RLG00000011197

N-terminal region of micro-spherule protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0005427
Physical Location & Seq
Reverse (-)
7527965 .. 7533527
5563 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000011197

Sequence Viewer

Length: 2388 bp
ATGGCCGGGGACGCATCTGCGTTGCGGAGCTCGGCCGTTGGTGCTTGGATTCCGGCGGACGATGTTTTGCTCAAGAACGCTGTTGAGGCTGGTGCTTCCTTGGAATCACTTGCTAAAGGTGCGGTTCATTTTTCTCGAAGGTTTACTGTGCAAGAACTTCAAAATCGGTGGTACTCTATCCTATACGATCCAGTTGTGGCTGAAGAGGCTTCTGCTCGCATGACTGAGTTTGAGTGTTCCGCTCCAAATTCCACATCAAAGTTTAGTAGGATAGGAAGTTCAAAAGAAAACAAATGTGTTCCTGGAAAGAGAAAAGCTGAAAGTGTTCGGAGTAGTTACTATGCTCTGCGTAAAAGGATCTGCAGTGAGCCATTTGATCCCATGGACCTCAATTTTATACTTGCACCCAGTGATAGCAACTATATTGTAAATGGAGATGAGCCTCTATCTGAACATGTCATGACTGGAGATCCAATCTCAAACCATTTTGGAGTTGAGGGATCCGATATGGACAATACTATGCATCATATGTTTCCACAAAATCTGATGCATGACAGCACTGCTGTTGGTGGTATTGTTACTGTGGATACGTTTCAGATTGGAGGGTTCCAGAAGCCTGCTGAAGAAGATTTTTTAGTTGAGCAAGATAATCTACGTGAAGAAGCTCCTTACACTGAAGACAATCTGCCTATCACAGGGAATGAATCTGAGGTCAAGGAATTCGGTCAACCAAAGGAATTGCCAGATTGCAGCATGTTCTGTGCTGGTGATCTAGGAATGGAACCTCCTTGTTCACTTGATCAAATTAATAATGATGAGGTAAATATGTGTTCCCCATTTGAAGGGAATCAGGTTTTTAATGTATCTGCTTCAGACAGTAGTGCATCATTTCACGACTTGGAGTATTCAACTCAACTTCCTGGCACACATATCTGGAGCACAGTTCCAGCAACAACTACGCCAGTTGATGTTGGTATCAGAGAGAATGATACGTGTACCAGAGATTCTTTTGAACTTCTTGACGATATTGGTGCTAATAACACTACAATATCAGGGTATGATATTGACTTGAGGACGGAAATGGCAGTCAGTGATTTCAAGAGTCCAGCTAGTACTGAAGTTTATTTGGCAGAATTGTCCAATTCCCTTTTGAACTTTACAAGTGAGGAGGAACTTATGTTCAAAGATGAGATCGATAAGTCTTACTATGATGGCCTGAGCTCACTTTTGATGAGTTCGCCAAAGGATGATGTTGAAGAACACATGATTAATCTAATTGAGCCAGAGACATTGATGGCTTCAGTTATGTACCCTATGAATCCCTCTGGTACAGATCCTGCAGTGGCAGATGACATAAGGGCGTCCTTCCCTGGTGATGATATGAATTGCCATCCAGAGACGCTGATGCAATCATCTCCAACAGCTTTGAACTCTCAGTTTCCCGAATATAAAGATGGAGTTATCTGTTGCACGTTAAATACTGAGGAATGGGAAATTCCATGCAACGATGACGTGTTTCTTCTCAATCATATGCCATTGTCATCAACTTCCTGTAAAGTCAAAGAAGCCAGTAAGCCAAAGTCGAAATGTTCATCTGTTAAGGATCTCGCAGTTAATCAAAGAAAGGGTGATGCTGGCCCCCGCTTTATGCAAAAAGAACAAAGGAATCCTGGAAAATCTCTTGGATCTCAGAGTAAAGGATCACACTGTATACCAGAAGTGAGTTCAAAATCACCTCTGTGTTTTGAGCTGTCCAAGACTGATCCCGTTGATGTGGCTTCTACGAGTACATGTCATGTCAGTGGTAATCGGGGTCAAATTGATTCGGCTAAAGCAATCACAAATCCTCTTCCTGGAATTATGAAGGAAGACACTAGAGATGGCACATTGACAATGTGTCTTGGGTATGCCTCAACAGAGTCTCATATGGCAAACTCATGTGTTGATTATGATTGCGTTAGAAGCTATCCTCAGCCATATGCTACTGAGACTAATTGGGAATCTGATGCATCAGCTACAATTAGAGATCATCAATCATTACATGCAGAAGTTGTGCCAATGGATAATGCTGTCTCAGAACCAGAAGTAAACCCAGTGACATCAGATTTTGAGGGTCTTTTCGATAGTGATGATGATATACCATGTTATTCGGATATAGAGGCAATGATACTTGACATGGATTTGGATCCAGATGACCAAGAAATTTATCATGGTGAGGAAGTCTCAAGATATCAGGATGACGACACTAGGAGAGCAATCATGAGACTGGAGCAGGGTGCTTATTCTTACATGCAAAGAGCCATTGCATCTCACGGAGCATTTGCCATTTTGTATGGGCGTCATTCTAAGCATTATATTAAGAAGCCTGAGGTTTGGAATTGCTCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000123 GO:0000228 GO:0000785 GO:0000790 GO:0002151 GO:0003674 GO:0003676 GO:0003723 GO:0003727 GO:0004857 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005730 GO:0005737 GO:0005783 GO:0005844 GO:0006325 GO:0006464 GO:0006473 GO:0006475 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008187 GO:0008266 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010521 GO:0010556 GO:0010558 GO:0010605 GO:0010639 GO:0012505 GO:0016043 GO:0016569 GO:0016570 GO:0016573 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019219 GO:0019222 GO:0019538 GO:0030234 GO:0030425 GO:0031011 GO:0031248 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0032204 GO:0032205 GO:0032879 GO:0032880 GO:0032991 GO:0033043 GO:0033044 GO:0033202 GO:0034046 GO:0034708 GO:0035097 GO:0036211 GO:0036477 GO:0042995 GO:0043005 GO:0043025 GO:0043086 GO:0043170 GO:0043204 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043543 GO:0043967 GO:0043981 GO:0043982 GO:0043984 GO:0044092 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044297 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044454 GO:0044463 GO:0044464 GO:0044665 GO:0045934 GO:0048518 GO:0048519 GO:0048523 GO:0050789 GO:0050790 GO:0050794 GO:0051052 GO:0051053 GO:0051128 GO:0051129 GO:0051171 GO:0051172 GO:0051276 GO:0051338 GO:0051348 GO:0051972 GO:0051974 GO:0060255 GO:0060341 GO:0065007 GO:0065008 GO:0065009 GO:0070013 GO:0070603 GO:0070717 GO:0071339 GO:0071704 GO:0071840 GO:0080090 GO:0097159 GO:0097346 GO:0097447 GO:0097458 GO:0098772 GO:0120025 GO:0120038 GO:1900180 GO:1900182 GO:1901363 GO:1901564 GO:1902493 GO:1902494 GO:1903827 GO:1903829 GO:1904356 GO:1904357 GO:1904749 GO:1904751 GO:1904949 GO:1990234 GO:1990904 GO:2000112 GO:2000113 GO:2000278 GO:2000279 GO:2001251
KEGG Pathways
Metabolic & Signaling
ko05168 map05168
Pfam Domains
Protein Families
FHA MCRS_N

Protein Analysis

796

Amino Acids

87.69

Weight (kDa)

4.45

Isoelectric Point (pI)

