Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000042.1

Orthogroup ID

OG0005506

Physical Location & Seq

Genomic Coordinates Forward (+)

23071 .. 29257

Gene Structure 6187 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000042.1_g000006.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2904 bp

atgctagtcacagatcactctcgtgaatcaagatgggatgagtttggttctttaattgtggctggtggggaaaagtttcaacacccagtgtcctccttagtggctgaattacttgcaattaaggctggtctgggtttggtggtagaacgaagactaaggaatgtagtggtggagtctgattgcttggacgctattcatctacttaattcaaaagagagatgtttggctcctgaaggaggacttgttgaagacattcaaagtaacatggctcttctcaatattactaccatctatcatgttcgacgtgacggaaatatggttgctcgtgcaattgggaattatgtagcccaaaataataggcgtttagtttggttagaggttgggcctgatcggctcatgtcacttatcgttaaagataagactttagccgggttatcagttagggagttgagtatttctccgactttggattctagggaggttggagagtatacactgtgtcaacctcatgatctgtttatggctcaagccacttgctttaagcacaggagtagaggaggtgagatggacacagcatccataaaatgtctaatcaatagcatatctcgattggttcttctagtttcatgccaaacagtaaagtctgtgcctattcagaaggtttacagaaccatagctgatgtattgaagcttttgaagccgttgcttgatgaagtggttgattacaatattccttcagatgacattctatttcaagagtgtgaagaattggatatggctgtcaatgaagctagggaattcatggaaaactggtctccaaagtcgagcaaactattaagtgctttgcggagtgagccattgttgataaagatacaaaattcatcactcaagatttgctgtacattaagtagattattacagtcatcttcatctgcttcaggtttaatgggtctacagcaatgtatgcaggaaattgaacgtttgaagcctgaaagagtaacagaatacttagaagaggctctgaaaagtcaaacaaaagatttcatgccttccatcaaatatcttatgaaaattactgaattgcttagcttgacttccagccaagaactgttgaaagaaagtattgctgtagagaaggaaagaattactgtggaagttcgtgatgttagaggggaactagatcaaatcaaccaaattgtgattcttgtctctcatattcgcgaatgcatggttaaaagtgaccgcattaccgcatctggcatcccggtcccttcatacttccgctgccctttgtcttcagaactcattttggatccggtgattgtagcttcgggccaaacatatgagagaactgccatacaaaaatggcttgatcatgggttgattatctgcccaatgacccgtcagaggctgacacatacaaacctcattcccaattactcattcaaagttatggtagaaagttggtgtcaagaaaataatattaaacttgcgacgaactctgactgcactaatgctatcactgtcccatctccattaggtcacatctctcctgaaggtttaattcacacagatacccagtactccatccacagtagcaattcgacatcaagatcctctgccgaagttgagaagcaaagaaaagatgtatctcctagattgagtggagaaaagtccaatggatgccctagcggtgagaaagaccagtcatcaccaaaacagtcatatattcatagcaggagtgaatcagcctcaagtactgtttccagtgttgattatatgcctccagcatctattaaggtgtcagggatatccaataagcatgaaaaggataatgagttttctggagaaattacatctgagcatcctgttgcttatgttccaaataaagaatcaggaatttcccctgggctatcaggaaagaagtctcacctttccaaaggaaatgtagaactggcatcatggcatgacagccctaattacccaaacaaacagctgcttccattttctagctcagaatctgatggatccacgacagcatcccatgtcatgaaattagttgaagacctcaagagccaattggacgaagtgcaaactagggctgcggaagaattgcggcttcttgcaaagcacaatatggataatcgcattattataggccaatgtgatgctatcacacccttgctttcgctgctatattcagagatgaagttaacgcaagagcatgctgtgacagctcttttgaatttatcaattaatgaagacaataaggccatgattgcagaagcaggagcaattgaaccgctcatccatgttctgaaaactgggaatgatggtgccaaagaaaattcagctgcagctttattcagcctctctgtcttggatgaatacaaggcaaaaattggccgttctggtgcagtgaaggccttggttgatcttctaggctctgggactcttagagggaagaaagatgctgctactgcactgtttaatctctcaatttttcatgaaaataaggctcgcctagttcaagctggggcagtgaagtatcttattgagttgatggaccctgacacagggatggctgacaaggctgttgctcttctggcaaatttgtccaccattgcagaggggcgcttagcaattgcacggggaggaggaattccattactagttgaggtcgtggaatcaggctctcagaggggaaaggaaaactctgcctccattctgttgcaactgtgccttcatagtccaaagttttgtactatggttcttcaggaaggagctgtccctcccctggtcgctttatctcagtctggcagtccaagagcaaaggaaaaggcacagcagcttctcagtcacttccggaatcagagagaaggggctatggggaagggaaaatag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arm U-box

