Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0005770

Physical Location & Seq

Genomic Coordinates Reverse (-)

20535631 .. 20539138

Gene Structure 3508 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G55400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1851 bp

ATGGCGGCGAGGATAAACACTTCGCTTCATAACGCCCTCTCTTTTTTAAAGCCTTTTAACACTCCCCTCAATACCAAACCATTCTCTTTTAGAAGAAACAGCTTCAGATTTTCCAAAAAGCTTCCTTATTATTCTCAGTTTTCCTCAGGGAAGAGAGCTCTCTATTGCACTTCCAGTTCCCAGGAAAGTACCGTCGATGAAGGCGAGACATTTGTCCTCACCACTCCTCTTTATTACGTTAATGCCCCTCCCCACATGGGTAGTGCTTACACCACTATCGCCGCCGATTCAATTGCTCGTTTCCAGAGACTGCTTGGTAAGAAGGTTATCTTTATCACAGGAACAGATGAACATGGTGAGAAGATAGCTACTTCAGCAGCTGCTAATGGACGTAATCCTCCTGAACATTGTGACCTCATTTCTCAATCTTATAGAACTCTTTGGAAAGATCTCGATATAGCTTATGACAAATTCATTAGAACTACTGATCCTAAGCATGAAGCTATTGTAAAAGAGTTCTACGCTCGTGTTTTCGCAAACGGTGATATTTACAGAGCTGATTATGAAGGTCTTTACTGTGTTAACTGCGAGGAATATAAGGATGAGAAAGAGTTGCTTGAAAACAATTGTTGCCCTGTCCATCAAATGCCATGTGTTGCAAGGAAAGAAGATAACTACTTCTTTGCTTTGTCGAAATATCAGAAACCACTTGAAGACATTTTGGCCCAGAATCCTCGTTTTGTGCAGCCTTCGTATCGTCTTAATGAGGTACAAAGTTGGATAAAGAGTGGCTTAAGAGATTTTTCCATTTCTCGAGCATTAGTGGATTGGGGAATTCCTGTTCCCGACGACGATAAGCAAACCATATATGTTTGGTTTGATGCTCTACTTGGTTACATATCAGCTCTAACAGAGGACAACAAACAACAAAATCTAGAAACTGCTGTTTCATTTGGCTGGCCTGCTTCATTGCATTTGATCGGAAAGGATATTCTACGATTTCACGCTGTCTACTGGCCTGCCATGCTAATGTCTGCTGGTCTTGAACTTCCCAAGATGGTGTTTGGCCATGGGTTTCTGACAAAGGATGGAATGAAGATGGGAAAATCGTTGGGGAATACTCTAGAACCGTTTGAGTTGGTTCAGAAATTTGGGCCAGATGCCGTGAGGTATTTCTTCCTACGGGAGGTTGAATTTGGAAACGATGGGGACTATTCAGAAGACCGATTTATAAAAATCGTCAATGCACATCTCGCCAACACTATAGGAAATCTTCTTAACCGTACTCTTGGTCTTCTTAAAAAGAACTGTGAATCCACTTTAGTGGTAGACTCGACAGTTGCAGCCGAAGGAGTTCCTTTGAAAGACACAGTGGAGAAGCTGGTTGAGAAGGCTAGGACAAACTATGAAAATCTGTCACTATCATCAGCGTGTGAAGCTGTTTTAGAGATTGGAAATGCGGGAAATACCTACATGGATCAACGAGCACCATGGTTTCTGTTCAAACAAGGTGGTGTCTCAGCAGAAGAGGCAGCCAAGGATCTGGTGATTATACTGGAAGTAATGAGAGTCATAGCGGTTGCGTTATCCCCCGTTGCACCTTGCCTAAGTCTGAGGATCTATTCACAGCTTGGCTATACAGAGGATCAATTCAATAGCATAACCTGGAGTGACACCAAATGGGGAGGGCTAAAGGGAGGACAAGTAATGGAGCAAGCGAGTCCCGTATTTGCAAGGATCGAGCTGAATCCAGAGAAAGAAGAAGATGAGAAGAAGCCAAAGGTTGGTAAGAAAACTGGCAAAGCCAAGGTCAAAGTAGTAGAGCAAACTCCTACAGTAGCTGAAGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004812 GO:0004825 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006431 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009791 GO:0009908 GO:0009987 GO:0010467 GO:0016070 GO:0016874 GO:0016875 GO:0019538 GO:0019752 GO:0022414 GO:0032501 GO:0032502 GO:0034641 GO:0034645 GO:0034660 GO:0035670 GO:0043038 GO:0043039 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048467 GO:0048481 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0061458 GO:0071704 GO:0090304 GO:0090567 GO:0099402 GO:0140098 GO:0140101 GO:1901360 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00450 ko00970 map00450 map00970

