Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0008205

Physical Location & Seq

Genomic Coordinates Forward (+)

42688927 .. 42696012

Gene Structure 7086 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000025169

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4332 bp

ATGGCTCAGATGGTTGGCAGAGATGACATACAGTCGCTAAGAATTGAGTTGGAAGAGATAGGAAGAAGCTTTAGGTCATCGATTCAGAGTCGTAACTCCAGTTTCCGAGCCAATTCAGCATTGAGCTCTGCCAAAGATGACACTGATGCTCAATATGCTGTGCAGTGGGCAGCCATTGAGAGACTGCCAACGTTTGAAAGGCTCAAATCATCTTTGTTTGACAAGGGTGATGATGGAAATGAACTTGATGGTGAAGGAAAGCGGGTGGTTGATGTTACCAAGCTTGGAGCTATGGAAAAGCATGTCTTCATAGACAAGCTCATCAAGCACATTGAGAATGACAACCTTCGTCTCTTACGTAAAATCAGAAAAAGGATAGACAAGGTTGGAGTAAAGTTGCCCACTGTGGAGGTGACGTACAAGAATCTCAGTGTCGAAGCTGTGTGTGAGGTAGTTCATGGAAAGCCCCTCCCAACTCTCTGGAACTCTGTCAGAAGCACGCTTTCTCTCTTTGCCAAGTTTCTAGGTTCTAAGACACAAGAGGCCAAGATAAGCATTATTGAAGACTTTTGTGGTTCAATAAAGCCTGGAAGGTTAACTTTACTGCTTGGCCCCCCAGGATGTGGGAAGACCTCCTTTTTAAAGGCTCTATCAGGAAATCTGGAAAAATCGCTCAAGTTCTCTGGTGAAGTTACTTACAATGGACAGAAGCTAGCAGAGTTCGTCCCCCAGAAAACATCAGCTTATATAAGCCAATTCGACCTGCATATTCCTCAGATGACTGTCAGGGAAATACTTGATTTTTCAGCTCGCTGTCAGGGTATTGGAAGCCGATCTGATATTATGCTGGAAGTCAGTAAAAGGGAGAAGGAGGCAGGGATTATTCCACATCCAGATATAGATACTTACATGAAGGCAATTTCTCTCCAAGGACTGAAAAGAACCCTCCAGACGGACTACATTTTGAAGATCCTTGGACTTGATATATGTGCTGACACTCTAGTTGGAGATGCCATGCTAAGAGGTATATCTGGTGGTCAAAAGAAGAGGTTGACAACAGCGGAGATGATCATTGGTCCCACAAAAGCTTTGTTCATGGATGAGATAACAAATGGTCTAGACAGTTCCACTGCATTCCAAATTGTTGCTTGTCTTCAGCAGCTGGTGCATATAACAGATTCTACTTTACTAGTTTCTCTTCTTCAGCCAGCACCAGAGACGTTTGAGCTCTTTGATGACCTTATTTTAATGTCAGAAGGGAAGATTGTTTATCATGGTCCACGGGATCATGTCTTGGAGTTTTTTGAGGATTGTGGGTTCAAGTGTCCCGAGAGGAAAGGGGTTGCTGATTTCATCCAAGAGGTAATCTCTAAGAAAGATCAAGCACACTATTGGTACCGCACGGAACCTCACAATTATGTCTCAGTTGATATGTTCTCAAAAAAATTCATGGCATCTTCTTTTGGGAAGAAGCTAGATGAGGATCTCTTAGAGCCATTTGATAAGCTTCATGACAATAACAATGCTCTTTCCTTTAGTGTGTATTCTCTTTCTAAATGGGAACTTTTTAGAGCTTGTTCGTCAAGAGAACTTCTTCTCATGAAGAGGAATTCTTTTATCTATGTATTCAAGACAGTTCAGCTTATCATCATTGCATTTATCACCATGACTGTATTTGTGAGGACTCGTATGGATATTGATGTTCTTCATGCAAACTACTACATGGGTTCCCTATTCTTTGCTCTTACCATACTTCTCGTGGATGGAATTCCTGAGTTGTCTATGACACTTGAAAGACTAGAAGTTTTTTATAAGCAGAGAGACCTGTGTTTTTATCCAGCTTGGGCTTATGCAATTCCGGCAACACTACTGAAAGTACCTGTTTCATTTGTGGAAGCCCTGGTTTGGACTTCTCTTACGTACTATGTCATTGGATACAGTCCTGAGTTCCAAAGGTTCATCCTCCAGTTCTTTCTACTTTTTGCCGTTCATTTAACATCAATATCCATGTTTCGCTTCCTGGCATCATTCTTTCAGACCATGGTTGCCTCAATGACAGCCGCTAGTTTCGCAATATTGTTTCTGTTACTATTCAGCGGATTCATTATCAAAAAACCTTCCATGCCTGGTTGGTTAGAGTGGGGATTTTGGGTTTCCCCCATGACATATGGGGAGATAGGCCTCTCTGTGAACGAGTTTCTTTCTCCAAGATGGCAAACAATGCTATCAACGAACATTACTATCGGGCGTGAAACCCTTGAAAGCCATGGACTAAACTTTGATGGATATTTCTACTGGATATCACTTGGTGCCTTATTTGGATTCACAATGATTTTCAACATAGGATACATCTTGTCCTTGAGTTTCTTGAAGTCCCCCGGAACATCTCATGGTATCATATCACATGAAAAGCTTGCTCAAATTCAAAGAACTGATGACTCCCTCGATGATGCTCAAGTGAAAGAAAAATCTAGAATTCATCCTTCTAAAACCACTGGCAAGATGGTCTTACCCTTTACTCCATTGACACTGGTTTTCCAAGATGTGCAATACTATGTTATTCCTATGGAAACCAGGCAGCCGGGATTTAATCAGAAGAAACTTCAACTTCTAAGTGACATTACAGGGGCATTTAGACCTGGTGTTCTTACAGCATTGATGGGCGTCAGCGGTGCTGGGAAAACTACTCTTCTTGATGTTCTTGCAGGCAGAAAGACTACTGGCTGCATTGAAGGAGACATAAAGATTGGTGGATATCCCAAGGTTCAAGAAACATTTGCTAGGGTATTGGGTTACTGTGAGCAAACGGATGTTCATTCTCCACAAATCACTGTAGAAGAGTCTTTGATGTTTTCTGCTTGGCTGCGCCTGGCTTCTCAGATTAATTCAACGACAAAAACTGAGTTTGTCAATGAAGTCCTTGAGACCATTGAGCTTGATGGAATAAAAGATGCCTTGGTTGGAATACCTGGTGTTAGTGGTCTATCAAATGAGCAGCGTAAGCGGCTTACAATTGCTGTGGAGCTTGTTTCAAATCCCTCCATAATCTTCATGGATGAACCTACAACTGGTTTGGATGCAAGAGCTGCTGCAATAGTCATGCGAGCAGTGAAGAATGTAGCTGATACGGGAAGAACAATTGTTTGCACCATCCACCAACCGAATATTGATATATTTGAAGCATTTGATGAGCTAATTCTTTTGAAAACTGGAGGGCGTATGATCTACTCAGGACAGGTGGGTCAGCACTCGAGTAGAGTTATCGAATATTTTCAGAGTATTCCTGGCGTTCAAAAGATCAAAAGTAACTACAATCCAGCTACATGGATGTTAGACATCACTTCTACATCAGCTGAAGCTGAACATGGTGTTGATTTTGCCCAAATATACAGAGAATCTAGTTTATATGGGAATAATATAGAGCTTGCAAGACAGTTGAGTACTCCACCTCCTGGTTCCACAGATCTGCATTTTGCTACACGCTTTTCACAAAATGGCTGGATGCAGTTCAAATCTTGCCTATGGAAGCAGCACTTGTCTTATTGGAGGAGTCCGTCATATAACTTGATGCGCATCATGCATACGGTTGTATCATCTCTAATTTTTGGGACATTGTATTGGAACCAAGGGAGGAAAATAACCGACCAGCAGAACTTATTCAATATACTTGGTTCTATGTATACCGGTGTCATCTTCTTGGGCATAAATAACTGCGCAACTGTTCTGCAATATGTTGCCACAGAGAGAACTGTAATGTATCGCGAAAAATTTGTGGGGATGTATTCACCATTGGCCTTTTCAGTTGCACAGGTGGTGGTTGAACTTCCCTATATATTTATCCAGGCGGTCTTATTTATGATCATCACATATCCAATGATTGGGTATTATGCTTCAGCATATAAGGTTTTCTGGTACTTCTATGCCTTATTTTGTTCACTGCTATACTACAATTACATGGGAATGATGCTCGTTTCGTTGACACCAAACTTCATGGTAGCTGCAATTCTATCTTCAGTGTTCTACACAGTGTATAACCTGTTTGCTGGTTTTGTGATTCCTAAGCCACAAATTCCGAAATGGTGGATTTGGTTGTATTACCTGACTCCCTCATCTTGGTCACTAAACGGTTTGCTCACTTCACAATATGGAGACATAAACAAGGAGATTATGATATTTGGCGAACCCAAAACAGTGTCTGCCTTCTTGAAAGACTACTTTGGGTTTCACCATGATCAGTTGGCTCTGGTGGCACTAGTTCTCATTGCATTTCCCATAGCTTTTGCATCTATTTTCGCCTACTGTATCGGACGGTTGAACTTCCAGAGGAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006810 GO:0006855 GO:0007275 GO:0008150 GO:0009506 GO:0009719 GO:0009725 GO:0009733 GO:0009914 GO:0009926 GO:0009987 GO:0010033 GO:0010243 GO:0010817 GO:0014070 GO:0015399 GO:0015405 GO:0015893 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022622 GO:0022804 GO:0022857 GO:0030054 GO:0031224 GO:0032501 GO:0032502 GO:0032870 GO:0042221 GO:0042493 GO:0042623 GO:0042626 GO:0043492 GO:0044425 GO:0044464 GO:0048364 GO:0048731 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055044 GO:0055085 GO:0060918 GO:0065007 GO:0065008 GO:0070887 GO:0071229 GO:0071310 GO:0071365 GO:0071366 GO:0071407 GO:0071417 GO:0071495 GO:0071944 GO:0080026 GO:0099402 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane ABC_tran ABC_trans_N PDR_assoc

