Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0008205

Physical Location & Seq

Genomic Coordinates Forward (+)

19825267 .. 19831880

Gene Structure 6614 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G53480.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4353 bp

ATGGCTCATATGGTTGGAGCAGACGATATTGAGTCATTGAGAGTAGAGCTTGCAGAGATCGGAAGAAGCATCAGATCATCATTCCGGAGACATACTTCGAGTTTCAGAAGCAGCTCTTCAATATATGAAGTTGAAAATGATGGTGATGTTAATGATCATGATGCAGAGTATGCTCTGCAATGGGCTGAGATTGAGAGATTACCAACTGTCAAGCGAATGAGATCGACTCTCCTTGATGATGGCGATGAGTCCATGACCGAGAAAGGAAGAAGAGTCGTTGATGTCACAAAGCTTGGAGCCGTGGAACGTCATCTGATGATTGAGAAACTCATCAAACACATTGAGAATGATAATCTCAAGTTGCTCAAGAAAATCAGGAGAAGAATAGACAGAGTCGGGATGGAGTTACCGACCATAGAAGTGAGGTACGAGAGTTTAAAAGTGGTGGCCGAGTGCGAGGTTGTCGAAGGGAAGGCACTTCCAACACTGTGGAACACTGCTAAGCGTGTTTTATCTGAACTGGTGAAGCTCACTGGTGCAAAAACACATGAAGCCAAGATAAACATTATTAATGATGTTAATGGCATTATAAAGCCAGGAAGGTTAACACTGTTGCTTGGTCCTCCTAGCTGCGGAAAAACAACTTTGTTAAAGGCCTTGTCTGGAAATTTAGAAAACAATCTAAAGTGTTCAGGTGAAATATCTTACAATGGACACAGACTGGATGAGTTTGTTCCTCAGAAAACTTCAGCGTACATAAGTCAATATGATCTGCACATTGCAGAGATGACAGTGAGGGAGACAGTTGACTTCTCAGCTCGTTGTCAGGGCGTTGGTAGCCGAACAGATATTATGATGGAAGTTAGTAAAAGAGAAAAGGAAAAAGGAATCATTCCTGACACAGAAGTGGATGCTTACATGAAAGCAATTTCTGTTGAAGGACTCCAAAGAAGTCTGCAAACAGATTACATTTTGAAGATTCTCGGACTTGATATTTGTGCAGAAATATTGATTGGAGATGTGATGAGGAGAGGTATATCAGGAGGTCAAAAGAAGCGTCTTACCACAGCTGAGATGATCGTTGGCCCGACAAAGGCTCTGTTTATGGATGAAATAACAAATGGCCTAGACAGCTCCACAGCTTTTCAGATTGTCAAATCTCTTCAGCAGTTTGCTCACATATCAAGCGCTACTGTACTTGTTTCGCTTCTTCAACCCGCCCCAGAATCCTATGACCTCTTTGATGACATTATGCTGATGGCCAAAGGAAGAATCGTGTATCATGGTCCACGCGGTGAAGTCCTTAACTTCTTTGAGGATTGTGGATTCCGATGCCCTGAAAGGAAGGGTGTTGCAGACTTTCTCCAGGAGGTTATATCCAAAAAAGATCAAGCACAATACTGGTGGCACGAGGATTTACCTTACAGTTTTGTCTCGGTAGAAATGTTGTCGAAGAAGTTCAAGGACTTGAGTATTGGGAAAAAGATCGAAGACACTCTGTCAAAGCCATATGATAGATCCAAAAGCCATAAGGATGCTTTGTCCTTCAGTGTGTATTCTCTTCCAAACTGGGAGCTGTTCATAGCATGCATATCAAGAGAGTATCTTCTCATGAAGAGAAACTATTTCGTCTATATTTTCAAGACTGCTCAGCTTGTTATGGCCGCATTCATCACTATGACAGTGTTTATCCGAACACGGATGGGTATTGATATCATTCATGGAAATTCTTACATGAGTGCCCTCTTTTTCGCCCTCATTATACTTCTTGTTGACGGATTCCCAGAGTTGTCTATGACGGCTCAACGTCTAGCCGTGTTTTATAAGCAGAAGCAGTTGTGTTTCTATCCTGCATGGGCGTATGCAATCCCTGCAACAGTGTTAAAGGTCCCTCTCTCGTTCTTTGAATCTCTCGTTTGGACCTGCCTCTCATACTATGTCATTGGATACACCCCTGAAGCATCCAGGTTCTTCAAGCAGTTCATTCTACTCTTTGCTGTTCACTTCACCTCGATATCCATGTTCCGGTGTCTAGCTGCAATCTTCCAGACAGTAGTTGCTTCAATCACAGCTGGCAGTTTTGGTATATTATTCACATTTGTCTTTGCCGGTTTCGTCATTCCACCACCTTCTATGCCAGCATGGCTCAAGTGGGGTTTCTGGGCAAATCCTTTGAGTTACGGTGAGATTGGGTTATCAGTAAACGAGTTTCTTGCTCCAAGGTGGAATCAGATGCAACCCAATAATTTTACCTTAGGACGAACCATACTCCAAACCCGTGGAATGGACTACAACGGTTACATGTACTGGGTATCATTATGTGCCTTGTTGGGTTTCACTGTGCTCTTCAACATCATTTTCACTCTGGCTCTAACGTTCTTGAAATCACCCACATCATCTCGAGCCATGATTTCGCAAGACAAACTCTCTGAGCTGCAAGGAACAGAAAAGTCAACAGAAGATTCTTCTGTCAGGAAAAAGACCACAGACTCCCCTGTAAAGACCGAAGAAGAAGACAAAATGGTCTTACCATTCAAGCCTCTCACTGTAACATTTCAAGACTTGAACTATTTCGTTGACATGCCAGTGGAGATGAGAGACCAAGGATATGATCAGAAGAAACTACAACTTCTCTCAGATATCACAGGAGCTTTCCGTCCCGGAATCCTAACGGCACTAATGGGAGTGAGTGGAGCTGGAAAAACCACTCTTCTCGACGTTCTAGCCGGAAGGAAAACAAGCGGATACATCGAAGGAGACATTAGAATCAGTGGCTTCCCTAAAGTCCAAGAAACATTCGCTAGAGTCTCAGGCTACTGTGAACAAACAGATATTCACTCACCAAACATCACTGTAGAAGAATCCGTAATCTACTCGGCTTGGCTTCGTCTAGCTCCTGAGATCGATGCCACAACAAAAACCAAATTCGTGAAGCAAGTGCTTGAGACGATCGAATTAGATGAGATTAAAGATTCATTGGTGGGAGTCACCGGAGTTAGTGGATTATCGACGGAGCAAAGGAAGAGATTGACGATTGCGGTGGAGTTGGTGGCGAATCCGTCGATTATATTTATGGATGAGCCAACGACGGGGCTAGACGCAAGAGCAGCTGCCATTGTTATGAGAGCTGTGAAGAACGTCGCTGATACTGGACGAACCATCGTCTGTACTATTCATCAGCCTAGTATCGACATTTTTGAAGCCTTCGACGAGCTGGTGCTTCTTAAAAGAGGTGGTCGCATGATCTACACAGGACCATTAGGCCAACATTCACGTCACATTATCGAGTATTTTGAGAGTGTTCCTGAAATTCCTAAAATAAAAGACAACCACAATCCAGCAACATGGATGCTTGATGTTAGTTCACAGTCGGTAGAAATTGAACTTGGTGTCGATTTCGCAAAAATCTACCATGACTCTGCTCTTTACAAGCGAAACTCAGAGCTTGTGAAACAGTTGAGCCAGCCAGATTCAGGATCAAGTGATATACAGTTTAAGAGAACCTTTGCACAAAGCTGGTGGGGACAATTCAAATCTATTCTATGGAAAATGAACTTGTCTTATTGGAGAAGCCCTTCTTATAACCTAATGCGTATGATGCACACTTTAGTCTCTTCTTTGATCTTCGGCGCACTTTTCTGGAAACAAGGCCAAAATCTAGATACTCAACAGAGTATGTTCACAGTATTTGGAGCGATCTACGGTTTGGTACTCTTCTTAGGGATAAACAATTGTGCATCAGCTCTTCAATATTTCGAAACAGAGAGAAATGTTATGTACCGGGAAAGATTCGCAGGGATGTACTCAGCGACTGCTTATGCATTGGGTCAAGTGGTGACTGAGATACCTTATATATTCATACAAGCTGCCGAGTTTGTGATCGTAACATATCCAATGATCGGTTTCTATCCTTCAGCCTACAAAGTCTTTTGGTCACTCTACTCTATGTTTTGCTCACTACTCACTTTCAACTACCTTGCGATGTTCCTCGTCTCCATCACGCCAAACTTCATGGTTGCCGCGATTCTTCAATCGCTCTTTTATGTTGGTTTCAACCTTTTTTCGGGGTTTTTGATCCCCCAAACGCAAGTACCAGGGTGGTGGATTTGGTTATATTATCTAACACCAACGTCTTGGACACTCAACGGGTTTATCTCGTCCCAATACGGCGATATTCATGAAGAGATCAATGTCTTTGGACAATCCACGACGGTTGCAAGATTCTTGAAAGACTATTTTGGATTTCATCATGACCTTTTGGCGGTTACCGCGGTTGTTCAAATCGCTTTTCCCATTGCCTTAGCTTCTATGTTTGCATTCTTCGTGGGCAAACTCAACTTCCAACGAAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006810 GO:0006855 GO:0007275 GO:0008150 GO:0008643 GO:0009506 GO:0009719 GO:0009725 GO:0009733 GO:0009914 GO:0009926 GO:0009987 GO:0010033 GO:0010243 GO:0010817 GO:0014070 GO:0015399 GO:0015405 GO:0015893 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022622 GO:0022804 GO:0022857 GO:0030054 GO:0031224 GO:0032501 GO:0032502 GO:0032870 GO:0033231 GO:0042221 GO:0042493 GO:0042623 