Protein Analysis

967

Amino Acids

106.13

Weight (kDa)

6.35

Isoelectric Point (pI)

46.02

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005506)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G54790 AT3G54790 AT3G54790
fragaria_vesca	FvH4_2g21330 FvH4_2g21330 FvH4_2g21330 FvH4_2g21330
malus_domestica	MD05G1196000.v1.1 MD10G1183200.v1.1
prunus_persica	Prupe.8G222400_v2.0.a1 Prupe.8G222400_v2.0.a1 Prupe.8G222400_v2.0.a1 Prupe.8G222400_v2.0.a1 Prupe.8G222400_v2.0.a1
pyrus_communis	pycom05g18300 pycom10g15830
rosa_chinensis	RchiOBHm_Chr6g0287911
rosa_laevigata	RLG00000012456
rosa_multiflora	Rmu_sc0000042.1_g000006
rosa_roxburghii	Rroxscaffold_7G00180670 Rroxscaffold_7G00180880
rosa_rugosa	Rorug06G0193500 Rorug06G0193500
rosa_samantha	Rh6AG302600 Rh6BG308800 Rh6CG300900 Rh6CG316500 Rh6DG301200
rosa_wichuraiana	Rw6G026150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	2336
AccBSI	CCGCTC	1 cut(s)	2305
AccI	GTMKAC	2 cut(s)	491, 952
AccII	CGCG	1 cut(s)	1221
AccIII	TCCGGA	1 cut(s)	2865
AciI	CCGC	8 cut(s)	847, 1243, 1251, 1282, 1692, 2105, 2116, 2303
AclI	AACGTT	1 cut(s)	979
AclWI	GGATC	5 cut(s)	1307, 1320, 1608, 2022, 2035
AcoI	YGGCCR	1 cut(s)	2404
AcsI	RAATTY	7 cut(s)	797, 877, 1899, 2245, 2347, 2611, 2661
AcuI	CTGAAG	6 cut(s)	252, 720, 921, 1281, 1575, 2759
AdeI	CACNNNGTG	1 cut(s)	88
AfaI	GTAC	4 cut(s)	901, 1583, 1759, 2764
AfiI	CCNNNNNNNGG	4 cut(s)	236, 1407, 2576, 2797
AhlI	ACTAGT	1 cut(s)	2671
AjiI	CACGTC	1 cut(s)	305
AjnI	CCWGG	2 cut(s)	1906, 2796
AjuI	GAANNNNNNNTTGG	4 cut(s)	1185, 1217, 1427, 1459
AleI	CACNNNNGTG	1 cut(s)	21
AloI	GAACNNNNNNTCC	2 cut(s)	2292, 2324
Alw26I	GTCTC	3 cut(s)	819, 1213, 1932
AlwI	GGATC	5 cut(s)	1307, 1320, 1608, 2022, 2035
AlwNI	CAGNNNCTG	2 cut(s)	1411, 2021
Aor13HI	TCCGGA	1 cut(s)	2865
AoxI	GGCC	6 cut(s)	383, 1333, 2158, 2271, 2404, 2424
ApeKI	GCWGC	8 cut(s)	1284, 1996, 2102, 2191, 2354, 2357, 2474, 2848
ApoI	RAATTY	7 cut(s)	797, 877, 1899, 2245, 2347, 2611, 2661
ArsI	GACNNNNNNTTYG	2 cut(s)	2224, 2256
AseI	ATTAAT	1 cut(s)	2256
Asp700I	GAANNNNTTC	2 cut(s)	75, 252
AspLEI	GCGC	1 cut(s)	2637
AspS9I	GGNCC	4 cut(s)	383, 1267, 1333, 2566
AsuC2I	CCSGG	2 cut(s)	430, 1265