Protein Analysis

1444

Amino Acids

163.06

Weight (kDa)

7.74

Isoelectric Point (pI)

36.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_trans_N	PF14510	113 - 162	4.9e-06	ABC-transporter N-terminal
ABC_tran	PF00005	192 - 371	4.9e-18	ABC transporter
ABC2_membrane_7	PF19055	402 - 455	2.5e-06	ABC-2 type transporter
ABC2_membrane	PF01061	522 - 733	3.3e-45	ABC-2 type transporter
PDR_assoc	PF08370	738 - 800	2.7e-20	Plant PDR ABC transporter associated
ABC_tran	PF00005	871 - 1023	8.7e-21	ABC transporter
ABC2_membrane	PF01061	1169 - 1382	7.5e-57	ABC-2 type transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008205)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37280 AT2G37280 AT2G37280 AT2G37280 AT3G53480
fragaria_vesca	FvH4_6g08380 FvH4_6g08380 FvH4_6g08380
malus_domestica	MD04G1187600.v1.1
prunus_persica	Prupe.6G306100_v2.0.a1
pyrus_communis	pycom04g16590
rosa_chinensis	RchiOBHm_Chr3g0458321
rosa_laevigata	RLG00000025169
rosa_multiflora	Rmu_sc0007338.1_g000006
rosa_roxburghii	Rroxscaffold_6G00421170
rosa_rugosa	Rorug03G0025800 Rorug03G0025800 Rorug03G0025800
rosa_samantha	Rh3AG086600 Rh3BG089400 Rh3CG089800 Rh3DG090400
rosa_wichuraiana	Rw3G007350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1812
AasI	GACNNNNNNGTC	1 cut(s)	3240
Acc16I	TGCGCA	2 cut(s)	3572, 3715
Acc36I	ACCTGC	1 cut(s)	771
Acc65I	GGTACC	1 cut(s)	1395
AccB1I	GGYRCC	2 cut(s)	1395, 2309
AccB7I	CCANNNNNTGG	3 cut(s)	623, 3452, 3878
AccI	GTMKAC	1 cut(s)	3680
AccII	CGCG	1 cut(s)	3762
AciI	CCGC	8 cut(s)	262, 1061, 1399, 2061, 2097, 2670, 3004, 3845
AclI	AACGTT	1 cut(s)	191
AclWI	GGATC	3 cut(s)	964, 1293, 1491
AcsI	RAATTY	7 cut(s)	1445, 1609, 1767, 2421, 2475, 3767, 4068
AcuI	CTGAAG	5 cut(s)	1139, 1187, 3375, 3876, 3996
AcyI	GRCGYC	1 cut(s)	2664
AdeI	CACNNNGTG	1 cut(s)	2309
AfaI	GTAC	6 cut(s)	419, 1397, 1878, 1922, 3442, 3914
AfiI	CCNNNNNNNGG	7 cut(s)	623, 952, 1905, 3068, 3452, 3878, 4113
AgeI	ACCGGT	1 cut(s)	3683
AhdI	GACNNNNNGTC	1 cut(s)	31
AhlI	ACTAGT	2 cut(s)	1189, 4252
AloI	GAACNNNNNNTCC	2 cut(s)	1301, 1333
Alw21I	GWGCWC	2 cut(s)	128, 1230
Alw26I	GTCTC	8 cut(s)	175, 356, 1211, 1426, 1815, 2730, 2918, 4143
AlwI	GGATC	3 cut(s)	964, 1293, 1491
AlwNI	CAGNNNCTG	2 cut(s)	1162, 4196
Ama87I	CYCGRG	2 cut(s)	1328, 3250
AoxI	GGCC	4 cut(s)	543, 610, 2179, 3792
