AT3G54350

domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0005427
Physical Location & Seq
Reverse (-)
20122017 .. 20126981
4965 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G54350.4

Sequence Viewer

Length: 2109 bp
ATGGGGGCTCTTGCTCAAGTTGTTCCGTGGATACCCGAAGACGACCTGCTGCTAAAGAATGCTGTCGAGGCTGGTGCTTCTTTGGAATCGCTTGCTAAAGGTGCTGTGCAGTTTTCTAGAAGATTTTCTATTAGAGAATTGCAAGATCGATGGCATGCACTGCTTTATGATCCAGTAGTTTCTGTAGAGGCGGCTTTTCGGATGGCTGAGCTTGAACGTACTAACCCTAATTTTCCTACTAAGTTTGGTAGAACTGGATATTCAAAAGAAAACAAAAGTTCATCTAGGAAGAGGAATGCTGAAAGGCTCAGAAGTACTTATCATTCCTTGCGGAAGAAATTTAGGACTGAGCCATTCAATTCCTTGGATCTAGGTTTCCTCGTTCCACCAAATGATAGCCATTTCATGGATAATGGTGATGCAACACATCTTGGTCTTGAGGACTCTCACATGGATATTATCCACAACGCGTTTCCAGAAATCTTGGCTGAAGGTGGTTGCGTGACAACTCATGTTCTGCCAGAAGATAATTTACAGGGAGACATTCCTTACGTAGAAGGAGAAAATCTCACATTCACTGAACACGCAGGTCTATCAGTATGTGATGTGGTTCATCAAGATTCCGAGCAGAAACTAGAGAATACTGCTCACGAGGCAAAAAACACAATGGCTAGCACTGATTTCCTGGCACAGCTTTCAACTTCTCTTTTCGAAGAAGACATGGAACCGTTCATGGAAGTAGATGGCAAAGAAGTTGACAAGTCATATTATGATGGTCTTAGCTCACTGTTGGTGAACTCTACAAATGATACAAACCGCGAGGCTTTTCCTAACCCCACCGAGCAAGAACCTTCCATTGCACCAACTCATCCAGGAGAGGCAACCCTGGATGATCATGTGATGCTTGAGCTAGATGGTACAATCGCTTTAGATCCTCATCCTGAGATTGTTGGGGGTGTAATCTGCTGTTTATTAAACGAAGAGGATCCTGATATTCCGTGTAATGATGACATTTTCCTGTCCAACAACTCCCGTCCGATGTCAGTTTCTTCTTTAGCCCGGCGGAACTTTAAGGATACCAATAGTCCAATAACTACATGTGTAAGAGACGTCTCCGCCAGTAAGGAAAAAAGTGAGGGATATTCACTCCAGGCTCAAAAGAAAAAACCAGGACGTTTACAGGGGTCTACTCAAGGAAAGCCAGAGATGGGCCAACCAAGTAAAGGTAGCAAATTCAGGGCATCGACTAGTACTGAGTTAAAGAATACTGTAGCTCCTGGTGGTTCTTCCTCTGCACAGGCTTGCTCTAATACTCTACTTTCTACTGGTACCGGTGCAAAAGATGGAAAGAAAGAAACTGCTACTGGAACACTCTTTGTCGGATCTGATGGCCATGGCAACCACCCAGAGAAGGATAGTGAAAATTGTAAAGAGAAAAATGTTGTACCACCTGTTAATGAATCGCCACATGCTAAAGATACTGATGATGGCTTGATAGAGATTACAGTCCCTGAGCTGGAGATCACCCGTGCAGAAGCAGAAGCAGAAGCAGAAGCGCATGTTTGTGAGAGTGATGAGGACTTACCCAATTATTCTGACATTGAGGCTATGATACTTGACATGGACTTGGAACCTGATGATCAAGATAATTTTGATCTCGAAGTCTCCAAGTATCAGAGCCAAGACATGAAAAGAACAATCATAAGACTTGAGCAGGCTGCTCATTCATATATGCAAAGAGCCATTGCTTCCCGTGGTGCATTCGCTGTTTTATATGGCAGATATTCAAAACACTATATCAAGAAGCCTGAGGTTTTGGTGGGTAGATCAACAGAAGACCTCGCTGTGGACATTGATTTGGGAAGAGAAAAGCGGGGTAGCAAAATATCTCGACGACAGGCGATCATACGGCTGGGTGATGACGGTTCGTTTCATATAAAAAACCTGGGGAAGTATTCAATCTCAGTAAATGAGAAGGAAGTAGATCCTGGACAGAGTTTAATCCTCAAATCCGATTGTCTAGTTGAGATACGGGGAATGCCTTTTATATTTGAAACAAACCAAAGTTGCATGCAAGAGTACCTGAAGAGAAGAGGGAAAGTGAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000123 