AsuHPI	GGTGA	5 cut(s)	572, 1330, 1704, 1706, 1922
AvaII	GGWCC	2 cut(s)	1267, 2566
BamHI	GGATCC	2 cut(s)	1312, 2027
BanI	GGYRCC	1 cut(s)	2336
BauI	CACGAG	2 cut(s)	21, 324
BbsI	GAAGAC	5 cut(s)	157, 255, 1287, 2070, 2268
BbvI	GCAGC	8 cut(s)	1271, 1983, 2089, 2178, 2341, 2369, 2461, 2860
BceAI	ACGGC	2 cut(s)	685, 2391
BciT130I	CCWGG	2 cut(s)	1908, 2798
BclI	TGATCA	1 cut(s)	1372
BcnI	CCSGG	2 cut(s)	430, 1265
BcoDI	GTCTC	3 cut(s)	819, 1213, 1932
BcuI	ACTAGT	1 cut(s)	2671
BfmI	CTRYAG	3 cut(s)	953, 1128, 2355
BfoI	RGCGCY	1 cut(s)	2638
BglI	GCCNNNNNGGC	1 cut(s)	391
BisI	GCNGC	9 cut(s)	1285, 1997, 2103, 2117, 2192, 2355, 2358, 2475, 2849
BlpI	GCTNAGC	2 cut(s)	1085, 2638
BlsI	GCNGC	9 cut(s)	1286, 1998, 2104, 2118, 2193, 2356, 2359, 2476, 2850
BmcAI	AGTACT	2 cut(s)	1583, 1759
Bme1390I	CCNGG	4 cut(s)	430, 1265, 1908, 2798
Bme18I	GGWCC	2 cut(s)	1267, 2566
BmgBI	CACGTC	1 cut(s)	305
BmgT120I	GGNCC	4 cut(s)	383, 1267, 1333, 2566
BmiI	GGNNCC	6 cut(s)	228, 1269, 1314, 2029, 2338, 2568
BmrFI	CCNGG	4 cut(s)	430, 1265, 1908, 2798
BmrI	ACTGGG	3 cut(s)	80, 1573, 2334
BmuI	ACTGGG	3 cut(s)	80, 1573, 2334
BpiI	GAAGAC	5 cut(s)	157, 255, 1287, 2070, 2268
BplI	GAGNNNNNCTC	2 cut(s)	442, 474
BpmI	CTGGAG	2 cut(s)	1770, 1866
Bpu1102I	GCTNAGC	2 cut(s)	1085, 2638
BpuEI	CTTGAG	4 cut(s)	510, 872, 1738, 2054
BpuMI	CCSGG	2 cut(s)	430, 1265
BsaI	GGTCTC	1 cut(s)	819
BsaJI	CCNNGG	4 cut(s)	1906, 1907, 2427, 2796
BsaWI	WCCGGW	2 cut(s)	1315, 2865
BsaXI	ACNNNNNCTCC	4 cut(s)	228, 258, 2705, 2735
Bsc4I	CCNNNNNNNGG	4 cut(s)	236, 1407, 2576, 2797
Bse1I	ACTGG	7 cut(s)	86, 815, 1579, 1705, 1767, 1959, 2329
Bse3DI	GCAATG	2 cut(s)	965, 2622
BseAI	TCCGGA	1 cut(s)	2865
BseBI	CCWGG	2 cut(s)	1908, 2798
BseDI	CCNNGG	4 cut(s)	1906, 1907, 2427, 2796
BseLI	CCNNNNNNNGG	4 cut(s)	236, 1407, 2576, 2797
BseMI	GCAATG	2 cut(s)	965, 2622
BseMII	CTCAG	5 cut(s)	1851, 2028, 2711, 2825, 2869
BseNI	ACTGG	7 cut(s)	86, 815, 1579, 1705, 1767, 1959, 2329
BseRI	GAGGAG	2 cut(s)	570, 2670
BseXI	GCAGC	8 cut(s)	1271, 1983, 2089, 2178, 2341, 2369, 2461, 2860
BseYI	CCCAGC	1 cut(s)	2534
BsgI	GTGCAG	3 cut(s)	1492, 2436, 2466
Bsh1236I	CGCG	1 cut(s)	1221
BshFI	GGCC	6 cut(s)	385, 1335, 2160, 2273, 2406, 2426