GO:0042626 GO:0043492 GO:0044425 GO:0044464 GO:0048364 GO:0048731 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055044 GO:0055085 GO:0060918 GO:0065007 GO:0065008 GO:0070887 GO:0071229 GO:0071310 GO:0071365 GO:0071366 GO:0071407 GO:0071417 GO:0071495 GO:0071702 GO:0071944 GO:0080026 GO:0099402 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane ABC_tran ABC_trans_N PDR_assoc

Protein Analysis

1450

Amino Acids

164.1

Weight (kDa)

6.81

Isoelectric Point (pI)

44.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	191 - 374	1.4e-16	ABC transporter
ABC2_membrane_7	PF19055	405 - 477	1.3e-06	ABC-2 type transporter
ABC2_membrane	PF01061	526 - 737	1.6e-41	ABC-2 type transporter
PDR_assoc	PF08370	742 - 804	2.1e-22	Plant PDR ABC transporter associated
ABC_tran	PF00005	878 - 1030	2e-20	ABC transporter
ABC2_membrane_7	PF19055	1059 - 1122	2e-06	ABC-2 type transporter
ABC2_membrane	PF01061	1176 - 1389	6.8e-55	ABC-2 type transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008205)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37280 AT2G37280 AT2G37280 AT2G37280 AT3G53480
fragaria_vesca	FvH4_6g08380 FvH4_6g08380 FvH4_6g08380
malus_domestica	MD04G1187600.v1.1
prunus_persica	Prupe.6G306100_v2.0.a1
pyrus_communis	pycom04g16590
rosa_chinensis	RchiOBHm_Chr3g0458321
rosa_laevigata	RLG00000025169
rosa_multiflora	Rmu_sc0007338.1_g000006
rosa_roxburghii	Rroxscaffold_6G00421170
rosa_rugosa	Rorug03G0025800 Rorug03G0025800 Rorug03G0025800
rosa_samantha	Rh3AG086600 Rh3BG089400 Rh3CG089800 Rh3DG090400
rosa_wichuraiana	Rw3G007350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	590, 1824, 3582
AasI	GACNNNNNNGTC	1 cut(s)	2522
Acc36I	ACCTGC	1 cut(s)	1931
AccII	CGCG	3 cut(s)	1293, 4022, 4271
AccIII	TCCGGA	1 cut(s)	84
AclI	AACGTT	1 cut(s)	2375
AclWI	GGATC	3 cut(s)	1512, 3484, 4069
AcoI	YGGCCR	3 cut(s)	447, 1260, 1662
AcsI	RAATTY	4 cut(s)	667, 1726, 2924, 3309
AcuI	CTGAAG	5 cut(s)	732, 1148, 1531, 1977, 3897
AdeI	CACNNNGTG	1 cut(s)	1295
AfaI	GTAC	9 cut(s)	428, 755, 1197, 2306, 3169, 3711, 3779, 3803, 4092
AfeI	AGCGCT	1 cut(s)	1189
AfiI	CCNNNNNNNGG	9 cut(s)	632, 1093, 2025, 2284, 3089, 3473, 3899, 4063, 4261
AflIII	ACRYGT	1 cut(s)	2301
AhdI	GACNNNNNGTC	1 cut(s)	1498
AjiI	CACGTC	1 cut(s)	3275
AjnI	CCWGG	4 cut(s)	595, 1365, 1964, 4093
AjuI	GAANNNNNNNTTGG	4 cut(s)	996, 1028, 3369, 3401
AleI	CACNNNNGTG	1 cut(s)	905
Alw21I	GWGCWC	1 cut(s)	2346
Alw26I	GTCTC	9 cut(s)	82, 794, 1438, 2592, 2751, 2812, 2939, 3616, 3997
AlwI	GGATC	3 cut(s)	1512, 3484, 4069
AlwNI	CAGNNNCTG	1 cut(s)	3812