49.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MCRS_N PF13325 16 - 99 6.8e-15 N-terminal region of micro-spherule protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 242
AccI GTMKAC 1 cut(s) 1711
AciI CCGC 5 cut(s) 25, 56, 122, 240, 1642
AcoI YGGCCR 2 cut(s) 3, 33
AcsI RAATTY 4 cut(s) 247, 719, 1494, 2202
AcuI CTGAAG 6 cut(s) 222, 642, 696, 855, 1137, 1284
AcyI GRCGYC 2 cut(s) 1361, 2338
AdeI CACNNNGTG 1 cut(s) 410
AfaI GTAC 6 cut(s) 173, 997, 1114, 1310, 1330, 1789
AfiI CCNNNNNNNGG 3 cut(s) 695, 842, 1853
AflIII ACRYGT 4 cut(s) 454, 992, 1512, 1790
AhdI GACNNNNNGTC 1 cut(s) 1896
AjiI CACGTC 1 cut(s) 1513
AjnI CCWGG 5 cut(s) 301, 919, 1369, 1669, 1852
AleI CACNNNNGTG 1 cut(s) 1738
AloI GAACNNNNNNTCC 4 cut(s) 262, 294, 1163, 1195
AluBI AGCT 9 cut(s) 30, 317, 665, 1109, 1221, 1424, 1750, 1965, 2015
AluI AGCT 9 cut(s) 30, 317, 665, 1109, 1221, 1424, 1750, 1965, 2015
Alw21I GWGCWC 3 cut(s) 32, 941, 1223
Alw26I GTCTC 7 cut(s) 1280, 1391, 1926, 1982, 2077, 2227, 2257
AlwNI CAGNNNCTG 1 cut(s) 1337
AoxI GGCC 4 cut(s) 3, 33, 1213, 1636
ApeKI GCWGC 1 cut(s) 750
ApoI RAATTY 4 cut(s) 247, 719, 1494, 2202
AseI ATTAAT 2 cut(s) 807, 1269
Asp700I GAANNNNTTC 1 cut(s) 324
AspS9I GGNCC 2 cut(s) 385, 1637
AsuC2I CCSGG 1 cut(s) 7
AsuHPI GGTGA 5 cut(s) 779, 1385, 1640, 1725, 2225
AvaII GGWCC 1 cut(s) 385
AxyI CCTNAGG 1 cut(s) 2367
BamHI GGATCC 2 cut(s) 500, 2185
BanII GRGCYC 2 cut(s) 32, 1223
BbsI GAAGAC 2 cut(s) 684, 1875
Bbv12I GWGCWC 3 cut(s) 32, 941, 1223
BbvCI CCTCAGC 1 cut(s) 1971
BbvI GCAGC 1 cut(s) 762
BccI CCATC 5 cut(s) 1205, 1288, 1398, 1448, 1874
BceAI ACGGC 1 cut(s) 20
BcgI CGANNNNNNTGC 2 cut(s) 1013, 1047
BciT130I CCWGG 5 cut(s) 303, 921, 1371, 1671, 1854
BciVI GTATCC 1 cut(s) 580
BclI TGATCA 1 cut(s) 799
BcnI CCSGG 1 cut(s) 7
BcoDI GTCTC 7 cut(s) 1280, 1391, 1926, 1982, 2077, 2227, 2257
BfaI CTAG 4 cut(s) 773, 1110, 1875, 2247
BfmI CTRYAG 2 cut(s) 361, 1338
BfuI GTATCC 1 cut(s) 580
BisI GCNGC 1 cut(s) 751
BlsI GCNGC 1 cut(s) 752
BmcAI AGTACT 1 cut(s) 1114
Bme1390I CCNGG 6 cut(s) 7, 303, 921, 1371, 1671, 1854
Bme18I GGWCC 1 cut(s) 385
BmeRI GACNNNNNGTC 1 cut(s) 1896
BmgBI CACGTC 1 cut(s) 1513
BmgT120I GGNCC 2 cut(s) 385, 1637
BmiI GGNNCC 5 cut(s) 502, 608, 783, 1639, 2187
BmrFI CCNGG 6 cut(s) 7, 303, 921, 1371, 1671, 1854
BmrI ACTGGG 2 cut(s) 402, 2087
BmsI GCATC 9 cut(s) 23, 532, 537, 893, 1395, 1621, 1996, 2018, 2315
