RH6AG302600

RING-type E3 ubiquitin transferase

Design Primers CRISPR Design

Basic Information

Type: Sequence Only
Biological Identity
rosa_samantha
Unknown
OG0005506
Physical Location & Seq
Reverse (-)
0 .. 0
1 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG302600.1

Sequence Viewer

Length: 2442 bp
ATGGCTCAAGCCACTTGCTTTAAGCACAGGAATAGAGGAGGTGAGATGGACACAGCATCCATAAAATGTCTAATCAATAGCATATCTCGATTGGTTCTTCTAGTTTCATGCCAAACAGTAAAGTCTGTGCCTATTCAGAAGGTTTGCAGAACCATAGCTGATGTATTGAAGCTTTTGAAGCCGTTGCTTGATGAAGTAGTTGATTACAATATACCTTCAGATGACATTCTATTTCAAGAGTGTGAAGAATTGGATATGGCTGTCAATGAAGCTAGGGAATTCATGGAAAACTGGTCTCCAAAGTCGAGCAAACTATTAAGTGCTTTGCGGAGTGAGCCATTGTTGATAAAGATACAAAATTCATCACTCAAGATTTGCTGTACATTAAGTAGATTATTACAGTCATCTTCATCTGCTTCAGGTTTAATGGGTCTACAGGTATTTGCTAACTTCAATATGTCTTCTGCGTATACCATTTTCACAAAAAGTAAAGAGCAATGTATGCAGGAAATTGAACGTTTGAAGCCTGAAAGAGTAACAGAATACTTAGAAGAGGCTCTGAAAAGTCAAACAAAAGATTTCATGCCTTCCATCAAATATCTTATGAAAATTACTGAATTGCTTAGCTTGACTTCCAGCCAAGAACTGTTGAAAGAAAGTATTGCTGTAGAGAAGGAAAGAATTACTGTGGAAGTTCGTGATGTTAGAGGGGAACTAGATCAAATCAACCAAATTGTGATTCTTGTCTCTCATATTCGCGAATGCATGGTTAAAAGTGACCGCATTACCGCATCTGGCATCCCGGTCCCTTCATACTTCCGCTGCCCTTTGTCTTCAGAACTCATTTTGGATCCAGTGATTGTAGCTTCGGGCCAAACATATGAGAGAACTGCCATACAAAAATGGCTTGATCATGGGTTGATTATCTGCCCAATGACCCGTCAGAGGCTGACACATACAAACCTCATTCCCAATTACTCATTCAAAGTTATGGTAGAAAGTTGGTGTCAAGAAAATAATATTAAACTTGCGACGAACTCTGACTGCACTAATGCTATCACTGTCCCATCTCCATTAGGTCACATCTCTCCTGAAGGTTTAGTTCACACAGATACCCAGTACTCCATCCACAGTAGCAATTCGACATCAAGATCCTCTGCCGAAGTTGAGAAGCAAAGAAAGGATGTATCTCCTAGATTGAGTGGAGAAAAGTCCAATGGATGCCCTAGCGGTGAGAAAGACCAGTCATCACCAAAACAGTCATATATTCATAGCAGGAGTGAATCAGCCTCAAGTACTGTTTCCAGTGTTGATTATATGCCTCCAGCATCTATTAAGGTGTCAGGGATATCCAATAAGCATGAAAAGGATAATGAGTTTTCTGGAGAAATTACATCTGAGCATCCTGTTGCTTATGTTCCAAATAAAGAATCAGGAATTTCCCCTGGGCTATCAGGAAAGAAGTCTCACCTTTCCAAAGCAAATGTAGAACTTGCATCATGGCATGACAGCCCTAATTACCCAAACAAACAGCTGCTTCCATTTTCTAGCTCAGAATCTGATGGGTCGACAACAGCATCCCATGTCATGAAATTAGTTGAAGATCTCAAGAGCCAATTGGACGAAGTGCAAACTAGGGCTGCGGAAGAATTGCGGCTTCTTGCAAAGCACAATATGGATAATCGCATTATTATAGGCCAATGTGGTGCTATCACACCCTTGCTTTCGCTGCTATATTCAGAGATGAAGTTAACGCAAGAGCATGCTGTGACAGCTCTTTTGAATTTATCAATTAATGAAGACAATAAGGCCATGATTGCAGAAGCAGGAGCAATTGAACCGCTCATCCATGTTCTGAAAACTGGGAATGATGGTGCCAAAGAAAATTCAGCTGCAGCTTTATTCAGCCTCTCTGTCTTGGATGAATACAAGGCAAAAATTGGCCGTTCTGGTGCAGTGAAGGCCTTGGTTGATCTTCTATGCTCTGGGACTCTTAGAGGGAAGAAAGATGCTGCTACTGCACTGTTTAATCTCTCAATTTTTCATGAAAATAAGGCTCGCCTAGTTCAAGCTGGGGCAGTGAAGTATCTTATTGAGTTGATGGACCCTGACACAGGGATGGCTGACAAGGCTGTTGCTCTTCTGGCAAATTTGTCCACCATTGCAGAGGGTCGCTTAGCAATTGCACGGGGAGGAGGAATTCCATTACTAGTTGAGGTCGTGGAATCAGGCTCTCAGAGGGGAAAGGAAAACTCTGCCTCCATTCTGTTGCAACTGTGCCTTCATAGTCCAAAGTTTTGTACTATGGTTCTTCAGGAAGGAGCTGTCCCTCCCCTGGTCGCTTTATCTCAGTCTGGCAGTCCAAGAGCAAAGGAAAAGGCACAGCAGCTTCTCAGTCACTTCCGGAATCAGAGAGAAGGGGCTATGGGGAAGGGAAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Arm U-box