Ama87I	CYCGRG	1 cut(s)	2400
Aor13HI	TCCGGA	1 cut(s)	84
Aor51HI	AGCGCT	1 cut(s)	1189
AoxI	GGCC	8 cut(s)	447, 654, 1084, 1123, 1260, 1662, 3262, 3649
ApeKI	GCWGC	7 cut(s)	111, 630, 2036, 2434, 3107, 3110, 3866
ApoI	RAATTY	4 cut(s)	667, 1726, 2924, 3309
ArsI	GACNNNNNNTTYG	4 cut(s)	978, 1010, 1042, 1074
AseI	ATTAAT	1 cut(s)	570
Asp700I	GAANNNNTTC	3 cut(s)	1457, 2570, 3574
AspLEI	GCGC	2 cut(s)	1190, 3632
AspS9I	GGNCC	6 cut(s)	620, 1085, 1286, 1888, 1920, 3254
AsuC2I	CCSGG	2 cut(s)	2661, 3782
AsuII	TTCGAA	1 cut(s)	3756
AvaI	CYCGRG	1 cut(s)	2400
AvaII	GGWCC	5 cut(s)	620, 1286, 1888, 1920, 3254
AxyI	CCTNAGG	1 cut(s)	2254
BaeGI	GKGCMC	1 cut(s)	1744
BaeI	ACNNNNGTAYC	4 cut(s)	418, 451, 4074, 4107
BalI	TGGCCA	1 cut(s)	1262
BauI	CACGAG	1 cut(s)	1409
BbsI	GAAGAC	2 cut(s)	1497, 2520
Bbv12I	GWGCWC	1 cut(s)	2346
BbvI	GCAGC	7 cut(s)	123, 617, 2023, 2421, 3097, 3119, 3853
BccI	CCATC	8 cut(s)	134, 233, 394, 850, 1252, 1696, 3167, 4004
BceAI	ACGGC	5 cut(s)	284, 1799, 1815, 2688, 4183
BcgI	CGANNNNNNTGC	2 cut(s)	2195, 2229
BciT130I	CCWGG	4 cut(s)	597, 1367, 1966, 4095
BciVI	GTATCC	2 cut(s)	1940, 2738
BclI	TGATCA	2 cut(s)	154, 2611
BcnI	CCSGG	2 cut(s)	2661, 3782
BcoDI	GTCTC	9 cut(s)	82, 794, 1438, 2592, 2751, 2812, 2939, 3616, 3997
BfmI	CTRYAG	1 cut(s)	2853
BfoI	RGCGCY	1 cut(s)	1191
BfuAI	ACCTGC	1 cut(s)	1931
BfuI	GTATCC	2 cut(s)	1940, 2738
BglI	GCCNNNNNGGC	1 cut(s)	2143
BisI	GCNGC	9 cut(s)	112, 631, 1665, 2037, 2435, 3108, 3111, 3867, 4020
BlpI	GCTNAGC	2 cut(s)	501, 1650
BlsI	GCNGC	9 cut(s)	113, 632, 1666, 2038, 2436, 3109, 3112, 3868, 4021
Bme1390I	CCNGG	6 cut(s)	597, 1367, 1966, 2661, 3782, 4095
Bme18I	GGWCC	5 cut(s)	620, 1286, 1888, 1920, 3254
BmeRI	GACNNNNNGTC	1 cut(s)	1498
BmeT110I	CYCGRG	1 cut(s)	2400
BmgBI	CACGTC	1 cut(s)	3275
BmgT120I	GGNCC	6 cut(s)	620, 1085, 1286, 1888, 1920, 3254
BmiI	GGNNCC	2 cut(s)	298, 1890
BmrFI	CCNGG	6 cut(s)	597, 1367, 1966, 2661, 3782, 4095
BmrI	ACTGGG	2 cut(s)	1579, 2317
BmuI	ACTGGG	2 cut(s)	1579, 2317
BpiI	GAAGAC	2 cut(s)	1497, 2520
BplI	GAGNNNNNCTC	2 cut(s)	211, 243
BpmI	CTGGAG	1 cut(s)	1349
Bpu10I	CCTNAGC	1 cut(s)	4300
Bpu1102I	GCTNAGC	2 cut(s)	501, 1650
Bpu14I	TTCGAA	1 cut(s)	3756
BpuEI	CTTGAG	5 cut(s)	341, 350, 1489, 2132, 2963
BpuMI	CCSGG	2 cut(s)	2661, 3782
Bsa29I	ATCGAT	1 cut(s)	2904
BsaI	GGTCTC	1 cut(s)	2592
BsaJI	CCNNGG	6 cut(s)	300, 2219, 2278, 2602, 4094, 4269
BsaWI	WCCGGW	3 cut(s)	84, 2025, 2990
Bsc4I	CCNNNNNNNGG	9 cut(s)	632, 1093, 2025, 2284, 3089, 3473, 3899, 4063, 4261
Bse118I	RCCGGY	1 cut(s)	2108
Bse1I	ACTGG	8 cut(s)	525, 538, 726, 1406, 1574, 2312, 2585, 3154