Pfam Domains

Protein Families

Anticodon_1 tRNA-synt_1g

Protein Analysis

616

Amino Acids

69.27

Weight (kDa)

6.15

Isoelectric Point (pI)

31.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
tRNA-synt_1	PF00133	65 - 282	1.3e-11	tRNA synthetases class I (I, L, M and V)
tRNA-synt_1g	PF09334	72 - 210	4.3e-41	tRNA synthetases class I (M)
tRNA-synt_1e	PF01406	83 - 238	1.5e-06	tRNA synthetases class I (C) catalytic domain
tRNA-synt_1g	PF09334	205 - 430	8.6e-64	tRNA synthetases class I (M)
tRNA-synt_1	PF00133	286 - 396	4e-10	tRNA synthetases class I (I, L, M and V)
Anticodon_3	PF19303	452 - 583	9.7e-10	Anticodon binding domain of methionyl tRNA ligase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005770)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G55400 AT3G55400
fragaria_vesca	FvH4_6g24170 FvH4_6g24170 FvH4_6g51210 FvH4_6g51210 FvH4_6g51210 FvH4_6g51210
malus_domestica	MD01G1125100.v1.1 MD07G1194800.v1.1
prunus_persica	Prupe.2G232400_v2.0.a1 Prupe.2G232400_v2.0.a1
pyrus_communis	pycom01g15130 pycom07g18350 pycom07g18360
rosa_chinensis	RchiOBHm_Chr3g0482991 RchiOBHm_Chr3g0483011
rosa_laevigata	RLG00000023307 RLG00000023309
rosa_multiflora	Rmu_sc0003351.1_g000014
rosa_roxburghii	Rroxscaffold_6G00398740
rosa_rugosa	Rorug03G0202800
rosa_samantha	Rh3AG251600 Rh3BG288100 Rh3CG285600 Rh3DG281300
rosa_wichuraiana	Rw3G022730 Rw3G022760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1232
AccB7I	CCANNNNNTGG	1 cut(s)	1784
AccI	GTMKAC	2 cut(s)	1011, 1329
AciI	CCGC	4 cut(s)	5, 282, 1460, 1577
AclWI	GGATC	6 cut(s)	482, 1485, 1548, 1625, 1653, 1745
AcoI	YGGCCR	1 cut(s)	1066
AcsI	RAATTY	4 cut(s)	470, 834, 1148, 1193
AcuI	CTGAAG	2 cut(s)	88, 357
AfaI	GTAC	3 cut(s)	190, 771, 1285
AfiI	CCNNNNNNNGG	3 cut(s)	257, 1186, 1784
AflII	CTTAAG	1 cut(s)	793
AgsI	TTSAA	8 cut(s)	291, 620, 713, 1046, 1193, 1363, 1504, 1654
AjnI	CCWGG	2 cut(s)	180, 1664
AleI	CACNNNNGTG	1 cut(s)	1322
AloI	GAACNNNNNNTCC	6 cut(s)	472, 504, 825, 857, 1298, 1330
Alw21I	GWGCWC	2 cut(s)	160, 1489
Alw26I	GTCTC	3 cut(s)	200, 301, 1522
AlwI	GGATC	6 cut(s)	482, 1485, 1548, 1625, 1653, 1745
