Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr04

Orthogroup ID

OG0008205

Physical Location & Seq

Genomic Coordinates Forward (+)

27818738 .. 27825396

Gene Structure 6659 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD04G1187600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4344 bp

ATGGCTCAGATGGTTGGCAGAGATGAGATAGAGTCACTAAGAATCGAGCTGGAAGAGTTCGGAAGAAGCTTTAGGGCATCTTTTCGGAGTCATTCCTCCAGTTTCCGAGTCAATTCAGCGTTGAGTTCTGCCAAAGATGATGCGGAGGATGTTCAATTTGCTGAACAGTGGGCAGCCATTAATAGATTGCCAACATTCGAACGGTTAAAATCATCTTTGTTTGACAAGGATGAGGGAAACGAGTTTGATGGTGAAGGAAAGCGAGTTGTTGATGTTACCAAGCTTCGAGCTCTGGAACGGCATCTATTCATTGAGAAGCTCATCCAACACATTGAAAATGATAACCTTCGACTCTTGCGCAAAATTAGAAACAGGATTGACAAGGTTGGCGTAAAATTGCCTACTGTGGAGGTGAGATATAAGAATGTTTGTGTGGAAGCAGTGTGTGAGGTGGTTCACGGAAAGCCCCTCCCAACTCTTTGGAACTCAGCCAAAAGCATGCTTTCAATCTTTGCCAGGTTTCCGGGTTCAAAGTCACACGAGGCCAAGATAAGCATTATTAAAGATTTCAGTGGTACTATAAAGCCAGGAAGATTTACTTTGCTGCTTGGGCCCCCGGGGTGTGGGAAGACCTCCCTTCTTAAGGCGCTATCCTGGAATCTGGACAAGTCCCTCAAGTTCTCAGGTGAAGTTACATACAATGGACACAAACTATCGGATTTTGTCCCCCAGAAAACATCAGCTTATATAAGCCAACTCGATGTGCACATTCCCGAAATGACTGTGAGGGAAACACTCGATTTTTCAGCCCGCTGTCAGGGTATTGGAAGCCGAGCTGATGTAATGCTGGAAGTCAGTAAAAAGGAGAAGGAGGCAGGAATTATACCGGATCCAGATGTAGATACCTACATGAAGGCAATTTCTGTTCAAGGACTAAAACGAACCCTTCAGACGGACTACATTTTGAAGATCCTTGGACTTGATATATGTGCTGACACGCTGGTTGGAGATGCCATGAGACGAGGCATCTCTGGTGGTCAAAAGAAGAGACTCACAACAGCGGAGATGATCATTGGTCCCACAAAAGCCTTGTTCATGGACGAAATAACAAATGGCCTAGACAGTTCCACTGCATTCCAGATTGTTTCTTGTCTTCAGCAGCTGGTGCACATAACAGACGCTACTTTACTAGTTTCGCTTCTTCAGCCAGCACCAGAGGCCTTTGATCTCTTTGATGACCTTATTTTAATGTCGGAAGGGAAGGTTGTTTATCATGGTCCACGCGATCATGTCTTGGAATTTTTTGAGGATTGTGGGTTTAAGTGTCCTGAGAGGAAAGGGGTTGCGGATTTCATTCAAGAGGTAATCTCTGAAAAGGATCAGTCATACTATTGGAACCACACTGAACCTCACAATTATGTATCCGTTGATATGTTCTCGGAAAAATTCAAGGCATCTTGTTTTGGGAAGAAACTAGATGAAGACCTGTTAAGGACAAATGATAAGTCCCAAAACCATGAGAATGCTCACTCCTTTAGCGTGTATTCTCTTTCAAAACGGGAACTCTTTCGAGCTTGTGCATCAAGAGAACTTCTTCTCATGAGGAGGAACTCTTTTATCTATATATTCAAAACAAGTCAGCTTATCCTCATTGCATTTATTACAATGACCGTGTTTTTGAGGACTCGAATGGATATTGATGTTACTCATGGTAATTACTACATGGGGTCCTTGTTCTTTGCTCTCACAATACTTGTCGTTGATGGAATTCCAGAGATGTCCATGACACTTCAGCGACTAGAAGTATTTTACAAACAGAGAGACCTTTGTTTTTACCCGGCTTGGGCTTACGCAGTTCCTGCAACACTTCTAAAAGTTCCTGTTTCACTTGTGGTATCCCTGGTTTGGACTTCTCTTGCCTATTATGTCATTGGATACAGTCCCGAGCCACAGAGGTTCTTCTGCCAGTTCTTGATGTTTTTTGCTGTTCACTTTACATCATTGTCCATGTTTCGCTTCCTGGCCTCGTTCTTTCAGACTATGGTTGCCACTATGACAGCCGGTAGCTTTGCATTATTGTTTCTCATGCTATTTAGTGGATTCGTTATCCAAAAACCTTCCATGCCTGTTTGGTTACAGTGGGGTTTTTGGGTTTCTCCCCTGACATATGGAGAGATAGGCCTCTCTGTCAACGAGTTTCTTTCGCCGCGATGGCAAAAGATGCTATCCCCAAATTCTACTACTACTATTGGGAGACAAATACTTGACAGCCGTGGCCTGAACTTTGAAGGATATTGCTACTGGATATCACTTGGTGCCTTGTTTGGATTCACAATAGTTTTCAATATCGGATTCACCTTGTCATTGAGTTTCTTCAAGTCTCCTGGGACATCTCGTGGGATCATTTCACACGAAAAGCTCTCTCAAATTCAAAGTACTAATGACAACCTCAGTGATGCCAATTTGAAAGAGAAGTCAACAAATCATCCTCCTAAAACAACTGAGAACGGAAGAATGGTCTTACCTTTCACTCCCTTGACGGTGGTGTTCCAAGATGTGCAGTACTATGTTATTCCTGAGACAACCAGGGAACCGGGATTTAATCAGAAAAAGCTCCAGCTTCTGAGTGATGTTACAGGAGTGTTTAGGCCCGGTATCCTTGCAGCACTGATGGGTGTGAGTGGAGCTGGGAAAACTACGCTTCTTGATGTTCTTGCTGGCAGAAAGACTAGTGGCTACATTGAAGGAGACGTAAAGATTGGTGGATATCCCAAGGTTCAAGAAACATTTGCTAGGGTATTGGGTTACTGTGAGCAGACCGATGTACATTCTCCACAAATCACGGTAGAAGAATCTTTGATCTTTTCTGCTTGGCTGCGTCTGGCTTCGCAGATTGACTCAAAAACAAAAGCTGAGTTTGTGAATGAAGTTCTTGAGACAATTGAGCTTGATGGAATAAAAGATGCCTTGGTTGGCATACCTGGTGTTAGTGGTCTGTCAACGGAGCAGCGTAAACGCCTTACAATTGCCGTGGAGCTTGTTTCAAACCCCGCCATAATCTTCATGGATGAACCTACGACTGGTTTGGATGCAAGAGCTGCTGCGATAGTGATGCGGGCAGTGAAGAATGTTGCTAATACAGGAAGAACAATTGTTTGCACCATCCACCAACCGAATATCGATATATTTGAGTCATTTGATGAGCTAATTCTATTGAAAGCCGGAGGGCGTATAATCTACTCTGGACCGTTGGGACAACACTCGAGTAGGGTTATAGAATATTTTCAGAGTATTCCCGGGGTTCAAAAGATTCGGGATAACTACAATCCAGCAACATGGATGTTAGACATCACTTCTACATCAGCTGAAGCTGAACTTGGTGTTGATTTTGCCCAAATATACGAAAAATCTTCTTCACATGAGAACAATATAGAGCTCGTAAGACAGTTGAGTACCCCACCTCCTGGCTCAACAGATCTGCATTTTGCCACCCGATTTTCACAAAATGGCTGGAGACAATTCAAGTCTTGCCTATGGAAGCAGAACTTGTCTTACTGGAGGAGTCCCGCATACAACTTGATGCGCATCATGCATGCGCTTGCAACATCTCTAATTTTCGGGGCCTTATTTTGGAACCAAGGACAAAATCTAACCAACCAGCAAAACTTGTTTAATGTACTTGGTTCAATGTTTGCCGGTGTCTTATTCTTGGGCATAAATAACTGCTCAACCGTTTTGCAACACGTTGCAACGGAGAGAAATGTCATGTACCGCGAAAAATTTTCAGGGATGTATTCTCCGTGGGCATTTTCACTTGCACAGGTTGCAGTTGAATTTCCCTATCTATTTGTCCAGGCAGCCACATTTACGATCGTCACATATCCAATGATCGGATACTATGGGTCATCATACAAGGTTTTCTGGTACTTTTATGCTATTTTTTGCTCAGTCCTGTACTACAATTACATGGGATTGATGCTCGTGTCGTTGACGCCAAACTACTTGGTAGCTGCAATTCTCGCCTCAGTTTTCTACACATTGTACAATCTGTTTGCTGGTTTTCTGATTCCTAAACCGCAAATTCCGAAATGGTGGATTTGGTTGTATTACATGACTCCTACATCTTGGTCAATGAATGGCTTGCTTACTTCACAATATGGAGACATAAACAAGGAGGTTATCGTGTTTGGGGAAACCAAAACTGTGTCTGCCTTCTTAGAGGATTACTTCGGGTTTCACCACGATCAGCTGGCTTTGGTGGCGGTAGTTCTCATTGCTTTTCCGATTGCTTTTGCATCCATTTTCGCCTTCTGCATAGGACATTTGAACTTCCAGAGGCGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006810 GO:0006855 GO:0007275 GO:0008150 GO:0009506 GO:0009719 GO:0009725 GO:0009733 GO:0009914 GO:0009926 GO:0009987 GO:0010033 GO:0010243 GO:0010817 GO:0014070 GO:0015399 GO:0015405 GO:0015893 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022622 GO:0022804 GO:0022857 GO:0030054 GO:0031224 GO:0032501 GO:0032502 GO:0032870 GO:0042221 GO:0042493 GO:0042623 GO:0042626 GO:0043492 GO:0044425 GO:0044464 GO:0048364 GO:0048731 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055044 GO:0055085 GO:0060918 GO:0065007 GO:0065008 GO:0070887 GO:0071229 GO:0071310 GO:0071365 GO:0071366 GO:0071407 GO:0071417 GO:0071495 GO:0071944 GO:0080026 GO:0099402 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane ABC_tran ABC_trans_N PDR_assoc