Protein Analysis

813

Amino Acids

89.02

Weight (kDa)

6.84

Isoelectric Point (pI)

44.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PUB2_N PF25240 18 - 146 2.9e-46 PUB2-like, N-terminal domain
U-box PF04564 269 - 340 1.1e-22 U-box domain
ARM_ARMC5 PF24768 527 - 701 1.1e-09 ARMC5
ARM_PUB PF25598 529 - 803 1.4e-25 Plant U-box protein ARM repeat region
Arm PF00514 560 - 597 7.4e-07 Armadillo/beta-catenin-like repeat
ARM_ARMC5 PF24768 593 - 762 5.4e-13 ARMC5
Arm PF00514 599 - 638 3.6e-06 Armadillo/beta-catenin-like repeat
Arm PF00514 642 - 679 5.2e-06 Armadillo/beta-catenin-like repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1874
AccBSI CCGCTC 1 cut(s) 1843
AccI GTMKAC 3 cut(s) 433, 470, 1568
AccII CGCG 1 cut(s) 759
AccIII TCCGGA 1 cut(s) 2403
AciI CCGC 8 cut(s) 328, 781, 789, 820, 1230, 1643, 1654, 1841
AclI AACGTT 1 cut(s) 517
AclWI GGATC 3 cut(s) 845, 858, 1146
AcoI YGGCCR 1 cut(s) 1942
AcsI RAATTY 7 cut(s) 278, 358, 1437, 1783, 1885, 2149, 2199
AcuI CTGAAG 5 cut(s) 201, 402, 819, 1113, 2297
AfaI GTAC 4 cut(s) 382, 1121, 1297, 2302
AfiI CCNNNNNNNGG 3 cut(s) 945, 2114, 2335
AhlI ACTAGT 1 cut(s) 2209
AjnI CCWGG 2 cut(s) 1444, 2334
AjuI GAANNNNNNNTTGG 4 cut(s) 723, 755, 965, 997
AloI GAACNNNNNNTCC 2 cut(s) 1830, 1862
Alw26I GTCTC 3 cut(s) 300, 751, 1470
AlwI GGATC 3 cut(s) 845, 858, 1146
AlwNI CAGNNNCTG 2 cut(s) 949, 1559
Aor13HI TCCGGA 1 cut(s) 2403
AoxI GGCC 5 cut(s) 871, 1696, 1809, 1942, 1962
ApeKI GCWGC 8 cut(s) 822, 1534, 1640, 1729, 1892, 1895, 2012, 2386
ApoI RAATTY 7 cut(s) 278, 358, 1437, 1783, 1885, 2149, 2199
ArsI GACNNNNNNTTYG 2 cut(s) 1762, 1794
AseI ATTAAT 1 cut(s) 1794
AspS9I GGNCC 3 cut(s) 805, 871, 2104
AsuC2I CCSGG 1 cut(s) 803
AsuHPI GGTGA 4 cut(s) 53, 1242, 1244, 1460
AvaII GGWCC 2 cut(s) 805, 2104
BamHI GGATCC 1 cut(s) 850
BanI GGYRCC 1 cut(s) 1874
BbsI GAAGAC 3 cut(s) 453, 825, 1806
BbvI GCAGC 8 cut(s) 809, 1521, 1627, 1716, 1879, 1907, 1999, 2398
BccI CCATC 8 cut(s) 40, 599, 1075, 1133, 1556, 1865, 2095, 2113