ApoI	RAATTY	7 cut(s)	1445, 1609, 1767, 2421, 2475, 3767, 4068
AseI	ATTAAT	1 cut(s)	2883
AsiGI	ACCGGT	1 cut(s)	3683
Asp700I	GAANNNNTTC	3 cut(s)	1593, 3270, 3656
Asp718I	GGTACC	1 cut(s)	1395
AspLEI	GCGC	3 cut(s)	2868, 3573, 3716
AspS9I	GGNCC	3 cut(s)	611, 1076, 1277
AsuC2I	CCSGG	2 cut(s)	2379, 2583
AsuHPI	GGTGA	7 cut(s)	239, 263, 424, 698, 1654, 3777, 4217
AsuNHI	GCTAGC	1 cut(s)	712
AvaI	CYCGRG	2 cut(s)	1328, 3250
AvaII	GGWCC	2 cut(s)	1076, 1277
BaeI	ACNNNNGTAYC	2 cut(s)	3573, 3606
BanI	GGYRCC	2 cut(s)	1395, 2309
BanII	GRGCYC	2 cut(s)	128, 1230
BauI	CACGAG	1 cut(s)	1757
BbsI	GAAGAC	4 cut(s)	298, 570, 635, 1145
Bbv12I	GWGCWC	2 cut(s)	128, 1230
BceAI	ACGGC	1 cut(s)	1970
BciVI	GTATCC	2 cut(s)	1928, 2339
BclI	TGATCA	3 cut(s)	1068, 3858, 4231
BcnI	CCSGG	2 cut(s)	2379, 2583
BcoDI	GTCTC	8 cut(s)	175, 356, 1211, 1426, 1815, 2730, 2918, 4143
BcuI	ACTAGT	2 cut(s)	1189, 4252
BfmI	CTRYAG	1 cut(s)	2832
BfuAI	ACCTGC	1 cut(s)	771
BfuI	GTATCC	2 cut(s)	1928, 2339
BglII	AGATCT	1 cut(s)	3463
BmcAI	AGTACT	1 cut(s)	3442
Bme18I	GGWCC	2 cut(s)	1076, 1277
BmeRI	GACNNNNNGTC	1 cut(s)	31
BmeT110I	CYCGRG	2 cut(s)	1328, 3250
BmgT120I	GGNCC	3 cut(s)	611, 1076, 1277
BmiI	GGNNCC	8 cut(s)	613, 1078, 1397, 1407, 1729, 2311, 3457, 3623
BmtI	GCTAGC	1 cut(s)	716
BpiI	GAAGAC	4 cut(s)	298, 570, 635, 1145
BplI	GAGNNNNNCTC	2 cut(s)	1352, 1384
BpmI	CTGGAG	4 cut(s)	82, 932, 1949, 3231
Bpu10I	CCTNAGC	1 cut(s)	4059
BpuEI	CTTGAG	4 cut(s)	659, 2380, 2439, 2942
BpuMI	CCSGG	2 cut(s)	2379, 2583
Bsa29I	ATCGAT	1 cut(s)	80
BsaAI	YACGTR	2 cut(s)	359, 1920
BsaBI	GATNNNNATC	2 cut(s)	1482, 3572
BsaHI	GRCGYC	1 cut(s)	2664
BsaI	GGTCTC	2 cut(s)	1815, 2918
BsaWI	WCCGGW	1 cut(s)	3683
BsaXI	ACNNNNNCTCC	4 cut(s)	401, 431, 3433, 3463
Bsc4I	CCNNNNNNNGG	7 cut(s)	623, 952, 1905, 3068, 3452, 3878, 4113
Bse118I	RCCGGY	1 cut(s)	3683
Bse1I	ACTGG	8 cut(s)	99, 1966, 2300, 2500, 2535, 2725, 3073, 3214
Bse3DI	GCAATG	2 cut(s)	1650, 4260
Bse8I	GATNNNNATC	2 cut(s)	1482, 3572
BseCI	ATCGAT	1 cut(s)	80
BseJI	GATNNNNATC	2 cut(s)	1482, 3572
BseLI	CCNNNNNNNGG	7 cut(s)	623, 952, 1905, 3068, 3452, 3878, 4113
BseMI	GCAATG	2 cut(s)	1650, 4260
BseMII	CTCAG	9 cut(s)	20, 442, 788, 1437, 1764, 1935, 2891, 2892, 3243
BseNI	ACTGG	8 cut(s)	99, 1966, 2300, 2500, 2535, 2725, 3073, 3214
BseRI	GAGGAG	1 cut(s)	3562
BseYI	CCCAGC	1 cut(s)	2675
