Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0008205

Physical Location & Seq

Genomic Coordinates Reverse (-)

7026154 .. 7033473

Gene Structure 7320 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ42499

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4332 bp

ATGGCTCAGATGGTTGGCAGAGATGACATAGAGTCACTTAGAATTGAGTTGGAAGAGATAGGAAGAAGCTTTAGGTCATCAATTCAGAGTCGTAACTCCAGTTTCCGAGCCAATTCAGCATTGAGTTCTGCCAAAGATGACACTGATGCTCAATATGCTGTGCAGTGGGCAGCCATTGAGAGACTGCCAACGTTTGAACGGCTCAAATCATCTTTGTTTGACAAGGGTGATGATGGAAATGAACTTGATGGTGAAGGAAAGCAGGTGGTTGATGTTACCAAGCTTGGAGCTATGGAAAAGCATGTCTTCATAGATAAGCTCATCAAGCACATTGAGAATGACAACCTTCGTCTCTTACGTAAAATCAGAAAAAGGATAGACAAGGTTGGAGTAAAGTTGCCCACTGTGGAGGTGAGGTATAAGAATCTCAGTGTCGAAGCAGTGTGTGAGGTAGTTCATGGAAAGCCCCTCCCAACTCTTTGGAACTCTGTCAGAAGCACGCTTTCTCTCTTTGCCAAGTTTCTAGGTTCCAAGACACAAGAGGCCAAGATAAGCATTATCAAAGACTTTTGTGGTTCAATAAAGCCTGGAAGGTTAACTTTACTGCTTGGCCCCCCAGGATGTGGGAAGACCTCCTTTTTAAAGGCTCTATCAGGAAATCTGGAAAAATCGCTCAAGTTCTCTGGTGAAGTTACTTACAATGGACAGAAGCTAGCAGAGTTCATCCCCCAGAAAACATCAGCTTATATAAGCCAATTCGACCTGCATATTCCTCAGATGACTGTCAGGGAAATACTTGATTTTTCAGCTCGCTGTCAGGGTATTGGAAGCCGAGCCGATATTATGCTGGAAGTCAGTAAAAGGGAGAAGGAGGCAGGGATTATTCCACATCCAGATATAGATACTTACATGAAGGCAATTTCTCTCGAAGGACTGAAAAGAACCCTCCAGACGGACTACATTTTGAAGATCCTTGGACTTGATATATGTGCTGACACTCTAGTTGGAGATGCCATGCTAAGAGGTATATCTGGTGGTCAAAAGAAGAGGTTGACAACAGCGGAGATGATCATTGGTCCCACAAAAGCTTTGTTCATGGATGAGATAACAAATGGTCTAGACAGTTCCACTGCATTTCAAATTGTTGCTTGTCTTCAGCAGCTGGTGCATATAACAGATTCTACTTTACTAGTTTCTCTTCTTCAGCCAGCACCGGAGACATTTGAGCTCTTTGATGACCTTATTTTAATGTCAGAAGGGAAGATTGTTTATCATGGTCCACGGGATCATGTCTTGGAGTTTTTTGAGGATTGTGGGTTCAAGTGTCCTGAGAGGAAAGGGGTTGCTGATTTCATCCAAGAGGTAATCTCTAAGAAAGATCAAGCACACTATTGGTACCGCATGGAACCTCACAATTATGTCTCAGTTGATATGCTCTCAAAAAAATTAAAGGCATCTTCTTTTGGGAAGAAGCTAGATGAGGATCTTTTAGAGCCATTTGATAAGCTTAAAGACAATAACAATGCTCTTTCCTTTAGTGTGTATTCTCTTTCTAAATGGGAACTTTTTAGAGCTTGTTCGTCAAGAGAACTTCTTCTCATGAAGAGGAATTCTTTTATCTATGTATTCAAGACAGTTCAGATTATCATCATTGCATTTATCACCATGACTGTATTTCTGAGGACTCGTATGGATATTGATGTTCTTCATGCAAACTACTACATGGGTTCCCTATTCTTTGCTCTTACCATACTTCTCGTGGATGGAATTCCTGAGTTGTCTATGACACTTCAAAGACTAGAAGTTTTCTATAAGCAGAGAGACCTGTGTTTTTATCCAGCTTGGGCTTATGCAATTCCGGCAACACTACTGAAAGTACCTGTTTCATTTGTGGAAGCCCTGGTTTGGACTTCTCTTACTTACTATGTCATTGGATACAGTCCTGAGTTCCAAAAGTTCATCCTCCAGTTCTTTCTACTTTTTGCCGTTCATTTAACATCAATATCCATGTTTCGCTTCCTGGCATCATTCTTTCAGACCATGGTTGCCGCAATGACAGCCGGTAGTTTTGCAATATTGTTTCTGTTACTATTCAGCGGATTCATTATCAAAAAACCTTCCATGCCTGGTTGGTTAGGGTGGGGATTTTGGGTTTCCCCACTGACATATGGGGAGATAGGCCTCTCTGTGAACGAGTTTCTTTCTCCAAGATGGCAAACAATGCCATCAACAAACATTACTATCGGGCATGAAACCCTTGAAAGCCGTGGACTAAACTTTGATGGATATTTCTACTGGATATCACTTGGTGCCTTATTTGGATTCACAATGATTTTCAACATAGGATACATCTTGTCCTTGAGTTTCTTGAAGTCTCCCGGATCATCTCATGGTATCATTTCACATGAAAAGCTTGCCCAAATTCACAGAACTGATGATTCCCTCGATGATGCCCAAGTGAAAGAAAAGTCTAGAATTCATCCTTCTAAAACCACTGGCAAGATGGTCTTACCCTTTACTCCATTGACACTGGTTTTCCAAGATGTGCAATACTATGTTATTCCTATGGAAACCAGGGAGCCAGGATTTAATCAGAAGAAACTTCAACTTCTAAGTGACATTACAGGGGCATTTAGACCTGGTGTTCTTACAGCATTGATGGGCGTCAGTGGCGCTGGGAAAACTACTCTTCTTGATGTTCTGGCAGGCAGAAAGACTACTGGCTGCATTGAAGGAGACATAAAGATTGGTGGATATCCCAAGGTTCAAGAAACATTTGCTAGGGTATTGGGTTACTGTGAGCAAACCGATGTTCATTCTCCACAAATCACTGTAGAAGAGTCTTTGATGTTTTCTGCTTGGCTGCGCCTGGCTTCTCAGATTGACTCAAAGACAAAAACTGAGTTTGTCAATGAAGTCCTTGAGACCATTGAACTTGATGGAATAAAAGATGCCTTGGTTGGAATACCTGGTGTTAGTGGTCTATCAAATGAGCAGCGTAAGCGGCTTACAATTGCTGTCGAGCTTGTTTCAAATCCCTCCATAATCTTCATGGATGAACCTACAACTGGTTTGGATGCAAGAGCTGCTGCAATAGTCATGCGAGCAGTGAAGAATGTAGCTGATACGGGAAGAACAATTGTTTGCACCATCCACCAACCAAATATTGATATATTTGAAGCATTTGATGAGCTAATTCTTTTGAAAACTGGAGGGCGTATGATCTACTCAGGACAGGTGGGTCAGCACTCGAGTAGAGTTATCGAATATTTTCAGAGTATTCCTGGCGTTCAAAAGATCAAAAGTAACTACAATCCAGCTACATGGATGTTAGACATCACTTCTACATCAGCTGAAGCTGAACATGGTATTGATTTTGCCCAAATATACAGAGAATCTAGTTTATATGGGAATAATATAGAGCTTGCAAGACAGTTGAGTACTCCACCTCCTGGTTCCAGAGATCTGCATTTTGCTACACGCTTTTCACAAAATGGCTGGATGCAGTTCAAATCTTGCCTATGGAAGCAGCACTTGTCTTATTGGAGGAGTCCGTCATATAACTTGATGCGCATCATGCATACGGTTGTATCATCTCTAATTTTCGGGACATTGTATTGGAACCAAGGGAGGAAAATAACCGACCAGCAGAACTTATTCAATATACTTGGTTCTATGTATGCCGGTGTCATCTTCTTGGGCATAAATAACTGCGCAACTGTTCTGCAATATGTTGCCACAGAGAGAACTGTCATGTATCGTGAAAAATTTGTGGGGATGTATTCACCATTGGCCTTTTCGGTTGCACAGGTGGTGGTTGAACTTCCCTATATATTTATCCAGGCAGTCTTATTTATGATCATCACATATCCAATGATTGGGTATTATGCTTCAGCATATAAGGTTTTCTGGTACTTCTATGCCTTATTTTGTTCACTGCTATACTACAATTACATGGGAATGATGCTCGTTTCGTTGACGCCAAACTTCATGGTAGCTGCAATTCTATCTTCAGTGTTCTACACAGTGTATAACCTGTTTGCTGGTTTTTTGATTCCTAAGCCGCAAATTCCGAAATGGTGGATTTGGTTGTATTACCTGACTCCCTCATCTTGGTCACTAAATGGTTTGCTCACTTCACAATATGGAGACATAAACAAGGAGATTATCATATTTGGGGAACCCAAAACAGTGTCTGCCTTCTTGAAAGACTACTTTGGGTTTCACCATGATCAGTTGGCTCTGGTGGCACTAGTTCTCATTGCATTTCCCATAGCTTTTGCATCTATTTTCGCCTACTGTATCGGACGGTTGAACTTTCAGAGGAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006810 GO:0006855 GO:0007275 GO:0008150 GO:0009506 GO:0009719 GO:0009725 GO:0009733 GO:0009914 GO:0009926 GO:0009987 GO:0010033 GO:0010243 GO:0010817 GO:0014070 GO:0015399 GO:0015405 GO:0015893 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022622 GO:0022804 GO:0022857 GO:0030054 GO:0031224 GO:0032501 GO:0032502 GO:0032870 GO:0042221 GO:0042493 GO:0042623 GO:0042626 GO:0043492 GO:0044425 GO:0044464 GO:0048364 GO:0048731 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055044 GO:0055085 GO:0060918 GO:0065007 GO:0065008 GO:0070887 GO:0071229 GO:0071310 GO:0071365 GO:0071366 GO:0071407 GO:0071417 GO:0071495 GO:0071944 GO:0080026 GO:0099402 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane ABC_tran ABC_trans_N PDR_assoc