AlwNI	CAGNNNCTG	3 cut(s)	310, 380, 1841
Ama87I	CYCGRG	1 cut(s)	813
AoxI	GGCC	5 cut(s)	723, 959, 1016, 1066, 1154
ApeKI	GCWGC	5 cut(s)	377, 380, 745, 1343, 1532
ApoI	RAATTY	4 cut(s)	470, 834, 1148, 1193
ArsI	GACNNNNNNTTYG	2 cut(s)	1794, 1826
Asp700I	GAANNNNTTC	1 cut(s)	1353
AspS9I	GGNCC	2 cut(s)	724, 1154
AsuHPI	GGTGA	4 cut(s)	211, 368, 554, 1558
AvaI	CYCGRG	1 cut(s)	813
AxyI	CCTNAGG	1 cut(s)	145
BalI	TGGCCA	1 cut(s)	1068
BanII	GRGCYC	1 cut(s)	160
BauI	CACGAG	1 cut(s)	525
BbsI	GAAGAC	3 cut(s)	720, 1227, 1286
Bbv12I	GWGCWC	2 cut(s)	160, 1489
BbvI	GCAGC	5 cut(s)	367, 389, 757, 1355, 1544
BccI	CCATC	5 cut(s)	648, 1051, 1082, 1093, 1199
BceAI	ACGGC	1 cut(s)	1148
BcgI	CGANNNNNNTGC	2 cut(s)	275, 309
BciT130I	CCWGG	2 cut(s)	182, 1666
BcoDI	GTCTC	3 cut(s)	200, 301, 1522
BfaI	CTAG	3 cut(s)	935, 1124, 1395
BfmI	CTRYAG	2 cut(s)	1263, 1833
BfrI	CTTAAG	1 cut(s)	793
BglII	AGATCT	1 cut(s)	448
BisI	GCNGC	7 cut(s)	6, 282, 378, 381, 746, 1344, 1533
BlsI	GCNGC	7 cut(s)	7, 283, 379, 382, 747, 1345, 1534
Bme1390I	CCNGG	2 cut(s)	182, 1666
BmeT110I	CYCGRG	1 cut(s)	813
BmgT120I	GGNCC	2 cut(s)	724, 1154
BmrFI	CCNGG	2 cut(s)	182, 1666
BmsI	GCATC	2 cut(s)	871, 1150
BoxI	GACNNNNGTC	1 cut(s)	212
BpiI	GAAGAC	3 cut(s)	720, 1227, 1286
BpmI	CTGGAG	1 cut(s)	1687
Bpu10I	CCTNAGC	1 cut(s)	492
BsaJI	CCNNGG	5 cut(s)	180, 1069, 1490, 1536, 1806
BsaXI	ACNNNNNCTCC	2 cut(s)	1689, 1719
Bsc4I	CCNNNNNNNGG	3 cut(s)	257, 1186, 1784
Bse1I	ACTGG	4 cut(s)	174, 1019, 1560, 1801
Bse21I	CCTNAGG	1 cut(s)	145
Bse3DI	GCAATG	1 cut(s)	968
BseBI	CCWGG	2 cut(s)	182, 1666
BseDI	CCNNGG	5 cut(s)	180, 1069, 1490, 1536, 1806
BseGI	GGATG	2 cut(s)	607, 1093
BseLI	CCNNNNNNNGG	3 cut(s)	257, 1186, 1784
BseMI	GCAATG	1 cut(s)	968
BseMII	CTCAG	4 cut(s)	149, 159, 1533, 1604
BseNI	ACTGG	4 cut(s)	174, 1019, 1560, 1801
BseRI	GAGGAG	1 cut(s)	216
BseXI	GCAGC	5 cut(s)	367, 389, 757, 1355, 1544
BsgI	GTGCAG	1 cut(s)	764
BshFI	GGCC	5 cut(s)	725, 961, 1018, 1068, 1156
BsiHKAI	GWGCWC	2 cut(s)	160, 1489
BsiHKCI	CYCGRG	1 cut(s)	813
BslFI	GGGAC	2 cut(s)	1223, 1707
BslI	CCNNNNNNNGG	3 cut(s)	257, 1186, 1784