GO:0000228 GO:0000785 GO:0000790 GO:0002151 GO:0003674 GO:0003676 GO:0003723 GO:0003727 GO:0004857 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005730 GO:0005737 GO:0005783 GO:0005844 GO:0006325 GO:0006464 GO:0006473 GO:0006475 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008187 GO:0008266 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010521 GO:0010556 GO:0010558 GO:0010605 GO:0010639 GO:0012505 GO:0016043 GO:0016569 GO:0016570 GO:0016573 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019219 GO:0019222 GO:0019538 GO:0030234 GO:0030425 GO:0031011 GO:0031248 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0032204 GO:0032205 GO:0032879 GO:0032880 GO:0032991 GO:0033043 GO:0033044 GO:0033202 GO:0034046 GO:0034708 GO:0035097 GO:0036211 GO:0036477 GO:0042995 GO:0043005 GO:0043025 GO:0043086 GO:0043170 GO:0043204 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043543 GO:0043967 GO:0043981 GO:0043982 GO:0043984 GO:0044092 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044297 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044454 GO:0044463 GO:0044464 GO:0044665 GO:0045934 GO:0048518 GO:0048519 GO:0048523 GO:0050789 GO:0050790 GO:0050794 GO:0051052 GO:0051053 GO:0051128 GO:0051129 GO:0051171 GO:0051172 GO:0051276 GO:0051338 GO:0051348 GO:0051972 GO:0051974 GO:0060255 GO:0060341 GO:0065007 GO:0065008 GO:0065009 GO:0070013 GO:0070603 GO:0070717 GO:0071339 GO:0071704 GO:0071840 GO:0080090 GO:0097159 GO:0097346 GO:0097447 GO:0097458 GO:0098772 GO:0120025 GO:0120038 GO:1900180 GO:1900182 GO:1901363 GO:1901564 GO:1902493 GO:1902494 GO:1903827 GO:1903829 GO:1904356 GO:1904357 GO:1904749 GO:1904751 GO:1904949 GO:1990234 GO:1990904 GO:2000112 GO:2000113 GO:2000278 GO:2000279 GO:2001251
KEGG Pathways
Metabolic & Signaling
ko05168 map05168
Pfam Domains