Protein Analysis

1443

Amino Acids

162.94

Weight (kDa)

8.27

Isoelectric Point (pI)

36.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_trans_N	PF14510	113 - 162	3.8e-06	ABC-transporter N-terminal
ABC_tran	PF00005	191 - 371	2.5e-18	ABC transporter
ABC2_membrane_7	PF19055	402 - 455	2.6e-06	ABC-2 type transporter
ABC2_membrane	PF01061	522 - 733	2.5e-46	ABC-2 type transporter
PDR_assoc	PF08370	738 - 800	4.6e-21	Plant PDR ABC transporter associated
ABC_tran	PF00005	871 - 1023	7.3e-21	ABC transporter
ABC2_membrane	PF01061	1169 - 1382	9.8e-57	ABC-2 type transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

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Orthologous Genes (Group: OG0008205)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37280 AT2G37280 AT2G37280 AT2G37280 AT3G53480
fragaria_vesca	FvH4_6g08380 FvH4_6g08380 FvH4_6g08380
malus_domestica	MD04G1187600.v1.1
prunus_persica	Prupe.6G306100_v2.0.a1
pyrus_communis	pycom04g16590
rosa_chinensis	RchiOBHm_Chr3g0458321
rosa_laevigata	RLG00000025169
rosa_multiflora	Rmu_sc0007338.1_g000006
rosa_roxburghii	Rroxscaffold_6G00421170
rosa_rugosa	Rorug03G0025800 Rorug03G0025800 Rorug03G0025800
rosa_samantha	Rh3AG086600 Rh3BG089400 Rh3CG089800 Rh3DG090400
rosa_wichuraiana	Rw3G007350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	253
AasI	GACNNNNNNGTC	1 cut(s)	3240
Acc16I	TGCGCA	2 cut(s)	3572, 3715
Acc36I	ACCTGC	2 cut(s)	253, 771
Acc65I	GGTACC	1 cut(s)	1395
AccB1I	GGYRCC	2 cut(s)	1395, 2309
AccB7I	CCANNNNNTGG	3 cut(s)	623, 3452, 3878
AciI	CCGC	6 cut(s)	1061, 1399, 2049, 2097, 3004, 4064
AclI	AACGTT	1 cut(s)	191
AclWI	GGATC	4 cut(s)	964, 1293, 1491, 2389
AcsI	RAATTY	6 cut(s)	1609, 1767, 2421, 2475, 3767, 4068
AcuI	CTGAAG	5 cut(s)	1139, 1187, 3375, 3876, 3996
AcyI	GRCGYC	2 cut(s)	2664, 3980
AdeI	CACNNNGTG	1 cut(s)	2309
AfaI	GTAC	4 cut(s)	1397, 1878, 3442, 3914
AfiI	CCNNNNNNNGG	7 cut(s)	623, 952, 1905, 3068, 3452, 3878, 4113
AhdI	GACNNNNNGTC	1 cut(s)	31
AhlI	ACTAGT	2 cut(s)	1189, 4252
AloI	GAACNNNNNNTCC	2 cut(s)	1301, 1333
Alw21I	GWGCWC	1 cut(s)	1230
Alw26I	GTCTC	9 cut(s)	175, 356, 1211, 1426, 1815, 2379, 2730, 2918, 4143