BceAI ACGGC 2 cut(s) 166, 1929
BciT130I CCWGG 2 cut(s) 1446, 2336
BclI TGATCA 1 cut(s) 910
BcnI CCSGG 1 cut(s) 803
BcoDI GTCTC 3 cut(s) 300, 751, 1470
BcuI ACTAGT 1 cut(s) 2209
BfaI CTAG 9 cut(s) 101, 273, 716, 1194, 1227, 1548, 1635, 2063, 2210
BfmI CTRYAG 3 cut(s) 434, 666, 1893
BglII AGATCT 1 cut(s) 1603
BisI GCNGC 9 cut(s) 823, 1535, 1641, 1655, 1730, 1893, 1896, 2013, 2387
BlpI GCTNAGC 2 cut(s) 623, 2176
BlsI GCNGC 9 cut(s) 824, 1536, 1642, 1656, 1731, 1894, 1897, 2014, 2388
BmcAI AGTACT 2 cut(s) 1121, 1297
Bme1390I CCNGG 3 cut(s) 803, 1446, 2336
Bme18I GGWCC 2 cut(s) 805, 2104
BmgT120I GGNCC 3 cut(s) 805, 871, 2104
BmiI GGNNCC 4 cut(s) 807, 852, 1876, 2106
BmrFI CCNGG 3 cut(s) 803, 1446, 2336
BmrI ACTGGG 2 cut(s) 1111, 1872
BmsI GCATC 9 cut(s) 65, 800, 807, 1211, 1337, 1411, 1505, 1586, 1999
BmuI ACTGGG 2 cut(s) 1111, 1872
BpiI GAAGAC 3 cut(s) 453, 825, 1806
BpmI CTGGAG 2 cut(s) 1308, 1404
Bpu1102I GCTNAGC 2 cut(s) 623, 2176
BpuEI CTTGAG 3 cut(s) 353, 1276, 1592
BpuMI CCSGG 1 cut(s) 803
BsaI GGTCTC 1 cut(s) 300
BsaJI CCNNGG 4 cut(s) 1444, 1445, 1965, 2334
BsaWI WCCGGW 1 cut(s) 2403
BsaXI ACNNNNNCTCC 2 cut(s) 2243, 2273
Bsc4I CCNNNNNNNGG 3 cut(s) 945, 2114, 2335
Bse1I ACTGG 6 cut(s) 296, 854, 1117, 1243, 1305, 1867
Bse3DI GCAATG 2 cut(s) 503, 2160
BseAI TCCGGA 1 cut(s) 2403
BseBI CCWGG 2 cut(s) 1446, 2336
BseDI CCNNGG 4 cut(s) 1444, 1445, 1965, 2334
BseLI CCNNNNNNNGG 3 cut(s) 945, 2114, 2335
BseMI GCAATG 2 cut(s) 503, 2160
BseMII CTCAG 5 cut(s) 1389, 1566, 2249, 2363, 2407
BseNI ACTGG 6 cut(s) 296, 854, 1117, 1243, 1305, 1867
BseRI GAGGAG 2 cut(s) 51, 2208
BseXI GCAGC 8 cut(s) 809, 1521, 1627, 1716, 1879, 1907, 1999, 2398
BseYI CCCAGC 1 cut(s) 2072
BsgI GTGCAG 3 cut(s) 1030, 1974, 2004
Bsh1236I CGCG 1 cut(s) 759
BshFI GGCC 5 cut(s) 873, 1698, 1811, 1944, 1964
BshNI GGYRCC 1 cut(s) 1874
BsiSI CCGG 2 cut(s) 803, 2404
BslFI GGGAC 4 cut(s) 791, 1049, 2002, 2312
BslI CCNNNNNNNGG 3 cut(s) 945, 2114, 2335