Protein Families
FHA MCRS_N

Protein Analysis

702

Amino Acids

77.59

Weight (kDa)

4.96

Isoelectric Point (pI)

45.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MCRS_N PF13325 10 - 73 2.1e-14 N-terminal region of micro-spherule protein
FHA PF00498 606 - 677 8.2e-08 FHA domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1113
Acc36I ACCTGC 2 cut(s) 54, 578
Acc65I GGTACC 1 cut(s) 1328
AccB1I GGYRCC 1 cut(s) 1328
AccB7I CCANNNNNTGG 1 cut(s) 406
AccI GTMKAC 1 cut(s) 1187
AccII CGCG 2 cut(s) 470, 819
AciI CCGC 6 cut(s) 191, 331, 817, 1063, 1116, 1873
AclWI GGATC 7 cut(s) 164, 375, 926, 980, 993, 1390, 1979
AcoI YGGCCR 1 cut(s) 1390
AcsI RAATTY 2 cut(s) 338, 1232
AcuI CTGAAG 2 cut(s) 510, 2105
AcyI GRCGYC 1 cut(s) 1110
AfaI GTAC 7 cut(s) 220, 316, 919, 1252, 1330, 1446, 2081
AfiI CCNNNNNNNGG 6 cut(s) 406, 1208, 1223, 1411, 1516, 1846
AflIII ACRYGT 2 cut(s) 468, 1097
AgeI ACCGGT 1 cut(s) 1331
AgsI TTSAA 7 cut(s) 215, 264, 358, 699, 1788, 1959, 2054
AhlI ACTAGT 1 cut(s) 1247
AjnI CCWGG 8 cut(s) 684, 871, 885, 1149, 1168, 1276, 1944, 1987
AluBI AGCT 6 cut(s) 211, 694, 783, 910, 1274, 1516
AluI AGCT 6 cut(s) 211, 694, 783, 910, 1274, 1516
Alw26I GTCTC 4 cut(s) 534, 1101, 1117, 1669
AlwI GGATC 7 cut(s) 164, 375, 926, 980, 993, 1390, 1979
AlwNI CAGNNNCTG 1 cut(s) 1511
AoxI GGCC 2 cut(s) 1210, 1390
ApeKI GCWGC 2 cut(s) 49, 1718
ApoI RAATTY 2 cut(s) 338, 1232
AsiGI ACCGGT 1 cut(s) 1331
Asp700I GAANNNNTTC 1 cut(s) 124
Asp718I GGTACC 1 cut(s) 1328
AspLEI GCGC 1 cut(s) 1558
AspS9I GGNCC 1 cut(s) 1210
AsuC2I CCSGG 1 cut(s) 1060
AsuHPI GGTGA 4 cut(s) 428, 805, 1516, 1928
AsuII TTCGAA 1 cut(s) 711
AsuNHI GCTAGC 1 cut(s) 671
AxyI CCTNAGG 1 cut(s) 1809
BalI TGGCCA 1 cut(s) 1392
BamHI GGATCC 1 cut(s) 985
BanI GGYRCC 1 cut(s) 1328
BanII GRGCYC 1 cut(s) 10
BarI GAAGNNNNNNTAC 2 cut(s) 516, 548
BauI CACGAG 1 cut(s) 650
BbsI GAAGAC 3 cut(s) 45, 723, 1842
BbvI GCAGC 2 cut(s) 36, 1705
BccI CCATC 9 cut(s) 144, 196, 737, 767, 908, 1201, 1337, 1382, 1481
BceAI ACGGC 1 cut(s) 1925
BcgI CGANNNNNNTGC 2 cut(s) 56, 90
BciT130I CCWGG 8 cut(s) 686, 873, 887, 1151, 1170, 1278, 1946, 1989
