseI	GACGC	1 cut(s)	1344
DdeI	CTNAG	9 cut(s)	54, 69, 252, 368, 674, 1044, 1392, 1428, 1461
DraI	TTTAAA	1 cut(s)	1671
EaeI	YGGCCR	1 cut(s)	1812
Eam1104I	CTCTTC	3 cut(s)	1110, 1188, 1856
EarI	CTCTTC	3 cut(s)	1110, 1188, 1856
Eco24I	GRGCYC	1 cut(s)	132
Eco31I	GGTCTC	1 cut(s)	401
Eco32I	GATATC	2 cut(s)	17, 571
Eco47I	GGWCC	1 cut(s)	1244
Eco57I	CTGAAG	1 cut(s)	539
Eco72I	CACGTG	1 cut(s)	104
Eco88I	CYCGRG	1 cut(s)	641
EcoNI	CCTNNNNNAGG	1 cut(s)	431
EcoO109I	RGGNCCY	1 cut(s)	290
EcoRI	GAATTC	3 cut(s)	959, 1147, 1502
EcoRII	CCWGG	1 cut(s)	426
EcoRV	GATATC	2 cut(s)	17, 571
EcoT22I	ATGCAT	2 cut(s)	1605, 1996
EcoT38I	GRGCYC	1 cut(s)	132
FaqI	GGGAC	3 cut(s)	1114, 1253, 1600
FbaI	TGATCA	3 cut(s)	799, 1681, 1729
Fnu4HI	GCNGC	3 cut(s)	618, 1467, 1800
FokI	GGATG	9 cut(s)	86, 215, 233, 289, 733, 762, 1109, 1612, 1760
FriOI	GRGCYC	1 cut(s)	132
Fsp4HI	GCNGC	3 cut(s)	618, 1467, 1800
FspBI	CTAG	3 cut(s)	297, 1277, 1433
GlaI	GCGC	3 cut(s)	705, 1253, 2047
GluI	GCNGC	3 cut(s)	618, 1467, 1800
GsaI	CCCAGC	2 cut(s)	1807, 1976
GsuI	CTGGAG	3 cut(s)	449, 1260, 1577
HaeII	RGCGCY	1 cut(s)	1255
HaeIII	GGCC	2 cut(s)	292, 1814
HapII	CCGG	2 cut(s)	779, 834
HgaI	GACGC	1 cut(s)	1344
HhaI	GCGC	3 cut(s)	706, 1254, 2048
Hin6I	GCGC	3 cut(s)	704, 1252, 2046
HinP1I	GCGC	3 cut(s)	704, 1252, 2046
HincII	GTYRAC	2 cut(s)	712, 1359
HindII	GTYRAC	2 cut(s)	712, 1359
HindIII	AAGCTT	4 cut(s)	263, 660, 932, 1664
HinfI	GANTC	7 cut(s)	115, 423, 1102, 1547, 1588, 1964, 1979
HpaII	CCGG	2 cut(s)	779, 834
HphI	GGTGA	4 cut(s)	706, 1501, 1573, 2066
Hpy166II	GTNNAC	4 cut(s)	27, 43, 712, 1359
Hpy188I	TCNGA	7 cut(s)	14, 114, 190, 375, 1304, 1395, 1546
Hpy8I	GTNNAC	4 cut(s)	27, 43, 712, 1359
HpyAV	CCTTC	6 cut(s)	191, 374, 761, 1042, 1738, 1885
HpyCH4IV	ACGT	4 cut(s)	103, 124, 337, 708
HpyF10VI	GCNNNNNNNGC	8 cut(s)	271, 1450, 1466, 1700, 1799, 1982, 1991, 2000
HpyF3I	CTNAG	9 cut(s)	54, 69, 252, 368, 674, 1044, 1392, 1428, 1461
HpySE526I	ACGT	4 cut(s)	103, 124, 337, 708
HspAI	GCGC	3 cut(s)	704, 1252, 2046
Kpn2I	TCCGGA	2 cut(s)	778, 833
Ksp22I	TGATCA	3 cut(s)	799, 1681, 1729
LmnI	GCTCC	6 cut(s)	67, 327, 430, 898, 1141, 1429
Lsp1109I	GCAGC	3 cut(s)	604, 1453, 1786
LweI	GCATC	7 cut(s)	193, 211, 267, 784, 1590, 1720, 2001
MaeI	CTAG	3 cut(s)	297, 1277, 1433
MaeII	ACGT	4 cut(s)	103, 124, 337, 708
MaeIII	GTNAC	6 cut(s)	99, 143, 733, 919, 1561, 1961
MfeI	CAATTG	2 cut(s)	442, 1307
MflI	RGATCY	3 cut(s)	35, 85, 1186
MhlI	GDGCHC	2 cut(s)	132, 895
MlsI	TGGCCA	1 cut(s)	1814
MluNI	TGGCCA	1 cut(s)	1814
MlyI	GAGTC	5 cut(s)	432, 1096, 1582, 1958, 1988
MmeI	TCCRAC	2 cut(s)	168, 633