BsmAI	GTCTC	3 cut(s)	200, 301, 1522
BsmFI	GGGAC	2 cut(s)	1223, 1707
BsnI	GGCC	5 cut(s)	725, 961, 1018, 1068, 1156
BsoBI	CYCGRG	1 cut(s)	813
Bsp1286I	GDGCHC	2 cut(s)	160, 1489
Bsp143I	GATC	8 cut(s)	448, 487, 978, 1477, 1540, 1617, 1645, 1737
Bsp19I	CCATGG	2 cut(s)	1069, 1490
BspACI	CCGC	4 cut(s)	5, 282, 1460, 1577
BspANI	GGCC	5 cut(s)	725, 961, 1018, 1068, 1156
BspCNI	CTCAG	4 cut(s)	148, 158, 1532, 1605
BspPI	GGATC	6 cut(s)	482, 1485, 1548, 1625, 1653, 1745
BspTI	CTTAAG	1 cut(s)	793
BsrDI	GCAATG	1 cut(s)	968
BsrI	ACTGG	4 cut(s)	174, 1019, 1560, 1801
BssECI	CCNNGG	5 cut(s)	180, 1069, 1490, 1536, 1806
BssMI	GATC	8 cut(s)	448, 487, 978, 1477, 1540, 1617, 1645, 1737
BssSI	CACGAG	1 cut(s)	525
BssT1I	CCWWGG	4 cut(s)	1069, 1490, 1536, 1806
Bst2BI	CACGAG	1 cut(s)	525
Bst2UI	CCWGG	2 cut(s)	182, 1666
Bst4CI	ACNGT	9 cut(s)	193, 542, 578, 1131, 1283, 1310, 1339, 1372, 1837
Bst6I	CTCTTC	2 cut(s)	146, 1521
BstAFI	CTTAAG	1 cut(s)	793
BstC8I	GCNNGC	4 cut(s)	959, 963, 1020, 1716
BstDEI	CTNAG	6 cut(s)	135, 145, 492, 1519, 1607, 1613
BstDSI	CCRYGG	2 cut(s)	1069, 1490
BstENI	CCTNNNNNAGG	1 cut(s)	1184
BstF5I	GGATG	2 cut(s)	607, 1093
BstKTI	GATC	8 cut(s)	451, 490, 981, 1480, 1543, 1620, 1648, 1740
BstMAI	GTCTC	3 cut(s)	200, 301, 1522
BstMBI	GATC	8 cut(s)	448, 487, 978, 1477, 1540, 1617, 1645, 1737
BstMWI	GCNNNNNNNGC	5 cut(s)	374, 1024, 1253, 1436, 1529
BstNI	CCWGG	2 cut(s)	182, 1666
BstPAI	GACNNNNGTC	1 cut(s)	212
BstSCI	CCNGG	2 cut(s)	180, 1664
BstSFI	CTRYAG	2 cut(s)	1263, 1833
BstV1I	GCAGC	5 cut(s)	367, 389, 757, 1355, 1544
BstV2I	GAAGAC	3 cut(s)	720, 1227, 1286
BstX2I	RGATCY	3 cut(s)	448, 1540, 1617
BstXI	CCANNNNNNTGG	2 cut(s)	1324, 1543
BstYI	RGATCY	3 cut(s)	448, 1540, 1617
Bsu36I	CCTNAGG	1 cut(s)	145
BsuRI	GGCC	5 cut(s)	725, 961, 1018, 1068, 1156
BtgI	CCRYGG	2 cut(s)	1069, 1490
BtsCI	GGATG	2 cut(s)	607, 1093
BtsIMutI	CAGTG	1 cut(s)	1377
Cac8I	GCNNGC	4 cut(s)	959, 963, 1020, 1716
CaiI	CAGNNNCTG	3 cut(s)	310, 380, 1841
Cfr13I	GGNCC	2 cut(s)	724, 1154
Csp6I	GTAC	3 cut(s)	189, 770, 1284
CspCI	CAANNNNNGTGG	2 cut(s)	1492, 1527