BmuI ACTGGG 2 cut(s) 402, 2087
BpiI GAAGAC 2 cut(s) 684, 1875
BplI GAGNNNNNCTC 2 cut(s) 2207, 2239
BpmI CTGGAG 3 cut(s) 486, 955, 2288
Bpu10I CCTNAGC 2 cut(s) 1217, 1971
BpuEI CTTGAG 3 cut(s) 56, 1090, 2209
BpuMI CCSGG 1 cut(s) 7
Bsa29I ATCGAT 1 cut(s) 1194
BsaAI YACGTR 2 cut(s) 656, 993
BsaBI GATNNNNATC 1 cut(s) 2184
BsaHI GRCGYC 2 cut(s) 1361, 2338
BsaJI CCNNGG 4 cut(s) 6, 99, 381, 1369
Bsc4I CCNNNNNNNGG 3 cut(s) 695, 842, 1853
Bse1I ACTGG 7 cut(s) 191, 408, 469, 962, 1569, 2093, 2271
Bse21I CCTNAGG 1 cut(s) 2367
Bse3DI GCAATG 2 cut(s) 2169, 2301
Bse8I GATNNNNATC 1 cut(s) 2184
BseBI CCWGG 5 cut(s) 303, 921, 1371, 1671, 1854
BseCI ATCGAT 1 cut(s) 1194
BseDI CCNNGG 4 cut(s) 6, 99, 381, 1369
BseGI GGATG 3 cut(s) 1252, 1390, 2242
BseJI GATNNNNATC 1 cut(s) 2184
BseLI CCNNNNNNNGG 3 cut(s) 695, 842, 1853
BseMI GCAATG 2 cut(s) 2169, 2301
BseNI ACTGG 7 cut(s) 191, 408, 469, 962, 1569, 2093, 2271
BseRI GAGGAG 1 cut(s) 1181
BseX3I CGGCCG 1 cut(s) 33
BseXI GCAGC 1 cut(s) 762
Bsh1285I CGRYCG 1 cut(s) 36
BshFI GGCC 4 cut(s) 5, 35, 1215, 1638
BshVI ATCGAT 1 cut(s) 1194
BsiEI CGRYCG 1 cut(s) 36
BsiHKAI GWGCWC 3 cut(s) 32, 941, 1223
BsiSI CCGG 2 cut(s) 6, 53
BslFI GGGAC 1 cut(s) 23
BslI CCNNNNNNNGG 3 cut(s) 695, 842, 1853
BsmAI GTCTC 7 cut(s) 1280, 1391, 1926, 1982, 2077, 2227, 2257
BsmBI CGTCTC 1 cut(s) 1391
BsmFI GGGAC 1 cut(s) 23
BsnI GGCC 4 cut(s) 5, 35, 1215, 1638
Bsp1286I GDGCHC 3 cut(s) 32, 941, 1223
Bsp19I CCATGG 1 cut(s) 381
BspACI CCGC 5 cut(s) 25, 56, 122, 240, 1642
BspANI GGCC 4 cut(s) 5, 35, 1215, 1638
BspDI ATCGAT 1 cut(s) 1194
BspHI TCATGA 2 cut(s) 459, 2259
BspLI GGNNCC 5 cut(s) 502, 608, 783, 1639, 2187
BspMAI CTGCAG 2 cut(s) 365, 1342
BsrBI CCGCTC 1 cut(s) 242
BsrDI GCAATG 2 cut(s) 2169, 2301
BsrI ACTGG 7 cut(s) 191, 408, 469, 962, 1569, 2093, 2271
BssECI CCNNGG 4 cut(s) 6, 99, 381, 1369
BssNAI GTATAC 1 cut(s) 1712
BssNI GRCGYC 2 cut(s) 1361, 2338
BssT1I CCWWGG 2 cut(s) 99, 381
Bst1107I GTATAC 1 cut(s) 1712
Bst2UI CCWGG 5 cut(s) 303, 921, 1371, 1671, 1854
Bst4CI ACNGT 5 cut(s) 148, 583, 878, 943, 1709
Bst6I CTCTTC 2 cut(s) 198, 1854
BstACI GRCGYC 2 cut(s) 1361, 2338
BstBAI YACGTR 2 cut(s) 656, 993
BstC8I GCNNGC 3 cut(s) 217, 618, 1636
BstDSI CCRYGG 1 cut(s) 381
BstENI CCTNNNNNAGG 1 cut(s) 693
BstF5I GGATG 3 cut(s) 1252, 1390, 2242