BsgI	GTGCAG	1 cut(s)	182
Bsh1236I	CGCG	1 cut(s)	3762
BshFI	GGCC	4 cut(s)	545, 612, 2181, 3794
BshNI	GGYRCC	2 cut(s)	1395, 2309
BshTI	ACCGGT	1 cut(s)	3683
BshVI	ATCGAT	1 cut(s)	80
BsiHKAI	GWGCWC	2 cut(s)	128, 1230
BsiHKCI	CYCGRG	2 cut(s)	1328, 3250
BsiSI	CCGG	4 cut(s)	1859, 2379, 2582, 3684
BslFI	GGGAC	5 cut(s)	710, 1062, 1311, 2359, 3622
BslI	CCNNNNNNNGG	7 cut(s)	623, 952, 1905, 3068, 3452, 3878, 4113
BsmAI	GTCTC	8 cut(s)	175, 356, 1211, 1426, 1815, 2730, 2918, 4143
BsmBI	CGTCTC	2 cut(s)	356, 1211
BsmFI	GGGAC	5 cut(s)	710, 1062, 1311, 2359, 3622
BsmI	GAATGC	1 cut(s)	1133
BsnI	GGCC	4 cut(s)	545, 612, 2181, 3794
Bso31I	GGTCTC	2 cut(s)	1815, 2918
BsoBI	CYCGRG	2 cut(s)	1328, 3250
Bsp1286I	GDGCHC	2 cut(s)	128, 1230
Bsp19I	CCATGG	2 cut(s)	2040, 2266
Bsp68I	TCGCGA	1 cut(s)	3762
BspACI	CCGC	8 cut(s)	262, 1061, 1399, 2061, 2097, 2670, 3004, 3845
BspANI	GGCC	4 cut(s)	545, 612, 2181, 3794
BspCNI	CTCAG	9 cut(s)	19, 441, 787, 1436, 1765, 1936, 2890, 2893, 3242
BspDI	ATCGAT	1 cut(s)	80
BspFNI	CGCG	1 cut(s)	3762
BspHI	TCATGA	2 cut(s)	1510, 1599
BspLI	GGNNCC	8 cut(s)	613, 1078, 1397, 1407, 1729, 2311, 3457, 3623
BspMI	ACCTGC	1 cut(s)	771
BspOI	GCTAGC	1 cut(s)	716
BspPI	GGATC	3 cut(s)	964, 1293, 1491
BspT107I	GGYRCC	2 cut(s)	1395, 2309
BspTNI	GGTCTC	2 cut(s)	1815, 2918
BsrDI	GCAATG	2 cut(s)	1650, 4260
BsrFI	RCCGGY	1 cut(s)	3683
BsrI	ACTGG	8 cut(s)	99, 1966, 2300, 2500, 2535, 2725, 3073, 3214
BssAI	RCCGGY	1 cut(s)	3683
BssNAI	GTATAC	1 cut(s)	3681
BssNI	GRCGYC	1 cut(s)	2664
BssSI	CACGAG	1 cut(s)	1757
BssT1I	CCWWGG	7 cut(s)	928, 973, 2040, 2266, 2760, 2955, 3625
Bst1107I	GTATAC	1 cut(s)	3681
Bst2BI	CACGAG	1 cut(s)	1757
Bst6I	CTCTTC	6 cut(s)	48, 1040, 1203, 1598, 2694, 2832
BstACI	GRCGYC	1 cut(s)	2664
BstAPI	GCANNNNNTGC	3 cut(s)	1165, 2221, 3086
BstBAI	YACGTR	2 cut(s)	359, 1920
BstC8I	GCNNGC	8 cut(s)	500, 714, 811, 1209, 2415, 2707, 3105, 3426
BstDSI	CCRYGG	3 cut(s)	1280, 2040, 2266
BstFNI	CGCG	1 cut(s)	3762
BstHHI	GCGC	3 cut(s)	2868, 3573, 3716
BstMAI	GTCTC	8 cut(s)	175, 356, 1211, 1426, 1815, 2730, 2918, 4143
BstNSI	RCATGY	1 cut(s)	305
BstSFI	CTRYAG	1 cut(s)	2832
BstSNI	TACGTA	2 cut(s)	359, 1920
BstUI	CGCG	1 cut(s)	3762
BstV2I	GAAGAC	4 cut(s)	298, 570, 635, 1145
BstX2I	RGATCY	3 cut(s)	969, 1483, 3463
BstXI	CCANNNNNNTGG	2 cut(s)	480, 3324
BstYI	RGATCY	3 cut(s)	969, 1483, 3463
