AT3G54790

U-box domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0005506
Physical Location & Seq
Reverse (-)
20281535 .. 20285290
3756 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G54790.2

Sequence Viewer

Length: 2283 bp
ATGGATCCTGTTCCTGTTCGATGTCTTCTTAACAGTATATCTCGGTATCTTCATCTGGTTGCGTGCCAGACTATAAGATTTAATCCTATTCAAACATGTATTGGAAATATGGTTCTCTTGTTGAAGCTCTTGAAACCGTTGCTCGATGAAGTTGTTGATTGCAAGATACCTTCTGATGACTGTTTATATAAAGGATGTGAAGACCTTGATTCTGTTGTTAACCAGGCTCGGGAGTTCTTAGAGGACTGGTCACCAAAGTTGAGCAAGTTGTTTGGTGTGTTTCAATGCGAGGTTTTGTTGGGAAAGGTCCAGACTTGTTCGTTGGAGATTAGTCGCATACTTCTTCAGTTATCACAGTCAAGTCCGGTTACTTCAAGCGTACAAAGTGTTGAGCGCTGCGTGCAGGAGACTGAGAGTTTTAAGCAAGAGGGGACATTAATGGAACTCATGGAGAATGCTTTACGGAATCAGAAAGATGATATTACCTCTTTGGATAACAATCATCTGGAAAGCATAATTCAAATGCTTGGATTGATATCAAACCAAGATCTCTTAAAGGAAAGCATTACTGTGGAGAAAGAGAGGATAAGATCCCAGGCCAGTAAGTCAGAAGAAGATATGGAACAAACCGAACAGTTGATAGAACTCGTCTTGTGCATCCGTGAACACATGCTTAAAACTGAGTTTCTTGAAGTGGCTAAAGGTATCTCGATACCCCCGTATTTCCGGTGTCCTTTGTCAACAGAACTCATGCTGGATCCGGTAATAGTAGCTTCAGGACAGACATTTGACAGAACATCCATTAAGAAATGGCTTGATAACGGGTTAGCTGTTTGTCCAAGGACGCGGCAGGTGCTGACTCATCAAGAACTCATTCCCAATTACACGGTTAAGGCTATGATAGCGAGTTGGTTGGAGGCAAACAGGATCAACCTTGCTACTAACTCTTGTCATCAGTATGATGGTGGTGATGCTTCATCCATGGCTAATAATATGGGTTCTCAAGACTTTAACCGCACCGAGAGTTTTCGTTTTTCTTTACGGAGCAGCAGTTTAACCTCAAGATCATCTCTTGAAACTGGAAATGGGTTTGAGAAACTGAAGATTAACGTGTCTGCCAGTTTATGCGGGGAATCTCAAAGCAAGGATCTTGAAATATTCGAGCTTTTGTCTCCGGGGCAGTCTTACACTCACAGCAGGAGTGAATCAGTTTGCAGTGTTGTCTCGTCTGTTGATTATGTACCTTCGGTGACACATGAGACAGAAAGTATACTAGGGAATCACCAAAGCTCCAGTGAGATGTCTCCCAAGAAAAACTTAGAAAGTTCAAACAATGTAAATCATGAGCATAGCGCAGCAAAGACTTATGAGTGTTCTGTACATGATTTAGATGATTCAGGAACAATGACGACTTCACATACCATAAAATTGGTAGAAGATCTTAAAAGCGGGTCTAACAAAGTGAAGACTGCTGCTGCAGCTGAAATACGTCATCTCACCATTAACAGCATTGAAAATCGTGTTCACATCGGGCGTTGTGGTGCTATTACTCCACTGCTGTCACTTTTATACTCAGAAGAAAAGCTAACTCAAGAACACGCAGTCACGGCTCTTTTGAATCTTTCCATCAGTGAACTAAACAAAGCCATGATTGTGGAAGTCGGGGCGATAGAACCGCTTGTTCATGTTTTGAACACAGGAAATGACAGAGCCAAAGAGAATTCAGCAGCATCATTGTTCAGTCTGTCTGTTCTGCAGGTCAACAGAGAACGAATAGGCCAGTCTAACGCAGCGATACAAGCTCTGGTGAATCTTCTTGGTAAAGGAACATTTAGAGGAAAGAAAGACGCCGCCTCTGCTTTGTTCAATCTATCGATTACTCATGATAACAAGGCCCGTATCGTGCAAGCTAAGGCGGTTAAGTACCTTGTGGAGCTGTTAGACCCAGATTTAGAGATGGTTGATAAAGCAGTTGCTCTTCTTGCAAATCTTTCTGCAGTTGGAGAAGGGCGTCAAGCCATCGTGAGGGAAGGTGGGATTCCATTACTTGTTGAAACTGTTGACTTAGGATCTCAGAGAGGGAAAGAGAATGCAGCTTCTGTGCTGCTTCAGTTGTGTCTGAACAGTCCCAAGTTTTGCACTCTGGTCTTGCAAGAAGGCGCCATACCTCCGCTTGTTGCCTTGTCTCAGTCTGGTACACAGAGAGCAAAAGAGAAGGCACAGCAACTTCTTAGCCACTTCCGAAACCAGAGAGATGCAAGGATGAAGAAAGGTAGATCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Arm U-box