BshNI	GGYRCC	1 cut(s)	2336
BsiSI	CCGG	4 cut(s)	429, 1265, 1316, 2866
BslFI	GGGAC	4 cut(s)	1253, 1511, 2464, 2774
BslI	CCNNNNNNNGG	4 cut(s)	236, 1407, 2576, 2797
BsmAI	GTCTC	3 cut(s)	819, 1213, 1932
BsmFI	GGGAC	4 cut(s)	1253, 1511, 2464, 2774
BsmI	GAATGC	1 cut(s)	1229
BsnI	GGCC	6 cut(s)	385, 1335, 2160, 2273, 2406, 2426
Bso31I	GGTCTC	1 cut(s)	819
Bsp13I	TCCGGA	1 cut(s)	2865
Bsp1407I	TGTACA	1 cut(s)	899
Bsp143I	GATC	9 cut(s)	13, 388, 511, 1180, 1312, 1372, 1613, 2027, 2434
Bsp1720I	GCTNAGC	2 cut(s)	1085, 2638
Bsp68I	TCGCGA	1 cut(s)	1221
BspACI	CCGC	8 cut(s)	847, 1243, 1251, 1282, 1692, 2105, 2116, 2303
BspANI	GGCC	6 cut(s)	385, 1335, 2160, 2273, 2406, 2426
BspCNI	CTCAG	5 cut(s)	1852, 2027, 2710, 2824, 2868
BspEI	TCCGGA	1 cut(s)	2865
BspFNI	CGCG	1 cut(s)	1221
BspHI	TCATGA	3 cut(s)	508, 2049, 2506
BspLI	GGNNCC	6 cut(s)	228, 1269, 1314, 2029, 2338, 2568
BspMAI	CTGCAG	1 cut(s)	2359
BspPI	GGATC	5 cut(s)	1307, 1320, 1608, 2022, 2035
BspQI	GCTCTTC	2 cut(s)	276, 2607
BspT107I	GGYRCC	1 cut(s)	2336
BspTNI	GGTCTC	1 cut(s)	819
BsrBI	CCGCTC	1 cut(s)	2305
BsrDI	GCAATG	2 cut(s)	965, 2622
BsrGI	TGTACA	1 cut(s)	899
BsrI	ACTGG	7 cut(s)	86, 815, 1579, 1705, 1767, 1959, 2329
BssECI	CCNNGG	4 cut(s)	1906, 1907, 2427, 2796
BssMI	GATC	9 cut(s)	13, 388, 511, 1180, 1312, 1372, 1613, 2027, 2434
BssNAI	GTATAC	1 cut(s)	492
BssSI	CACGAG	2 cut(s)	21, 324
BssT1I	CCWWGG	1 cut(s)	2427
Bst1107I	GTATAC	1 cut(s)	492
Bst2BI	CACGAG	2 cut(s)	21, 324
Bst2UI	CCWGG	2 cut(s)	1908, 2798
Bst6I	CTCTTC	3 cut(s)	276, 1008, 2607
BstAPI	GCANNNNNTGC	1 cut(s)	964
BstAUI	TGTACA	1 cut(s)	899
BstC8I	GCNNGC	2 cut(s)	2226, 2521
BstENI	CCTNNNNNAGG	2 cut(s)	234, 2574
BstFNI	CGCG	1 cut(s)	1221
BstH2I	RGCGCY	1 cut(s)	2638
BstHHI	GCGC	1 cut(s)	2637
BstKTI	GATC	9 cut(s)	16, 391, 514, 1183, 1315, 1375, 1616, 2030, 2437
BstMAI	GTCTC	3 cut(s)	819, 1213, 1932
BstMBI	GATC	9 cut(s)	13, 388, 511, 1180, 1312, 1372, 1613, 2027, 2434
BstNI	CCWGG	2 cut(s)	1908, 2798
BstNSI	RCATGY	1 cut(s)	2228
BstSCI	CCNGG	4 cut(s)	428, 1263, 1906, 2796
BstSFI	CTRYAG	3 cut(s)	953, 1128, 2355
BstUI	CGCG	1 cut(s)	1221
BstV1I	GCAGC	8 cut(s)	1271, 1983, 2089, 2178, 2341, 2369, 2461, 2860
