Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0005506

Physical Location & Seq

Genomic Coordinates Forward (+)

31148555 .. 31160923

Gene Structure 12369 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0193500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2007 bp

ATGAAGCCCAACTCCAAGAATCAGCAACAGAGGAAATGGGCTGAACTGTGTTGTTTGGATTGGTCATGCATACAGCTGTTCTGGCCCAGAGTTGTGATGCGCAAATGGCTCAACATCTCCGCCAAAGAGTCCGATTACAGCGCCGATACCGAAGACGAAGACGACTGGGATCCTGACTCCCCAACAAGCCAGCAAGATTTTGGTCAGCGGGGAAGAGGATCAAGGTTTAAAGATATCAAAGAGGATGAGTCTGAGGATGATGACGACCTTGATGATCTTCCTCGAGTACGAAGACGAAAATCAGAGACCTTTAGAACACAGTATATAAATACAAAGGAACTCAGAATATGTGTTGGTACATGGAATGTTGGAGGACAGACTCCACCCGATGACTTGGATATTGATGGTTGGCTAGATATCAATGACCCAGCCGACATCTATGTAATTGGTCTTCAGGAGATCGTACCACTCAATGCTGGGAATATATTTGGTGCCGAAGATAGCCGGCCAGTTAGTAAGTGGGAAAATGTCATCCGTGAAACGCTGGATAGATGTCGACCTGCGGCCAACAAGGTTAAATCCTTTAGTGATCCTCCATCACCCTCAAAATTTAGGCCATCTGATGATGTCCCTTATATGGAAGAGGAGATATTAGATGAAAGTGATAGTGATATTGGCAATGAAGTCCATCCATTGGATGACGAACCCAAAGATTTTGGTGTCAGCAATGGTACATCAGTCACAAGCAAAACAGTGAATGTTGATGGTCCTGTTTCTAACTTTACTGATAGTACTAAACCGGGGATGCCAATTGGAGAGGATTTACAGAGGCAACATTCTTCTCCAAAGAGATTAGATAGGTTATATTGCCTTCGGCCAGATGATTGTCCATTAGATGAAGACACTTCTGCTGTCCAACATAATGGCAAGTTAACCAAAATGCCTAGTGGGTCTGAAAGAATTGGTTTGAACTGGCCGGAGCGTCCATTGAACTTGCTATCTCAGCACTTATTAGAGCGACGAAATTCCTTTAGACCAACGAAGTCTTTCAAGTCCTCAAAATCTTTCAGGACGCACAATTCTTTCAAGTCAGCTGCAAATGACATGGCACCAGAATTAGCTTTGCTTGGAGAGATTGATCTTGAATCTCTCATGAAACGGGAACGAAGACCATCATATGTAAGGATAGTAAGTAAGCAGATGGTTGGGATTTTCCTAACTGTATGGGTTCGTAGGAGCTTACGTAAACACATTCAGAACTTAAAGGTGTCAACTGTTGGTGTTGGTGTTATGGGATACATTGGTAACAAGGGATCTGTATCTGTGAGTATGTCCATATATCAGACACTGTTTTGTTTCGTGTGCACTCACCTGACAGCAGGTGAAAGGGAGGTAGATGAATCAAAAAGAAATGCTGATGTGCATGAAATTCATCGGAGAACTCACTTTCATTCGTTTTCTGGTATTGGGCTTCCGAAAAGTATCCATGACCATGAAAGAATAATTTGGTTGGGTGATCTAAATTATCGTATCAACTTGTCATATGAGAAAACACAAGAACTTATCTCCAAAAAAGAGTGGTCCCAGTTGGCTGAGAAGGACCAGCTTGCACGACAATTTAAAAAAGGTCATGCATTTGATGGATGGTCTGAGGGTGTTCTAAATTTCCCGCCAACGTATAAGTATGAGATGAATTCAGACAAGTATTATGGAGAGGATCCAAAGGGTGGAAGGCGGACTCCAGCATGGTGTGACCGCATTCTTTCATATGGCCGAGGAATGAGGTTACTGCAGTATAGAAGGATTGAACATAAATTTTCTGATCATCGACCAGTGACTGCTACTTATATGGCAGAGGTTGAGGTTTTTTCTGCTAGGAAGCTTCAGCGGGCCCTCACATTCACTGATGCAGAGATTGAAAATGAGGAAATTGCAACAGATATGGGTATTGATGTTGGAATGAACAACTTAAAATTGGAACAGGGTATATCTGATTGGGATCGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arm U-box