Protein Analysis

760

Amino Acids

83.78

Weight (kDa)

5.85

Isoelectric Point (pI)

40.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PUB2_N PF25240 2 - 103 4.2e-34 PUB2-like, N-terminal domain
U-box PF04564 202 - 273 1.7e-27 U-box domain
ARM_ARMC5 PF24768 402 - 576 2.7e-07 ARMC5
ARM_PUB PF25598 441 - 713 6.1e-23 Plant U-box protein ARM repeat region
Arm PF00514 469 - 506 3.9e-07 Armadillo/beta-catenin-like repeat
ARM_ARMC5 PF24768 584 - 720 9.7e-07 ARMC5
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 841
Acc36I ACCTGC 2 cut(s) 841, 1747
AccB1I GGYRCC 1 cut(s) 2159
AccI GTMKAC 1 cut(s) 1270
AccII CGCG 1 cut(s) 847
AciI CCGC 8 cut(s) 847, 1015, 1128, 1449, 1676, 1851, 1916, 2171
AclWI GGATC 7 cut(s) 12, 585, 752, 765, 935, 1155, 2077
AcsI RAATTY 1 cut(s) 1720
AcuI CTGAAG 4 cut(s) 329, 759, 1121, 2093
AcyI GRCGYC 3 cut(s) 1848, 2011, 2160
AfaI GTAC 5 cut(s) 381, 1242, 1380, 1925, 2197
AfeI AGCGCT 1 cut(s) 395
AfiI CCNNNNNNNGG 2 cut(s) 229, 2025
AflIII ACRYGT 2 cut(s) 95, 1110
AjnI CCWGG 2 cut(s) 222, 594
AloI GAACNNNNNNTCC 2 cut(s) 96, 128
Alw26I GTCTC 6 cut(s) 401, 1176, 1228, 1253, 1308, 2190
AlwI GGATC 7 cut(s) 12, 585, 752, 765, 935, 1155, 2077
AlwNI CAGNNNCTG 2 cut(s) 856, 2099
Ama87I CYCGRG 1 cut(s) 228
Aor51HI AGCGCT 1 cut(s) 395
AoxI GGCC 3 cut(s) 597, 1777, 1893
ApoI RAATTY 1 cut(s) 1720
AseI ATTAAT 1 cut(s) 437
Asp700I GAANNNNTTC 1 cut(s) 873
AspLEI GCGC 3 cut(s) 396, 1355, 2162
AspS9I GGNCC 2 cut(s) 307, 1894
AsuC2I CCSGG 1 cut(s) 1176
AsuHPI GGTGA 6 cut(s) 243, 980, 1261, 1274, 1489, 1819
AvaI CYCGRG 1 cut(s) 228
AvaII GGWCC 1 cut(s) 307
BaeI ACNNNNGTAYC 2 cut(s) 704, 737
BamHI GGATCC 2 cut(s) 4, 757
BanI GGYRCC 1 cut(s) 2159
BarI GAAGNNNNNNTAC 2 cut(s) 2148, 2180
BbsI GAAGAC 3 cut(s) 17, 207, 1472
BccI CCATC 4 cut(s) 956, 1634, 1951, 2027
BceAI ACGGC 1 cut(s) 1623
BciT130I CCWGG 2 cut(s) 224, 596
BcnI CCSGG 1 cut(s) 1176
BcoDI GTCTC 6 cut(s) 401, 1176, 1228, 1253, 1308, 2190
BfaI CTAG 1 cut(s) 1274
BfmI CTRYAG 3 cut(s) 1476, 1754, 1995
BfoI RGCGCY 2 cut(s) 397, 2163
BfuAI ACCTGC 2 cut(s) 841, 1747
BglII AGATCT 2 cut(s) 547, 1438
Bme1390I CCNGG 3 cut(s) 224, 596, 1176
Bme18I GGWCC 1 cut(s) 307
BmeT110I CYCGRG 1 cut(s) 228
BmgT120I GGNCC 2 cut(s) 307, 1894