Protein Analysis

1448

Amino Acids

163.33

Weight (kDa)

7.33

Isoelectric Point (pI)

36.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	188 - 371	6.5e-19	ABC transporter
ABC2_membrane_7	PF19055	402 - 456	4.9e-06	ABC-2 type transporter
ABC2_membrane	PF01061	522 - 733	5.1e-46	ABC-2 type transporter
PDR_assoc	PF08370	738 - 802	3.5e-23	Plant PDR ABC transporter associated
ABC_tran	PF00005	876 - 1027	9.2e-20	ABC transporter
ABC2_membrane_7	PF19055	1056 - 1119	4e-06	ABC-2 type transporter
ABC2_membrane	PF01061	1172 - 1386	1e-55	ABC-2 type transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008205)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37280 AT2G37280 AT2G37280 AT2G37280 AT3G53480
fragaria_vesca	FvH4_6g08380 FvH4_6g08380 FvH4_6g08380
malus_domestica	MD04G1187600.v1.1
prunus_persica	Prupe.6G306100_v2.0.a1
pyrus_communis	pycom04g16590
rosa_chinensis	RchiOBHm_Chr3g0458321
rosa_laevigata	RLG00000025169
rosa_multiflora	Rmu_sc0007338.1_g000006
rosa_roxburghii	Rroxscaffold_6G00421170
rosa_rugosa	Rorug03G0025800 Rorug03G0025800 Rorug03G0025800
rosa_samantha	Rh3AG086600 Rh3BG089400 Rh3CG089800 Rh3DG090400
rosa_wichuraiana	Rw3G007350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	359, 3584
AccB1I	GGYRCC	1 cut(s)	2315
AccB7I	CCANNNNNTGG	1 cut(s)	3464
AccII	CGCG	3 cut(s)	1284, 2209, 3774
AclWI	GGATC	5 cut(s)	884, 897, 964, 1386, 2408
AcsI	RAATTY	8 cut(s)	1298, 1445, 1767, 2233, 2427, 3779, 3833, 4080
AcuI	CTGAAG	5 cut(s)	932, 1139, 1187, 1775, 3387
AcyI	GRCGYC	1 cut(s)	3992
AdeI	CACNNNGTG	1 cut(s)	2315
AflII	CTTAAG	1 cut(s)	641
AflIII	ACRYGT	1 cut(s)	3742
AhlI	ACTAGT	2 cut(s)	1189, 2729
AjuI	GAANNNNNNNTTGG	2 cut(s)	3360, 3392
Alw21I	GWGCWC	4 cut(s)	292, 768, 1170, 3438
Alw44I	GTGCAC	2 cut(s)	764, 1166
AlwI	GGATC	5 cut(s)	884, 897, 964, 1386, 2408
AlwNI	CAGNNNCTG	3 cut(s)	1162, 1859, 2623
Ama87I	CYCGRG	4 cut(s)	616, 1943, 3262, 3296
AoxI	GGCC	9 cut(s)	543, 611, 1114, 1218, 2022, 2179, 2275, 2648, 3621
ApaI	GGGCCC	1 cut(s)	615
ApaLI	GTGCAC	2 cut(s)	764, 1166
ApoI	RAATTY	8 cut(s)	1298, 1445, 1767, 2233, 2427, 3779, 3833, 4080
ArsI	GACNNNNNNTTYG	4 cut(s)	1490, 1522, 1660, 1692
AseI	ATTAAT	1 cut(s)	180
Asp700I	GAANNNNTTC	3 cut(s)	1566, 1593, 3282
