Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0008205

Physical Location & Seq

Genomic Coordinates Reverse (-)

4952126 .. 4960744

Gene Structure 8619 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g08380.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4479 bp

ATGTATATTCTAACAAGCATCAGTTTTCAACTTACGTTTTCAACTTGCTTGGACAGCAAGGATAAGAAGAAATGCCAGCAAAGAATCCTGCATATTTATATACTCCTCCAGTCAGTTATTCTACAAATTGTCCCAAAGTTAACAACTATGGCACAGATGGTTGGCAGAGATGACATAGAGTCGCTGAGAATTGAGTTGGAAGAGATAGGAAGAAGCTTCAGGTCATCAATTCAGAGTCAGAACTCCAGCTTTCGAGCCAATTCAACATTGAGTTCTGCCAAAGATGACACTGATGCTCAATATGCTGTGCAGTGGGAAGCCATTGAGAGACTGCCAACTTTTGAACGGCTCAAGTCATCTTTGTTTGACAAGGGTGATGATGGAAGTGAACTTGATGGTGAAGGAAAGCGGGTGGTTGATGTTACCAAGCTTGGAGCTATGGAAAAGCATGTCTTCATAGAAAAGCTCATCAAGCACATTGAGAATGACAACCTTCGTCTCTTGCGAAAAATTAGAAAAAGGATCGACAAGGTTGGAGTAAAATTGCCCACTGTGGAGGTGAGGTATAAGAATCTGAGTGTGGAAGCAGTGTGTGAGGTAGTTCATGGAAAGCCCCTCCCAACTCTTTGGAACTCTGTCAGAAGCACACTTTCTCTCTTCACCAAGTTTCCAGGTTCGAAGACACATGAGGCCAAGATAAGTATTATCAAAGACTTTTGCGGTTCAATAAAGCCTGGAAGGTTAACTTTACTGCTTGGTCCCCCAGGATGTGGGAAGACCTCCTTTTTAAAGGCTCTATCAGGGAATCTAGAAAAATCACTCAAGTTCTCTGGTGAAGTTACTTACAATGGACTGAAGCTAGCAGAGTTCGTTCCCCAGAAAACGTCAGCTTACATAAGCCAGTTTGACCTGCATATTCCTCAGATGACTGTCAGGGAAATACTTGATTTTTCAGCCCGCTGTCAGGGTGTTGGAAGCCGAGCCGACATTATGCTGGAAGTCAGTAAAAGAGAGAAGGAGGCAGGAATTATTCCAGATCCAGATACAGATACCTACATGAAGGCTATTTCTCTCCAAGGACTAAAAAGAACCCTCCAGACGGACTACATTTTGAAGATCCTTGGACTTGATGTATGTGCTGACACTCTAGTTGGAGATGCAATGCTTAGAGGTATCTCTGGTGGTCAAAAGAAGAGGTTGACAACAGCGGAGATGATCATTGGCCCCACAAAAGCTTTGTTCATGGATGAAATAACAAATGGCCTAGACAGTTCCACTGCATTCCAAATTGTTGCTTGTCTTCAGCAGCTGGTGCATATAACAGATTCTACTCTATTAGTTTCTCTTCTTCAGCCAGCACCCGAGGCGTTTGAGCTTTTTGATGACCTTATTCTAATGTCAGAAGGGAAGATTGTTTATCAGGGTCAACGGGATCATGTCTTGGAATTTTTTGAGGATTGTGGGTTTAAGTGTCCCGAGAGGAAAGGGGTTGCTGATTTCATCCAAGAGGTAATCTCTAAGAAAGATCAAGCACACTATTGGTACCGCACAGAACCTCATAATTATGTCTCAGTTGATATGTTCTCAAAAAAATTCAAGGCATCTTCTTTTGGGAAGAAGCTAGATGAGGATCTCATAGAGCCATTTGACAAGCTTCAAGACAACAACAATGCTCTTTCCTTTAGTGTGTATTCTCTTTCGAAATGGGAACTTTTTAGAGCTTGTTCATCAAGAGAACTCCTTCTCATGAAGAGGAATTCTTTTATCTACGTATTCAAGACAGTTCAGCTTATTATCATTGCACTTATCACCATGACTGTATTTCTGAGGAGTCGTATGGATATTGATGTACTTCATGCAAACTCCTACATGGGTTCCCTATTCTTTGCTCTTACCATACTTCTCGTGGATGGAATTCCTGAGATGTCTATGACACTTCAAAGACTAGAAGTTTTCTATAAGCAGAAAGACCTGTGCTTTTATCCAGCTTGGGCTTATGCCATTCCAGCAACACTACTGAAAGTACCTGTTTCATTTGTAGAAGCCCTTGCTTGGACTTCTCTTACTTACTATGTCATTGGATACAGTCCTGAGTTCCAAAGGTTCATCCTCCAGTTCATTCTACTTTTTGCCGTCCATTTAACATCTATATCCATGTTTCGCTTCCTTGCATCATTCTTTCAGACCATGGTTGCCACAATGACAGCTGGTAGTTTCGCAATATTGTTTCTGTTACTGTTCAGCGGATTCATTATCAAAAAACCTTCCATGCCTGGTTGGTTAGGGTGGGGATTTTGGCTTTCCCCTGTGACATATGGGGAGATAGGCCTCTCTGTGAACGAGTTTCTTTCTCCAAGATGGCAAACAATGCTATCAACAAATGTTACTGTCGGGCGTGAAACACTTAAAAGCCGTGGACTAAACTTTGATGGATATTTCTACTGGGTATCACTTGGTGCCTTATTTGGATTCACATTGATTTTCAACATAGGATTCATCTTGTCCTTGAGTTTCTTGAAGTCTCCAGGATCATCTCATGGTATAATTTCACATGAAAAACTTGCCCAAATTCAAAGAACTGACAATTCCCTTGATGATGCCCAAGTGAAAGAAAAGTCTAGAATTCATCCTTCTAAGACCACTGGAAAGATGGTCTTACCCTTTACTCCATTGACAGTGGTGTTCCAAGATGTGCAATACTATGTTATTCCTATGGAAACCAGGGAGCCGGGATTTAGTCAGAAGAAACTTCAACTTCTAAGTGACATTACTGGGGCATTTAGACCTGGTGTTCTTACAGCATTGATGGGCGTCAGCGGCGCTGGGAAAACTACTCTTCTTGATGTTCTTGCAGGAAGAAAGACTACTGGCTACATTGAAGGGGACATAAAAATTGGTGGATATCCCAAGGTTCAAGAAACATTTGCTAGGGTGTTGGGTTACTGTGAGCAAACCGATGTTCATTCTCCACAAATCACTGTAGAGGAGTCTTTGATGTTTTCTGCTTGGCTGCGCCTGGCTTCTCAGATCGACTCAAAAACAAAAACTGAGTTTGTCAATGAAGTCCTTGAGACCATTGAGCTTGATGGAATAAAAGATTCCTTGGTTGGAATACCTGGTGTTAGTGGTCTATCAAATGAGCAGCGTAAGCGGCTTACAATTGCTGTTGAGCTTGTTTCAAATCCCTCCATAATCTTCATGGATGAGCCTACAACTGGTTTGGATGCAAGAGCTGCTGCAATAGTCATGCGAGCAGTGAAGAATGTATCTGATACGGGAAGAACAATTGTTTGCACCATCCACCAACCGAATATTGATATATTTGAAGCATTTGATGAGCTAATTCTTTTGAAAACTGGAGGGCATATGATCTACTCAGGACAGGTGGGTCAGCACTCGAGTAGAGTTATCGAGTATTTTCAGAGTATTCCTGGGGTTCAAAAGATCAAAAGTAACTACAATCCAGCAACATGGATGTTAGACATCACTTCCACATCAGCTGAAGCTGAACTTGGTGTTAATTTTGCCCAAATATACAGAGAATCTAGTTTATATGAGAATAATATAGAGCTTGCAAGACAGTTGAGTACTCCACCTCATGGTTCCAGAGATCTGCATTTTGCTACCCGATTTTCGCAAAATGGCTGGATGCAGTTCAAATCTTGCTTATGGAAGCAGCACTTGTCTTATTGGAGGAGTCCGTCATACAACTTGATGCGCATCATGCATACGGTGGTAGCAGCTCTAATTTTTGGAGCATTGTATTGGAACCAGGGGAGGAAAATAACCGACCAGCAGAACTTATTCAATATACTTGGTTCTATGTATACCGGTGTCATCTTCTTGGGCATAAATAACTGCGCAACCGTTCTGCGATATGTTGAAACGGAGAGAACTGTCATGTATCGTGAAAAATTTGTGGGGATGTATTCACCATTGGCCTTTTCATTGGCACAGGTGGCGGTAGAAGTTCCCTATATATTGATCCAGGCAGTCATATTTATGATCATCACATATCCAATGATTGGATACTACGCTTCAGCATATAAGGTTTTCTGGTATTTCTATGCCATATTTTGTTCACTGCTATACTACAATTACATGGGAATGATGCTTGTCTCGTTGACACCAAACTTCATGGTAGCTGCAATTCTATCCTCAGTGTTCTACACATTGTATAACCTGTTTGCTGGTTTTCTGATTCCTAAGCCGCAAATTCCAAAATGGTGGATTTGGTTGTACTATCTGACTCCCTCATCTTGGTCACTAAACGGTTTGCTCACTTCACAATATGGAGACATAAACACGGAGATTATCATATTTGGGGAACCCAAAACAGTGTCTGCCTTCTTGAAAGACTACTTTGGGTTTCACCATGATCAGTTGGCTCTGGTAGCAGTAGTTCTCATTGCATTTCCCATAACTTTTGCATCAATTTTCGCCTACTGCATTGGGCGGTTGAACTTCCAGAAAAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006810 