BstV2I	GAAGAC	5 cut(s)	157, 255, 1287, 2070, 2268
BstX2I	RGATCY	3 cut(s)	1312, 1613, 2027
BstYI	RGATCY	3 cut(s)	1312, 1613, 2027
BstZ17I	GTATAC	1 cut(s)	492
BsuRI	GGCC	6 cut(s)	385, 1335, 2160, 2273, 2406, 2426
BtrI	CACGTC	1 cut(s)	305
BtsI	GCAGTG	2 cut(s)	2424, 2547
BtsIMutI	CAGTG	7 cut(s)	93, 494, 1521, 1774, 2424, 2483, 2547
BtuMI	TCGCGA	1 cut(s)	1221
Cac8I	GCNNGC	2 cut(s)	2226, 2521
CaiI	CAGNNNCTG	2 cut(s)	1411, 2021
CciI	TCATGA	3 cut(s)	508, 2049, 2506
CfoI	GCGC	1 cut(s)	2637
Cfr13I	GGNCC	4 cut(s)	383, 1267, 1333, 2566
CseI	GACGC	1 cut(s)	197
Csp6I	GTAC	4 cut(s)	900, 1582, 1758, 2763
CviQI	GTAC	4 cut(s)	900, 1582, 1758, 2763
DpnI	GATC	9 cut(s)	15, 390, 513, 1182, 1314, 1374, 1615, 2029, 2436
DpnII	GATC	9 cut(s)	13, 388, 511, 1180, 1312, 1372, 1613, 2027, 2434
DraIII	CACNNNGTG	1 cut(s)	88
EaeI	YGGCCR	1 cut(s)	2404
Eam1104I	CTCTTC	3 cut(s)	276, 1008, 2607
EarI	CTCTTC	3 cut(s)	276, 1008, 2607
Eco130I	CCWWGG	1 cut(s)	2427
Eco147I	AGGCCT	1 cut(s)	2426
Eco31I	GGTCTC	1 cut(s)	819
Eco32I	GATATC	1 cut(s)	1812
Eco47I	GGWCC	2 cut(s)	1267, 2566
Eco57I	CTGAAG	6 cut(s)	252, 720, 921, 1281, 1575, 2759
EcoNI	CCTNNNNNAGG	2 cut(s)	234, 2574
EcoRI	GAATTC	2 cut(s)	797, 2661
EcoRII	CCWGG	2 cut(s)	1906, 2796
EcoRV	GATATC	1 cut(s)	1812
EcoT14I	CCWWGG	1 cut(s)	2427
EcoT22I	ATGCAT	1 cut(s)	1229
ErhI	CCWWGG	1 cut(s)	2427
FalI	AAGNNNNNCTT	2 cut(s)	225, 257
FaqI	GGGAC	4 cut(s)	1253, 1511, 2464, 2774
FauNDI	CATATG	1 cut(s)	1342
FbaI	TGATCA	1 cut(s)	1372
FblI	GTMKAC	2 cut(s)	491, 952
Fnu4HI	GCNGC	9 cut(s)	1285, 1997, 2103, 2117, 2192, 2355, 2358, 2475, 2849
Fsp4HI	GCNGC	9 cut(s)	1285, 1997, 2103, 2117, 2192, 2355, 2358, 2475, 2849
GlaI	GCGC	1 cut(s)	2636
GluI	GCNGC	9 cut(s)	1285, 1997, 2103, 2117, 2192, 2355, 2358, 2475, 2849
GsaI	CCCAGC	1 cut(s)	2538
GsuI	CTGGAG	2 cut(s)	1770, 1866
HaeII	RGCGCY	1 cut(s)	2638
HaeIII	GGCC	6 cut(s)	385, 1335, 2160, 2273, 2406, 2426
HapII	CCGG	4 cut(s)	429, 1265, 1316, 2866
HgaI	GACGC	1 cut(s)	197
HhaI	GCGC	1 cut(s)	2637
Hin6I	GCGC	1 cut(s)	2635
HinP1I	GCGC	1 cut(s)	2635
HincII	GTYRAC	2 cut(s)	503, 2214
HindII	GTYRAC	2 cut(s)	503, 2214
HindIII	AAGCTT	1 cut(s)	689
HpaI	GTTAAC	1 cut(s)	2214
HpaII	CCGG	4 cut(s)	429, 1265, 1316, 2866