AspLEI	GCGC	4 cut(s)	360, 649, 3585, 3598
AspS9I	GGNCC	8 cut(s)	611, 612, 1076, 1277, 1728, 2649, 3245, 3621
AsuC2I	CCSGG	8 cut(s)	525, 617, 618, 1838, 2595, 2652, 3297, 3298
AsuHPI	GGTGA	5 cut(s)	263, 424, 698, 2347, 4229
AsuII	TTCGAA	1 cut(s)	198
AvaI	CYCGRG	4 cut(s)	616, 1943, 3262, 3296
AvaII	GGWCC	4 cut(s)	1076, 1277, 1728, 3245
BaeGI	GKGCMC	3 cut(s)	615, 768, 1170
BamHI	GGATCC	1 cut(s)	889
BanI	GGYRCC	1 cut(s)	2315
BanII	GRGCYC	3 cut(s)	292, 615, 3438
BauI	CACGAG	3 cut(s)	539, 2394, 3980
BbsI	GAAGAC	3 cut(s)	635, 1145, 1488
Bbv12I	GWGCWC	4 cut(s)	292, 768, 1170, 3438
BccI	CCATC	7 cut(s)	4, 242, 1757, 2205, 2665, 2945, 3170
BceAI	ACGGC	3 cut(s)	314, 2256, 3014
BcgI	CGANNNNNNTGC	2 cut(s)	3094, 3128
BciVI	GTATCC	5 cut(s)	1432, 1906, 1928, 2666, 3887
BclI	TGATCA	1 cut(s)	1068
BcnI	CCSGG	8 cut(s)	525, 617, 618, 1838, 2595, 2652, 3297, 3298
BcuI	ACTAGT	2 cut(s)	1189, 2729
BfaI	CTAG	6 cut(s)	1118, 1190, 1475, 1799, 2730, 2793
BfoI	RGCGCY	1 cut(s)	650
BfrI	CTTAAG	1 cut(s)	641
BfuI	GTATCC	5 cut(s)	1432, 1906, 1928, 2666, 3887
BglI	GCCNNNNNGGC	1 cut(s)	2212
BglII	AGATCT	1 cut(s)	3475
BmcAI	AGTACT	2 cut(s)	2437, 2564
Bme18I	GGWCC	4 cut(s)	1076, 1277, 1728, 3245
BmeT110I	CYCGRG	4 cut(s)	616, 1943, 3262, 3296
BmgT120I	GGNCC	8 cut(s)	611, 612, 1076, 1277, 1728, 2649, 3245, 3621
BpiI	GAAGAC	3 cut(s)	635, 1145, 1488
BplI	GAGNNNNNCTC	2 cut(s)	1352, 1384
BpmI	CTGGAG	4 cut(s)	82, 2600, 3532, 3577
Bpu14I	TTCGAA	1 cut(s)	198
BpuEI	CTTGAG	2 cut(s)	659, 2954
BpuMI	CCSGG	8 cut(s)	525, 617, 618, 1838, 2595, 2652, 3297, 3298
Bsa29I	ATCGAT	1 cut(s)	3180
BsaBI	GATNNNNATC	1 cut(s)	3584
BsaHI	GRCGYC	1 cut(s)	3992
BsaI	GGTCTC	1 cut(s)	1815
BsaWI	WCCGGW	1 cut(s)	886
BsaXI	ACNNNNNCTCC	2 cut(s)	3445, 3475
Bse118I	RCCGGY	2 cut(s)	2060, 3695
Bse1I	ACTGG	5 cut(s)	99, 1966, 2306, 3085, 3560
Bse3DI	GCAATG	2 cut(s)	1650, 4272
Bse8I	GATNNNNATC	1 cut(s)	3584
BseCI	ATCGAT	1 cut(s)	3180
BseJI	GATNNNNATC	1 cut(s)	3584
BseMI	GCAATG	2 cut(s)	1650, 4272
BseNI	ACTGG	5 cut(s)	99, 1966, 2306, 3085, 3560
BseRI	GAGGAG	2 cut(s)	1618, 3574
BseSI	GKGCMC	3 cut(s)	615, 768, 1170
BseYI	CCCAGC	1 cut(s)	2687
BsgI	GTGCAG	1 cut(s)	2579
Bsh1236I	CGCG	3 cut(s)	1284, 2209, 3774
Bsh1285I	CGRYCG	1 cut(s)	3873