GO:0006855 GO:0007275 GO:0008150 GO:0009506 GO:0009719 GO:0009725 GO:0009733 GO:0009914 GO:0009926 GO:0009987 GO:0010033 GO:0010243 GO:0010817 GO:0014070 GO:0015399 GO:0015405 GO:0015893 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022622 GO:0022804 GO:0022857 GO:0030054 GO:0031224 GO:0032501 GO:0032502 GO:0032870 GO:0042221 GO:0042493 GO:0042623 GO:0042626 GO:0043492 GO:0044425 GO:0044464 GO:0048364 GO:0048731 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055044 GO:0055085 GO:0060918 GO:0065007 GO:0065008 GO:0070887 GO:0071229 GO:0071310 GO:0071365 GO:0071366 GO:0071407 GO:0071417 GO:0071495 GO:0071944 GO:0080026 GO:0099402 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane ABC_tran ABC_trans_N PDR_assoc

Protein Analysis

1493

Amino Acids

168.56

Weight (kDa)

8.52

Isoelectric Point (pI)

38.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_trans_N	PF14510	162 - 211	3.9e-06	ABC-transporter N-terminal
ABC_tran	PF00005	240 - 420	3.3e-17	ABC transporter
ABC2_membrane	PF01061	571 - 782	1.6e-44	ABC-2 type transporter
PDR_assoc	PF08370	787 - 849	2.5e-21	Plant PDR ABC transporter associated
ABC_tran	PF00005	920 - 1072	4.3e-21	ABC transporter
ABC2_membrane	PF01061	1218 - 1431	7.1e-57	ABC-2 type transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008205)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37280 AT2G37280 AT2G37280 AT2G37280 AT3G53480
fragaria_vesca	FvH4_6g08380 FvH4_6g08380 FvH4_6g08380
malus_domestica	MD04G1187600.v1.1
prunus_persica	Prupe.6G306100_v2.0.a1
pyrus_communis	pycom04g16590
rosa_chinensis	RchiOBHm_Chr3g0458321
rosa_laevigata	RLG00000025169
rosa_multiflora	Rmu_sc0007338.1_g000006
rosa_roxburghii	Rroxscaffold_6G00421170
rosa_rugosa	Rorug03G0025800 Rorug03G0025800 Rorug03G0025800
rosa_samantha	Rh3AG086600 Rh3BG089400 Rh3CG089800 Rh3DG090400
rosa_wichuraiana	Rw3G007350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	3387
Acc16I	TGCGCA	2 cut(s)	3719, 3862
Acc36I	ACCTGC	1 cut(s)	918
Acc65I	GGTACC	1 cut(s)	1542
AccB1I	GGYRCC	2 cut(s)	1542, 2456
AccB7I	CCANNNNNTGG	3 cut(s)	770, 3599, 4025
AccI	GTMKAC	1 cut(s)	3827
AclWI	GGATC	7 cut(s)	530, 1031, 1111, 1440, 1638, 2536, 3979