AlwI	GGATC	4 cut(s)	964, 1293, 1491, 2389
AlwNI	CAGNNNCTG	2 cut(s)	1162, 4196
Ama87I	CYCGRG	1 cut(s)	3250
AoxI	GGCC	4 cut(s)	543, 610, 2179, 3792
ApeKI	GCWGC	9 cut(s)	170, 1159, 2724, 2863, 2995, 3086, 3089, 3529, 3998
ApoI	RAATTY	6 cut(s)	1609, 1767, 2421, 2475, 3767, 4068
Asp700I	GAANNNNTTC	3 cut(s)	1593, 3270, 3656
Asp718I	GGTACC	1 cut(s)	1395
AspLEI	GCGC	4 cut(s)	2675, 2868, 3573, 3716
AspS9I	GGNCC	3 cut(s)	611, 1076, 1277
AsuC2I	CCSGG	1 cut(s)	2379
AsuHPI	GGTGA	7 cut(s)	239, 263, 424, 698, 1654, 3777, 4217
AsuNHI	GCTAGC	1 cut(s)	712
AvaI	CYCGRG	1 cut(s)	3250
AvaII	GGWCC	2 cut(s)	1076, 1277
BaeI	ACNNNNGTAYC	2 cut(s)	3573, 3606
BanI	GGYRCC	2 cut(s)	1395, 2309
BanII	GRGCYC	1 cut(s)	1230
BauI	CACGAG	1 cut(s)	1757
BbsI	GAAGAC	3 cut(s)	298, 635, 1145
Bbv12I	GWGCWC	1 cut(s)	1230
BbvI	GCAGC	9 cut(s)	182, 1171, 2711, 2850, 3007, 3073, 3076, 3541, 3985
BceAI	ACGGC	3 cut(s)	215, 1970, 2250
BciVI	GTATCC	2 cut(s)	1928, 2339
BclI	TGATCA	3 cut(s)	1068, 3858, 4231
BcnI	CCSGG	1 cut(s)	2379
BcoDI	GTCTC	9 cut(s)	175, 356, 1211, 1426, 1815, 2379, 2730, 2918, 4143
BcuI	ACTAGT	2 cut(s)	1189, 4252
BfmI	CTRYAG	1 cut(s)	2832
BfoI	RGCGCY	1 cut(s)	2676
BfuAI	ACCTGC	2 cut(s)	253, 771
BfuI	GTATCC	2 cut(s)	1928, 2339
BglII	AGATCT	1 cut(s)	3463
BmcAI	AGTACT	1 cut(s)	3442
Bme18I	GGWCC	2 cut(s)	1076, 1277
BmeRI	GACNNNNNGTC	1 cut(s)	31
BmeT110I	CYCGRG	1 cut(s)	3250
BmgT120I	GGNCC	3 cut(s)	611, 1076, 1277
BmtI	GCTAGC	1 cut(s)	716
BpiI	GAAGAC	3 cut(s)	298, 635, 1145
BplI	GAGNNNNNCTC	2 cut(s)	1352, 1384
BpmI	CTGGAG	4 cut(s)	82, 932, 1949, 3231
Bpu10I	CCTNAGC	1 cut(s)	4059
BpuEI	CTTGAG	3 cut(s)	659, 2380, 2942
BpuMI	CCSGG	1 cut(s)	2379
BsaAI	YACGTR	1 cut(s)	359
BsaBI	GATNNNNATC	3 cut(s)	1482, 1646, 3572
BsaHI	GRCGYC	2 cut(s)	2664, 3980
BsaI	GGTCTC	2 cut(s)	1815, 2918
BsaWI	WCCGGW	1 cut(s)	1213
BsaXI	ACNNNNNCTCC	4 cut(s)	401, 431, 3433, 3463
Bsc4I	CCNNNNNNNGG	7 cut(s)	623, 952, 1905, 3068, 3452, 3878, 4113
Bse118I	RCCGGY	2 cut(s)	2060, 3683
Bse1I	ACTGG	8 cut(s)	99, 1966, 2300, 2500, 2535, 2725, 3073, 3214
Bse3DI	GCAATG	3 cut(s)	1650, 2058, 4260
Bse8I	GATNNNNATC	3 cut(s)	1482, 1646, 3572
BseJI	GATNNNNATC	3 cut(s)	1482, 1646, 3572