BshFI	GGCC	9 cut(s)	545, 613, 1116, 1220, 2024, 2181, 2277, 2650, 3623
BshNI	GGYRCC	1 cut(s)	2315
BshVI	ATCGAT	1 cut(s)	3180
BsiEI	CGRYCG	1 cut(s)	3873
BsiHKAI	GWGCWC	4 cut(s)	292, 768, 1170, 3438
BsiHKCI	CYCGRG	4 cut(s)	616, 1943, 3262, 3296
BslFI	GGGAC	8 cut(s)	655, 710, 1062, 1492, 1926, 2401, 3267, 3549
BsmBI	CGTCTC	2 cut(s)	1012, 2742
BsmFI	GGGAC	8 cut(s)	655, 710, 1062, 1492, 1926, 2401, 3267, 3549
BsmI	GAATGC	2 cut(s)	1133, 1528
BsnI	GGCC	9 cut(s)	545, 613, 1116, 1220, 2024, 2181, 2277, 2650, 3623
Bso31I	GGTCTC	1 cut(s)	1815
BsoBI	CYCGRG	4 cut(s)	616, 1943, 3262, 3296
Bsp119I	TTCGAA	1 cut(s)	198
Bsp120I	GGGCCC	1 cut(s)	611
Bsp1286I	GDGCHC	5 cut(s)	292, 615, 768, 1170, 3438
Bsp1407I	TGTACA	2 cut(s)	2824, 4041
BspANI	GGCC	9 cut(s)	545, 613, 1116, 1220, 2024, 2181, 2277, 2650, 3623
BspDI	ATCGAT	1 cut(s)	3180
BspFNI	CGCG	3 cut(s)	1284, 2209, 3774
BspHI	TCATGA	1 cut(s)	1599
BspPI	GGATC	5 cut(s)	884, 897, 964, 1386, 2408
BspT104I	TTCGAA	1 cut(s)	198
BspT107I	GGYRCC	1 cut(s)	2315
BspTI	CTTAAG	1 cut(s)	641
BspTNI	GGTCTC	1 cut(s)	1815
BsrDI	GCAATG	2 cut(s)	1650, 4272
BsrFI	RCCGGY	2 cut(s)	2060, 3695
BsrGI	TGTACA	2 cut(s)	2824, 4041
BsrI	ACTGG	5 cut(s)	99, 1966, 2306, 3085, 3560
BssAI	RCCGGY	2 cut(s)	2060, 3695
BssNI	GRCGYC	1 cut(s)	3992
BssSI	CACGAG	3 cut(s)	539, 2394, 3980
BssT1I	CCWWGG	4 cut(s)	973, 2772, 2967, 3637
Bst2BI	CACGAG	3 cut(s)	539, 2394, 3980
Bst6I	CTCTTC	2 cut(s)	48, 1040
BstACI	GRCGYC	1 cut(s)	3992
BstAFI	CTTAAG	1 cut(s)	641
BstAPI	GCANNNNNTGC	5 cut(s)	1165, 1859, 2221, 3098, 3824
BstAUI	TGTACA	2 cut(s)	2824, 4041
BstBI	TTCGAA	1 cut(s)	198
BstC8I	GCNNGC	9 cut(s)	500, 811, 1209, 2719, 3117, 3594, 3600, 4142, 4251
BstDSI	CCRYGG	3 cut(s)	2272, 3030, 3800
BstENI	CCTNNNNNAGG	1 cut(s)	641
BstFNI	CGCG	3 cut(s)	1284, 2209, 3774
BstH2I	RGCGCY	1 cut(s)	650
BstHHI	GCGC	4 cut(s)	360, 649, 3585, 3598
BstMCI	CGRYCG	1 cut(s)	3873
BstNSI	RCATGY	2 cut(s)	502, 3596
BstSLI	GKGCMC	3 cut(s)	615, 768, 1170
BstUI	CGCG	3 cut(s)	1284, 2209, 3774
BstV2I	GAAGAC	3 cut(s)	635, 1145, 1488
BstX2I	RGATCY	3 cut(s)	889, 969, 3475
BstXI	CCANNNNNNTGG	2 cut(s)	480, 3336
BstYI	RGATCY	3 cut(s)	889, 969, 3475
Bsu15I	ATCGAT	1 cut(s)	3180
BsuI	GTATCC	5 cut(s)	1432, 1906, 1928, 2666, 3887
BsuRI	GGCC	9 cut(s)	545, 613, 1116, 1220, 2024, 2181, 2277, 2650, 3623