AcsI	RAATTY	8 cut(s)	1445, 1592, 1756, 1914, 2568, 2622, 3914, 4215
AcuI	CTGAAG	6 cut(s)	202, 875, 1286, 1334, 3522, 4023
AcyI	GRCGYC	1 cut(s)	2811
AdeI	CACNNNGTG	1 cut(s)	2456
AfaI	GTAC	5 cut(s)	1544, 1851, 2025, 3589, 4241
AfiI	CCNNNNNNNGG	8 cut(s)	770, 964, 1099, 2052, 3215, 3599, 4025, 4260
AgeI	ACCGGT	1 cut(s)	3830
AhdI	GACNNNNNGTC	1 cut(s)	178
AjuI	GAANNNNNNNTTGG	2 cut(s)	3495, 3527
Alw26I	GTCTC	7 cut(s)	322, 503, 1573, 2526, 3065, 4123, 4290
AlwI	GGATC	7 cut(s)	530, 1031, 1111, 1440, 1638, 2536, 3979
AlwNI	CAGNNNCTG	2 cut(s)	1309, 4343
Ama87I	CYCGRG	3 cut(s)	1361, 1475, 3397
AoxI	GGCC	5 cut(s)	690, 1222, 1261, 2326, 3939
ApeKI	GCWGC	8 cut(s)	1306, 3010, 3142, 3233, 3236, 3676, 3740, 4145
ApoI	RAATTY	8 cut(s)	1445, 1592, 1756, 1914, 2568, 2622, 3914, 4215
AsiGI	ACCGGT	1 cut(s)	3830
Asp700I	GAANNNNTTC	2 cut(s)	1740, 3803
Asp718I	GGTACC	1 cut(s)	1542
AspLEI	GCGC	4 cut(s)	2822, 3015, 3720, 3863
AspS9I	GGNCC	2 cut(s)	758, 1223
AsuC2I	CCSGG	1 cut(s)	2730
AsuHPI	GGTGA	8 cut(s)	386, 410, 571, 652, 845, 1801, 3924, 4364
AsuII	TTCGAA	2 cut(s)	677, 1700
AsuNHI	GCTAGC	1 cut(s)	859
AvaI	CYCGRG	3 cut(s)	1361, 1475, 3397
AvaII	GGWCC	1 cut(s)	758
BanI	GGYRCC	2 cut(s)	1542, 2456
BarI	GAAGNNNNNNTAC	2 cut(s)	2848, 2880
BauI	CACGAG	1 cut(s)	1904
BbsI	GAAGAC	4 cut(s)	445, 686, 782, 1292
BbvI	GCAGC	8 cut(s)	1318, 2997, 3154, 3220, 3223, 3688, 3752, 4132
BceAI	ACGGC	3 cut(s)	362, 2117, 2397
BciVI	GTATCC	2 cut(s)	2075, 4022
BclI	TGATCA	3 cut(s)	1215, 4005, 4378
BcnI	CCSGG	1 cut(s)	2730
BcoDI	GTCTC	7 cut(s)	322, 503, 1573, 2526, 3065, 4123, 4290
BfaI	CTAG	9 cut(s)	809, 860, 1148, 1265, 1622, 1946, 2619, 2928, 3546
BfmI	CTRYAG	1 cut(s)	2979
BfoI	RGCGCY	1 cut(s)	2823
BfuAI	ACCTGC	1 cut(s)	918
BfuI	GTATCC	2 cut(s)	2075, 4022
BglII	AGATCT	1 cut(s)	3610
BmcAI	AGTACT	1 cut(s)	3589
Bme18I	GGWCC	1 cut(s)	758
BmeRI	GACNNNNNGTC	1 cut(s)	178
BmeT110I	CYCGRG	3 cut(s)	1361, 1475, 3397
BmgT120I	GGNCC	2 cut(s)	758, 1223
BmiI	GGNNCC	9 cut(s)	760, 1225, 1544, 1876, 2458, 2727, 3604, 3770, 4329
BmrI	ACTGGG	2 cut(s)	2452, 2781
BmtI	GCTAGC	1 cut(s)	863
BmuI	ACTGGG	2 cut(s)	2452, 2781
BpiI	GAAGAC	4 cut(s)	445, 686, 782, 1292
BplI	GAGNNNNNCTC	2 cut(s)	1499, 1531
BpmI	CTGGAG	6 cut(s)	92, 229, 1079, 2096, 2508, 3378
Bpu10I	CCTNAGC	1 cut(s)	4206
Bpu14I	TTCGAA	2 cut(s)	677, 1700
BpuEI	CTTGAG	4 cut(s)	335, 806, 2527, 3089