CviAII	CATG	8 cut(s)	256, 353, 497, 651, 1024, 1070, 1474, 1491
CviQI	GTAC	3 cut(s)	189, 770, 1284
DdeI	CTNAG	6 cut(s)	135, 145, 492, 1519, 1607, 1613
DpnI	GATC	8 cut(s)	450, 489, 980, 1479, 1542, 1619, 1647, 1739
DpnII	GATC	8 cut(s)	448, 487, 978, 1477, 1540, 1617, 1645, 1737
DraI	TTTAAA	1 cut(s)	48
EaeI	YGGCCR	1 cut(s)	1066
Eam1104I	CTCTTC	2 cut(s)	146, 1521
EarI	CTCTTC	2 cut(s)	146, 1521
Ecl136II	GAGCTC	1 cut(s)	158
Eco130I	CCWWGG	4 cut(s)	1069, 1490, 1536, 1806
Eco24I	GRGCYC	1 cut(s)	160
Eco53kI	GAGCTC	1 cut(s)	158
Eco57I	CTGAAG	2 cut(s)	88, 357
Eco81I	CCTNAGG	1 cut(s)	145
Eco88I	CYCGRG	1 cut(s)	813
EcoICRI	GAGCTC	1 cut(s)	158
EcoNI	CCTNNNNNAGG	1 cut(s)	1184
EcoRI	GAATTC	1 cut(s)	834
EcoRII	CCWGG	2 cut(s)	180, 1664
EcoT14I	CCWWGG	4 cut(s)	1069, 1490, 1536, 1806
EcoT38I	GRGCYC	1 cut(s)	160
ErhI	CCWWGG	4 cut(s)	1069, 1490, 1536, 1806
FaeI	CATG	8 cut(s)	259, 356, 500, 654, 1027, 1073, 1477, 1494
FalI	AAGNNNNNCTT	6 cut(s)	314, 346, 600, 632, 776, 808
FaqI	GGGAC	2 cut(s)	1223, 1707
FatI	CATG	8 cut(s)	255, 352, 496, 650, 1023, 1069, 1473, 1490
FauI	CCCGC	1 cut(s)	1453
FblI	GTMKAC	2 cut(s)	1011, 1329
Fnu4HI	GCNGC	7 cut(s)	6, 282, 378, 381, 746, 1344, 1533
FokI	GGATG	2 cut(s)	614, 1100
FriOI	GRGCYC	1 cut(s)	160
Fsp4HI	GCNGC	7 cut(s)	6, 282, 378, 381, 746, 1344, 1533
FspBI	CTAG	3 cut(s)	935, 1124, 1395
GluI	GCNGC	7 cut(s)	6, 282, 378, 381, 746, 1344, 1533
GsuI	CTGGAG	1 cut(s)	1687
HaeIII	GGCC	5 cut(s)	725, 961, 1018, 1068, 1156
Hin1II	CATG	8 cut(s)	259, 356, 500, 654, 1027, 1073, 1477, 1494
HincII	GTYRAC	1 cut(s)	583
HindII	GTYRAC	1 cut(s)	583
HindIII	AAGCTT	2 cut(s)	119, 1845
HinfI	GANTC	7 cut(s)	287, 730, 1313, 1331, 1569, 1720, 1747
HpaI	GTTAAC	1 cut(s)	583
HphI	GGTGA	4 cut(s)	211, 368, 554, 1558
Hpy166II	GTNNAC	3 cut(s)	583, 1012, 1330
Hpy188I	TCNGA	7 cut(s)	107, 702, 983, 1080, 1146, 1219, 1614
Hpy188III	TCNNGA	9 cut(s)	304, 401, 452, 813, 845, 935, 1043, 1124, 1751
Hpy8I	GTNNAC	3 cut(s)	583, 1012, 1330
Hpy99I	CGWCG	3 cut(s)	197, 851, 854
HpyAV	CCTTC	6 cut(s)	194, 316, 560, 759, 1343, 1384
HpyCH4III	ACNGT	9 cut(s)	193, 542, 578, 1131, 1283, 1310, 1339, 1372, 1837