Bse21I	CCTNAGG	1 cut(s)	2254
Bse3DI	GCAATG	3 cut(s)	185, 777, 4293
BseAI	TCCGGA	1 cut(s)	84
BseBI	CCWGG	4 cut(s)	597, 1367, 1966, 4095
BseCI	ATCGAT	1 cut(s)	2904
BseDI	CCNNGG	6 cut(s)	300, 2219, 2278, 2602, 4094, 4269
BseLI	CCNNNNNNNGG	9 cut(s)	632, 1093, 2025, 2284, 3089, 3473, 3899, 4063, 4261
BseMI	GCAATG	3 cut(s)	185, 777, 4293
BseNI	ACTGG	8 cut(s)	525, 538, 726, 1406, 1574, 2312, 2585, 3154
BseRI	GAGGAG	1 cut(s)	1042
BseSI	GKGCMC	1 cut(s)	1744
BseXI	GCAGC	7 cut(s)	123, 617, 2023, 2421, 3097, 3119, 3853
BsgI	GTGCAG	2 cut(s)	758, 1020
Bsh1236I	CGCG	3 cut(s)	1293, 4022, 4271
Bsh1285I	CGRYCG	1 cut(s)	2952
BshFI	GGCC	8 cut(s)	449, 656, 1086, 1125, 1262, 1664, 3264, 3651
BshVI	ATCGAT	1 cut(s)	2904
BsiEI	CGRYCG	1 cut(s)	2952
BsiHKAI	GWGCWC	1 cut(s)	2346
BsiHKCI	CYCGRG	1 cut(s)	2400
BsiSI	CCGG	7 cut(s)	85, 2026, 2109, 2661, 2727, 2991, 3781
BslFI	GGGAC	4 cut(s)	1874, 2643, 3537, 4144
BslI	CCNNNNNNNGG	9 cut(s)	632, 1093, 2025, 2284, 3089, 3473, 3899, 4063, 4261
BsmAI	GTCTC	9 cut(s)	82, 794, 1438, 2592, 2751, 2812, 2939, 3616, 3997
BsmBI	CGTCTC	2 cut(s)	2939, 3997
BsmFI	GGGAC	4 cut(s)	1874, 2643, 3537, 4144
BsmI	GAATGC	2 cut(s)	1667, 4316
BsnI	GGCC	8 cut(s)	449, 656, 1086, 1125, 1262, 1664, 3264, 3651
Bso31I	GGTCTC	1 cut(s)	2592
BsoBI	CYCGRG	1 cut(s)	2400
Bsp119I	TTCGAA	1 cut(s)	3756
Bsp1286I	GDGCHC	2 cut(s)	1744, 2346
Bsp13I	TCCGGA	1 cut(s)	84
Bsp1720I	GCTNAGC	2 cut(s)	501, 1650
BspANI	GGCC	8 cut(s)	449, 656, 1086, 1125, 1262, 1664, 3264, 3651
BspDI	ATCGAT	1 cut(s)	2904
BspEI	TCCGGA	1 cut(s)	84
BspFNI	CGCG	3 cut(s)	1293, 4022, 4271
BspHI	TCATGA	4 cut(s)	157, 1611, 4177, 4249
BspLI	GGNNCC	2 cut(s)	298, 1890
BspMI	ACCTGC	1 cut(s)	1931
BspPI	GGATC	3 cut(s)	1512, 3484, 4069
BspQI	GCTCTTC	3 cut(s)	121, 2351, 3750
BspT104I	TTCGAA	1 cut(s)	3756
BspTNI	GGTCTC	1 cut(s)	2592
BsrDI	GCAATG	3 cut(s)	185, 777, 4293
BsrFI	RCCGGY	1 cut(s)	2108
BsrI	ACTGG	8 cut(s)	525, 538, 726, 1406, 1574, 2312, 2585, 3154
BssAI	RCCGGY	1 cut(s)	2108
BssECI	CCNNGG	6 cut(s)	300, 2219, 2278, 2602, 4094, 4269
BssSI	CACGAG	1 cut(s)	1409
BssT1I	CCWWGG	2 cut(s)	2219, 2602
Bst2BI	CACGAG	1 cut(s)	1409
Bst2UI	CCWGG	4 cut(s)	597, 1367, 1966, 4095
BstAPI	GCANNNNNTGC	2 cut(s)	170, 1871
BstBI	TTCGAA	1 cut(s)	3756
BstC8I	GCNNGC	5 cut(s)	51, 1588, 2074, 2139, 3464
BstDSI	CCRYGG	3 cut(s)	300, 2278, 4269
BstEII	GGTNACC	1 cut(s)	4264
BstFNI	CGCG	3 cut(s)	1293, 4022, 4271
BstH2I	RGCGCY	1 cut(s)	1191
BstHHI	GCGC	2 cut(s)	1190, 3632
BstMAI	GTCTC	9 cut(s)	82, 794, 1438, 2592, 2751, 2812, 2939, 3616, 3997
BstMCI	CGRYCG	1 cut(s)	2952