BstMAI GTCTC 7 cut(s) 1280, 1391, 1926, 1982, 2077, 2227, 2257
BstMCI CGRYCG 1 cut(s) 36
BstMWI GCNNNNNNNGC 6 cut(s) 11, 41, 86, 119, 206, 1962
BstNI CCWGG 5 cut(s) 303, 921, 1371, 1671, 1854
BstNSI RCATGY 5 cut(s) 458, 757, 1794, 2045, 2293
BstSCI CCNGG 6 cut(s) 5, 301, 919, 1369, 1669, 1852
BstSFI CTRYAG 2 cut(s) 361, 1338
BstV1I GCAGC 1 cut(s) 762
BstV2I GAAGAC 2 cut(s) 684, 1875
BstX2I RGATCY 7 cut(s) 357, 469, 500, 1333, 1603, 1685, 2185
BstYI RGATCY 7 cut(s) 357, 469, 500, 1333, 1603, 1685, 2185
BstZ17I GTATAC 1 cut(s) 1712
BstZI CGGCCG 1 cut(s) 33
Bsu15I ATCGAT 1 cut(s) 1194
Bsu36I CCTNAGG 1 cut(s) 2367
BsuI GTATCC 1 cut(s) 580
BsuRI GGCC 4 cut(s) 5, 35, 1215, 1638
BsuTUI ATCGAT 1 cut(s) 1194
BtgI CCRYGG 1 cut(s) 381
BtrI CACGTC 1 cut(s) 1513
BtsCI GGATG 3 cut(s) 1252, 1390, 2242
BtsI GCAGTG 3 cut(s) 370, 558, 1347
BtsIMutI CAGTG 9 cut(s) 370, 415, 558, 672, 1096, 1347, 1705, 1807, 2100
Cac8I GCNNGC 3 cut(s) 217, 618, 1636
CaiI CAGNNNCTG 1 cut(s) 1337
CciI TCATGA 2 cut(s) 459, 2259
Cfr13I GGNCC 2 cut(s) 385, 1637
ClaI ATCGAT 1 cut(s) 1194
CseI GACGC 4 cut(s) 20, 1350, 1408, 2327
Csp6I GTAC 6 cut(s) 172, 996, 1113, 1309, 1329, 1788
CspCI CAANNNNNGTGG 2 cut(s) 149, 184
CviQI GTAC 6 cut(s) 172, 996, 1113, 1309, 1329, 1788
DraIII CACNNNGTG 1 cut(s) 410
DriI GACNNNNNGTC 1 cut(s) 1896
EaeI YGGCCR 2 cut(s) 3, 33
EagI CGGCCG 1 cut(s) 33
Eam1104I CTCTTC 2 cut(s) 198, 1854
Eam1105I GACNNNNNGTC 1 cut(s) 1896
EarI CTCTTC 2 cut(s) 198, 1854
EciI GGCGGA 1 cut(s) 71
Ecl136II GAGCTC 2 cut(s) 30, 1221
EclXI CGGCCG 1 cut(s) 33
Eco130I CCWWGG 2 cut(s) 99, 381
Eco24I GRGCYC 2 cut(s) 32, 1223
Eco32I GATATC 1 cut(s) 2231
Eco47I GGWCC 1 cut(s) 385
Eco52I CGGCCG 1 cut(s) 33
Eco53kI GAGCTC 2 cut(s) 30, 1221
Eco57I CTGAAG 6 cut(s) 222, 642, 696, 855, 1137, 1284
Eco81I CCTNAGG 1 cut(s) 2367
EcoICRI GAGCTC 2 cut(s) 30, 1221
EcoNI CCTNNNNNAGG 1 cut(s) 693
EcoRI GAATTC 1 cut(s) 719
EcoRII CCWGG 5 cut(s) 301, 919, 1369, 1669, 1852
EcoRV GATATC 1 cut(s) 2231
EcoT14I CCWWGG 2 cut(s) 99, 381
EcoT22I ATGCAT 3 cut(s) 525, 552, 2011
EcoT38I GRGCYC 2 cut(s) 32, 1223
ErhI CCWWGG 2 cut(s) 99, 381
Esp3I CGTCTC 1 cut(s) 1391
FaqI GGGAC 1 cut(s) 23
FauI CCCGC 1 cut(s) 1649
FauNDI CATATG 4 cut(s) 528, 1530, 1926, 1978
FbaI TGATCA 1 cut(s) 799
FblI GTMKAC 1 cut(s) 1711
Fnu4HI GCNGC 1 cut(s) 751
FokI GGATG 3 cut(s) 1259, 1377, 2249