HpyCH4IV	ACGT	2 cut(s)	237, 391
HpyCH4V	TGCA	8 cut(s)	168, 659, 745, 973, 1247, 1343, 1598, 1733
HpyF10VI	GCNNNNNNNGC	5 cut(s)	374, 1024, 1253, 1436, 1529
HpyF3I	CTNAG	6 cut(s)	135, 145, 492, 1519, 1607, 1613
HpySE526I	ACGT	2 cut(s)	237, 391
Hsp92II	CATG	8 cut(s)	259, 356, 500, 654, 1027, 1073, 1477, 1494
KspAI	GTTAAC	1 cut(s)	583
Kzo9I	GATC	8 cut(s)	448, 487, 978, 1477, 1540, 1617, 1645, 1737
LmnI	GCTCC	1 cut(s)	1711
Lsp1109I	GCAGC	5 cut(s)	367, 389, 757, 1355, 1544
LweI	GCATC	2 cut(s)	871, 1150
MaeI	CTAG	3 cut(s)	935, 1124, 1395
MaeII	ACGT	2 cut(s)	237, 391
MaeIII	GTNAC	4 cut(s)	410, 893, 1416, 1670
MalI	GATC	8 cut(s)	450, 489, 980, 1479, 1542, 1619, 1647, 1739
MboI	GATC	8 cut(s)	448, 487, 978, 1477, 1540, 1617, 1645, 1737
MfeI	CAATTG	2 cut(s)	291, 625
MflI	RGATCY	3 cut(s)	448, 1540, 1617
MhlI	GDGCHC	2 cut(s)	160, 1489
MlsI	TGGCCA	1 cut(s)	1068
MluCI	AATT	7 cut(s)	291, 470, 625, 834, 1148, 1193, 1649
MluNI	TGGCCA	1 cut(s)	1068
MlyI	GAGTC	3 cut(s)	1325, 1578, 1729
MmeI	TCCRAC	1 cut(s)	758
Mox20I	TGGCCA	1 cut(s)	1068
MroXI	GAANNNNTTC	1 cut(s)	1353
MscI	TGGCCA	1 cut(s)	1068
MseI	TTAA	9 cut(s)	47, 57, 240, 582, 762, 794, 1278, 1299, 1849
MslI	CAYNNNNRTG	3 cut(s)	1028, 1322, 1429
Msp20I	TGGCCA	1 cut(s)	1068
MspA1I	CMGCKG	1 cut(s)	380
MspCI	CTTAAG	1 cut(s)	793
MspR9I	CCNGG	2 cut(s)	182, 1666
MunI	CAATTG	2 cut(s)	291, 625
MvaI	CCWGG	2 cut(s)	182, 1666
MwoI	GCNNNNNNNGC	5 cut(s)	374, 1024, 1253, 1436, 1529
NcoI	CCATGG	2 cut(s)	1069, 1490
NdeII	GATC	8 cut(s)	448, 487, 978, 1477, 1540, 1617, 1645, 1737
NlaIII	CATG	8 cut(s)	259, 356, 500, 654, 1027, 1073, 1477, 1494
NmuCI	GTSAC	3 cut(s)	410, 1416, 1670
OliI	CACNNNNGTG	1 cut(s)	1322
PaeR7I	CTCGAG	1 cut(s)	813
PcsI	WCGNNNNNNNCGW	1 cut(s)	201
PdmI	GAANNNNTTC	1 cut(s)	1353
PfeI	GAWTC	4 cut(s)	287, 730, 1313, 1747
PflMI	CCANNNNNTGG	1 cut(s)	1784
PkrI	GCNGC	7 cut(s)	7, 283, 379, 382, 747, 1345, 1534
PleI	GAGTC	3 cut(s)	1325, 1577, 1728
PpsI	GAGTC	3 cut(s)	1325, 1577, 1728
PshAI	GACNNNNGTC	1 cut(s)	212
PsiI	TTATAA	1 cut(s)	1232
Psp124BI	GAGCTC	1 cut(s)	160