BpuMI	CCSGG	1 cut(s)	2730
BsaAI	YACGTR	1 cut(s)	1771
BsaBI	GATNNNNATC	2 cut(s)	1629, 3719
BsaHI	GRCGYC	1 cut(s)	2811
BsaI	GGTCTC	1 cut(s)	3065
BsaWI	WCCGGW	1 cut(s)	3830
BsaXI	ACNNNNNCTCC	2 cut(s)	548, 578
Bsc4I	CCNNNNNNNGG	8 cut(s)	770, 964, 1099, 2052, 3215, 3599, 4025, 4260
Bse118I	RCCGGY	1 cut(s)	3830
Bse1I	ACTGG	9 cut(s)	109, 901, 2113, 2447, 2647, 2776, 2872, 3220, 3361
Bse3DI	GCAATG	3 cut(s)	1167, 1797, 4407
Bse8I	GATNNNNATC	2 cut(s)	1629, 3719
BseJI	GATNNNNATC	2 cut(s)	1629, 3719
BseLI	CCNNNNNNNGG	8 cut(s)	770, 964, 1099, 2052, 3215, 3599, 4025, 4260
BseMI	GCAATG	3 cut(s)	1167, 1797, 4407
BseNI	ACTGG	9 cut(s)	109, 901, 2113, 2447, 2647, 2776, 2872, 3220, 3361
BseRI	GAGGAG	4 cut(s)	95, 1843, 2999, 3709
BseXI	GCAGC	8 cut(s)	1318, 2997, 3154, 3220, 3223, 3688, 3752, 4132
BseYI	CCCAGC	1 cut(s)	2822
BsgI	GTGCAG	1 cut(s)	329
BshFI	GGCC	5 cut(s)	692, 1224, 1263, 2328, 3941
BshNI	GGYRCC	2 cut(s)	1542, 2456
BshTI	ACCGGT	1 cut(s)	3830
BsiHKCI	CYCGRG	3 cut(s)	1361, 1475, 3397
BsiSI	CCGG	2 cut(s)	2729, 3831
BslFI	GGGAC	4 cut(s)	116, 744, 1458, 2897
BslI	CCNNNNNNNGG	8 cut(s)	770, 964, 1099, 2052, 3215, 3599, 4025, 4260
BsmAI	GTCTC	7 cut(s)	322, 503, 1573, 2526, 3065, 4123, 4290
BsmBI	CGTCTC	1 cut(s)	503
BsmFI	GGGAC	4 cut(s)	116, 744, 1458, 2897
BsmI	GAATGC	1 cut(s)	1280
BsnI	GGCC	5 cut(s)	692, 1224, 1263, 2328, 3941
Bso31I	GGTCTC	1 cut(s)	3065
BsoBI	CYCGRG	3 cut(s)	1361, 1475, 3397
Bsp119I	TTCGAA	2 cut(s)	677, 1700
Bsp19I	CCATGG	1 cut(s)	2187
BspANI	GGCC	5 cut(s)	692, 1224, 1263, 2328, 3941
BspHI	TCATGA	1 cut(s)	1746
BspLI	GGNNCC	9 cut(s)	760, 1225, 1544, 1876, 2458, 2727, 3604, 3770, 4329
BspMI	ACCTGC	1 cut(s)	918
BspOI	GCTAGC	1 cut(s)	863
BspPI	GGATC	7 cut(s)	530, 1031, 1111, 1440, 1638, 2536, 3979
BspT104I	TTCGAA	2 cut(s)	677, 1700
BspT107I	GGYRCC	2 cut(s)	1542, 2456
BspTNI	GGTCTC	1 cut(s)	3065
BsrDI	GCAATG	3 cut(s)	1167, 1797, 4407
BsrFI	RCCGGY	1 cut(s)	3830
BsrI	ACTGG	9 cut(s)	109, 901, 2113, 2447, 2647, 2776, 2872, 3220, 3361
BssAI	RCCGGY	1 cut(s)	3830
BssNAI	GTATAC	1 cut(s)	3828
BssNI	GRCGYC	1 cut(s)	2811
BssSI	CACGAG	1 cut(s)	1904
BssT1I	CCWWGG	5 cut(s)	1075, 1120, 2187, 2907, 3102
Bst1107I	GTATAC	1 cut(s)	3828
Bst2BI	CACGAG	1 cut(s)	1904
Bst6I	CTCTTC	6 cut(s)	195, 662, 1187, 1350, 1745, 2841
BstACI	GRCGYC	1 cut(s)	2811
BstAPI	GCANNNNNTGC	3 cut(s)	1312, 2368, 3233
BstBAI	YACGTR	1 cut(s)	1771