BmiI GGNNCC 3 cut(s) 6, 759, 2161
BmrFI CCNGG 3 cut(s) 224, 596, 1176
BmsI GCATC 4 cut(s) 666, 961, 1739, 2245
BpiI GAAGAC 3 cut(s) 17, 207, 1472
BpmI CTGGAG 1 cut(s) 1276
Bpu10I CCTNAGC 1 cut(s) 1911
BpuEI CTTGAG 3 cut(s) 987, 1045, 1575
BpuMI CCSGG 1 cut(s) 1176
Bsa29I ATCGAT 1 cut(s) 1874
BsaBI GATNNNNATC 2 cut(s) 498, 535
BsaHI GRCGYC 3 cut(s) 1848, 2011, 2160
BsaJI CCNNGG 4 cut(s) 594, 839, 981, 1175
BsaWI WCCGGW 3 cut(s) 364, 726, 760
BsaXI ACNNNNNCTCC 4 cut(s) 1036, 1066, 1274, 1304
Bsc4I CCNNNNNNNGG 2 cut(s) 229, 2025
Bse1I ACTGG 6 cut(s) 251, 600, 1084, 1119, 1293, 1780
Bse8I GATNNNNATC 2 cut(s) 498, 535
BseBI CCWGG 2 cut(s) 224, 596
BseCI ATCGAT 1 cut(s) 1874
BseDI CCNNGG 4 cut(s) 594, 839, 981, 1175
BseGI GGATG 5 cut(s) 200, 657, 797, 977, 2268
BseJI GATNNNNATC 2 cut(s) 498, 535
BseLI CCNNNNNNNGG 2 cut(s) 229, 2025
BseMII CTCAG 5 cut(s) 402, 672, 1587, 2087, 2201
BseNI ACTGG 6 cut(s) 251, 600, 1084, 1119, 1293, 1780
BsgI GTGCAG 1 cut(s) 422
Bsh1236I CGCG 1 cut(s) 847
BshFI GGCC 3 cut(s) 599, 1779, 1895
BshNI GGYRCC 1 cut(s) 2159
BshVI ATCGAT 1 cut(s) 1874
BsiHKCI CYCGRG 1 cut(s) 228
BsiSI CCGG 4 cut(s) 365, 727, 761, 1175
BslFI GGGAC 2 cut(s) 445, 2112
BslI CCNNNNNNNGG 2 cut(s) 229, 2025
BsmAI GTCTC 6 cut(s) 401, 1176, 1228, 1253, 1308, 2190
BsmFI GGGAC 2 cut(s) 445, 2112
BsmI GAATGC 2 cut(s) 460, 2095
BsnI GGCC 3 cut(s) 599, 1779, 1895
BsoBI CYCGRG 1 cut(s) 228
Bsp1407I TGTACA 1 cut(s) 1378
Bsp19I CCATGG 1 cut(s) 981
BspACI CCGC 8 cut(s) 847, 1015, 1128, 1449, 1676, 1851, 1916, 2171
BspANI GGCC 3 cut(s) 599, 1779, 1895
BspCNI CTCAG 5 cut(s) 403, 673, 1586, 2086, 2200
BspDI ATCGAT 1 cut(s) 1874
BspFNI CGCG 1 cut(s) 847
BspHI TCATGA 3 cut(s) 1342, 1882, 2279
BspLI GGNNCC 3 cut(s) 6, 759, 2161
BspMAI CTGCAG 3 cut(s) 1480, 1758, 1999
BspMI ACCTGC 2 cut(s) 841, 1747
BspPI GGATC 7 cut(s) 12, 585, 752, 765, 935, 1155, 2077
BspQI GCTCTTC 1 cut(s) 1983
BspT107I GGYRCC 1 cut(s) 2159
BsrGI TGTACA 1 cut(s) 1378
BsrI ACTGG 6 cut(s) 251, 600, 1084, 1119, 1293, 1780
BssECI CCNNGG 4 cut(s) 594, 839, 981, 1175
BssNAI GTATAC 1 cut(s) 1271
BssNI GRCGYC 3 cut(s) 1848, 2011, 2160
BssT1I CCWWGG 2 cut(s) 839, 981
Bst1107I GTATAC 1 cut(s) 1271
Bst2UI CCWGG 2 cut(s) 224, 596