BseLI	CCNNNNNNNGG	7 cut(s)	623, 952, 1905, 3068, 3452, 3878, 4113
BseMI	GCAATG	3 cut(s)	1650, 2058, 4260
BseNI	ACTGG	8 cut(s)	99, 1966, 2300, 2500, 2535, 2725, 3073, 3214
BseRI	GAGGAG	1 cut(s)	3562
BseXI	GCAGC	9 cut(s)	182, 1171, 2711, 2850, 3007, 3073, 3076, 3541, 3985
BseYI	CCCAGC	1 cut(s)	2675
BsgI	GTGCAG	1 cut(s)	182
BshFI	GGCC	4 cut(s)	545, 612, 2181, 3794
BshNI	GGYRCC	2 cut(s)	1395, 2309
BsiHKAI	GWGCWC	1 cut(s)	1230
BsiHKCI	CYCGRG	1 cut(s)	3250
BsiSI	CCGG	5 cut(s)	1214, 1859, 2061, 2379, 3684
BslFI	GGGAC	2 cut(s)	1062, 3622
BslI	CCNNNNNNNGG	7 cut(s)	623, 952, 1905, 3068, 3452, 3878, 4113
BsmAI	GTCTC	9 cut(s)	175, 356, 1211, 1426, 1815, 2379, 2730, 2918, 4143
BsmBI	CGTCTC	1 cut(s)	356
BsmFI	GGGAC	2 cut(s)	1062, 3622
BsnI	GGCC	4 cut(s)	545, 612, 2181, 3794
Bso31I	GGTCTC	2 cut(s)	1815, 2918
BsoBI	CYCGRG	1 cut(s)	3250
Bsp1286I	GDGCHC	1 cut(s)	1230
Bsp19I	CCATGG	1 cut(s)	2040
BspACI	CCGC	6 cut(s)	1061, 1399, 2049, 2097, 3004, 4064
BspANI	GGCC	4 cut(s)	545, 612, 2181, 3794
BspHI	TCATGA	1 cut(s)	1599
BspMI	ACCTGC	2 cut(s)	253, 771
BspOI	GCTAGC	1 cut(s)	716
BspPI	GGATC	4 cut(s)	964, 1293, 1491, 2389
BspT107I	GGYRCC	2 cut(s)	1395, 2309
BspTNI	GGTCTC	2 cut(s)	1815, 2918
BsrDI	GCAATG	3 cut(s)	1650, 2058, 4260
BsrFI	RCCGGY	2 cut(s)	2060, 3683
BsrI	ACTGG	8 cut(s)	99, 1966, 2300, 2500, 2535, 2725, 3073, 3214
BssAI	RCCGGY	2 cut(s)	2060, 3683
BssNI	GRCGYC	2 cut(s)	2664, 3980
BssSI	CACGAG	1 cut(s)	1757
BssT1I	CCWWGG	5 cut(s)	973, 2040, 2760, 2955, 3625
Bst2BI	CACGAG	1 cut(s)	1757
Bst6I	CTCTTC	6 cut(s)	48, 1040, 1203, 1598, 2694, 2832
BstACI	GRCGYC	2 cut(s)	2664, 3980
BstAPI	GCANNNNNTGC	3 cut(s)	1165, 2221, 3086
BstBAI	YACGTR	1 cut(s)	359
BstC8I	GCNNGC	8 cut(s)	500, 714, 811, 1209, 2415, 2707, 3105, 3426
BstDSI	CCRYGG	3 cut(s)	1280, 2040, 2266
BstH2I	RGCGCY	1 cut(s)	2676
BstHHI	GCGC	4 cut(s)	2675, 2868, 3573, 3716
BstMAI	GTCTC	9 cut(s)	175, 356, 1211, 1426, 1815, 2379, 2730, 2918, 4143
BstNSI	RCATGY	1 cut(s)	305
BstSFI	CTRYAG	1 cut(s)	2832
BstSNI	TACGTA	1 cut(s)	359
BstV1I	GCAGC	9 cut(s)	182, 1171, 2711, 2850, 3007, 3073, 3076, 3541, 3985
BstV2I	GAAGAC	3 cut(s)	298, 635, 1145