BstBI	TTCGAA	2 cut(s)	677, 1700
BstC8I	GCNNGC	6 cut(s)	77, 861, 958, 1356, 3252, 3573
BstDSI	CCRYGG	2 cut(s)	2187, 2413
BstH2I	RGCGCY	1 cut(s)	2823
BstHHI	GCGC	4 cut(s)	2822, 3015, 3720, 3863
BstMAI	GTCTC	7 cut(s)	322, 503, 1573, 2526, 3065, 4123, 4290
BstNSI	RCATGY	1 cut(s)	452
BstSFI	CTRYAG	1 cut(s)	2979
BstSNI	TACGTA	1 cut(s)	1771
BstV1I	GCAGC	8 cut(s)	1318, 2997, 3154, 3220, 3223, 3688, 3752, 4132
BstV2I	GAAGAC	4 cut(s)	445, 686, 782, 1292
BstX2I	RGATCY	4 cut(s)	1036, 1116, 1630, 3610
BstXI	CCANNNNNNTGG	3 cut(s)	627, 3471, 4227
BstYI	RGATCY	4 cut(s)	1036, 1116, 1630, 3610
BstZ17I	GTATAC	1 cut(s)	3828
BsuI	GTATCC	2 cut(s)	2075, 4022
BsuRI	GGCC	5 cut(s)	692, 1224, 1263, 2328, 3941
BtgI	CCRYGG	2 cut(s)	2187, 2413
BtsI	GCAGTG	5 cut(s)	317, 594, 1275, 3261, 4082
BveI	ACCTGC	1 cut(s)	918
Cac8I	GCNNGC	6 cut(s)	77, 861, 958, 1356, 3252, 3573
CaiI	CAGNNNCTG	2 cut(s)	1309, 4343
CciI	TCATGA	1 cut(s)	1746
CfoI	GCGC	4 cut(s)	2822, 3015, 3720, 3863
Cfr10I	RCCGGY	1 cut(s)	3830
Cfr13I	GGNCC	2 cut(s)	758, 1223
CseI	GACGC	1 cut(s)	2800
CsiI	ACCWGGT	2 cut(s)	2785, 3115
Csp6I	GTAC	5 cut(s)	1543, 1850, 2024, 3588, 4240
CspAI	ACCGGT	1 cut(s)	3830
CviQI	GTAC	5 cut(s)	1543, 1850, 2024, 3588, 4240
DraI	TTTAAA	1 cut(s)	789
DraIII	CACNNNGTG	1 cut(s)	2456
DrdI	GACNNNNNNGTC	1 cut(s)	3387
DriI	GACNNNNNGTC	1 cut(s)	178
DseDI	GACNNNNNNGTC	1 cut(s)	3387
Eam1104I	CTCTTC	6 cut(s)	195, 662, 1187, 1350, 1745, 2841
Eam1105I	GACNNNNNGTC	1 cut(s)	178
EarI	CTCTTC	6 cut(s)	195, 662, 1187, 1350, 1745, 2841
Eco105I	TACGTA	1 cut(s)	1771
Eco130I	CCWWGG	5 cut(s)	1075, 1120, 2187, 2907, 3102
Eco147I	AGGCCT	1 cut(s)	2328
Eco31I	GGTCTC	1 cut(s)	3065
Eco32I	GATATC	1 cut(s)	2903
Eco47I	GGWCC	1 cut(s)	758
Eco57I	CTGAAG	6 cut(s)	202, 875, 1286, 1334, 3522, 4023
Eco88I	CYCGRG	3 cut(s)	1361, 1475, 3397
EcoRI	GAATTC	3 cut(s)	1756, 1914, 2622
EcoRV	GATATC	1 cut(s)	2903
EcoT14I	CCWWGG	5 cut(s)	1075, 1120, 2187, 2907, 3102
EcoT22I	ATGCAT	1 cut(s)	3729
ErhI	CCWWGG	5 cut(s)	1075, 1120, 2187, 2907, 3102
Esp3I	CGTCTC	1 cut(s)	503
FaqI	GGGAC	4 cut(s)	116, 744, 1458, 2897
FauI	CCCGC	2 cut(s)	402, 965
FauNDI	CATATG	2 cut(s)	2314, 3366
FbaI	TGATCA	3 cut(s)	1215, 4005, 4378
FblI	GTMKAC	1 cut(s)	3827
FspAI	RTGCGCAY	1 cut(s)	3719
FspBI	CTAG	9 cut(s)	809, 860, 1148, 1265, 1622, 1946, 2619, 2928, 3546
FspI	TGCGCA	2 cut(s)	3719, 3862