BstMWI	GCNNNNNNNGC	8 cut(s)	170, 837, 1131, 1871, 2143, 3107, 3598, 4268
BstNI	CCWGG	4 cut(s)	597, 1367, 1966, 4095
BstNSI	RCATGY	3 cut(s)	1590, 2305, 2584
BstPI	GGTNACC	1 cut(s)	4264
BstSCI	CCNGG	6 cut(s)	595, 1365, 1964, 2659, 3780, 4093
BstSFI	CTRYAG	1 cut(s)	2853
BstSLI	GKGCMC	1 cut(s)	1744
BstUI	CGCG	3 cut(s)	1293, 4022, 4271
BstV1I	GCAGC	7 cut(s)	123, 617, 2023, 2421, 3097, 3119, 3853
BstV2I	GAAGAC	2 cut(s)	1497, 2520
BstX2I	RGATCY	1 cut(s)	1517
BstXI	CCANNNNNNTGG	5 cut(s)	489, 2279, 3345, 4101, 4134
BstYI	RGATCY	1 cut(s)	1517
Bsu15I	ATCGAT	1 cut(s)	2904
Bsu36I	CCTNAGG	1 cut(s)	2254
BsuI	GTATCC	2 cut(s)	1940, 2738
BsuRI	GGCC	8 cut(s)	449, 656, 1086, 1125, 1262, 1664, 3264, 3651
BsuTUI	ATCGAT	1 cut(s)	2904
BtgI	CCRYGG	3 cut(s)	300, 2278, 4269
BtgZI	GCGATG	2 cut(s)	258, 3995
BtrI	CACGTC	1 cut(s)	3275
BtsI	GCAGTG	1 cut(s)	495
BveI	ACCTGC	1 cut(s)	1931
Cac8I	GCNNGC	5 cut(s)	51, 1588, 2074, 2139, 3464
CaiI	CAGNNNCTG	1 cut(s)	3812
CciI	TCATGA	4 cut(s)	157, 1611, 4177, 4249
CfoI	GCGC	2 cut(s)	1190, 3632
Cfr10I	RCCGGY	1 cut(s)	2108
Cfr13I	GGNCC	6 cut(s)	620, 1085, 1286, 1888, 1920, 3254
Cfr42I	CCGCGG	1 cut(s)	4272
ClaI	ATCGAT	1 cut(s)	2904
CseI	GACGC	2 cut(s)	1046, 3107
Csp6I	GTAC	9 cut(s)	427, 754, 1196, 2305, 3168, 3710, 3778, 3802, 4091
CspCI	CAANNNNNGTGG	6 cut(s)	1385, 1420, 3500, 3535, 4195, 4230
CviQI	GTAC	9 cut(s)	427, 754, 1196, 2305, 3168, 3710, 3778, 3802, 4091
DraI	TTTAAA	1 cut(s)	438
DraIII	CACNNNGTG	1 cut(s)	1295
DrdI	GACNNNNNNGTC	1 cut(s)	2522
DriI	GACNNNNNGTC	1 cut(s)	1498
DseDI	GACNNNNNNGTC	1 cut(s)	2522
EaeI	YGGCCR	3 cut(s)	447, 1260, 1662
Eam1105I	GACNNNNNGTC	1 cut(s)	1498
Eco130I	CCWWGG	2 cut(s)	2219, 2602
Eco147I	AGGCCT	1 cut(s)	656
Eco31I	GGTCTC	1 cut(s)	2592
Eco32I	GATATC	3 cut(s)	1714, 2016, 2641
Eco47I	GGWCC	5 cut(s)	620, 1286, 1888, 1920, 3254
Eco47III	AGCGCT	1 cut(s)	1189
Eco57I	CTGAAG	5 cut(s)	732, 1148, 1531, 1977, 3897
Eco81I	CCTNAGG	1 cut(s)	2254
Eco88I	CYCGRG	1 cut(s)	2400
Eco91I	GGTNACC	1 cut(s)	4264
EcoO109I	RGGNCCY	1 cut(s)	1888
EcoO65I	GGTNACC	1 cut(s)	4264
EcoRII	CCWGG	4 cut(s)	595, 1365, 1964, 4093
EcoRV	GATATC	3 cut(s)	1714, 2016, 2641
EcoT14I	CCWWGG	2 cut(s)	2219, 2602
EcoT22I	ATGCAT	2 cut(s)	1592, 3823
ErhI	CCWWGG	2 cut(s)	2219, 2602
Esp3I	CGTCTC	2 cut(s)	2939, 3997
FalI	AAGNNNNNCTT	6 cut(s)	100, 132, 3488, 3520, 3562, 3594
FaqI	GGGAC	4 cut(s)	1874, 2643, 3537, 4144
FauI	CCCGC	1 cut(s)	1225
FauNDI	CATATG	2 cut(s)	9, 1510
FbaI	TGATCA	2 cut(s)	154, 2611
Fnu4HI	GCNGC	9 cut(s)	112, 631, 1665, 2037, 2435, 3108, 3111, 3867, 4020
Fsp4HI	GCNGC	9 cut(s)	112, 631, 1665, 2037, 2435, 3108, 3111, 3867, 4020