BsmAI GTCTC 3 cut(s) 300, 751, 1470
BsmFI GGGAC 4 cut(s) 791, 1049, 2002, 2312
BsmI GAATGC 1 cut(s) 767
BsnI GGCC 5 cut(s) 873, 1698, 1811, 1944, 1964
Bso31I GGTCTC 1 cut(s) 300
Bsp13I TCCGGA 1 cut(s) 2403
Bsp1407I TGTACA 1 cut(s) 380
Bsp143I GATC 6 cut(s) 718, 850, 910, 1151, 1603, 1972
Bsp1720I GCTNAGC 2 cut(s) 623, 2176
Bsp68I TCGCGA 1 cut(s) 759
BspACI CCGC 8 cut(s) 328, 781, 789, 820, 1230, 1643, 1654, 1841
BspANI GGCC 5 cut(s) 873, 1698, 1811, 1944, 1964
BspCNI CTCAG 5 cut(s) 1390, 1565, 2248, 2362, 2406
BspEI TCCGGA 1 cut(s) 2403
BspFNI CGCG 1 cut(s) 759
BspHI TCATGA 2 cut(s) 1587, 2044
BspLI GGNNCC 4 cut(s) 807, 852, 1876, 2106
BspMAI CTGCAG 1 cut(s) 1897
BspPI GGATC 3 cut(s) 845, 858, 1146
BspQI GCTCTTC 1 cut(s) 2145
BspT107I GGYRCC 1 cut(s) 1874
BspTNI GGTCTC 1 cut(s) 300
BsrBI CCGCTC 1 cut(s) 1843
BsrDI GCAATG 2 cut(s) 503, 2160
BsrGI TGTACA 1 cut(s) 380
BsrI ACTGG 6 cut(s) 296, 854, 1117, 1243, 1305, 1867
BssECI CCNNGG 4 cut(s) 1444, 1445, 1965, 2334
BssMI GATC 6 cut(s) 718, 850, 910, 1151, 1603, 1972
BssNAI GTATAC 1 cut(s) 471
BssT1I CCWWGG 1 cut(s) 1965
Bst1107I GTATAC 1 cut(s) 471
Bst2UI CCWGG 2 cut(s) 1446, 2336
Bst6I CTCTTC 2 cut(s) 546, 2145
BstAPI GCANNNNNTGC 1 cut(s) 502
BstAUI TGTACA 1 cut(s) 380
BstC8I GCNNGC 2 cut(s) 1764, 2059
BstDEI CTNAG 9 cut(s) 547, 623, 1398, 1552, 1994, 2176, 2235, 2349, 2393
BstENI CCTNNNNNAGG 1 cut(s) 2112
BstFNI CGCG 1 cut(s) 759
BstKTI GATC 6 cut(s) 721, 853, 913, 1154, 1606, 1975
BstMAI GTCTC 3 cut(s) 300, 751, 1470
BstMBI GATC 6 cut(s) 718, 850, 910, 1151, 1603, 1972
BstNI CCWGG 2 cut(s) 1446, 2336
BstNSI RCATGY 1 cut(s) 1766
BstSCI CCNGG 3 cut(s) 801, 1444, 2334
BstSFI CTRYAG 3 cut(s) 434, 666, 1893
BstUI CGCG 1 cut(s) 759
BstV1I GCAGC 8 cut(s) 809, 1521, 1627, 1716, 1879, 1907, 1999, 2398
BstV2I GAAGAC 3 cut(s) 453, 825, 1806
BstX2I RGATCY 3 cut(s) 850, 1151, 1603
BstYI RGATCY 3 cut(s) 850, 1151, 1603
BstZ17I GTATAC 1 cut(s) 471
BsuRI GGCC 5 cut(s) 873, 1698, 1811, 1944, 1964
BtsI GCAGTG 2 cut(s) 1962, 2085