GlaI	GCGC	4 cut(s)	2821, 3014, 3719, 3862
GsaI	CCCAGC	1 cut(s)	2826
GsuI	CTGGAG	6 cut(s)	92, 229, 1079, 2096, 2508, 3378
HaeII	RGCGCY	1 cut(s)	2823
HaeIII	GGCC	5 cut(s)	692, 1224, 1263, 2328, 3941
HapII	CCGG	2 cut(s)	2729, 3831
HgaI	GACGC	1 cut(s)	2800
HhaI	GCGC	4 cut(s)	2822, 3015, 3720, 3863
Hin1I	GRCGYC	1 cut(s)	2811
Hin6I	GCGC	4 cut(s)	2820, 3013, 3718, 3861
HinP1I	GCGC	4 cut(s)	2820, 3013, 3718, 3861
HincII	GTYRAC	5 cut(s)	141, 744, 1200, 1427, 4125
HindII	GTYRAC	5 cut(s)	141, 744, 1200, 1427, 4125
HindIII	AAGCTT	4 cut(s)	214, 428, 1233, 1652
HpaI	GTTAAC	2 cut(s)	141, 744
HpaII	CCGG	2 cut(s)	2729, 3831
HphI	GGTGA	8 cut(s)	386, 410, 571, 652, 845, 1801, 3924, 4364
HpyCH4IV	ACGT	3 cut(s)	35, 884, 1770
HpySE526I	ACGT	3 cut(s)	35, 884, 1770
Hsp92I	GRCGYC	1 cut(s)	2811
HspAI	GCGC	4 cut(s)	2820, 3013, 3718, 3861
KpnI	GGTACC	1 cut(s)	1546
Ksp22I	TGATCA	3 cut(s)	1215, 4005, 4378
KspAI	GTTAAC	2 cut(s)	141, 744
LmnI	GCTCC	3 cut(s)	434, 2725, 3755
Lsp1109I	GCAGC	8 cut(s)	1318, 2997, 3154, 3220, 3223, 3688, 3752, 4132
MabI	ACCWGGT	2 cut(s)	2785, 3115
MaeI	CTAG	9 cut(s)	809, 860, 1148, 1265, 1622, 1946, 2619, 2928, 3546
MaeII	ACGT	3 cut(s)	35, 884, 1770
MaeIII	GTNAC	9 cut(s)	421, 838, 2232, 2308, 2383, 2762, 2939, 3452, 4263
MfeI	CAATTG	2 cut(s)	3159, 3285
MflI	RGATCY	4 cut(s)	1036, 1116, 1630, 3610
MlyI	GAGTC	7 cut(s)	188, 244, 1840, 2996, 3026, 3706, 4243
MmeI	TCCRAC	5 cut(s)	177, 514, 952, 1132, 3088
Mph1103I	ATGCAT	1 cut(s)	3729
MroXI	GAANNNNTTC	2 cut(s)	1740, 3803
MseI	TTAA	7 cut(s)	140, 743, 788, 1467, 2141, 2406, 3519
MslI	CAYNNNNRTG	3 cut(s)	1563, 4001, 4106
MspA1I	CMGCKG	7 cut(s)	960, 1208, 1309, 2207, 2244, 2817, 3500
MspI	CCGG	2 cut(s)	2729, 3831
MunI	CAATTG	2 cut(s)	3159, 3285
Mva1269I	GAATGC	1 cut(s)	1280
NciI	CCSGG	1 cut(s)	2730
NcoI	CCATGG	1 cut(s)	2187
NdeI	CATATG	2 cut(s)	2314, 3366
NheI	GCTAGC	1 cut(s)	859
NlaIV	GGNNCC	9 cut(s)	760, 1225, 1544, 1876, 2458, 2727, 3604, 3770, 4329
NmeAIII	GCCGAG	1 cut(s)	1004
NmuCI	GTSAC	3 cut(s)	2308, 2762, 4263
NsbI	TGCGCA	2 cut(s)	3719, 3862
NsiI	ATGCAT	1 cut(s)	3729
NspI	RCATGY	1 cut(s)	452
NspV	TTCGAA	2 cut(s)	677, 1700
PaeR7I	CTCGAG	1 cut(s)	3397
PagI	TCATGA	1 cut(s)	1746
PceI	AGGCCT	1 cut(s)	2328
PcsI	WCGNNNNNNNCGW	1 cut(s)	502
PctI	GAATGC	1 cut(s)	1280
PdmI	GAANNNNTTC	2 cut(s)	1740, 3803
PflMI	CCANNNNNTGG	3 cut(s)	770, 3599, 4025
PfoI	TCCNGGA	1 cut(s)	2524