Bst4CI ACNGT 9 cut(s) 35, 138, 182, 357, 571, 636, 889, 2059, 2126
Bst6I CTCTTC 1 cut(s) 1983
BstACI GRCGYC 3 cut(s) 1848, 2011, 2160
BstAUI TGTACA 1 cut(s) 1378
BstC8I GCNNGC 3 cut(s) 64, 401, 1908
BstDSI CCRYGG 1 cut(s) 981
BstEII GGTNACC 1 cut(s) 249
BstF5I GGATG 5 cut(s) 200, 657, 797, 977, 2268
BstFNI CGCG 1 cut(s) 847
BstH2I RGCGCY 2 cut(s) 397, 2163
BstHHI GCGC 3 cut(s) 396, 1355, 2162
BstMAI GTCTC 6 cut(s) 401, 1176, 1228, 1253, 1308, 2190
BstMWI GCNNNNNNNGC 8 cut(s) 400, 853, 902, 1478, 1607, 1799, 1856, 1982
BstNI CCWGG 2 cut(s) 224, 596
BstNSI RCATGY 2 cut(s) 99, 673
BstPI GGTNACC 1 cut(s) 249
BstSCI CCNGG 3 cut(s) 222, 594, 1174
BstSFI CTRYAG 3 cut(s) 1476, 1754, 1995
BstUI CGCG 1 cut(s) 847
BstV2I GAAGAC 3 cut(s) 17, 207, 1472
BstX2I RGATCY 7 cut(s) 4, 547, 590, 757, 1147, 1438, 2069
BstXI CCANNNNNNTGG 2 cut(s) 1429, 1654
BstYI RGATCY 7 cut(s) 4, 547, 590, 757, 1147, 1438, 2069
BstZ17I GTATAC 1 cut(s) 1271
Bsu15I ATCGAT 1 cut(s) 1874
BsuRI GGCC 3 cut(s) 599, 1779, 1895
BsuTUI ATCGAT 1 cut(s) 1874
BtgI CCRYGG 1 cut(s) 981
BtsCI GGATG 5 cut(s) 200, 657, 797, 977, 2268
BtsI GCAGTG 2 cut(s) 1222, 1553
BtsIMutI CAGTG 4 cut(s) 1222, 1300, 1553, 1636
BveI ACCTGC 2 cut(s) 841, 1747
Cac8I GCNNGC 3 cut(s) 64, 401, 1908
CaiI CAGNNNCTG 2 cut(s) 856, 2099
CciI TCATGA 3 cut(s) 1342, 1882, 2279
CfoI GCGC 3 cut(s) 396, 1355, 2162
Cfr13I GGNCC 2 cut(s) 307, 1894
ClaI ATCGAT 1 cut(s) 1874
CseI GACGC 3 cut(s) 853, 1856, 2000
Csp6I GTAC 5 cut(s) 380, 1241, 1379, 1924, 2196
CviQI GTAC 5 cut(s) 380, 1241, 1379, 1924, 2196
DinI GGCGCC 1 cut(s) 2161
Eam1104I CTCTTC 1 cut(s) 1983
EarI CTCTTC 1 cut(s) 1983
Eco130I CCWWGG 2 cut(s) 839, 981
Eco32I GATATC 1 cut(s) 537
Eco47I GGWCC 1 cut(s) 307
Eco47III AGCGCT 1 cut(s) 395
Eco57I CTGAAG 4 cut(s) 329, 759, 1121, 2093
Eco88I CYCGRG 1 cut(s) 228
Eco91I GGTNACC 1 cut(s) 249
EcoO65I GGTNACC 1 cut(s) 249
EcoRI GAATTC 1 cut(s) 1720
EcoRII CCWGG 2 cut(s) 222, 594
EcoRV GATATC 1 cut(s) 537
EcoT14I CCWWGG 2 cut(s) 839, 981
EgeI GGCGCC 1 cut(s) 2161
EheI GGCGCC 1 cut(s) 2161
ErhI CCWWGG 2 cut(s) 839, 981
FalI AAGNNNNNCTT 2 cut(s) 1301, 1333
FaqI GGGAC 2 cut(s) 445, 2112
FauI CCCGC 2 cut(s) 1121, 1442
FblI GTMKAC 1 cut(s) 1270