BsuTUI	ATCGAT	1 cut(s)	3180
BtgI	CCRYGG	3 cut(s)	2272, 3030, 3800
BtgZI	GCGATG	1 cut(s)	2224
BtsI	GCAGTG	3 cut(s)	447, 1128, 3126
BtsIMutI	CAGTG	9 cut(s)	173, 447, 577, 1128, 1401, 2144, 2458, 2666, 3126
Cac8I	GCNNGC	9 cut(s)	500, 811, 1209, 2719, 3117, 3594, 3600, 4142, 4251
CaiI	CAGNNNCTG	3 cut(s)	1162, 1859, 2623
CciI	TCATGA	1 cut(s)	1599
CfoI	GCGC	4 cut(s)	360, 649, 3585, 3598
Cfr10I	RCCGGY	2 cut(s)	2060, 3695
Cfr13I	GGNCC	8 cut(s)	611, 612, 1076, 1277, 1728, 2649, 3245, 3621
Cfr9I	CCCGGG	2 cut(s)	616, 3296
ClaI	ATCGAT	1 cut(s)	3180
CseI	GACGC	3 cut(s)	1187, 2867, 4000
CsiI	ACCWGGT	1 cut(s)	2980
CspCI	CAANNNNNGTGG	2 cut(s)	3012, 3047
DraIII	CACNNNGTG	1 cut(s)	2315
Eam1104I	CTCTTC	2 cut(s)	48, 1040
EarI	CTCTTC	2 cut(s)	48, 1040
Ecl136II	GAGCTC	2 cut(s)	290, 3436
Eco130I	CCWWGG	4 cut(s)	973, 2772, 2967, 3637
Eco147I	AGGCCT	2 cut(s)	1220, 2181
Eco24I	GRGCYC	3 cut(s)	292, 615, 3438
Eco31I	GGTCTC	1 cut(s)	1815
Eco32I	GATATC	2 cut(s)	2307, 2768
Eco47I	GGWCC	4 cut(s)	1076, 1277, 1728, 3245
Eco53kI	GAGCTC	2 cut(s)	290, 3436
Eco57I	CTGAAG	5 cut(s)	932, 1139, 1187, 1775, 3387
Eco88I	CYCGRG	4 cut(s)	616, 1943, 3262, 3296
EcoICRI	GAGCTC	2 cut(s)	290, 3436
EcoNI	CCTNNNNNAGG	1 cut(s)	641
EcoO109I	RGGNCCY	3 cut(s)	612, 1728, 3621
EcoRI	GAATTC	1 cut(s)	1767
EcoRV	GATATC	2 cut(s)	2307, 2768
EcoT14I	CCWWGG	4 cut(s)	973, 2772, 2967, 3637
EcoT22I	ATGCAT	1 cut(s)	3594
EcoT38I	GRGCYC	3 cut(s)	292, 615, 3438
ErhI	CCWWGG	4 cut(s)	973, 2772, 2967, 3637
Esp3I	CGTCTC	2 cut(s)	1012, 2742
FalI	AAGNNNNNCTT	6 cut(s)	583, 615, 3360, 3392, 3530, 3562
FaqI	GGGAC	8 cut(s)	655, 710, 1062, 1492, 1926, 2401, 3267, 3549
FauI	CCCGC	4 cut(s)	818, 3058, 3108, 3574
FauNDI	CATATG	1 cut(s)	2167
FbaI	TGATCA	1 cut(s)	1068
FriOI	GRGCYC	3 cut(s)	292, 615, 3438
FspAI	RTGCGCAY	1 cut(s)	3584
FspBI	CTAG	6 cut(s)	1118, 1190, 1475, 1799, 2730, 2793
FspI	TGCGCA	2 cut(s)	359, 3584
GlaI	GCGC	4 cut(s)	359, 648, 3584, 3597
GsaI	CCCAGC	1 cut(s)	2691
GsuI	CTGGAG	4 cut(s)	82, 2600, 3532, 3577
HaeII	RGCGCY	1 cut(s)	650
HaeIII	GGCC	9 cut(s)	545, 613, 1116, 1220, 2024, 2181, 2277, 2650, 3623
HgaI	GACGC	3 cut(s)	1187, 2867, 4000
HhaI	GCGC	4 cut(s)	360, 649, 3585, 3598
Hin1I	GRCGYC	1 cut(s)	3992