BciVI GTATCC 2 cut(s) 24, 1069
BclI TGATCA 2 cut(s) 892, 1639
BcnI CCSGG 1 cut(s) 1060
BcoDI GTCTC 4 cut(s) 534, 1101, 1117, 1669
BcuI ACTAGT 1 cut(s) 1247
BfaI CTAG 8 cut(s) 117, 285, 371, 635, 672, 911, 1248, 2021
BfmI CTRYAG 2 cut(s) 183, 1269
BfuAI ACCTGC 2 cut(s) 54, 578
BfuI GTATCC 2 cut(s) 24, 1069
BisI GCNGC 3 cut(s) 50, 192, 1719
BlpI GCTNAGC 1 cut(s) 207
BlsI GCNGC 3 cut(s) 51, 193, 1720
BmcAI AGTACT 2 cut(s) 316, 1252
Bme1390I CCNGG 9 cut(s) 686, 873, 887, 1060, 1151, 1170, 1278, 1946, 1989
BmgT120I GGNCC 1 cut(s) 1210
BmiI GGNNCC 4 cut(s) 726, 987, 1330, 1632
BmrFI CCNGG 9 cut(s) 686, 873, 887, 1060, 1151, 1170, 1278, 1946, 1989
BmsI GCATC 3 cut(s) 409, 891, 1250
BmtI GCTAGC 1 cut(s) 675
BpiI GAAGAC 3 cut(s) 45, 723, 1842
BplI GAGNNNNNCTC 2 cut(s) 552, 584
BpmI CTGGAG 2 cut(s) 1133, 1538
Bpu10I CCTNAGC 1 cut(s) 1512
Bpu1102I GCTNAGC 1 cut(s) 207
Bpu14I TTCGAA 1 cut(s) 711
BpuEI CTTGAG 4 cut(s) 458, 926, 1176, 1730
BpuMI CCSGG 1 cut(s) 1060
Bsa29I ATCGAT 1 cut(s) 148
BsaAI YACGTR 1 cut(s) 553
BsaBI GATNNNNATC 1 cut(s) 936
BsaHI GRCGYC 1 cut(s) 1110
BsaJI CCNNGG 6 cut(s) 26, 363, 885, 1393, 1753, 1945
BsaWI WCCGGW 1 cut(s) 1331
BsaXI ACNNNNNCTCC 2 cut(s) 1258, 1288
Bsc4I CCNNNNNNNGG 6 cut(s) 406, 1208, 1223, 1411, 1516, 1846
Bse118I RCCGGY 1 cut(s) 1331
Bse1I ACTGG 5 cut(s) 173, 259, 1119, 1330, 1369
Bse21I CCTNAGG 1 cut(s) 1809
Bse3DI GCAATG 2 cut(s) 855, 1743
Bse8I GATNNNNATC 1 cut(s) 936
BseBI CCWGG 8 cut(s) 686, 873, 887, 1151, 1170, 1278, 1946, 1989
BseCI ATCGAT 1 cut(s) 148
BseDI CCNNGG 6 cut(s) 26, 363, 885, 1393, 1753, 1945
BseGI GGATG 4 cut(s) 207, 868, 895, 937
BseJI GATNNNNATC 1 cut(s) 936
BseLI CCNNNNNNNGG 6 cut(s) 406, 1208, 1223, 1411, 1516, 1846
BseMI GCAATG 2 cut(s) 855, 1743
BseMII CTCAG 8 cut(s) 198, 322, 339, 933, 1245, 1503, 1800, 1977
BseNI ACTGG 5 cut(s) 173, 259, 1119, 1330, 1369
BseXI GCAGC 2 cut(s) 36, 1705
BseYI CCCAGC 1 cut(s) 1912
BsgI GTGCAG 3 cut(s) 128, 1278, 1551
Bsh1236I CGCG 2 cut(s) 470, 819
BshFI GGCC 2 cut(s) 1212, 1392
BshNI GGYRCC 1 cut(s) 1328
BshTI ACCGGT 1 cut(s) 1331
BshVI ATCGAT 1 cut(s) 148
BsiSI CCGG 2 cut(s) 1060, 1332