GlaI	GCGC	2 cut(s)	1189, 3631
GluI	GCNGC	9 cut(s)	112, 631, 1665, 2037, 2435, 3108, 3111, 3867, 4020
GsuI	CTGGAG	1 cut(s)	1349
HaeII	RGCGCY	1 cut(s)	1191
HaeIII	GGCC	8 cut(s)	449, 656, 1086, 1125, 1262, 1664, 3264, 3651
HapII	CCGG	7 cut(s)	85, 2026, 2109, 2661, 2727, 2991, 3781
HgaI	GACGC	2 cut(s)	1046, 3107
HhaI	GCGC	2 cut(s)	1190, 3632
Hin6I	GCGC	2 cut(s)	1188, 3630
HinP1I	GCGC	2 cut(s)	1188, 3630
HincII	GTYRAC	5 cut(s)	606, 808, 1774, 2454, 2578
HindII	GTYRAC	5 cut(s)	606, 808, 1774, 2454, 2578
HindIII	AAGCTT	1 cut(s)	290
HpaI	GTTAAC	1 cut(s)	606
HpaII	CCGG	7 cut(s)	85, 2026, 2109, 2661, 2727, 2991, 3781
Hpy99I	CGWCG	7 cut(s)	2720, 3013, 3064, 3091, 3143, 3212, 4213
HpyCH4IV	ACGT	7 cut(s)	307, 1807, 2375, 2718, 3138, 3274, 4130
HpyF10VI	GCNNNNNNNGC	8 cut(s)	170, 837, 1131, 1871, 2143, 3107, 3598, 4268
HpySE526I	ACGT	7 cut(s)	307, 1807, 2375, 2718, 3138, 3274, 4130
HspAI	GCGC	2 cut(s)	1188, 3630
Kpn2I	TCCGGA	1 cut(s)	84
Ksp22I	TGATCA	2 cut(s)	154, 2611
KspAI	GTTAAC	1 cut(s)	606
KspI	CCGCGG	1 cut(s)	4272
LguI	GCTCTTC	3 cut(s)	121, 2351, 3750
Lsp1109I	GCAGC	7 cut(s)	123, 617, 2023, 2421, 3097, 3119, 3853
MaeII	ACGT	7 cut(s)	307, 1807, 2375, 2718, 3138, 3274, 4130
MfeI	CAATTG	1 cut(s)	3730
MflI	RGATCY	1 cut(s)	1517
MhlI	GDGCHC	2 cut(s)	1744, 2346
MlsI	TGGCCA	1 cut(s)	1262
MluNI	TGGCCA	1 cut(s)	1262
MmeI	TCCRAC	1 cut(s)	506
Mox20I	TGGCCA	1 cut(s)	1262
Mph1103I	ATGCAT	2 cut(s)	1592, 3823
MroI	TCCGGA	1 cut(s)	84
MroXI	GAANNNNTTC	3 cut(s)	1457, 2570, 3574
MscI	TGGCCA	1 cut(s)	1262
MslI	CAYNNNNRTG	6 cut(s)	419, 905, 1533, 1676, 2585, 3119
Msp20I	TGGCCA	1 cut(s)	1262
MspA1I	CMGCKG	4 cut(s)	1070, 2072, 3110, 4271
MspI	CCGG	7 cut(s)	85, 2026, 2109, 2661, 2727, 2991, 3781
MspR9I	CCNGG	6 cut(s)	597, 1367, 1966, 2661, 3782, 4095
MunI	CAATTG	1 cut(s)	3730
Mva1269I	GAATGC	2 cut(s)	1667, 4316
MvaI	CCWGG	4 cut(s)	597, 1367, 1966, 4095
MvnI	CGCG	3 cut(s)	1293, 4022, 4271
MwoI	GCNNNNNNNGC	8 cut(s)	170, 837, 1131, 1871, 2143, 3107, 3598, 4268
NciI	CCSGG	2 cut(s)	2661, 3782
NdeI	CATATG	2 cut(s)	9, 1510
NlaIV	GGNNCC	2 cut(s)	298, 1890
NmeAIII	GCCGAG	3 cut(s)	475, 2855, 3895
NmuCI	GTSAC	5 cut(s)	283, 2986, 3275, 3835, 3933
NsiI	ATGCAT	2 cut(s)	1592, 3823
NspI	RCATGY	3 cut(s)	1590, 2305, 2584
NspV	TTCGAA	1 cut(s)	3756
OliI	CACNNNNGTG	1 cut(s)	905
PaeI	GCATGC	1 cut(s)	1590
PaeR7I	CTCGAG	1 cut(s)	2400
PagI	TCATGA	4 cut(s)	157, 1611, 4177, 4249
PceI	AGGCCT	1 cut(s)	656
PciI	ACATGT	1 cut(s)	2301
PciSI	GCTCTTC	3 cut(s)	121, 2351, 3750
PctI	GAATGC	2 cut(s)	1667, 4316
PdmI	GAANNNNTTC	3 cut(s)	1457, 2570, 3574