BtsIMutI CAGTG 6 cut(s) 861, 1059, 1312, 1962, 2021, 2085
BtuMI TCGCGA 1 cut(s) 759
Cac8I GCNNGC 2 cut(s) 1764, 2059
CaiI CAGNNNCTG 2 cut(s) 949, 1559
CciI TCATGA 2 cut(s) 1587, 2044
Cfr13I GGNCC 3 cut(s) 805, 871, 2104
Csp6I GTAC 4 cut(s) 381, 1120, 1296, 2301
CviQI GTAC 4 cut(s) 381, 1120, 1296, 2301
DdeI CTNAG 9 cut(s) 547, 623, 1398, 1552, 1994, 2176, 2235, 2349, 2393
DpnI GATC 6 cut(s) 720, 852, 912, 1153, 1605, 1974
DpnII GATC 6 cut(s) 718, 850, 910, 1151, 1603, 1972
EaeI YGGCCR 1 cut(s) 1942
Eam1104I CTCTTC 2 cut(s) 546, 2145
EarI CTCTTC 2 cut(s) 546, 2145
Eco130I CCWWGG 1 cut(s) 1965
Eco147I AGGCCT 1 cut(s) 1964
Eco31I GGTCTC 1 cut(s) 300
Eco32I GATATC 1 cut(s) 1350
Eco47I GGWCC 2 cut(s) 805, 2104
Eco57I CTGAAG 5 cut(s) 201, 402, 819, 1113, 2297
EcoNI CCTNNNNNAGG 1 cut(s) 2112
EcoRI GAATTC 2 cut(s) 278, 2199
EcoRII CCWGG 2 cut(s) 1444, 2334
EcoRV GATATC 1 cut(s) 1350
EcoT14I CCWWGG 1 cut(s) 1965
EcoT22I ATGCAT 1 cut(s) 767
ErhI CCWWGG 1 cut(s) 1965
FaqI GGGAC 4 cut(s) 791, 1049, 2002, 2312
FauNDI CATATG 1 cut(s) 880
FbaI TGATCA 1 cut(s) 910
FblI GTMKAC 3 cut(s) 433, 470, 1568
Fnu4HI GCNGC 9 cut(s) 823, 1535, 1641, 1655, 1730, 1893, 1896, 2013, 2387
Fsp4HI GCNGC 9 cut(s) 823, 1535, 1641, 1655, 1730, 1893, 1896, 2013, 2387
FspBI CTAG 9 cut(s) 101, 273, 716, 1194, 1227, 1548, 1635, 2063, 2210
GluI GCNGC 9 cut(s) 823, 1535, 1641, 1655, 1730, 1893, 1896, 2013, 2387
GsaI CCCAGC 1 cut(s) 2076
GsuI CTGGAG 2 cut(s) 1308, 1404
HaeIII GGCC 5 cut(s) 873, 1698, 1811, 1944, 1964
HapII CCGG 2 cut(s) 803, 2404
HincII GTYRAC 2 cut(s) 1569, 1752
HindII GTYRAC 2 cut(s) 1569, 1752
HindIII AAGCTT 1 cut(s) 170
HinfI GANTC 7 cut(s) 739, 1283, 1430, 1556, 1990, 2225, 2407
HpaI GTTAAC 1 cut(s) 1752
HpaII CCGG 2 cut(s) 803, 2404
HphI GGTGA 4 cut(s) 53, 1242, 1244, 1460
Hpy166II GTNNAC 6 cut(s) 434, 471, 1105, 1569, 1752, 2157
Hpy8I GTNNAC 6 cut(s) 434, 471, 1105, 1569, 1752, 2157
Hpy99I CGWCG 1 cut(s) 1036
HpyCH4IV ACGT 1 cut(s) 517