BstX2I	RGATCY	3 cut(s)	969, 1483, 3463
BstXI	CCANNNNNNTGG	2 cut(s)	480, 3324
BstYI	RGATCY	3 cut(s)	969, 1483, 3463
BsuI	GTATCC	2 cut(s)	1928, 2339
BsuRI	GGCC	4 cut(s)	545, 612, 2181, 3794
BtgI	CCRYGG	3 cut(s)	1280, 2040, 2266
BtsI	GCAGTG	5 cut(s)	170, 447, 1128, 3114, 3935
BveI	ACCTGC	2 cut(s)	253, 771
Cac8I	GCNNGC	8 cut(s)	500, 714, 811, 1209, 2415, 2707, 3105, 3426
CaiI	CAGNNNCTG	2 cut(s)	1162, 4196
CciI	TCATGA	1 cut(s)	1599
CfoI	GCGC	4 cut(s)	2675, 2868, 3573, 3716
Cfr10I	RCCGGY	2 cut(s)	2060, 3683
Cfr13I	GGNCC	3 cut(s)	611, 1076, 1277
CseI	GACGC	2 cut(s)	2653, 3988
CsiI	ACCWGGT	2 cut(s)	2638, 2968
Csp6I	GTAC	4 cut(s)	1396, 1877, 3441, 3913
CviQI	GTAC	4 cut(s)	1396, 1877, 3441, 3913
DraI	TTTAAA	1 cut(s)	642
DraIII	CACNNNGTG	1 cut(s)	2309
DrdI	GACNNNNNNGTC	1 cut(s)	3240
DriI	GACNNNNNGTC	1 cut(s)	31
DseDI	GACNNNNNNGTC	1 cut(s)	3240
Eam1104I	CTCTTC	6 cut(s)	48, 1040, 1203, 1598, 2694, 2832
Eam1105I	GACNNNNNGTC	1 cut(s)	31
EarI	CTCTTC	6 cut(s)	48, 1040, 1203, 1598, 2694, 2832
Ecl136II	GAGCTC	1 cut(s)	1228
Eco105I	TACGTA	1 cut(s)	359
Eco130I	CCWWGG	5 cut(s)	973, 2040, 2760, 2955, 3625
Eco147I	AGGCCT	1 cut(s)	2181
Eco24I	GRGCYC	1 cut(s)	1230
Eco31I	GGTCTC	2 cut(s)	1815, 2918
Eco32I	GATATC	2 cut(s)	2301, 2756
Eco47I	GGWCC	2 cut(s)	1076, 1277
Eco53kI	GAGCTC	1 cut(s)	1228
Eco57I	CTGAAG	5 cut(s)	1139, 1187, 3375, 3876, 3996
Eco88I	CYCGRG	1 cut(s)	3250
EcoICRI	GAGCTC	1 cut(s)	1228
EcoRI	GAATTC	3 cut(s)	1609, 1767, 2475
EcoRV	GATATC	2 cut(s)	2301, 2756
EcoT14I	CCWWGG	5 cut(s)	973, 2040, 2760, 2955, 3625
EcoT22I	ATGCAT	1 cut(s)	3582
EcoT38I	GRGCYC	1 cut(s)	1230
ErhI	CCWWGG	5 cut(s)	973, 2040, 2760, 2955, 3625
Esp3I	CGTCTC	1 cut(s)	356
FaqI	GGGAC	2 cut(s)	1062, 3622
FauNDI	CATATG	1 cut(s)	2167
FbaI	TGATCA	3 cut(s)	1068, 3858, 4231
FriOI	GRGCYC	1 cut(s)	1230
FspAI	RTGCGCAY	1 cut(s)	3572
FspI	TGCGCA	2 cut(s)	3572, 3715
GlaI	GCGC	4 cut(s)	2674, 2867, 3572, 3715
GsaI	CCCAGC	1 cut(s)	2679
GsuI	CTGGAG	4 cut(s)	82, 932, 1949, 3231
HaeII	RGCGCY	1 cut(s)	2676
HaeIII	GGCC	4 cut(s)	545, 612, 2181, 3794
HapII	CCGG	5 cut(s)	1214, 1859, 2061, 2379, 3684
HgaI	GACGC	2 cut(s)	2653, 3988
HhaI	GCGC	4 cut(s)	2675, 2868, 3573, 3716