Protein Analysis

668

Amino Acids

76.7

Weight (kDa)

5.72

Isoelectric Point (pI)

48.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Exo_endo_phos2	PF22669	119 - 184	4.9e-07	Endonuclease/Exonuclease/phosphatase family 2
Exo_endo_phos2	PF22669	381 - 614	6.3e-67	Endonuclease/Exonuclease/phosphatase family 2

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005506)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G54790 AT3G54790 AT3G54790
fragaria_vesca	FvH4_2g21330 FvH4_2g21330 FvH4_2g21330 FvH4_2g21330
malus_domestica	MD05G1196000.v1.1 MD10G1183200.v1.1
prunus_persica	Prupe.8G222400_v2.0.a1 Prupe.8G222400_v2.0.a1 Prupe.8G222400_v2.0.a1 Prupe.8G222400_v2.0.a1 Prupe.8G222400_v2.0.a1
pyrus_communis	pycom05g18300 pycom10g15830
rosa_chinensis	RchiOBHm_Chr6g0287911
rosa_laevigata	RLG00000012456
rosa_multiflora	Rmu_sc0000042.1_g000006
rosa_roxburghii	Rroxscaffold_7G00180670 Rroxscaffold_7G00180880
rosa_rugosa	Rorug06G0193500 Rorug06G0193500
rosa_samantha	Rh6AG302600 Rh6BG308800 Rh6CG300900 Rh6CG316500 Rh6DG301200
rosa_wichuraiana	Rw6G026150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1370
Acc16I	TGCGCA	1 cut(s)	101
Acc36I	ACCTGC	2 cut(s)	568, 1370
AccB1I	GGYRCC	2 cut(s)	491, 1108
AccB7I	CCANNNNNTGG	2 cut(s)	694, 1727
AccI	GTMKAC	1 cut(s)	556
AciI	CCGC	7 cut(s)	120, 208, 563, 1670, 1735, 1756, 1888
AclWI	GGATC	7 cut(s)	164, 177, 226, 584, 1321, 1712, 1725
AcoI	YGGCCR	5 cut(s)	506, 564, 875, 974, 1771
AcsI	RAATTY	6 cut(s)	608, 1024, 1428, 1663, 1693, 1814
AcuI	CTGAAG	2 cut(s)	437, 1868
AfaI	GTAC	5 cut(s)	288, 358, 465, 733, 793
AfiI	CCNNNNNNNGG	3 cut(s)	637, 694, 1727
AgsI	TTSAA	7 cut(s)	970, 991, 1051, 1087, 1145, 1808, 1919
AluBI	AGCT	6 cut(s)	76, 1094, 1121, 1239, 1606, 1882
AluI	AGCT	6 cut(s)	76, 1094, 1121, 1239, 1606, 1882
Alw21I	GWGCWC	1 cut(s)	1367
Alw26I	GTCTC	1 cut(s)	299
Alw44I	GTGCAC	1 cut(s)	1363
AlwI	GGATC	7 cut(s)	164, 177, 226, 584, 1321, 1712, 1725
AlwNI	CAGNNNCTG	2 cut(s)	1348, 1838
Ama87I	CYCGRG	1 cut(s)	282
AoxI	GGCC	8 cut(s)	83, 506, 564, 614, 875, 974, 1771, 1890
ApaI	GGGCCC	1 cut(s)	1894
ApaLI	GTGCAC	1 cut(s)	1363
ApeKI	GCWGC	1 cut(s)	1094
ApoI	RAATTY	6 cut(s)	608, 1024, 1428, 1663, 1693, 1814
Asp700I	GAANNNNTTC	1 cut(s)	1046
AspLEI	GCGC	2 cut(s)	102, 143
AspS9I	GGNCC	6 cut(s)	84, 767, 1581, 1600, 1890, 1891
AsuC2I	CCSGG	1 cut(s)	801
AsuHPI	GGTGA	4 cut(s)	591, 1361, 1394, 1526
AvaI	CYCGRG	1 cut(s)	282
AvaII	GGWCC	3 cut(s)	767, 1581, 1600
BaeGI	GKGCMC	2 cut(s)	1367, 1894
BaeI	ACNNNNGTAYC	4 cut(s)	723, 756, 1288, 1321
BamHI	GGATCC	2 cut(s)	169, 1717
BanI	GGYRCC	2 cut(s)	491, 1108
BanII	GRGCYC	1 cut(s)	1894
BarI	GAAGNNNNNNTAC	2 cut(s)	435, 467
BbsI	GAAGAC	6 cut(s)	159, 165, 298, 443, 906, 1174
Bbv12I	GWGCWC	1 cut(s)	1367
BbvI	GCAGC	1 cut(s)	1081
BccI	CCATC	9 cut(s)	398, 604, 625, 696, 758, 1180, 1195, 1634, 1638
BciVI	GTATCC	2 cut(s)	1289, 1493
BclI	TGATCA	1 cut(s)	1822
BcnI	CCSGG	1 cut(s)	801
BcoDI	GTCTC	1 cut(s)	299
BfaI	CTAG	3 cut(s)	413, 945, 1875
BfmI	CTRYAG	1 cut(s)	1790
BfoI	RGCGCY	1 cut(s)	144
BfuAI	ACCTGC	2 cut(s)	568, 1370
BfuI	GTATCC	2 cut(s)	1289, 1493
BisI	GCNGC	2 cut(s)	564, 1095
BlsI	GCNGC	2 cut(s)	565, 1096
BmcAI	AGTACT	1 cut(s)	793
Bme1390I	CCNGG	1 cut(s)	801
Bme18I	GGWCC	3 cut(s)	767, 1581, 1600
BmeT110I	CYCGRG	1 cut(s)	282
BmgT120I	GGNCC	6 cut(s)	84, 767, 1581, 1600, 1890, 1891
BmiI	GGNNCC	6 cut(s)	171, 493, 1110, 1583, 1719, 1892
BmrFI	CCNGG	1 cut(s)	801
BmrI	ACTGGG	2 cut(s)	175, 1579
BmsI	GCATC	3 cut(s)	87, 795, 1897
BmuI	ACTGGG	2 cut(s)	175, 1579
BpiI	GAAGAC	6 cut(s)	159, 165, 298, 443, 906, 1174
BpmI	CTGGAG	1 cut(s)	1725
BpuMI	CCSGG	1 cut(s)	801
BsaAI	YACGTR	1 cut(s)	1244
BsaBI	GATNNNNATC	2 cut(s)	1318, 1998
BsaI	GGTCTC	1 cut(s)	299
BsaJI	CCNNGG	2 cut(s)	800, 1774
BsaXI	ACNNNNNCTCC	2 cut(s)	1228, 1258
Bsc4I	CCNNNNNNNGG	3 cut(s)	637, 694, 1727
Bse118I	RCCGGY	1 cut(s)	504
Bse1I	ACTGG	5 cut(s)	170, 509, 977, 1585, 1832
Bse3DI	GCAATG	2 cut(s)	685, 733
Bse8I	GATNNNNATC	2 cut(s)	1318, 1998
BseDI	CCNNGG	2 cut(s)	800, 1774
BseGI	GGATG	7 cut(s)	250, 262, 531, 688, 703, 810, 1649
BseJI	GATNNNNATC	2 cut(s)	1318, 1998
BseLI	CCNNNNNNNGG	3 cut(s)	637, 694, 1727
BseMI	GCAATG	2 cut(s)	685, 733
BseMII	CTCAG	5 cut(s)	243, 355, 1016, 1584, 1641
BseNI	ACTGG	5 cut(s)	170, 509, 977, 1585, 1832
BseRI	GAGGAG	1 cut(s)	659
BseSI	GKGCMC	2 cut(s)	1367, 1894