BslFI GGGAC 1 cut(s) 1493
BslI CCNNNNNNNGG 6 cut(s) 406, 1208, 1223, 1411, 1516, 1846
BsmAI GTCTC 4 cut(s) 534, 1101, 1117, 1669
BsmBI CGTCTC 2 cut(s) 1101, 1117
BsmFI GGGAC 1 cut(s) 1493
BsmI GAATGC 4 cut(s) 64, 301, 1760, 2043
BsnI GGCC 2 cut(s) 1212, 1392
Bsp119I TTCGAA 1 cut(s) 711
Bsp1286I GDGCHC 1 cut(s) 10
Bsp1720I GCTNAGC 1 cut(s) 207
Bsp19I CCATGG 1 cut(s) 1393
BspACI CCGC 6 cut(s) 191, 331, 817, 1063, 1116, 1873
BspANI GGCC 2 cut(s) 1212, 1392
BspCNI CTCAG 8 cut(s) 199, 321, 340, 934, 1246, 1504, 1801, 1976
BspDI ATCGAT 1 cut(s) 148
BspFNI CGCG 2 cut(s) 470, 819
BspLI GGNNCC 4 cut(s) 726, 987, 1330, 1632
BspMI ACCTGC 2 cut(s) 54, 578
BspOI GCTAGC 1 cut(s) 675
BspPI GGATC 7 cut(s) 164, 375, 926, 980, 993, 1390, 1979
BspT104I TTCGAA 1 cut(s) 711
BspT107I GGYRCC 1 cut(s) 1328
BsrDI GCAATG 2 cut(s) 855, 1743
BsrFI RCCGGY 1 cut(s) 1331
BsrI ACTGG 5 cut(s) 173, 259, 1119, 1330, 1369
BssAI RCCGGY 1 cut(s) 1331
BssECI CCNNGG 6 cut(s) 26, 363, 885, 1393, 1753, 1945
BssNI GRCGYC 1 cut(s) 1110
BssSI CACGAG 1 cut(s) 650
BssT1I CCWWGG 2 cut(s) 363, 1393
Bst2BI CACGAG 1 cut(s) 650
Bst2UI CCWGG 8 cut(s) 686, 873, 887, 1151, 1170, 1278, 1946, 1989
Bst4CI ACNGT 5 cut(s) 729, 789, 1270, 1507, 1925
Bst6I CTCTTC 5 cut(s) 284, 975, 1858, 2081, 2086
BstACI GRCGYC 1 cut(s) 1110
BstAPI GCANNNNNTGC 1 cut(s) 160
BstBAI YACGTR 1 cut(s) 553
BstBI TTCGAA 1 cut(s) 711
BstC8I GCNNGC 6 cut(s) 93, 156, 673, 1303, 1716, 2072
BstDSI CCRYGG 3 cut(s) 26, 1393, 1753
BstF5I GGATG 4 cut(s) 207, 868, 895, 937
BstFNI CGCG 2 cut(s) 470, 819
BstHHI GCGC 1 cut(s) 1558
BstMAI GTCTC 4 cut(s) 534, 1101, 1117, 1669
BstMWI GCNNNNNNNGC 4 cut(s) 68, 101, 160, 653
BstNI CCWGG 8 cut(s) 686, 873, 887, 1151, 1170, 1278, 1946, 1989
BstNSI RCATGY 5 cut(s) 158, 1101, 1472, 1562, 2074
BstSCI CCNGG 9 cut(s) 684, 871, 885, 1058, 1149, 1168, 1276, 1944, 1987
BstSFI CTRYAG 2 cut(s) 183, 1269
BstSNI TACGTA 1 cut(s) 553
BstUI CGCG 2 cut(s) 470, 819
BstV1I GCAGC 2 cut(s) 36, 1705
BstV2I GAAGAC 3 cut(s) 45, 723, 1842
BstX2I RGATCY 5 cut(s) 367, 931, 985, 1382, 1984
BstYI RGATCY 5 cut(s) 367, 931, 985, 1382, 1984