BstZ17I	GTATAC	1 cut(s)	3681
Bsu15I	ATCGAT	1 cut(s)	80
BsuI	GTATCC	2 cut(s)	1928, 2339
BsuRI	GGCC	4 cut(s)	545, 612, 2181, 3794
BsuTUI	ATCGAT	1 cut(s)	80
BtgI	CCRYGG	3 cut(s)	1280, 2040, 2266
BtsI	GCAGTG	4 cut(s)	170, 1128, 3114, 3935
BtuMI	TCGCGA	1 cut(s)	3762
BveI	ACCTGC	1 cut(s)	771
Cac8I	GCNNGC	8 cut(s)	500, 714, 811, 1209, 2415, 2707, 3105, 3426
CaiI	CAGNNNCTG	2 cut(s)	1162, 4196
CciI	TCATGA	2 cut(s)	1510, 1599
CfoI	GCGC	3 cut(s)	2868, 3573, 3716
Cfr10I	RCCGGY	1 cut(s)	3683
Cfr13I	GGNCC	3 cut(s)	611, 1076, 1277
ClaI	ATCGAT	1 cut(s)	80
CseI	GACGC	1 cut(s)	2653
CsiI	ACCWGGT	2 cut(s)	2638, 2968
Csp6I	GTAC	6 cut(s)	418, 1396, 1877, 1921, 3441, 3913
CspAI	ACCGGT	1 cut(s)	3683
CspCI	CAANNNNNGTGG	2 cut(s)	3000, 3035
CviQI	GTAC	6 cut(s)	418, 1396, 1877, 1921, 3441, 3913
DraI	TTTAAA	1 cut(s)	642
DraIII	CACNNNGTG	1 cut(s)	2309
DrdI	GACNNNNNNGTC	1 cut(s)	3240
DriI	GACNNNNNGTC	1 cut(s)	31
DseDI	GACNNNNNNGTC	1 cut(s)	3240
Eam1104I	CTCTTC	6 cut(s)	48, 1040, 1203, 1598, 2694, 2832
Eam1105I	GACNNNNNGTC	1 cut(s)	31
EarI	CTCTTC	6 cut(s)	48, 1040, 1203, 1598, 2694, 2832
Ecl136II	GAGCTC	2 cut(s)	126, 1228
Eco105I	TACGTA	2 cut(s)	359, 1920
Eco130I	CCWWGG	7 cut(s)	928, 973, 2040, 2266, 2760, 2955, 3625
Eco147I	AGGCCT	1 cut(s)	2181
Eco24I	GRGCYC	2 cut(s)	128, 1230
Eco31I	GGTCTC	2 cut(s)	1815, 2918
Eco32I	GATATC	2 cut(s)	2301, 2756
Eco47I	GGWCC	2 cut(s)	1076, 1277
Eco53kI	GAGCTC	2 cut(s)	126, 1228
Eco57I	CTGAAG	5 cut(s)	1139, 1187, 3375, 3876, 3996
Eco88I	CYCGRG	2 cut(s)	1328, 3250
EcoICRI	GAGCTC	2 cut(s)	126, 1228
EcoRI	GAATTC	3 cut(s)	1609, 1767, 2475
EcoRV	GATATC	2 cut(s)	2301, 2756
EcoT14I	CCWWGG	7 cut(s)	928, 973, 2040, 2266, 2760, 2955, 3625
EcoT22I	ATGCAT	1 cut(s)	3582
EcoT38I	GRGCYC	2 cut(s)	128, 1230
ErhI	CCWWGG	7 cut(s)	928, 973, 2040, 2266, 2760, 2955, 3625
Esp3I	CGTCTC	2 cut(s)	356, 1211
FaqI	GGGAC	5 cut(s)	710, 1062, 1311, 2359, 3622
FauI	CCCGC	1 cut(s)	255
FauNDI	CATATG	1 cut(s)	2167
FbaI	TGATCA	3 cut(s)	1068, 3858, 4231
FblI	GTMKAC	1 cut(s)	3680
FriOI	GRGCYC	2 cut(s)	128, 1230
FspAI	RTGCGCAY	1 cut(s)	3572
FspI	TGCGCA	2 cut(s)	3572, 3715
GlaI	GCGC	3 cut(s)	2867, 3572, 3715
GsaI	CCCAGC	1 cut(s)	2679
GsuI	CTGGAG	4 cut(s)	82, 932, 1949, 3231
HaeIII	GGCC	4 cut(s)	545, 612, 2181, 3794
HapII	CCGG	4 cut(s)	1859, 2379, 2582, 3684
HgaI	GACGC	1 cut(s)	2653