BseXI	GCAGC	1 cut(s)	1081
BseYI	CCCAGC	2 cut(s)	427, 476
BshFI	GGCC	8 cut(s)	85, 508, 566, 616, 877, 976, 1773, 1892
BshNI	GGYRCC	2 cut(s)	491, 1108
BsiHKAI	GWGCWC	1 cut(s)	1367
BsiHKCI	CYCGRG	1 cut(s)	282
BsiSI	CCGG	3 cut(s)	505, 800, 977
BslFI	GGGAC	2 cut(s)	614, 1567
BslI	CCNNNNNNNGG	3 cut(s)	637, 694, 1727
BsmAI	GTCTC	1 cut(s)	299
BsmFI	GGGAC	2 cut(s)	614, 1567
BsmI	GAATGC	1 cut(s)	1758
BsnI	GGCC	8 cut(s)	85, 508, 566, 616, 877, 976, 1773, 1892
Bso31I	GGTCTC	1 cut(s)	299
BsoBI	CYCGRG	1 cut(s)	282
Bsp120I	GGGCCC	1 cut(s)	1890
Bsp1286I	GDGCHC	2 cut(s)	1367, 1894
BspACI	CCGC	7 cut(s)	120, 208, 563, 1670, 1735, 1756, 1888
BspANI	GGCC	8 cut(s)	85, 508, 566, 616, 877, 976, 1773, 1892
BspCNI	CTCAG	5 cut(s)	244, 354, 1015, 1585, 1642
BspHI	TCATGA	1 cut(s)	1152
BspLI	GGNNCC	6 cut(s)	171, 493, 1110, 1583, 1719, 1892
BspMAI	CTGCAG	1 cut(s)	1794
BspMI	ACCTGC	2 cut(s)	568, 1370
BspPI	GGATC	7 cut(s)	164, 177, 226, 584, 1321, 1712, 1725
BspT107I	GGYRCC	2 cut(s)	491, 1108
BspTNI	GGTCTC	1 cut(s)	299
BsrDI	GCAATG	2 cut(s)	685, 733
BsrFI	RCCGGY	1 cut(s)	504
BsrI	ACTGG	5 cut(s)	170, 509, 977, 1585, 1832
BssAI	RCCGGY	1 cut(s)	504
BssECI	CCNNGG	2 cut(s)	800, 1774
Bst4CI	ACNGT	6 cut(s)	48, 321, 754, 1222, 1276, 1350
Bst6I	CTCTTC	2 cut(s)	208, 636
BstBAI	YACGTR	1 cut(s)	1244
BstC8I	GCNNGC	4 cut(s)	191, 506, 1608, 1890
BstDEI	CTNAG	5 cut(s)	252, 341, 1002, 1593, 1650
BstF5I	GGATG	7 cut(s)	250, 262, 531, 688, 703, 810, 1649
BstH2I	RGCGCY	1 cut(s)	144
BstHHI	GCGC	2 cut(s)	102, 143
BstMAI	GTCTC	1 cut(s)	299
BstMWI	GCNNNNNNNGC	3 cut(s)	82, 106, 1003
BstSCI	CCNGG	1 cut(s)	799
BstSFI	CTRYAG	1 cut(s)	1790
BstSLI	GKGCMC	2 cut(s)	1367, 1894
BstSNI	TACGTA	1 cut(s)	1244
BstV1I	GCAGC	1 cut(s)	1081
BstV2I	GAAGAC	6 cut(s)	159, 165, 298, 443, 906, 1174
BstX2I	RGATCY	3 cut(s)	169, 1313, 1717
BstXI	CCANNNNNNTGG	1 cut(s)	923
BstYI	RGATCY	3 cut(s)	169, 1313, 1717
BsuI	GTATCC	2 cut(s)	1289, 1493
BsuRI	GGCC	8 cut(s)	85, 508, 566, 616, 877, 976, 1773, 1892
BtsCI	GGATG	7 cut(s)	250, 262, 531, 688, 703, 810, 1649
BtsIMutI	CAGTG	4 cut(s)	759, 1346, 1839, 1902
BveI	ACCTGC	2 cut(s)	568, 1370
Cac8I	GCNNGC	4 cut(s)	191, 506, 1608, 1890