Bsu15I ATCGAT 1 cut(s) 148
Bsu36I CCTNAGG 1 cut(s) 1809
BsuI GTATCC 2 cut(s) 24, 1069
BsuRI GGCC 2 cut(s) 1212, 1392
BsuTUI ATCGAT 1 cut(s) 148
BtgI CCRYGG 3 cut(s) 26, 1393, 1753
BtsCI GGATG 4 cut(s) 207, 868, 895, 937
BtsI GCAGTG 1 cut(s) 158
BtsIMutI CAGTG 4 cut(s) 158, 576, 675, 785
BveI ACCTGC 2 cut(s) 54, 578
Cac8I GCNNGC 6 cut(s) 93, 156, 673, 1303, 1716, 2072
CaiI CAGNNNCTG 1 cut(s) 1511
CfoI GCGC 1 cut(s) 1558
Cfr10I RCCGGY 1 cut(s) 1331
Cfr13I GGNCC 1 cut(s) 1210
ClaI ATCGAT 1 cut(s) 148
Csp6I GTAC 7 cut(s) 219, 315, 918, 1251, 1329, 1445, 2080
CspAI ACCGGT 1 cut(s) 1331
CviQI GTAC 7 cut(s) 219, 315, 918, 1251, 1329, 1445, 2080
EaeI YGGCCR 1 cut(s) 1390
Eam1104I CTCTTC 5 cut(s) 284, 975, 1858, 2081, 2086
EarI CTCTTC 5 cut(s) 284, 975, 1858, 2081, 2086
EciI GGCGGA 2 cut(s) 1078, 1105
Eco105I TACGTA 1 cut(s) 553
Eco130I CCWWGG 2 cut(s) 363, 1393
Eco24I GRGCYC 1 cut(s) 10
Eco57I CTGAAG 2 cut(s) 510, 2105
Eco81I CCTNAGG 1 cut(s) 1809
EcoRII CCWGG 8 cut(s) 684, 871, 885, 1149, 1168, 1276, 1944, 1987
EcoT14I CCWWGG 2 cut(s) 363, 1393
EcoT38I GRGCYC 1 cut(s) 10
ErhI CCWWGG 2 cut(s) 363, 1393
Esp3I CGTCTC 2 cut(s) 1101, 1117
FaqI GGGAC 1 cut(s) 1493
FauI CCCGC 1 cut(s) 1866
FbaI TGATCA 2 cut(s) 892, 1639
FblI GTMKAC 1 cut(s) 1187
Fnu4HI GCNGC 3 cut(s) 50, 192, 1719
FokI GGATG 4 cut(s) 214, 855, 902, 924
FriOI GRGCYC 1 cut(s) 10
Fsp4HI GCNGC 3 cut(s) 50, 192, 1719
FspBI CTAG 8 cut(s) 117, 285, 371, 635, 672, 911, 1248, 2021
GlaI GCGC 1 cut(s) 1557
GluI GCNGC 3 cut(s) 50, 192, 1719
GsaI CCCAGC 1 cut(s) 1916
GsuI CTGGAG 2 cut(s) 1133, 1538
HaeIII GGCC 2 cut(s) 1212, 1392
HapII CCGG 2 cut(s) 1060, 1332
HhaI GCGC 1 cut(s) 1558
Hin1I GRCGYC 1 cut(s) 1110
Hin6I GCGC 1 cut(s) 1556
HinP1I GCGC 1 cut(s) 1556
HincII GTYRAC 1 cut(s) 757
HindII GTYRAC 1 cut(s) 757
HinfI GANTC 4 cut(s) 86, 443, 620, 1460
HpaII CCGG 2 cut(s) 1060, 1332
HphI GGTGA 4 cut(s) 428, 805, 1516, 1928
Hpy166II GTNNAC 6 cut(s) 757, 796, 1178, 1188, 1849, 2104
Hpy188I TCNGA 9 cut(s) 201, 311, 625, 1038, 1382, 1387, 1597, 1677, 2014
Hpy8I GTNNAC 6 cut(s) 757, 796, 1178, 1188, 1849, 2104
Hpy99I CGWCG 1 cut(s) 1896