Mox20I	TGGCCA	1 cut(s)	1814
Mph1103I	ATGCAT	2 cut(s)	1605, 1996
MroI	TCCGGA	2 cut(s)	778, 833
MscI	TGGCCA	1 cut(s)	1814
MslI	CAYNNNNRTG	2 cut(s)	254, 632
Msp20I	TGGCCA	1 cut(s)	1814
MspI	CCGG	2 cut(s)	779, 834
MspR9I	CCNGG	1 cut(s)	428
MunI	CAATTG	2 cut(s)	442, 1307
Mva1269I	GAATGC	2 cut(s)	108, 1994
MvaI	CCWGG	1 cut(s)	428
MwoI	GCNNNNNNNGC	8 cut(s)	271, 1450, 1466, 1700, 1799, 1982, 1991, 2000
NheI	GCTAGC	1 cut(s)	1432
NlaIV	GGNNCC	1 cut(s)	291
NmeAIII	GCCGAG	1 cut(s)	1715
NmuCI	GTSAC	4 cut(s)	99, 919, 1561, 1961
NsiI	ATGCAT	2 cut(s)	1605, 1996
NspI	RCATGY	3 cut(s)	365, 718, 1607
NspV	TTCGAA	1 cut(s)	1550
PagI	TCATGA	1 cut(s)	1108
PctI	GAATGC	2 cut(s)	108, 1994
PfeI	GAWTC	2 cut(s)	115, 1547
Pfl23II	CGTACG	1 cut(s)	1497
PflMI	CCANNNNNTGG	2 cut(s)	595, 1810
PfoI	TCCNGGA	1 cut(s)	426
PkrI	GCNGC	3 cut(s)	619, 1468, 1801
PleI	GAGTC	5 cut(s)	431, 1096, 1582, 1958, 1987
PmaCI	CACGTG	1 cut(s)	104
PmlI	CACGTG	1 cut(s)	104
PpsI	GAGTC	5 cut(s)	431, 1096, 1582, 1958, 1987
Ppu21I	YACGTR	3 cut(s)	104, 125, 338
PshBI	ATTAAT	1 cut(s)	1070
PsiI	TTATAA	1 cut(s)	1001
Psp6I	CCWGG	1 cut(s)	426
PspCI	CACGTG	1 cut(s)	104
PspFI	CCCAGC	2 cut(s)	1803, 1972
PspGI	CCWGG	1 cut(s)	426
PspLI	CGTACG	1 cut(s)	1497
PspN4I	GGNNCC	1 cut(s)	291
PspPI	GGNCC	2 cut(s)	290, 1244
PsrI	GAACNNNNNNTAC	2 cut(s)	1822, 1854
PstNI	CAGNNNCTG	1 cut(s)	1427
PsuI	RGATCY	3 cut(s)	35, 85, 1186
RseI	CAYNNNNRTG	2 cut(s)	254, 632
SatI	GCNGC	3 cut(s)	618, 1467, 1800
Sau96I	GGNCC	2 cut(s)	290, 1244
SchI	GAGTC	5 cut(s)	432, 1096, 1582, 1958, 1988
ScrFI	CCNGG	1 cut(s)	428
SduI	GDGCHC	2 cut(s)	132, 895
SfaNI	GCATC	7 cut(s)	193, 211, 267, 784, 1590, 1720, 2001
SfuI	TTCGAA	1 cut(s)	1550
SinI	GGWCC	1 cut(s)	1244
SmiMI	CAYNNNNRTG	2 cut(s)	254, 632
SmlI	CTYRAG	2 cut(s)	153, 622
SmoI	CTYRAG	2 cut(s)	153, 622
SsiI	CCGC	4 cut(s)	206, 274, 1222, 2014
SspMI	CTAG	3 cut(s)	297, 1277, 1433
StyD4I	CCNGG	1 cut(s)	426
TaiI	ACGT	4 cut(s)	106, 127, 340, 711
TaqI	TCGA	4 cut(s)	784, 1053, 1086, 1550
TatI	WGTACW	5 cut(s)	26, 399, 741, 1446, 1921
TfiI	GAWTC	2 cut(s)	115, 1547
TscAI	CASTG	4 cut(s)	256, 585, 1691, 1840
TseFI	GTSAC	4 cut(s)	99, 919, 1561, 1961
TseI	GCWGC	3 cut(s)	617, 1466, 1799
Tsp45I	GTSAC	4 cut(s)	99, 919, 1561, 1961
TspRI	CASTG	4 cut(s)	256, 585, 1691, 1840
Van91I	CCANNNNNTGG	2 cut(s)	595, 1810
VpaK11BI	GGWCC	1 cut(s)	1244
VspI	ATTAAT	1 cut(s)	1070
XagI	CCTNNNNNAGG	1 cut(s)	431
XapI	RAATTY	6 cut(s)	758, 959, 1147, 1374, 1502, 1539
XceI	RCATGY	3 cut(s)	365, 718, 1607
XspI	CTAG	3 cut(s)	297, 1277, 1433
Zsp2I	ATGCAT	2 cut(s)	1605, 1996

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.