CaiI	CAGNNNCTG	2 cut(s)	1348, 1838
CciI	TCATGA	1 cut(s)	1152
CfoI	GCGC	2 cut(s)	102, 143
Cfr10I	RCCGGY	1 cut(s)	504
Cfr13I	GGNCC	6 cut(s)	84, 767, 1581, 1600, 1890, 1891
CseI	GACGC	2 cut(s)	971, 1081
Csp6I	GTAC	5 cut(s)	287, 357, 464, 732, 792
CviAII	CATG	9 cut(s)	66, 360, 1105, 1153, 1424, 1487, 1493, 1631, 1746
CviQI	GTAC	5 cut(s)	287, 357, 464, 732, 792
DdeI	CTNAG	5 cut(s)	252, 341, 1002, 1593, 1650
DraI	TTTAAA	2 cut(s)	229, 1621
EaeI	YGGCCR	5 cut(s)	506, 564, 875, 974, 1771
Eam1104I	CTCTTC	2 cut(s)	208, 636
EarI	CTCTTC	2 cut(s)	208, 636
EciI	GGCGGA	2 cut(s)	109, 1750
Eco105I	TACGTA	1 cut(s)	1244
Eco24I	GRGCYC	1 cut(s)	1894
Eco31I	GGTCTC	1 cut(s)	299
Eco32I	GATATC	2 cut(s)	235, 418
Eco47I	GGWCC	3 cut(s)	767, 1581, 1600
Eco57I	CTGAAG	2 cut(s)	437, 1868
Eco88I	CYCGRG	1 cut(s)	282
EcoO109I	RGGNCCY	1 cut(s)	1891
EcoRI	GAATTC	1 cut(s)	1693
EcoRV	GATATC	2 cut(s)	235, 418
EcoT22I	ATGCAT	2 cut(s)	71, 1636
EcoT38I	GRGCYC	1 cut(s)	1894
FaeI	CATG	9 cut(s)	69, 363, 1108, 1156, 1427, 1490, 1496, 1634, 1749
FaqI	GGGAC	2 cut(s)	614, 1567
FatI	CATG	9 cut(s)	65, 359, 1104, 1152, 1423, 1486, 1492, 1630, 1745
FauI	CCCGC	3 cut(s)	201, 1677, 1881
FauNDI	CATATG	3 cut(s)	1177, 1543, 1768
FbaI	TGATCA	1 cut(s)	1822
FblI	GTMKAC	1 cut(s)	556
Fnu4HI	GCNGC	2 cut(s)	564, 1095
FokI	GGATG	7 cut(s)	257, 269, 518, 675, 710, 817, 1656
FriOI	GRGCYC	1 cut(s)	1894
Fsp4HI	GCNGC	2 cut(s)	564, 1095
FspBI	CTAG	3 cut(s)	413, 945, 1875
FspI	TGCGCA	1 cut(s)	101
GlaI	GCGC	2 cut(s)	101, 142
GluI	GCNGC	2 cut(s)	564, 1095
GsaI	CCCAGC	2 cut(s)	431, 480
GsuI	CTGGAG	1 cut(s)	1725
HaeII	RGCGCY	1 cut(s)	144
HaeIII	GGCC	8 cut(s)	85, 508, 566, 616, 877, 976, 1773, 1892
HapII	CCGG	3 cut(s)	505, 800, 977
HgaI	GACGC	2 cut(s)	971, 1081
HhaI	GCGC	2 cut(s)	102, 143
Hin1II	CATG	9 cut(s)	69, 363, 1108, 1156, 1427, 1490, 1496, 1634, 1749
Hin6I	GCGC	2 cut(s)	100, 141
HinP1I	GCGC	2 cut(s)	100, 141
HincII	GTYRAC	3 cut(s)	557, 933, 1272
HindII	GTYRAC	3 cut(s)	557, 933, 1272
HindIII	AAGCTT	1 cut(s)	1880
HinfI	GANTC	8 cut(s)	19, 128, 176, 248, 379, 1145, 1400, 1738
HpaI	GTTAAC	1 cut(s)	933
HpaII	CCGG	3 cut(s)	505, 800, 977
HphI	GGTGA	4 cut(s)	591, 1361, 1394, 1526