FokI GGATG 5 cut(s) 207, 644, 784, 964, 2275
FspBI CTAG 1 cut(s) 1274
GlaI GCGC 3 cut(s) 395, 1354, 2161
GsuI CTGGAG 1 cut(s) 1276
HaeII RGCGCY 2 cut(s) 397, 2163
HaeIII GGCC 3 cut(s) 599, 1779, 1895
HapII CCGG 4 cut(s) 365, 727, 761, 1175
HgaI GACGC 3 cut(s) 853, 1856, 2000
HhaI GCGC 3 cut(s) 396, 1355, 2162
Hin1I GRCGYC 3 cut(s) 1848, 2011, 2160
Hin6I GCGC 3 cut(s) 394, 1353, 2160
HinP1I GCGC 3 cut(s) 394, 1353, 2160
HincII GTYRAC 4 cut(s) 220, 741, 1762, 2062
HindII GTYRAC 4 cut(s) 220, 741, 1762, 2062
HpaI GTTAAC 1 cut(s) 220
HpaII CCGG 4 cut(s) 365, 727, 761, 1175
HphI GGTGA 6 cut(s) 243, 980, 1261, 1274, 1489, 1819
Hpy166II GTNNAC 9 cut(s) 220, 665, 741, 1271, 1525, 1634, 1762, 2062, 2198
Hpy188I TCNGA 7 cut(s) 175, 471, 610, 1576, 2076, 2121, 2243
Hpy8I GTNNAC 9 cut(s) 220, 665, 741, 1271, 1525, 1634, 1762, 2062, 2198
HpyAV CCTTC 6 cut(s) 180, 1254, 2000, 2024, 2150, 2209
HpyCH4III ACNGT 9 cut(s) 35, 138, 182, 357, 571, 636, 889, 2059, 2126
HpyCH4IV ACGT 2 cut(s) 1110, 1489
HpyF10VI GCNNNNNNNGC 8 cut(s) 400, 853, 902, 1478, 1607, 1799, 1856, 1982
HpySE526I ACGT 2 cut(s) 1110, 1489
Hsp92I GRCGYC 3 cut(s) 1848, 2011, 2160
HspAI GCGC 3 cut(s) 394, 1353, 2160
KasI GGCGCC 1 cut(s) 2159
KspAI GTTAAC 1 cut(s) 220
LguI GCTCTTC 1 cut(s) 1983
LmnI GCTCC 3 cut(s) 1044, 1295, 1933
LweI GCATC 4 cut(s) 666, 961, 1739, 2245
MaeI CTAG 1 cut(s) 1274
MaeII ACGT 2 cut(s) 1110, 1489
MaeIII GTNAC 5 cut(s) 249, 367, 1249, 1560, 1603
MflI RGATCY 7 cut(s) 4, 547, 590, 757, 1147, 1438, 2069
MluCI AATT 4 cut(s) 516, 880, 1427, 1720
Mly113I GGCGCC 1 cut(s) 2160
MlyI GAGTC 1 cut(s) 853
MmeI TCCRAC 3 cut(s) 303, 894, 1981
MroXI GAANNNNTTC 1 cut(s) 873
MslI CAYNNNNRTG 3 cut(s) 569, 957, 1652
MspA1I CMGCKG 1 cut(s) 1481
MspI CCGG 4 cut(s) 365, 727, 761, 1175
MspR9I CCNGG 3 cut(s) 224, 596, 1176
Mva1269I GAATGC 2 cut(s) 460, 2095
MvaI CCWGG 2 cut(s) 224, 596
MvnI CGCG 1 cut(s) 847
MwoI GCNNNNNNNGC 8 cut(s) 400, 853, 902, 1478, 1607, 1799, 1856, 1982
NarI GGCGCC 1 cut(s) 2160
NciI CCSGG 1 cut(s) 1176
NcoI CCATGG 1 cut(s) 981
NlaIV GGNNCC 3 cut(s) 6, 759, 2161
NmuCI GTSAC 4 cut(s) 249, 1249, 1560, 1603
NspI RCATGY 2 cut(s) 99, 673
PagI TCATGA 3 cut(s) 1342, 1882, 2279
PaqCI CACCTGC 1 cut(s) 841