HhaI	GCGC	3 cut(s)	2868, 3573, 3716
Hin1I	GRCGYC	1 cut(s)	2664
Hin6I	GCGC	3 cut(s)	2866, 3571, 3714
HinP1I	GCGC	3 cut(s)	2866, 3571, 3714
HincII	GTYRAC	3 cut(s)	597, 1053, 3978
HindII	GTYRAC	3 cut(s)	597, 1053, 3978
HindIII	AAGCTT	5 cut(s)	67, 281, 1086, 1505, 2411
HpaI	GTTAAC	1 cut(s)	597
HpaII	CCGG	4 cut(s)	1859, 2379, 2582, 3684
HphI	GGTGA	7 cut(s)	239, 263, 424, 698, 1654, 3777, 4217
Hpy166II	GTNNAC	7 cut(s)	597, 1053, 1280, 2191, 3681, 3935, 3978
Hpy8I	GTNNAC	7 cut(s)	597, 1053, 1280, 2191, 3681, 3935, 3978
HpyCH4IV	ACGT	5 cut(s)	191, 358, 416, 1220, 1919
HpySE526I	ACGT	5 cut(s)	191, 358, 416, 1220, 1919
Hsp92I	GRCGYC	1 cut(s)	2664
HspAI	GCGC	3 cut(s)	2866, 3571, 3714
KpnI	GGTACC	1 cut(s)	1399
Ksp22I	TGATCA	3 cut(s)	1068, 3858, 4231
KspAI	GTTAAC	1 cut(s)	597
LmnI	GCTCC	2 cut(s)	287, 3022
MabI	ACCWGGT	2 cut(s)	2638, 2968
MaeII	ACGT	5 cut(s)	191, 358, 416, 1220, 1919
MaeIII	GTNAC	9 cut(s)	92, 274, 412, 691, 2085, 2615, 2792, 3305, 4116
MfeI	CAATTG	2 cut(s)	3012, 3138
MflI	RGATCY	3 cut(s)	969, 1483, 3463
MhlI	GDGCHC	2 cut(s)	128, 1230
MlyI	GAGTC	6 cut(s)	97, 1678, 2432, 2849, 3559, 4096
MmeI	TCCRAC	4 cut(s)	30, 367, 985, 2941
Mph1103I	ATGCAT	1 cut(s)	3582
MroXI	GAANNNNTTC	3 cut(s)	1593, 3270, 3656
MseI	TTAA	6 cut(s)	596, 641, 1247, 1994, 2589, 2883
MslI	CAYNNNNRTG	2 cut(s)	1416, 3959
MspA1I	CMGCKG	5 cut(s)	1061, 1162, 2097, 2670, 3353
MspI	CCGG	4 cut(s)	1859, 2379, 2582, 3684
MunI	CAATTG	2 cut(s)	3012, 3138
Mva1269I	GAATGC	1 cut(s)	1133
MvnI	CGCG	1 cut(s)	3762
NciI	CCSGG	2 cut(s)	2379, 2583
NcoI	CCATGG	2 cut(s)	2040, 2266
NdeI	CATATG	1 cut(s)	2167
NheI	GCTAGC	1 cut(s)	712
NlaIV	GGNNCC	8 cut(s)	613, 1078, 1397, 1407, 1729, 2311, 3457, 3623
NmuCI	GTSAC	3 cut(s)	412, 2615, 4116
NruI	TCGCGA	1 cut(s)	3762
NsbI	TGCGCA	2 cut(s)	3572, 3715
NsiI	ATGCAT	1 cut(s)	3582
NspI	RCATGY	1 cut(s)	305
PaeR7I	CTCGAG	1 cut(s)	3250
PagI	TCATGA	2 cut(s)	1510, 1599
PceI	AGGCCT	1 cut(s)	2181
PcsI	WCGNNNNNNNCGW	1 cut(s)	355
PctI	GAATGC	1 cut(s)	1133
PdmI	GAANNNNTTC	3 cut(s)	1593, 3270, 3656
PfeI	GAWTC	7 cut(s)	82, 424, 1178, 2100, 2322, 3395, 4054
PflMI	CCANNNNNTGG	3 cut(s)	623, 3452, 3878
PinAI	ACCGGT	1 cut(s)	3683
PleI	GAGTC	6 cut(s)	96, 1678, 2432, 2848, 3558, 4096
PpsI	GAGTC	6 cut(s)	96, 1678, 2432, 2848, 3558, 4096
Ppu21I	YACGTR	2 cut(s)	359, 1920