HpyAV CCTTC 5 cut(s) 485, 551, 861, 1405, 1969
HpyCH4III ACNGT 5 cut(s) 729, 789, 1270, 1507, 1925
HpyCH4IV ACGT 4 cut(s) 217, 552, 1110, 1174
HpyF10VI GCNNNNNNNGC 4 cut(s) 68, 101, 160, 653
HpySE526I ACGT 4 cut(s) 217, 552, 1110, 1174
Hsp92I GRCGYC 1 cut(s) 1110
HspAI GCGC 1 cut(s) 1556
KpnI GGTACC 1 cut(s) 1332
Ksp22I TGATCA 2 cut(s) 892, 1639
LmnI GCTCC 1 cut(s) 1279
Lsp1109I GCAGC 2 cut(s) 36, 1705
LweI GCATC 3 cut(s) 409, 891, 1250
MaeI CTAG 8 cut(s) 117, 285, 371, 635, 672, 911, 1248, 2021
MaeII ACGT 4 cut(s) 217, 552, 1110, 1174
MaeIII GTNAC 1 cut(s) 502
MflI RGATCY 5 cut(s) 367, 931, 985, 1382, 1984
MhlI GDGCHC 1 cut(s) 10
MlsI TGGCCA 1 cut(s) 1392
MluCI AATT 9 cut(s) 137, 229, 338, 358, 529, 1232, 1423, 1588, 1648
MluI ACGCGT 1 cut(s) 468
MluNI TGGCCA 1 cut(s) 1392
MlyI GAGTC 1 cut(s) 437
MmeI TCCRAC 2 cut(s) 1047, 1360
Mox20I TGGCCA 1 cut(s) 1392
MroXI GAANNNNTTC 1 cut(s) 124
MscI TGGCCA 1 cut(s) 1392
MseI TTAA 5 cut(s) 974, 1071, 1259, 1455, 2000
MslI CAYNNNNRTG 1 cut(s) 1563
Msp20I TGGCCA 1 cut(s) 1392
MspI CCGG 2 cut(s) 1060, 1332
MspR9I CCNGG 9 cut(s) 686, 873, 887, 1060, 1151, 1170, 1278, 1946, 1989
Mva1269I GAATGC 4 cut(s) 64, 301, 1760, 2043
MvaI CCWGG 8 cut(s) 686, 873, 887, 1151, 1170, 1278, 1946, 1989
MvnI CGCG 2 cut(s) 470, 819
MwoI GCNNNNNNNGC 4 cut(s) 68, 101, 160, 653
NciI CCSGG 1 cut(s) 1060
NcoI CCATGG 1 cut(s) 1393
NheI GCTAGC 1 cut(s) 671
NlaIV GGNNCC 4 cut(s) 726, 987, 1330, 1632
NmuCI GTSAC 1 cut(s) 502
NspI RCATGY 5 cut(s) 158, 1101, 1472, 1562, 2074
NspV TTCGAA 1 cut(s) 711
PaeI GCATGC 2 cut(s) 158, 2074
PciI ACATGT 1 cut(s) 1097
PctI GAATGC 4 cut(s) 64, 301, 1760, 2043
PdmI GAANNNNTTC 1 cut(s) 124
PfeI GAWTC 3 cut(s) 86, 620, 1460
PflMI CCANNNNNTGG 1 cut(s) 406
PfoI TCCNGGA 2 cut(s) 871, 1987
PinAI ACCGGT 1 cut(s) 1331
PkrI GCNGC 3 cut(s) 51, 193, 1720
PleI GAGTC 1 cut(s) 437
PpsI GAGTC 1 cut(s) 437
Ppu21I YACGTR 1 cut(s) 553
PscI ACATGT 1 cut(s) 1097
Psp6I CCWGG 8 cut(s) 684, 871, 885, 1149, 1168, 1276, 1944, 1987
PspFI CCCAGC 1 cut(s) 1912
PspGI CCWGG 8 cut(s) 684, 871, 885, 1149, 1168, 1276, 1944, 1987
PspN4I GGNNCC 4 cut(s) 726, 987, 1330, 1632