HpyF3I CTNAG 9 cut(s) 547, 623, 1398, 1552, 1994, 2176, 2235, 2349, 2393
HpySE526I ACGT 1 cut(s) 517
Kpn2I TCCGGA 1 cut(s) 2403
Ksp22I TGATCA 1 cut(s) 910
KspAI GTTAAC 1 cut(s) 1752
Kzo9I GATC 6 cut(s) 718, 850, 910, 1151, 1603, 1972
LguI GCTCTTC 1 cut(s) 2145
LmnI GCTCC 2 cut(s) 1829, 2321
Lsp1109I GCAGC 8 cut(s) 809, 1521, 1627, 1716, 1879, 1907, 1999, 2398
LweI GCATC 9 cut(s) 65, 800, 807, 1211, 1337, 1411, 1505, 1586, 1999
MaeI CTAG 9 cut(s) 101, 273, 716, 1194, 1227, 1548, 1635, 2063, 2210
MaeII ACGT 1 cut(s) 517
MaeIII GTNAC 5 cut(s) 535, 776, 1079, 1768, 2396
MalI GATC 6 cut(s) 720, 852, 912, 1153, 1605, 1974
MbiI CCGCTC 1 cut(s) 1843
MboI GATC 6 cut(s) 718, 850, 910, 1151, 1603, 1972
MfeI CAATTG 3 cut(s) 1616, 1833, 2181
MflI RGATCY 3 cut(s) 850, 1151, 1603
MlyI GAGTC 1 cut(s) 1984
Mph1103I ATGCAT 1 cut(s) 767
MroI TCCGGA 1 cut(s) 2403
MslI CAYNNNNRTG 1 cut(s) 2117
MspA1I CMGCKG 3 cut(s) 822, 1534, 1892
MspI CCGG 2 cut(s) 803, 2404
MspR9I CCNGG 3 cut(s) 803, 1446, 2336
MunI CAATTG 3 cut(s) 1616, 1833, 2181
Mva1269I GAATGC 1 cut(s) 767
MvaI CCWGG 2 cut(s) 1446, 2336
MvnI CGCG 1 cut(s) 759
NciI CCSGG 1 cut(s) 803
NdeI CATATG 1 cut(s) 880
NdeII GATC 6 cut(s) 718, 850, 910, 1151, 1603, 1972
NlaIV GGNNCC 4 cut(s) 807, 852, 1876, 2106
NmuCI GTSAC 4 cut(s) 776, 1079, 1768, 2396
NruI TCGCGA 1 cut(s) 759
NsiI ATGCAT 1 cut(s) 767
NspI RCATGY 1 cut(s) 1766
PaeI GCATGC 1 cut(s) 1766
PagI TCATGA 2 cut(s) 1587, 2044
PasI CCCWGGG 1 cut(s) 1445
PceI AGGCCT 1 cut(s) 1964
PciSI GCTCTTC 1 cut(s) 2145
PctI GAATGC 1 cut(s) 767
PfeI GAWTC 6 cut(s) 739, 1283, 1430, 1556, 2225, 2407
PkrI GCNGC 9 cut(s) 824, 1536, 1642, 1656, 1731, 1894, 1897, 2014, 2388
PleI GAGTC 1 cut(s) 1984
PpsI GAGTC 1 cut(s) 1984
PshBI ATTAAT 1 cut(s) 1794
Psp1406I AACGTT 1 cut(s) 517
Psp6I CCWGG 2 cut(s) 1444, 2334
PspFI CCCAGC 1 cut(s) 2072
PspGI CCWGG 2 cut(s) 1444, 2334
PspN4I GGNNCC 4 cut(s) 807, 852, 1876, 2106
PspPI GGNCC 3 cut(s) 805, 871, 2104
PstI CTGCAG 1 cut(s) 1897