PshBI	ATTAAT	1 cut(s)	2883
PsiI	TTATAA	1 cut(s)	1812
Psp124BI	GAGCTC	2 cut(s)	128, 1230
Psp1406I	AACGTT	1 cut(s)	191
PspFI	CCCAGC	1 cut(s)	2675
PspN4I	GGNNCC	8 cut(s)	613, 1078, 1397, 1407, 1729, 2311, 3457, 3623
PspPI	GGNCC	3 cut(s)	611, 1076, 1277
PspXI	VCTCGAGB	1 cut(s)	3250
PstNI	CAGNNNCTG	2 cut(s)	1162, 4196
PsuI	RGATCY	3 cut(s)	969, 1483, 3463
PvuII	CAGCTG	2 cut(s)	1162, 3353
RruI	TCGCGA	1 cut(s)	3762
RsaI	GTAC	6 cut(s)	419, 1397, 1878, 1922, 3442, 3914
RsaNI	GTAC	6 cut(s)	418, 1396, 1877, 1921, 3441, 3913
RseI	CAYNNNNRTG	2 cut(s)	1416, 3959
SacI	GAGCTC	2 cut(s)	128, 1230
SaqAI	TTAA	6 cut(s)	596, 641, 1247, 1994, 2589, 2883
Sau96I	GGNCC	3 cut(s)	611, 1076, 1277
ScaI	AGTACT	1 cut(s)	3442
SchI	GAGTC	6 cut(s)	97, 1678, 2432, 2849, 3559, 4096
SduI	GDGCHC	2 cut(s)	128, 1230
SexAI	ACCWGGT	2 cut(s)	2638, 2968
SfcI	CTRYAG	1 cut(s)	2832
Sfr274I	CTCGAG	1 cut(s)	3250
SinI	GGWCC	2 cut(s)	1076, 1277
SlaI	CTCGAG	1 cut(s)	3250
SmiMI	CAYNNNNRTG	2 cut(s)	1416, 3959
SmlI	CTYRAG	5 cut(s)	674, 2359, 2454, 2921, 3250
SmoI	CTYRAG	5 cut(s)	674, 2359, 2454, 2921, 3250
SnaBI	TACGTA	2 cut(s)	359, 1920
SpeI	ACTAGT	2 cut(s)	1189, 4252
SseBI	AGGCCT	1 cut(s)	2181
SsiI	CCGC	8 cut(s)	262, 1061, 1399, 2061, 2097, 2670, 3004, 3845
SspI	AATATT	3 cut(s)	2076, 3166, 3269
SstI	GAGCTC	2 cut(s)	128, 1230
StuI	AGGCCT	1 cut(s)	2181
StyI	CCWWGG	7 cut(s)	928, 973, 2040, 2266, 2760, 2955, 3625
TaiI	ACGT	5 cut(s)	194, 361, 419, 1223, 1922
TaqI	TCGA	6 cut(s)	80, 435, 759, 2445, 3251, 3264
TatI	WGTACW	1 cut(s)	3440
TauI	GCSGC	2 cut(s)	2063, 3007
TfiI	GAWTC	7 cut(s)	82, 424, 1178, 2100, 2322, 3395, 4054
Tru1I	TTAA	6 cut(s)	596, 641, 1247, 1994, 2589, 2883
Tru9I	TTAA	6 cut(s)	596, 641, 1247, 1994, 2589, 2883
TseFI	GTSAC	3 cut(s)	412, 2615, 4116
Tsp45I	GTSAC	3 cut(s)	412, 2615, 4116
TspGWI	ACGGA	4 cut(s)	968, 1418, 2822, 3543
Van91I	CCANNNNNTGG	3 cut(s)	623, 3452, 3878
VpaK11BI	GGWCC	2 cut(s)	1076, 1277
VspI	ATTAAT	1 cut(s)	2883
XapI	RAATTY	7 cut(s)	1445, 1609, 1767, 2421, 2475, 3767, 4068
XbaI	TCTAGA	2 cut(s)	1117, 2471
XceI	RCATGY	1 cut(s)	305
XcmI	CCANNNNNNNNNTGG	3 cut(s)	1756, 2500, 3049
XhoI	CTCGAG	1 cut(s)	3250
XmiI	GTMKAC	1 cut(s)	3680
XmnI	GAANNNNTTC	3 cut(s)	1593, 3270, 3656
ZrmI	AGTACT	1 cut(s)	3442
Zsp2I	ATGCAT	1 cut(s)	3582

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.