HphI	GGTGA	5 cut(s)	572, 1330, 1704, 1706, 1922
Hpy166II	GTNNAC	6 cut(s)	492, 503, 664, 953, 2214, 2619
Hpy8I	GTNNAC	6 cut(s)	492, 503, 664, 953, 2214, 2619
Hpy99I	CGWCG	2 cut(s)	306, 1498
HpyCH4IV	ACGT	2 cut(s)	304, 979
HpySE526I	ACGT	2 cut(s)	304, 979
HspAI	GCGC	1 cut(s)	2635
Kpn2I	TCCGGA	1 cut(s)	2865
Ksp22I	TGATCA	1 cut(s)	1372
KspAI	GTTAAC	1 cut(s)	2214
Kzo9I	GATC	9 cut(s)	13, 388, 511, 1180, 1312, 1372, 1613, 2027, 2434
LguI	GCTCTTC	2 cut(s)	276, 2607
LmnI	GCTCC	3 cut(s)	232, 2291, 2783
Lsp1109I	GCAGC	8 cut(s)	1271, 1983, 2089, 2178, 2341, 2369, 2461, 2860
MaeII	ACGT	2 cut(s)	304, 979
MaeIII	GTNAC	9 cut(s)	7, 260, 305, 399, 997, 1238, 1541, 2230, 2858
MalI	GATC	9 cut(s)	15, 390, 513, 1182, 1314, 1374, 1615, 2029, 2436
MbiI	CCGCTC	1 cut(s)	2305
MboI	GATC	9 cut(s)	13, 388, 511, 1180, 1312, 1372, 1613, 2027, 2434
MfeI	CAATTG	4 cut(s)	330, 2078, 2295, 2643
MflI	RGATCY	3 cut(s)	1312, 1613, 2027
MlyI	GAGTC	2 cut(s)	182, 2446
MmeI	TCCRAC	2 cut(s)	463, 485
Mph1103I	ATGCAT	1 cut(s)	1229
MroI	TCCGGA	1 cut(s)	2865
MroXI	GAANNNNTTC	2 cut(s)	75, 252
MslI	CAYNNNNRTG	2 cut(s)	21, 2579
MspA1I	CMGCKG	3 cut(s)	1284, 1996, 2354
MspI	CCGG	4 cut(s)	429, 1265, 1316, 2866
MspR9I	CCNGG	4 cut(s)	430, 1265, 1908, 2798
MunI	CAATTG	4 cut(s)	330, 2078, 2295, 2643
Mva1269I	GAATGC	1 cut(s)	1229
MvaI	CCWGG	2 cut(s)	1908, 2798
MvnI	CGCG	1 cut(s)	1221
NciI	CCSGG	2 cut(s)	430, 1265
NdeI	CATATG	1 cut(s)	1342
NdeII	GATC	9 cut(s)	13, 388, 511, 1180, 1312, 1372, 1613, 2027, 2434
NlaIV	GGNNCC	6 cut(s)	228, 1269, 1314, 2029, 2338, 2568
NmuCI	GTSAC	7 cut(s)	7, 305, 399, 1238, 1541, 2230, 2858
NruI	TCGCGA	1 cut(s)	1221
NsiI	ATGCAT	1 cut(s)	1229
NspI	RCATGY	1 cut(s)	2228
OliI	CACNNNNGTG	1 cut(s)	21
PaeI	GCATGC	1 cut(s)	2228
PagI	TCATGA	3 cut(s)	508, 2049, 2506
PasI	CCCWGGG	1 cut(s)	1907
PceI	AGGCCT	1 cut(s)	2426
PciSI	GCTCTTC	2 cut(s)	276, 2607
PctI	GAATGC	1 cut(s)	1229
PdmI	GAANNNNTTC	2 cut(s)	75, 252
PfeI	GAWTC	8 cut(s)	26, 470, 1201, 1745, 1892, 2018, 2687, 2869
PkrI	GCNGC	9 cut(s)	1286, 1998, 2104, 2118, 2193, 2356, 2359, 2476, 2850
PleI	GAGTC	2 cut(s)	181, 2446
PpsI	GAGTC	2 cut(s)	181, 2446
PshBI	ATTAAT	1 cut(s)	2256
Psp1406I	AACGTT	1 cut(s)	979