PflFI	GACNNNGTC	1 cut(s)	392
PfoI	TCCNGGA	2 cut(s)	1365, 2659
PkrI	GCNGC	9 cut(s)	113, 632, 1666, 2038, 2436, 3109, 3112, 3868, 4021
Ple19I	CGATCG	1 cut(s)	2952
PpuMI	RGGWCCY	1 cut(s)	1888
PscI	ACATGT	1 cut(s)	2301
PshBI	ATTAAT	1 cut(s)	570
PsiI	TTATAA	3 cut(s)	590, 1824, 3582
Psp1406I	AACGTT	1 cut(s)	2375
Psp5II	RGGWCCY	1 cut(s)	1888
Psp6I	CCWGG	4 cut(s)	595, 1365, 1964, 4093
PspEI	GGTNACC	1 cut(s)	4264
PspGI	CCWGG	4 cut(s)	595, 1365, 1964, 4093
PspN4I	GGNNCC	2 cut(s)	298, 1890
PspPI	GGNCC	6 cut(s)	620, 1085, 1286, 1888, 1920, 3254
PspPPI	RGGWCCY	1 cut(s)	1888
PstNI	CAGNNNCTG	1 cut(s)	3812
PsuI	RGATCY	1 cut(s)	1517
PsyI	GACNNNGTC	1 cut(s)	392
PvuI	CGATCG	1 cut(s)	2952
PvuII	CAGCTG	3 cut(s)	1070, 2072, 3110
RsaI	GTAC	9 cut(s)	428, 755, 1197, 2306, 3169, 3711, 3779, 3803, 4092
RsaNI	GTAC	9 cut(s)	427, 754, 1196, 2305, 3168, 3710, 3778, 3802, 4091
RseI	CAYNNNNRTG	6 cut(s)	419, 905, 1533, 1676, 2585, 3119
SacII	CCGCGG	1 cut(s)	4272
SapI	GCTCTTC	3 cut(s)	121, 2351, 3750
SatI	GCNGC	9 cut(s)	112, 631, 1665, 2037, 2435, 3108, 3111, 3867, 4020
Sau96I	GGNCC	6 cut(s)	620, 1085, 1286, 1888, 1920, 3254
ScrFI	CCNGG	6 cut(s)	597, 1367, 1966, 2661, 3782, 4095
SduI	GDGCHC	2 cut(s)	1744, 2346
SfcI	CTRYAG	1 cut(s)	2853
Sfr274I	CTCGAG	1 cut(s)	2400
Sfr303I	CCGCGG	1 cut(s)	4272
SfuI	TTCGAA	1 cut(s)	3756
SgrBI	CCGCGG	1 cut(s)	4272
SinI	GGWCC	5 cut(s)	620, 1286, 1888, 1920, 3254
SlaI	CTCGAG	1 cut(s)	2400
SmiMI	CAYNNNNRTG	6 cut(s)	419, 905, 1533, 1676, 2585, 3119
SmlI	CTYRAG	6 cut(s)	356, 365, 1468, 2147, 2400, 2942
SmoI	CTYRAG	6 cut(s)	356, 365, 1468, 2147, 2400, 2942
SphI	GCATGC	1 cut(s)	1590
SseBI	AGGCCT	1 cut(s)	656
SspI	AATATT	2 cut(s)	1008, 3752
StuI	AGGCCT	1 cut(s)	656
StyD4I	CCNGG	6 cut(s)	595, 1365, 1964, 2659, 3780, 4093
StyI	CCWWGG	2 cut(s)	2219, 2602
TaiI	ACGT	7 cut(s)	310, 1810, 2378, 2721, 3141, 3277, 4133
TaqII	GACCGA	2 cut(s)	272, 2519
TatI	WGTACW	4 cut(s)	1195, 2304, 3167, 3801
TauI	GCSGC	2 cut(s)	1667, 4022
TseFI	GTSAC	5 cut(s)	283, 2986, 3275, 3835, 3933
TseI	GCWGC	7 cut(s)	111, 630, 2036, 2434, 3107, 3110, 3866
Tsp45I	GTSAC	5 cut(s)	283, 2986, 3275, 3835, 3933
TspGWI	ACGGA	6 cut(s)	1714, 1791, 2645, 2854, 3026, 3048
Tth111I	GACNNNGTC	1 cut(s)	392
VpaK11BI	GGWCC	5 cut(s)	620, 1286, 1888, 1920, 3254
VspI	ATTAAT	1 cut(s)	570
XapI	RAATTY	4 cut(s)	667, 1726, 2924, 3309
XbaI	TCTAGA	1 cut(s)	3658
XceI	RCATGY	3 cut(s)	1590, 2305, 2584
XhoI	CTCGAG	1 cut(s)	2400
XmnI	GAANNNNTTC	3 cut(s)	1457, 2570, 3574
Zsp2I	ATGCAT	2 cut(s)	1592, 3823

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.