Hpy166II	GTNNAC	5 cut(s)	557, 933, 1247, 1272, 1365
Hpy188III	TCNNGA	5 cut(s)	173, 455, 1069, 1142, 1153
Hpy8I	GTNNAC	5 cut(s)	557, 933, 1247, 1272, 1365
Hpy99I	CGWCG	1 cut(s)	1023
HpyAV	CCTTC	4 cut(s)	881, 1591, 1725, 1794
HpyCH4III	ACNGT	6 cut(s)	48, 321, 754, 1222, 1276, 1350
HpyCH4IV	ACGT	2 cut(s)	1243, 1676
HpyCH4V	TGCA	9 cut(s)	69, 1097, 1365, 1423, 1610, 1634, 1792, 1910, 1934
HpyF10VI	GCNNNNNNNGC	3 cut(s)	82, 106, 1003
HpyF3I	CTNAG	5 cut(s)	252, 341, 1002, 1593, 1650
HpySE526I	ACGT	2 cut(s)	1243, 1676
Hsp92II	CATG	9 cut(s)	69, 363, 1108, 1156, 1427, 1490, 1496, 1634, 1749
HspAI	GCGC	2 cut(s)	100, 141
KroI	GCCGGC	1 cut(s)	504
KroNI	GCCGGC	1 cut(s)	506
Ksp22I	TGATCA	1 cut(s)	1822
KspAI	GTTAAC	1 cut(s)	933
LmnI	GCTCC	2 cut(s)	979, 1236
Lsp1109I	GCAGC	1 cut(s)	1081
LweI	GCATC	3 cut(s)	87, 795, 1897
MaeI	CTAG	3 cut(s)	413, 945, 1875
MaeII	ACGT	2 cut(s)	1243, 1676
MaeIII	GTNAC	5 cut(s)	739, 1304, 1751, 1785, 1834
MfeI	CAATTG	1 cut(s)	810
MflI	RGATCY	3 cut(s)	169, 1313, 1717
MhlI	GDGCHC	2 cut(s)	1367, 1894
MlyI	GAGTC	5 cut(s)	137, 170, 257, 373, 1732
MmeI	TCCRAC	3 cut(s)	349, 940, 1936
Mph1103I	ATGCAT	2 cut(s)	71, 1636
MroNI	GCCGGC	1 cut(s)	504
MroXI	GAANNNNTTC	1 cut(s)	1046
MseI	TTAA	7 cut(s)	228, 576, 932, 1262, 1620, 1970, 2005
MslI	CAYNNNNRTG	1 cut(s)	1491
MspA1I	CMGCKG	4 cut(s)	76, 208, 1094, 1888
MspI	CCGG	3 cut(s)	505, 800, 977
MspR9I	CCNGG	1 cut(s)	801
MunI	CAATTG	1 cut(s)	810
Mva1269I	GAATGC	1 cut(s)	1758
MwoI	GCNNNNNNNGC	3 cut(s)	82, 106, 1003
NaeI	GCCGGC	1 cut(s)	506
NciI	CCSGG	1 cut(s)	801
NdeI	CATATG	3 cut(s)	1177, 1543, 1768
NgoMIV	GCCGGC	1 cut(s)	504
NlaIII	CATG	9 cut(s)	69, 363, 1108, 1156, 1427, 1490, 1496, 1634, 1749
NlaIV	GGNNCC	6 cut(s)	171, 493, 1110, 1583, 1719, 1892
NmeAIII	GCCGAG	1 cut(s)	1799
NmuCI	GTSAC	3 cut(s)	739, 1751, 1834
NsbI	TGCGCA	1 cut(s)	101
NsiI	ATGCAT	2 cut(s)	71, 1636
PaeR7I	CTCGAG	1 cut(s)	282
PagI	TCATGA	1 cut(s)	1152
PaqCI	CACCTGC	1 cut(s)	1370
PctI	GAATGC	1 cut(s)	1758
PdiI	GCCGGC	1 cut(s)	506
PdmI	GAANNNNTTC	1 cut(s)	1046
PfeI	GAWTC	3 cut(s)	19, 1145, 1400
PflMI	CCANNNNNTGG	2 cut(s)	694, 1727
PkrI	GCNGC	2 cut(s)	565, 1096
PleI	GAGTC	5 cut(s)	136, 170, 256, 373, 1732