Psp6I	CCWGG	2 cut(s)	180, 1664
PspGI	CCWGG	2 cut(s)	180, 1664
PspPI	GGNCC	2 cut(s)	724, 1154
PstNI	CAGNNNCTG	3 cut(s)	310, 380, 1841
PsuI	RGATCY	3 cut(s)	448, 1540, 1617
PvuII	CAGCTG	1 cut(s)	380
RsaI	GTAC	3 cut(s)	190, 771, 1285
RsaNI	GTAC	3 cut(s)	189, 770, 1284
RseI	CAYNNNNRTG	3 cut(s)	1028, 1322, 1429
SacI	GAGCTC	1 cut(s)	160
SaqAI	TTAA	9 cut(s)	47, 57, 240, 582, 762, 794, 1278, 1299, 1849
SatI	GCNGC	7 cut(s)	6, 282, 378, 381, 746, 1344, 1533
Sau3AI	GATC	8 cut(s)	448, 487, 978, 1477, 1540, 1617, 1645, 1737
Sau96I	GGNCC	2 cut(s)	724, 1154
SchI	GAGTC	3 cut(s)	1325, 1578, 1729
ScrFI	CCNGG	2 cut(s)	182, 1666
SduI	GDGCHC	2 cut(s)	160, 1489
SfaNI	GCATC	2 cut(s)	871, 1150
SfcI	CTRYAG	2 cut(s)	1263, 1833
Sfr274I	CTCGAG	1 cut(s)	813
SlaI	CTCGAG	1 cut(s)	813
SmiMI	CAYNNNNRTG	3 cut(s)	1028, 1322, 1429
SmlI	CTYRAG	2 cut(s)	793, 813
SmoI	CTYRAG	2 cut(s)	793, 813
Sse9I	AATT	7 cut(s)	291, 470, 625, 834, 1148, 1193, 1649
SsiI	CCGC	4 cut(s)	5, 282, 1460, 1577
SspMI	CTAG	3 cut(s)	935, 1124, 1395
SstI	GAGCTC	1 cut(s)	160
StyD4I	CCNGG	2 cut(s)	180, 1664
StyI	CCWWGG	4 cut(s)	1069, 1490, 1536, 1806
TaaI	ACNGT	9 cut(s)	193, 542, 578, 1131, 1283, 1310, 1339, 1372, 1837
TaiI	ACGT	2 cut(s)	240, 394
TaqI	TCGA	6 cut(s)	195, 453, 692, 814, 1334, 1740
TaqII	GACCGA	1 cut(s)	1239
TasI	AATT	7 cut(s)	291, 470, 625, 834, 1148, 1193, 1649
TauI	GCSGC	2 cut(s)	8, 284
TfiI	GAWTC	4 cut(s)	287, 730, 1313, 1747
Tru1I	TTAA	9 cut(s)	47, 57, 240, 582, 762, 794, 1278, 1299, 1849
Tru9I	TTAA	9 cut(s)	47, 57, 240, 582, 762, 794, 1278, 1299, 1849
TscAI	CASTG	1 cut(s)	1377
TseFI	GTSAC	3 cut(s)	410, 1416, 1670
TseI	GCWGC	5 cut(s)	377, 380, 745, 1343, 1532
Tsp45I	GTSAC	3 cut(s)	410, 1416, 1670
TspRI	CASTG	1 cut(s)	1377
Van91I	CCANNNNNTGG	1 cut(s)	1784
Vha464I	CTTAAG	1 cut(s)	793
XagI	CCTNNNNNAGG	1 cut(s)	1184
XapI	RAATTY	4 cut(s)	470, 834, 1148, 1193
XbaI	TCTAGA	2 cut(s)	934, 1123
XcmI	CCANNNNNNNNNTGG	1 cut(s)	311
XhoI	CTCGAG	1 cut(s)	813
XmiI	GTMKAC	2 cut(s)	1011, 1329
XmnI	GAANNNNTTC	1 cut(s)	1353
XspI	CTAG	3 cut(s)	935, 1124, 1395

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.