PinAI	ACCGGT	1 cut(s)	3830
PleI	GAGTC	7 cut(s)	187, 243, 1839, 2995, 3026, 3705, 4243
PpsI	GAGTC	7 cut(s)	187, 243, 1839, 2995, 3026, 3705, 4243
Ppu21I	YACGTR	1 cut(s)	1771
PspFI	CCCAGC	1 cut(s)	2822
PspN4I	GGNNCC	9 cut(s)	760, 1225, 1544, 1876, 2458, 2727, 3604, 3770, 4329
PspPI	GGNCC	2 cut(s)	758, 1223
PspXI	VCTCGAGB	1 cut(s)	3397
PsrI	GAACNNNNNNTAC	2 cut(s)	4386, 4418
PstNI	CAGNNNCTG	2 cut(s)	1309, 4343
PsuI	RGATCY	4 cut(s)	1036, 1116, 1630, 3610
PvuII	CAGCTG	3 cut(s)	1309, 2207, 3500
RsaI	GTAC	5 cut(s)	1544, 1851, 2025, 3589, 4241
RsaNI	GTAC	5 cut(s)	1543, 1850, 2024, 3588, 4240
RseI	CAYNNNNRTG	3 cut(s)	1563, 4001, 4106
SaqAI	TTAA	7 cut(s)	140, 743, 788, 1467, 2141, 2406, 3519
Sau96I	GGNCC	2 cut(s)	758, 1223
ScaI	AGTACT	1 cut(s)	3589
SchI	GAGTC	7 cut(s)	188, 244, 1840, 2996, 3026, 3706, 4243
SexAI	ACCWGGT	2 cut(s)	2785, 3115
SfcI	CTRYAG	1 cut(s)	2979
Sfr274I	CTCGAG	1 cut(s)	3397
SfuI	TTCGAA	2 cut(s)	677, 1700
SinI	GGWCC	1 cut(s)	758
SlaI	CTCGAG	1 cut(s)	3397
SmiMI	CAYNNNNRTG	3 cut(s)	1563, 4001, 4106
SmlI	CTYRAG	5 cut(s)	350, 821, 2506, 3068, 3397
SmoI	CTYRAG	5 cut(s)	350, 821, 2506, 3068, 3397
SnaBI	TACGTA	1 cut(s)	1771
SseBI	AGGCCT	1 cut(s)	2328
SspI	AATATT	2 cut(s)	2223, 3313
SspMI	CTAG	9 cut(s)	809, 860, 1148, 1265, 1622, 1946, 2619, 2928, 3546
StuI	AGGCCT	1 cut(s)	2328
StyI	CCWWGG	5 cut(s)	1075, 1120, 2187, 2907, 3102
TaiI	ACGT	3 cut(s)	38, 887, 1773
TaqI	TCGA	7 cut(s)	253, 525, 677, 1700, 3030, 3398, 3411
TatI	WGTACW	3 cut(s)	1849, 3587, 4239
TauI	GCSGC	3 cut(s)	2820, 3154, 4213
Tru1I	TTAA	7 cut(s)	140, 743, 788, 1467, 2141, 2406, 3519
Tru9I	TTAA	7 cut(s)	140, 743, 788, 1467, 2141, 2406, 3519
TseFI	GTSAC	3 cut(s)	2308, 2762, 4263
TseI	GCWGC	8 cut(s)	1306, 3010, 3142, 3233, 3236, 3676, 3740, 4145
Tsp45I	GTSAC	3 cut(s)	2308, 2762, 4263
TspGWI	ACGGA	4 cut(s)	1115, 3690, 3902, 4322
Van91I	CCANNNNNTGG	3 cut(s)	770, 3599, 4025
VpaK11BI	GGWCC	1 cut(s)	758
XapI	RAATTY	8 cut(s)	1445, 1592, 1756, 1914, 2568, 2622, 3914, 4215
XbaI	TCTAGA	2 cut(s)	808, 2618
XceI	RCATGY	1 cut(s)	452
XcmI	CCANNNNNNNNNTGG	3 cut(s)	1903, 2647, 3196
XhoI	CTCGAG	1 cut(s)	3397
XmiI	GTMKAC	1 cut(s)	3827
XmnI	GAANNNNTTC	2 cut(s)	1740, 3803
XspI	CTAG	9 cut(s)	809, 860, 1148, 1265, 1622, 1946, 2619, 2928, 3546
ZrmI	AGTACT	1 cut(s)	3589
Zsp2I	ATGCAT	1 cut(s)	3729

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.