Hin1I	GRCGYC	2 cut(s)	2664, 3980
Hin6I	GCGC	4 cut(s)	2673, 2866, 3571, 3714
HinP1I	GCGC	4 cut(s)	2673, 2866, 3571, 3714
HincII	GTYRAC	3 cut(s)	597, 1053, 3978
HindII	GTYRAC	3 cut(s)	597, 1053, 3978
HindIII	AAGCTT	5 cut(s)	67, 281, 1086, 1505, 2411
HpaI	GTTAAC	1 cut(s)	597
HpaII	CCGG	5 cut(s)	1214, 1859, 2061, 2379, 3684
HphI	GGTGA	7 cut(s)	239, 263, 424, 698, 1654, 3777, 4217
Hpy166II	GTNNAC	7 cut(s)	597, 1053, 1280, 2191, 2270, 3935, 3978
Hpy8I	GTNNAC	7 cut(s)	597, 1053, 1280, 2191, 2270, 3935, 3978
HpyCH4IV	ACGT	2 cut(s)	191, 358
HpySE526I	ACGT	2 cut(s)	191, 358
Hsp92I	GRCGYC	2 cut(s)	2664, 3980
HspAI	GCGC	4 cut(s)	2673, 2866, 3571, 3714
KpnI	GGTACC	1 cut(s)	1399
Ksp22I	TGATCA	3 cut(s)	1068, 3858, 4231
KspAI	GTTAAC	1 cut(s)	597
LmnI	GCTCC	2 cut(s)	287, 2578
Lsp1109I	GCAGC	9 cut(s)	182, 1171, 2711, 2850, 3007, 3073, 3076, 3541, 3985
MabI	ACCWGGT	2 cut(s)	2638, 2968
MaeII	ACGT	2 cut(s)	191, 358
MaeIII	GTNAC	9 cut(s)	33, 92, 274, 691, 2085, 2615, 2792, 3305, 4116
MfeI	CAATTG	2 cut(s)	3012, 3138
MflI	RGATCY	3 cut(s)	969, 1483, 3463
MhlI	GDGCHC	1 cut(s)	1230
MlyI	GAGTC	7 cut(s)	41, 97, 1678, 2849, 2879, 3559, 4096
MmeI	TCCRAC	4 cut(s)	30, 367, 985, 2941
Mph1103I	ATGCAT	1 cut(s)	3582
MroXI	GAANNNNTTC	3 cut(s)	1593, 3270, 3656
MseI	TTAA	7 cut(s)	596, 641, 1247, 1448, 1509, 1994, 2589
MslI	CAYNNNNRTG	2 cut(s)	1416, 3959
MspA1I	CMGCKG	4 cut(s)	1061, 1162, 2097, 3353
MspI	CCGG	5 cut(s)	1214, 1859, 2061, 2379, 3684
MunI	CAATTG	2 cut(s)	3012, 3138
NciI	CCSGG	1 cut(s)	2379
NcoI	CCATGG	1 cut(s)	2040
NdeI	CATATG	1 cut(s)	2167
NheI	GCTAGC	1 cut(s)	712
NmeAIII	GCCGAG	1 cut(s)	857
NmuCI	GTSAC	3 cut(s)	33, 2615, 4116
NsbI	TGCGCA	2 cut(s)	3572, 3715
NsiI	ATGCAT	1 cut(s)	3582
NspI	RCATGY	1 cut(s)	305
PaeR7I	CTCGAG	1 cut(s)	3250
PagI	TCATGA	1 cut(s)	1599
PaqCI	CACCTGC	1 cut(s)	253
PceI	AGGCCT	1 cut(s)	2181
PcsI	WCGNNNNNNNCGW	1 cut(s)	355
PdmI	GAANNNNTTC	3 cut(s)	1593, 3270, 3656
PfeI	GAWTC	7 cut(s)	424, 1178, 2100, 2322, 2438, 3395, 4054
PflMI	CCANNNNNTGG	3 cut(s)	623, 3452, 3878
PfoI	TCCNGGA	1 cut(s)	2377
PleI	GAGTC	7 cut(s)	40, 96, 1678, 2848, 2879, 3558, 4096
PpsI	GAGTC	7 cut(s)	40, 96, 1678, 2848, 2879, 3558, 4096