FriOI GRGCYC 2 cut(s) 32, 1223
Fsp4HI GCNGC 1 cut(s) 751
FspBI CTAG 4 cut(s) 773, 1110, 1875, 2247
GluI GCNGC 1 cut(s) 751
GsuI CTGGAG 3 cut(s) 486, 955, 2288
HaeIII GGCC 4 cut(s) 5, 35, 1215, 1638
HapII CCGG 2 cut(s) 6, 53
HgaI GACGC 4 cut(s) 20, 1350, 1408, 2327
Hin1I GRCGYC 2 cut(s) 1361, 2338
HincII GTYRAC 1 cut(s) 728
HindII GTYRAC 1 cut(s) 728
HpaII CCGG 2 cut(s) 6, 53
HphI GGTGA 5 cut(s) 779, 1385, 1640, 1725, 2225
Hpy166II GTNNAC 6 cut(s) 144, 728, 794, 996, 1712, 2089
Hpy8I GTNNAC 6 cut(s) 144, 728, 794, 996, 1712, 2089
HpyAV CCTTC 4 cut(s) 132, 836, 1375, 1858
HpyCH4III ACNGT 5 cut(s) 148, 583, 878, 943, 1709
HpyCH4IV ACGT 5 cut(s) 590, 655, 992, 1472, 1512
HpyF10VI GCNNNNNNNGC 6 cut(s) 11, 41, 86, 119, 206, 1962
HpySE526I ACGT 5 cut(s) 590, 655, 992, 1472, 1512
Hsp92I GRCGYC 2 cut(s) 1361, 2338
Ksp22I TGATCA 1 cut(s) 799
LmnI GCTCC 6 cut(s) 27, 247, 670, 936, 2269, 2315
Lsp1109I GCAGC 1 cut(s) 762
LweI GCATC 9 cut(s) 23, 532, 537, 893, 1395, 1621, 1996, 2018, 2315
MaeI CTAG 4 cut(s) 773, 1110, 1875, 2247
MaeII ACGT 5 cut(s) 590, 655, 992, 1472, 1512
MaeIII GTNAC 3 cut(s) 335, 577, 2095
MbiI CCGCTC 1 cut(s) 242
MboII GAAGA 9 cut(s) 215, 635, 638, 671, 689, 1268, 1511, 1841, 1880
MflI RGATCY 7 cut(s) 357, 469, 500, 1333, 1603, 1685, 2185
MhlI GDGCHC 3 cut(s) 32, 941, 1223
MlyI GAGTC 2 cut(s) 1111, 1928
MmeI TCCRAC 1 cut(s) 1442
Mph1103I ATGCAT 3 cut(s) 525, 552, 2011
MroXI GAANNNNTTC 1 cut(s) 324
MseI TTAA 8 cut(s) 807, 858, 1269, 1475, 1599, 1614, 2358, 2386
MslI CAYNNNNRTG 2 cut(s) 1738, 1800
MspI CCGG 2 cut(s) 6, 53
MspR9I CCNGG 6 cut(s) 7, 303, 921, 1371, 1671, 1854
MvaI CCWGG 5 cut(s) 303, 921, 1371, 1671, 1854
MwoI GCNNNNNNNGC 6 cut(s) 11, 41, 86, 119, 206, 1962
NciI CCSGG 1 cut(s) 7
NcoI CCATGG 1 cut(s) 381
NdeI CATATG 4 cut(s) 528, 1530, 1926, 1978
NlaIV GGNNCC 5 cut(s) 502, 608, 783, 1639, 2187
NmeAIII GCCGAG 1 cut(s) 11
NmuCI GTSAC 1 cut(s) 2095
NsiI ATGCAT 3 cut(s) 525, 552, 2011
NspI RCATGY 5 cut(s) 458, 757, 1794, 2045, 2293
OliI CACNNNNGTG 1 cut(s) 1738
PagI TCATGA 2 cut(s) 459, 2259
PciI ACATGT 2 cut(s) 454, 1790
PdmI GAANNNNTTC 1 cut(s) 324
PfeI GAWTC 9 cut(s) 49, 104, 704, 847, 1004, 1318, 1666, 1823, 2000
PfoI TCCNGGA 3 cut(s) 301, 1669, 1852
PkrI GCNGC 1 cut(s) 752
PleI GAGTC 2 cut(s) 1110, 1927
PpsI GAGTC 2 cut(s) 1110, 1927
Ppu21I YACGTR 2 cut(s) 656, 993