PpsI	GAGTC	5 cut(s)	136, 170, 256, 373, 1732
Ppu21I	YACGTR	1 cut(s)	1244
PspFI	CCCAGC	2 cut(s)	427, 476
PspN4I	GGNNCC	6 cut(s)	171, 493, 1110, 1583, 1719, 1892
PspOMI	GGGCCC	1 cut(s)	1890
PspPI	GGNCC	6 cut(s)	84, 767, 1581, 1600, 1890, 1891
PspXI	VCTCGAGB	1 cut(s)	282
PstI	CTGCAG	1 cut(s)	1794
PstNI	CAGNNNCTG	2 cut(s)	1348, 1838
PsuI	RGATCY	3 cut(s)	169, 1313, 1717
PvuII	CAGCTG	2 cut(s)	76, 1094
RsaI	GTAC	5 cut(s)	288, 358, 465, 733, 793
RsaNI	GTAC	5 cut(s)	287, 357, 464, 732, 792
RseI	CAYNNNNRTG	1 cut(s)	1491
SalI	GTCGAC	1 cut(s)	555
SaqAI	TTAA	7 cut(s)	228, 576, 932, 1262, 1620, 1970, 2005
SatI	GCNGC	2 cut(s)	564, 1095
Sau96I	GGNCC	6 cut(s)	84, 767, 1581, 1600, 1890, 1891
ScaI	AGTACT	1 cut(s)	793
SchI	GAGTC	5 cut(s)	137, 170, 257, 373, 1732
ScrFI	CCNGG	1 cut(s)	801
SduI	GDGCHC	2 cut(s)	1367, 1894
SfaNI	GCATC	3 cut(s)	87, 795, 1897
SfcI	CTRYAG	1 cut(s)	1790
Sfr274I	CTCGAG	1 cut(s)	282
SinI	GGWCC	3 cut(s)	767, 1581, 1600
SlaI	CTCGAG	1 cut(s)	282
SmiMI	CAYNNNNRTG	1 cut(s)	1491
SmlI	CTYRAG	1 cut(s)	282
SmoI	CTYRAG	1 cut(s)	282
SnaBI	TACGTA	1 cut(s)	1244
SsiI	CCGC	7 cut(s)	120, 208, 563, 1670, 1735, 1756, 1888
SspMI	CTAG	3 cut(s)	413, 945, 1875
StyD4I	CCNGG	1 cut(s)	799
TaaI	ACNGT	6 cut(s)	48, 321, 754, 1222, 1276, 1350
TaiI	ACGT	2 cut(s)	1246, 1679
TaqI	TCGA	3 cut(s)	283, 556, 1828
TatI	WGTACW	1 cut(s)	791
TauI	GCSGC	1 cut(s)	566
TfiI	GAWTC	3 cut(s)	19, 1145, 1400
Tru1I	TTAA	7 cut(s)	228, 576, 932, 1262, 1620, 1970, 2005
Tru9I	TTAA	7 cut(s)	228, 576, 932, 1262, 1620, 1970, 2005
TscAI	CASTG	4 cut(s)	759, 1353, 1839, 1909
TseFI	GTSAC	3 cut(s)	739, 1751, 1834
TseI	GCWGC	1 cut(s)	1094
Tsp45I	GTSAC	3 cut(s)	739, 1751, 1834
TspGWI	ACGGA	1 cut(s)	524
TspRI	CASTG	4 cut(s)	759, 1353, 1839, 1909
Van91I	CCANNNNNTGG	2 cut(s)	694, 1727
VneI	GTGCAC	1 cut(s)	1363
VpaK11BI	GGWCC	3 cut(s)	767, 1581, 1600
XapI	RAATTY	6 cut(s)	608, 1024, 1428, 1663, 1693, 1814
XcmI	CCANNNNNNNNNTGG	2 cut(s)	197, 516
XhoI	CTCGAG	1 cut(s)	282
XmiI	GTMKAC	1 cut(s)	556
XmnI	GAANNNNTTC	1 cut(s)	1046
XspI	CTAG	3 cut(s)	413, 945, 1875
ZrmI	AGTACT	1 cut(s)	793
Zsp2I	ATGCAT	2 cut(s)	71, 1636

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.