PspPI GGNCC 1 cut(s) 1210
PstNI CAGNNNCTG 1 cut(s) 1511
PsuI RGATCY 5 cut(s) 367, 931, 985, 1382, 1984
RsaI GTAC 7 cut(s) 220, 316, 919, 1252, 1330, 1446, 2081
RsaNI GTAC 7 cut(s) 219, 315, 918, 1251, 1329, 1445, 2080
RseI CAYNNNNRTG 1 cut(s) 1563
SaqAI TTAA 5 cut(s) 974, 1071, 1259, 1455, 2000
SatI GCNGC 3 cut(s) 50, 192, 1719
Sau96I GGNCC 1 cut(s) 1210
ScaI AGTACT 2 cut(s) 316, 1252
SchI GAGTC 1 cut(s) 437
ScrFI CCNGG 9 cut(s) 686, 873, 887, 1060, 1151, 1170, 1278, 1946, 1989
SduI GDGCHC 1 cut(s) 10
SfaNI GCATC 3 cut(s) 409, 891, 1250
SfcI CTRYAG 2 cut(s) 183, 1269
SfuI TTCGAA 1 cut(s) 711
SmiMI CAYNNNNRTG 1 cut(s) 1563
SmlI CTYRAG 5 cut(s) 15, 437, 905, 1191, 1709
SmoI CTYRAG 5 cut(s) 15, 437, 905, 1191, 1709
SnaBI TACGTA 1 cut(s) 553
SpeI ACTAGT 1 cut(s) 1247
SphI GCATGC 2 cut(s) 158, 2074
Sse9I AATT 9 cut(s) 137, 229, 338, 358, 529, 1232, 1423, 1588, 1648
SsiI CCGC 6 cut(s) 191, 331, 817, 1063, 1116, 1873
SspMI CTAG 8 cut(s) 117, 285, 371, 635, 672, 911, 1248, 2021
StyD4I CCNGG 9 cut(s) 684, 871, 885, 1058, 1149, 1168, 1276, 1944, 1987
StyI CCWWGG 2 cut(s) 363, 1393
TaaI ACNGT 5 cut(s) 729, 789, 1270, 1507, 1925
TaiI ACGT 4 cut(s) 220, 555, 1113, 1177
TaqI TCGA 6 cut(s) 66, 148, 711, 1244, 1659, 1891
TasI AATT 9 cut(s) 137, 229, 338, 358, 529, 1232, 1423, 1588, 1648
TatI WGTACW 2 cut(s) 314, 1250
TauI GCSGC 1 cut(s) 194
TfiI GAWTC 3 cut(s) 86, 620, 1460
Tru1I TTAA 5 cut(s) 974, 1071, 1259, 1455, 2000
Tru9I TTAA 5 cut(s) 974, 1071, 1259, 1455, 2000
TscAI CASTG 4 cut(s) 165, 583, 682, 792
TseFI GTSAC 1 cut(s) 502
TseI GCWGC 2 cut(s) 49, 1718
Tsp45I GTSAC 1 cut(s) 502
TspDTI ATGAA 8 cut(s) 270, 394, 602, 721, 1473, 1703, 1716, 1922
TspGWI ACGGA 2 cut(s) 15, 987
TspRI CASTG 4 cut(s) 165, 583, 682, 792
Van91I CCANNNNNTGG 1 cut(s) 406
XapI RAATTY 2 cut(s) 338, 1232
XbaI TCTAGA 1 cut(s) 116
XceI RCATGY 5 cut(s) 158, 1101, 1472, 1562, 2074
XmiI GTMKAC 1 cut(s) 1187
XmnI GAANNNNTTC 1 cut(s) 124
XspI CTAG 8 cut(s) 117, 285, 371, 635, 672, 911, 1248, 2021
ZraI GACGTC 1 cut(s) 1111
ZrmI AGTACT 2 cut(s) 316, 1252
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.