PstNI CAGNNNCTG 2 cut(s) 949, 1559
PsuI RGATCY 3 cut(s) 850, 1151, 1603
PvuII CAGCTG 2 cut(s) 1534, 1892
RruI TCGCGA 1 cut(s) 759
RsaI GTAC 4 cut(s) 382, 1121, 1297, 2302
RsaNI GTAC 4 cut(s) 381, 1120, 1296, 2301
RseI CAYNNNNRTG 1 cut(s) 2117
SalI GTCGAC 1 cut(s) 1567
SapI GCTCTTC 1 cut(s) 2145
SatI GCNGC 9 cut(s) 823, 1535, 1641, 1655, 1730, 1893, 1896, 2013, 2387
Sau3AI GATC 6 cut(s) 718, 850, 910, 1151, 1603, 1972
Sau96I GGNCC 3 cut(s) 805, 871, 2104
ScaI AGTACT 2 cut(s) 1121, 1297
SchI GAGTC 1 cut(s) 1984
ScrFI CCNGG 3 cut(s) 803, 1446, 2336
SfaNI GCATC 9 cut(s) 65, 800, 807, 1211, 1337, 1411, 1505, 1586, 1999
SfcI CTRYAG 3 cut(s) 434, 666, 1893
SinI GGWCC 2 cut(s) 805, 2104
SmiMI CAYNNNNRTG 1 cut(s) 2117
SmlI CTYRAG 4 cut(s) 6, 368, 1291, 1607
SmoI CTYRAG 4 cut(s) 6, 368, 1291, 1607
SpeI ACTAGT 1 cut(s) 2209
SphI GCATGC 1 cut(s) 1766
SseBI AGGCCT 1 cut(s) 1964
SsiI CCGC 8 cut(s) 328, 781, 789, 820, 1230, 1643, 1654, 1841
SspI AATATT 1 cut(s) 1021
SspMI CTAG 9 cut(s) 101, 273, 716, 1194, 1227, 1548, 1635, 2063, 2210
StuI AGGCCT 1 cut(s) 1964
StyD4I CCNGG 3 cut(s) 801, 1444, 2334
StyI CCWWGG 1 cut(s) 1965
TaiI ACGT 1 cut(s) 520
TaqI TCGA 4 cut(s) 88, 305, 1142, 1568
TatI WGTACW 4 cut(s) 380, 1119, 1295, 2300
TauI GCSGC 1 cut(s) 1657
TfiI GAWTC 6 cut(s) 739, 1283, 1430, 1556, 2225, 2407
TscAI CASTG 6 cut(s) 861, 1066, 1312, 1962, 2028, 2085
TseFI GTSAC 4 cut(s) 776, 1079, 1768, 2396
TseI GCWGC 8 cut(s) 822, 1534, 1640, 1729, 1892, 1895, 2012, 2386
Tsp45I GTSAC 4 cut(s) 776, 1079, 1768, 2396
TspRI CASTG 6 cut(s) 861, 1066, 1312, 1962, 2028, 2085
VpaK11BI GGWCC 2 cut(s) 805, 2104
VspI ATTAAT 1 cut(s) 1794
XagI CCTNNNNNAGG 1 cut(s) 2112
XapI RAATTY 7 cut(s) 278, 358, 1437, 1783, 1885, 2149, 2199
XceI RCATGY 1 cut(s) 1766
XmiI GTMKAC 3 cut(s) 433, 470, 1568
XspI CTAG 9 cut(s) 101, 273, 716, 1194, 1227, 1548, 1635, 2063, 2210
ZrmI AGTACT 2 cut(s) 1121, 1297
Zsp2I ATGCAT 1 cut(s) 767
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.