Ppu21I	YACGTR	1 cut(s)	359
Psp124BI	GAGCTC	1 cut(s)	1230
Psp1406I	AACGTT	1 cut(s)	191
PspFI	CCCAGC	1 cut(s)	2675
PspPI	GGNCC	3 cut(s)	611, 1076, 1277
PspXI	VCTCGAGB	1 cut(s)	3250
PstNI	CAGNNNCTG	2 cut(s)	1162, 4196
PsuI	RGATCY	3 cut(s)	969, 1483, 3463
PvuII	CAGCTG	2 cut(s)	1162, 3353
RsaI	GTAC	4 cut(s)	1397, 1878, 3442, 3914
RsaNI	GTAC	4 cut(s)	1396, 1877, 3441, 3913
RseI	CAYNNNNRTG	2 cut(s)	1416, 3959
SacI	GAGCTC	1 cut(s)	1230
SaqAI	TTAA	7 cut(s)	596, 641, 1247, 1448, 1509, 1994, 2589
Sau96I	GGNCC	3 cut(s)	611, 1076, 1277
ScaI	AGTACT	1 cut(s)	3442
SchI	GAGTC	7 cut(s)	41, 97, 1678, 2849, 2879, 3559, 4096
SduI	GDGCHC	1 cut(s)	1230
SexAI	ACCWGGT	2 cut(s)	2638, 2968
SfcI	CTRYAG	1 cut(s)	2832
Sfr274I	CTCGAG	1 cut(s)	3250
SinI	GGWCC	2 cut(s)	1076, 1277
SlaI	CTCGAG	1 cut(s)	3250
SmiMI	CAYNNNNRTG	2 cut(s)	1416, 3959
SmlI	CTYRAG	4 cut(s)	674, 2359, 2921, 3250
SmoI	CTYRAG	4 cut(s)	674, 2359, 2921, 3250
SnaBI	TACGTA	1 cut(s)	359
SpeI	ACTAGT	2 cut(s)	1189, 4252
SseBI	AGGCCT	1 cut(s)	2181
SsiI	CCGC	6 cut(s)	1061, 1399, 2049, 2097, 3004, 4064
SspI	AATATT	3 cut(s)	2076, 3166, 3269
SstI	GAGCTC	1 cut(s)	1230
StuI	AGGCCT	1 cut(s)	2181
StyI	CCWWGG	5 cut(s)	973, 2040, 2760, 2955, 3625
TaiI	ACGT	2 cut(s)	194, 361
TaqI	TCGA	7 cut(s)	435, 759, 927, 2445, 3021, 3251, 3264
TatI	WGTACW	1 cut(s)	3440
TauI	GCSGC	3 cut(s)	2051, 3007, 4066
TfiI	GAWTC	7 cut(s)	424, 1178, 2100, 2322, 2438, 3395, 4054
Tru1I	TTAA	7 cut(s)	596, 641, 1247, 1448, 1509, 1994, 2589
Tru9I	TTAA	7 cut(s)	596, 641, 1247, 1448, 1509, 1994, 2589
TseFI	GTSAC	3 cut(s)	33, 2615, 4116
TseI	GCWGC	9 cut(s)	170, 1159, 2724, 2863, 2995, 3086, 3089, 3529, 3998
Tsp45I	GTSAC	3 cut(s)	33, 2615, 4116
TspGWI	ACGGA	2 cut(s)	968, 3543
Van91I	CCANNNNNTGG	3 cut(s)	623, 3452, 3878
VpaK11BI	GGWCC	2 cut(s)	1076, 1277
XapI	RAATTY	6 cut(s)	1609, 1767, 2421, 2475, 3767, 4068
XbaI	TCTAGA	2 cut(s)	1117, 2471
XceI	RCATGY	1 cut(s)	305
XcmI	CCANNNNNNNNNTGG	3 cut(s)	1756, 2500, 3049
XhoI	CTCGAG	1 cut(s)	3250
XmnI	GAANNNNTTC	3 cut(s)	1593, 3270, 3656
ZrmI	AGTACT	1 cut(s)	3442
Zsp2I	ATGCAT	1 cut(s)	3582

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.