Psp6I	CCWGG	2 cut(s)	1906, 2796
PspFI	CCCAGC	1 cut(s)	2534
PspGI	CCWGG	2 cut(s)	1906, 2796
PspN4I	GGNNCC	6 cut(s)	228, 1269, 1314, 2029, 2338, 2568
PspPI	GGNCC	4 cut(s)	383, 1267, 1333, 2566
PstI	CTGCAG	1 cut(s)	2359
PstNI	CAGNNNCTG	2 cut(s)	1411, 2021
PsuI	RGATCY	3 cut(s)	1312, 1613, 2027
PvuII	CAGCTG	2 cut(s)	1996, 2354
RruI	TCGCGA	1 cut(s)	1221
RsaI	GTAC	4 cut(s)	901, 1583, 1759, 2764
RsaNI	GTAC	4 cut(s)	900, 1582, 1758, 2763
RseI	CAYNNNNRTG	2 cut(s)	21, 2579
SapI	GCTCTTC	2 cut(s)	276, 2607
SatI	GCNGC	9 cut(s)	1285, 1997, 2103, 2117, 2192, 2355, 2358, 2475, 2849
Sau3AI	GATC	9 cut(s)	13, 388, 511, 1180, 1312, 1372, 1613, 2027, 2434
Sau96I	GGNCC	4 cut(s)	383, 1267, 1333, 2566
ScaI	AGTACT	2 cut(s)	1583, 1759
SchI	GAGTC	2 cut(s)	182, 2446
ScrFI	CCNGG	4 cut(s)	430, 1265, 1908, 2798
SfcI	CTRYAG	3 cut(s)	953, 1128, 2355
SinI	GGWCC	2 cut(s)	1267, 2566
SmiMI	CAYNNNNRTG	2 cut(s)	21, 2579
SmlI	CTYRAG	4 cut(s)	525, 887, 1753, 2069
SmoI	CTYRAG	4 cut(s)	525, 887, 1753, 2069
SpeI	ACTAGT	1 cut(s)	2671
SphI	GCATGC	1 cut(s)	2228
SseBI	AGGCCT	1 cut(s)	2426
SsiI	CCGC	8 cut(s)	847, 1243, 1251, 1282, 1692, 2105, 2116, 2303
SspI	AATATT	3 cut(s)	280, 730, 1483
StuI	AGGCCT	1 cut(s)	2426
StyD4I	CCNGG	4 cut(s)	428, 1263, 1906, 2796
StyI	CCWWGG	1 cut(s)	2427
TaiI	ACGT	2 cut(s)	307, 982
TaqI	TCGA	4 cut(s)	301, 607, 824, 1604
TatI	WGTACW	4 cut(s)	899, 1581, 1757, 2762
TauI	GCSGC	1 cut(s)	2119
TfiI	GAWTC	8 cut(s)	26, 470, 1201, 1745, 1892, 2018, 2687, 2869
TscAI	CASTG	7 cut(s)	93, 501, 1528, 1774, 2424, 2490, 2547
TseFI	GTSAC	7 cut(s)	7, 305, 399, 1238, 1541, 2230, 2858
TseI	GCWGC	8 cut(s)	1284, 1996, 2102, 2191, 2354, 2357, 2474, 2848
Tsp45I	GTSAC	7 cut(s)	7, 305, 399, 1238, 1541, 2230, 2858
TspGWI	ACGGA	1 cut(s)	324
TspRI	CASTG	7 cut(s)	93, 501, 1528, 1774, 2424, 2490, 2547
VpaK11BI	GGWCC	2 cut(s)	1267, 2566
VspI	ATTAAT	1 cut(s)	2256
XagI	CCTNNNNNAGG	2 cut(s)	234, 2574
XapI	RAATTY	7 cut(s)	797, 877, 1899, 2245, 2347, 2611, 2661
XceI	RCATGY	1 cut(s)	2228
XmiI	GTMKAC	2 cut(s)	491, 952
XmnI	GAANNNNTTC	2 cut(s)	75, 252
ZrmI	AGTACT	2 cut(s)	1583, 1759
Zsp2I	ATGCAT	1 cut(s)	1229

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.