Hin6I	GCGC	4 cut(s)	358, 647, 3583, 3596
HinP1I	GCGC	4 cut(s)	358, 647, 3583, 3596
HincII	GTYRAC	4 cut(s)	2191, 2478, 3000, 3990
HindII	GTYRAC	4 cut(s)	2191, 2478, 3000, 3990
HindIII	AAGCTT	2 cut(s)	67, 281
HphI	GGTGA	5 cut(s)	263, 424, 698, 2347, 4229
HpyCH4IV	ACGT	2 cut(s)	2751, 3744
HpySE526I	ACGT	2 cut(s)	2751, 3744
Hsp92I	GRCGYC	1 cut(s)	3992
HspAI	GCGC	4 cut(s)	358, 647, 3583, 3596
Ksp22I	TGATCA	1 cut(s)	1068
LmnI	GCTCC	4 cut(s)	2619, 2684, 3004, 3034
MabI	ACCWGGT	1 cut(s)	2980
MaeI	CTAG	6 cut(s)	1118, 1190, 1475, 1799, 2730, 2793
MaeII	ACGT	2 cut(s)	2751, 3744
MaeIII	GTNAC	9 cut(s)	33, 274, 534, 691, 1702, 2133, 2632, 2804, 3874
MfeI	CAATTG	3 cut(s)	2940, 3024, 3150
MflI	RGATCY	3 cut(s)	889, 969, 3475
MhlI	GDGCHC	5 cut(s)	292, 615, 768, 1170, 3438
MmeI	TCCRAC	3 cut(s)	349, 985, 1233
Mph1103I	ATGCAT	1 cut(s)	3594
MroXI	GAANNNNTTC	3 cut(s)	1566, 1593, 3282
MseI	TTAA	9 cut(s)	180, 206, 561, 642, 1247, 1320, 1490, 2601, 3672
MslI	CAYNNNNRTG	2 cut(s)	1416, 1521
MspA1I	CMGCKG	5 cut(s)	813, 1061, 1162, 3365, 4249
MspCI	CTTAAG	1 cut(s)	641
MunI	CAATTG	3 cut(s)	2940, 3024, 3150
Mva1269I	GAATGC	2 cut(s)	1133, 1528
MvnI	CGCG	3 cut(s)	1284, 2209, 3774
NciI	CCSGG	8 cut(s)	525, 617, 618, 1838, 2595, 2652, 3297, 3298
NdeI	CATATG	1 cut(s)	2167
NmeAIII	GCCGAG	1 cut(s)	857
NmuCI	GTSAC	3 cut(s)	33, 534, 3874
NsbI	TGCGCA	2 cut(s)	359, 3584
NsiI	ATGCAT	1 cut(s)	3594
NspI	RCATGY	2 cut(s)	502, 3596
NspV	TTCGAA	1 cut(s)	198
PaeI	GCATGC	2 cut(s)	502, 3596
PaeR7I	CTCGAG	1 cut(s)	3262
PagI	TCATGA	1 cut(s)	1599
PceI	AGGCCT	2 cut(s)	1220, 2181
PctI	GAATGC	2 cut(s)	1133, 1528
PdmI	GAANNNNTTC	3 cut(s)	1566, 1593, 3282
PfeI	GAWTC	8 cut(s)	42, 658, 2100, 2328, 2352, 2852, 3310, 4066
PflMI	CCANNNNNTGG	1 cut(s)	3464
PfoI	TCCNGGA	1 cut(s)	653
Ple19I	CGATCG	1 cut(s)	3873
PpuMI	RGGWCCY	1 cut(s)	1728
PshBI	ATTAAT	1 cut(s)	180
Psp124BI	GAGCTC	2 cut(s)	292, 3438
Psp5II	RGGWCCY	1 cut(s)	1728
PspFI	CCCAGC	1 cut(s)	2687
PspOMI	GGGCCC	1 cut(s)	611
PspPI	GGNCC	8 cut(s)	611, 612, 1076, 1277, 1728, 2649, 3245, 3621
PspPPI	RGGWCCY	1 cut(s)	1728
PspXI	VCTCGAGB	1 cut(s)	3262
PsrI	GAACNNNNNNTAC	2 cut(s)	3536, 3568
PstNI	CAGNNNCTG	3 cut(s)	1162, 1859, 2623
PsuI	RGATCY	3 cut(s)	889, 969, 3475
PvuI	CGATCG	1 cut(s)	3873