PciI ACATGT 1 cut(s) 95
PciSI GCTCTTC 1 cut(s) 1983
PcsI WCGNNNNNNNCGW 1 cut(s) 716
PctI GAATGC 2 cut(s) 460, 2095
PdmI GAANNNNTTC 1 cut(s) 873
PfeI GAWTC 9 cut(s) 209, 466, 1133, 1205, 1279, 1394, 1618, 1810, 2038
PleI GAGTC 1 cut(s) 853
PluTI GGCGCC 1 cut(s) 2163
PpsI GAGTC 1 cut(s) 853
PscI ACATGT 1 cut(s) 95
PshBI ATTAAT 1 cut(s) 437
Psp6I CCWGG 2 cut(s) 222, 594
PspEI GGTNACC 1 cut(s) 249
PspGI CCWGG 2 cut(s) 222, 594
PspN4I GGNNCC 3 cut(s) 6, 759, 2161
PspPI GGNCC 2 cut(s) 307, 1894
PstI CTGCAG 3 cut(s) 1480, 1758, 1999
PstNI CAGNNNCTG 2 cut(s) 856, 2099
PsuI RGATCY 7 cut(s) 4, 547, 590, 757, 1147, 1438, 2069
PvuII CAGCTG 1 cut(s) 1481
RsaI GTAC 5 cut(s) 381, 1242, 1380, 1925, 2197
RsaNI GTAC 5 cut(s) 380, 1241, 1379, 1924, 2196
RseI CAYNNNNRTG 3 cut(s) 569, 957, 1652
SapI GCTCTTC 1 cut(s) 1983
Sau96I GGNCC 2 cut(s) 307, 1894
SchI GAGTC 1 cut(s) 853
ScrFI CCNGG 3 cut(s) 224, 596, 1176
SfaNI GCATC 4 cut(s) 666, 961, 1739, 2245
SfcI CTRYAG 3 cut(s) 1476, 1754, 1995
SfoI GGCGCC 1 cut(s) 2161
SinI GGWCC 1 cut(s) 307
SmiMI CAYNNNNRTG 3 cut(s) 569, 957, 1652
SmlI CTYRAG 3 cut(s) 1002, 1060, 1590
SmoI CTYRAG 3 cut(s) 1002, 1060, 1590
Sse9I AATT 4 cut(s) 516, 880, 1427, 1720
SsiI CCGC 8 cut(s) 847, 1015, 1128, 1449, 1676, 1851, 1916, 2171
SspDI GGCGCC 1 cut(s) 2159
SspI AATATT 1 cut(s) 1158
SspMI CTAG 1 cut(s) 1274
StyD4I CCNGG 3 cut(s) 222, 594, 1174
StyI CCWWGG 2 cut(s) 839, 981
TaaI ACNGT 9 cut(s) 35, 138, 182, 357, 571, 636, 889, 2059, 2126
TaiI ACGT 2 cut(s) 1113, 1492
TaqI TCGA 5 cut(s) 19, 144, 710, 1161, 1874
TasI AATT 4 cut(s) 516, 880, 1427, 1720
TatI WGTACW 1 cut(s) 1378
TauI GCSGC 2 cut(s) 850, 1853
TfiI GAWTC 9 cut(s) 209, 466, 1133, 1205, 1279, 1394, 1618, 1810, 2038
TscAI CASTG 4 cut(s) 1222, 1300, 1560, 1636
TseFI GTSAC 4 cut(s) 249, 1249, 1560, 1603
Tsp45I GTSAC 4 cut(s) 249, 1249, 1560, 1603
TspDTI ATGAA 5 cut(s) 41, 162, 966, 1673, 2279
TspGWI ACGGA 3 cut(s) 478, 650, 1057
TspRI CASTG 4 cut(s) 1222, 1300, 1560, 1636
VpaK11BI GGWCC 1 cut(s) 307
VspI ATTAAT 1 cut(s) 437
XapI RAATTY 1 cut(s) 1720
XceI RCATGY 2 cut(s) 99, 673
XmiI GTMKAC 1 cut(s) 1270
XmnI GAANNNNTTC 1 cut(s) 873
XspI CTAG 1 cut(s) 1274
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.