PscI ACATGT 2 cut(s) 454, 1790
PshBI ATTAAT 2 cut(s) 807, 1269
Psp124BI GAGCTC 2 cut(s) 32, 1223
Psp6I CCWGG 5 cut(s) 301, 919, 1369, 1669, 1852
PspGI CCWGG 5 cut(s) 301, 919, 1369, 1669, 1852
PspN4I GGNNCC 5 cut(s) 502, 608, 783, 1639, 2187
PspPI GGNCC 2 cut(s) 385, 1637
PstI CTGCAG 2 cut(s) 365, 1342
PstNI CAGNNNCTG 1 cut(s) 1337
PsuI RGATCY 7 cut(s) 357, 469, 500, 1333, 1603, 1685, 2185
RsaI GTAC 6 cut(s) 173, 997, 1114, 1310, 1330, 1789
RsaNI GTAC 6 cut(s) 172, 996, 1113, 1309, 1329, 1788
RseI CAYNNNNRTG 2 cut(s) 1738, 1800
SacI GAGCTC 2 cut(s) 32, 1223
SaqAI TTAA 8 cut(s) 807, 858, 1269, 1475, 1599, 1614, 2358, 2386
SatI GCNGC 1 cut(s) 751
Sau96I GGNCC 2 cut(s) 385, 1637
ScaI AGTACT 1 cut(s) 1114
SchI GAGTC 2 cut(s) 1111, 1928
ScrFI CCNGG 6 cut(s) 7, 303, 921, 1371, 1671, 1854
SduI GDGCHC 3 cut(s) 32, 941, 1223
SfaNI GCATC 9 cut(s) 23, 532, 537, 893, 1395, 1621, 1996, 2018, 2315
SfcI CTRYAG 2 cut(s) 361, 1338
SinI GGWCC 1 cut(s) 385
SmiMI CAYNNNNRTG 2 cut(s) 1738, 1800
SmlI CTYRAG 3 cut(s) 71, 1069, 2224
SmoI CTYRAG 3 cut(s) 71, 1069, 2224
SsiI CCGC 5 cut(s) 25, 56, 122, 240, 1642
SspMI CTAG 4 cut(s) 773, 1110, 1875, 2247
SstI GAGCTC 2 cut(s) 32, 1223
StyD4I CCNGG 6 cut(s) 5, 301, 919, 1369, 1669, 1852
StyI CCWWGG 2 cut(s) 99, 381
TaaI ACNGT 5 cut(s) 148, 583, 878, 943, 1709
TaiI ACGT 5 cut(s) 593, 658, 995, 1475, 1515
TaqI TCGA 4 cut(s) 136, 1194, 1583, 2121
TaqII GACCGA 1 cut(s) 713
TatI WGTACW 2 cut(s) 1112, 1787
TfiI GAWTC 9 cut(s) 49, 104, 704, 847, 1004, 1318, 1666, 1823, 2000
Tru1I TTAA 8 cut(s) 807, 858, 1269, 1475, 1599, 1614, 2358, 2386
Tru9I TTAA 8 cut(s) 807, 858, 1269, 1475, 1599, 1614, 2358, 2386
TscAI CASTG 9 cut(s) 370, 415, 565, 679, 1096, 1347, 1712, 1807, 2100
TseFI GTSAC 1 cut(s) 2095
TseI GCWGC 1 cut(s) 750
Tsp45I GTSAC 1 cut(s) 2095
TspDTI ATGAA 6 cut(s) 116, 717, 1331, 1397, 1581, 1877
TspGWI ACGGA 2 cut(s) 1091, 2328
TspRI CASTG 9 cut(s) 370, 415, 565, 679, 1096, 1347, 1712, 1807, 2100
VpaK11BI GGWCC 1 cut(s) 385
VspI ATTAAT 2 cut(s) 807, 1269
XagI CCTNNNNNAGG 1 cut(s) 693
XapI RAATTY 4 cut(s) 247, 719, 1494, 2202
XceI RCATGY 5 cut(s) 458, 757, 1794, 2045, 2293
XmiI GTMKAC 1 cut(s) 1711
XmnI GAANNNNTTC 1 cut(s) 324
XspI CTAG 4 cut(s) 773, 1110, 1875, 2247
ZrmI AGTACT 1 cut(s) 1114
Zsp2I ATGCAT 3 cut(s) 525, 552, 2011
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.