PvuII	CAGCTG	3 cut(s)	1162, 3365, 4249
RseI	CAYNNNNRTG	2 cut(s)	1416, 1521
SacI	GAGCTC	2 cut(s)	292, 3438
SaqAI	TTAA	9 cut(s)	180, 206, 561, 642, 1247, 1320, 1490, 2601, 3672
Sau96I	GGNCC	8 cut(s)	611, 612, 1076, 1277, 1728, 2649, 3245, 3621
ScaI	AGTACT	2 cut(s)	2437, 2564
SduI	GDGCHC	5 cut(s)	292, 615, 768, 1170, 3438
SexAI	ACCWGGT	1 cut(s)	2980
Sfr274I	CTCGAG	1 cut(s)	3262
SfuI	TTCGAA	1 cut(s)	198
SinI	GGWCC	4 cut(s)	1076, 1277, 1728, 3245
SlaI	CTCGAG	1 cut(s)	3262
SmaI	CCCGGG	2 cut(s)	618, 3298
SmiMI	CAYNNNNRTG	2 cut(s)	1416, 1521
SmlI	CTYRAG	4 cut(s)	641, 674, 2933, 3262
SmoI	CTYRAG	4 cut(s)	641, 674, 2933, 3262
SpeI	ACTAGT	2 cut(s)	1189, 2729
SphI	GCATGC	2 cut(s)	502, 3596
SseBI	AGGCCT	2 cut(s)	1220, 2181
SspI	AATATT	1 cut(s)	3281
SspMI	CTAG	6 cut(s)	1118, 1190, 1475, 1799, 2730, 2793
SstI	GAGCTC	2 cut(s)	292, 3438
StuI	AGGCCT	2 cut(s)	1220, 2181
StyI	CCWWGG	4 cut(s)	973, 2772, 2967, 3637
TaiI	ACGT	2 cut(s)	2754, 3747
TaqII	GACCGA	1 cut(s)	2834
TatI	WGTACW	6 cut(s)	2435, 2562, 2824, 3676, 3954, 4041
TauI	GCSGC	1 cut(s)	2209
TfiI	GAWTC	8 cut(s)	42, 658, 2100, 2328, 2352, 2852, 3310, 4066
Tru1I	TTAA	9 cut(s)	180, 206, 561, 642, 1247, 1320, 1490, 2601, 3672
Tru9I	TTAA	9 cut(s)	180, 206, 561, 642, 1247, 1320, 1490, 2601, 3672
TscAI	CASTG	9 cut(s)	173, 447, 577, 1135, 1408, 2144, 2458, 2673, 3126
TseFI	GTSAC	3 cut(s)	33, 534, 3874
Tsp45I	GTSAC	3 cut(s)	33, 534, 3874
TspDTI	ATGAA	9 cut(s)	298, 926, 1084, 1342, 1494, 2940, 3052, 3084, 4148
TspGWI	ACGGA	7 cut(s)	474, 968, 1414, 2523, 3017, 3767, 3789
TspMI	CCCGGG	2 cut(s)	616, 3296
TspRI	CASTG	9 cut(s)	173, 447, 577, 1135, 1408, 2144, 2458, 2673, 3126
Van91I	CCANNNNNTGG	1 cut(s)	3464
Vha464I	CTTAAG	1 cut(s)	641
VneI	GTGCAC	2 cut(s)	764, 1166
VpaK11BI	GGWCC	4 cut(s)	1076, 1277, 1728, 3245
VspI	ATTAAT	1 cut(s)	180
XagI	CCTNNNNNAGG	1 cut(s)	641
XapI	RAATTY	8 cut(s)	1298, 1445, 1767, 2233, 2427, 3779, 3833, 4080
XceI	RCATGY	2 cut(s)	502, 3596
XcmI	CCANNNNNNNNNTGG	1 cut(s)	3061
XhoI	CTCGAG	1 cut(s)	3262
XmaI	CCCGGG	2 cut(s)	616, 3296
XmnI	GAANNNNTTC	3 cut(s)	1566, 1593, 3282
XspI	CTAG	6 cut(s)	1118, 1190, 1475, 1799, 2730, 2793
ZrmI	AGTACT	2 cut(s)	2437, 2564
Zsp2I	ATGCAT	1 cut(s)	3594

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.